| Clone Name | bags21e13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY884167.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA, complete cds Length = 1622 Score = 375 bits (189), Expect = e-100 Identities = 432/513 (84%) Strand = Plus / Plus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 104 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 163 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 164 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 223 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggttt 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct: 224 cagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggatt 283 Query: 264 gttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagctaggtgg 323 |||||||||| ||||||||||||| ||||||||||| || | ||||| || || ||||| Sbjct: 284 gttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtgg 343 Query: 324 caatgataagcatgtcattagccgcgagtccagagaagtagccatcccaccacatttgat 383 || | ||||||||| | | | || ||||| ||||| |||||||||||| |||| Sbjct: 344 cagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgat 403 Query: 384 gtcagggagctcctctgaattgtttgctttcattgcttccgaattagccaagtttgtgac 443 |||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||| | Sbjct: 404 gtcagggacctcctcggaattgtttggtttcattgctggggaattaggcaagtttgttgc 463 Query: 444 tgatgaagagaagggcactagcttgtcaaacgggaagaaactagaattaggattcacatt 503 ||| || ||| |||| ||| | || ||||||| ||||| ||| |||||||||| || Sbjct: 464 tgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcacctt 523 Query: 504 ttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtggacaaaggc 563 ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 524 ctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggc 583 Query: 564 attttctatagaagatgctgtaggtaaagatgt 596 ||||| || || ||||| |||||| ||||||| Sbjct: 584 gttttccattgatgatgcagtaggtgaagatgt 616
>dbj|AK099119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038N14, full insert sequence Length = 1634 Score = 375 bits (189), Expect = e-100 Identities = 432/513 (84%) Strand = Plus / Plus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 85 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 144 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 145 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 204 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggttt 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct: 205 cagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggatt 264 Query: 264 gttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagctaggtgg 323 |||||||||| ||||||||||||| ||||||||||| || | ||||| || || ||||| Sbjct: 265 gttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtgg 324 Query: 324 caatgataagcatgtcattagccgcgagtccagagaagtagccatcccaccacatttgat 383 || | ||||||||| | | | || ||||| ||||| |||||||||||| |||| Sbjct: 325 cagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgat 384 Query: 384 gtcagggagctcctctgaattgtttgctttcattgcttccgaattagccaagtttgtgac 443 |||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||| | Sbjct: 385 gtcagggacctcctcggaattgtttggtttcattgctggggaattaggcaagtttgttgc 444 Query: 444 tgatgaagagaagggcactagcttgtcaaacgggaagaaactagaattaggattcacatt 503 ||| || ||| |||| ||| | || ||||||| ||||| ||| |||||||||| || Sbjct: 445 tgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcacctt 504 Query: 504 ttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtggacaaaggc 563 ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 505 ctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggc 564 Query: 564 attttctatagaagatgctgtaggtaaagatgt 596 ||||| || || ||||| |||||| ||||||| Sbjct: 565 gttttccattgatgatgcagtaggtgaagatgt 597
>dbj|AK064011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G12, full insert sequence Length = 1868 Score = 375 bits (189), Expect = e-100 Identities = 432/513 (84%) Strand = Plus / Plus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 296 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 355 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 356 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 415 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggttt 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct: 416 cagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggatt 475 Query: 264 gttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagctaggtgg 323 |||||||||| ||||||||||||| ||||||||||| || | ||||| || || ||||| Sbjct: 476 gttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtgg 535 Query: 324 caatgataagcatgtcattagccgcgagtccagagaagtagccatcccaccacatttgat 383 || | ||||||||| | | | || ||||| ||||| |||||||||||| |||| Sbjct: 536 cagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgat 595 Query: 384 gtcagggagctcctctgaattgtttgctttcattgcttccgaattagccaagtttgtgac 443 |||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||| | Sbjct: 596 gtcagggacctcctcggaattgtttggtttcattgctggggaattaggcaagtttgttgc 655 Query: 444 tgatgaagagaagggcactagcttgtcaaacgggaagaaactagaattaggattcacatt 503 ||| || ||| |||| ||| | || ||||||| ||||| ||| |||||||||| || Sbjct: 656 tgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcacctt 715 Query: 504 ttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtggacaaaggc 563 ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 716 ctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggc 775 Query: 564 attttctatagaagatgctgtaggtaaagatgt 596 ||||| || || ||||| |||||| ||||||| Sbjct: 776 gttttccattgatgatgcagtaggtgaagatgt 808
>gb|DQ116390.1| Oryza sativa (japonica cultivar-group) hexokinase 8 (HXK8) mRNA, complete cds Length = 1835 Score = 367 bits (185), Expect = 3e-98 Identities = 431/513 (84%) Strand = Plus / Plus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| |||| | |||||||||||| Sbjct: 279 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgcgggcgtcgctgctgcg 338 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 339 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 398 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggttt 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct: 399 cagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggatt 458 Query: 264 gttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagctaggtgg 323 |||||||||| ||||||||||||| ||||||||||| || | ||||| || || ||||| Sbjct: 459 gttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtgg 518 Query: 324 caatgataagcatgtcattagccgcgagtccagagaagtagccatcccaccacatttgat 383 || | ||||||||| | | | || ||||| ||||| |||||||||||| |||| Sbjct: 519 cagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgat 578 Query: 384 gtcagggagctcctctgaattgtttgctttcattgcttccgaattagccaagtttgtgac 443 |||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||| | Sbjct: 579 gtcagggacctcctcggaattgtttggtttcattgctggggaattaggcaagtttgttgc 638 Query: 444 tgatgaagagaagggcactagcttgtcaaacgggaagaaactagaattaggattcacatt 503 ||| || ||| |||| ||| | || ||||||| ||||| ||| |||||||||| || Sbjct: 639 tgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcacctt 698 Query: 504 ttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtggacaaaggc 563 ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 699 ctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggc 758 Query: 564 attttctatagaagatgctgtaggtaaagatgt 596 ||||| || || ||||| |||||| ||||||| Sbjct: 759 gttttccattgatgatgcagtaggtgaagatgt 791
>ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1800 Score = 359 bits (181), Expect = 7e-96 Identities = 430/513 (83%) Strand = Plus / Plus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 438 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 497 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 498 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 557 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggttt 263 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct: 558 cagggtcaagatgctgctctcctacgtcgacaagctccccactgggagagaggatggatt 617 Query: 264 gttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagctaggtgg 323 |||||||||| ||||||||||||| ||||||||||| || | ||||| || || ||||| Sbjct: 618 gttctatggattggacctaggaggaacaaacttccgggtgctcaaggttcatcttggtgg 677 Query: 324 caatgataagcatgtcattagccgcgagtccagagaagtagccatcccaccacatttgat 383 || | ||||||||| | | | || ||||| ||||| |||||||||||| |||| Sbjct: 678 cagcaagaagcatgtcgtcaactctgaatccagggaagtcagcatcccaccacacctgat 737 Query: 384 gtcagggagctcctctgaattgtttgctttcattgcttccgaattagccaagtttgtgac 443 |||||||| |||| |||||||||| |||||||||| ||||||| ||||||||| | Sbjct: 738 gtcagggacctcccaggaattgtttggtttcattgctggggaattaggcaagtttgttgc 797 Query: 444 tgatgaagagaagggcactagcttgtcaaacgggaagaaactagaattaggattcacatt 503 ||| || ||| |||| ||| | || ||||||| ||||| ||| |||||||||| || Sbjct: 798 tgaagaggaggagggtactgacatgccaaacggcaagaagaaagagctaggattcacctt 857 Query: 504 ttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtggacaaaggc 563 ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 858 ctcttttcctgtgaggcaacgatctgtggcatcgggtacccttgtcaagtggacaaaggc 917 Query: 564 attttctatagaagatgctgtaggtaaagatgt 596 ||||| || || ||||| |||||| ||||||| Sbjct: 918 gttttccattgatgatgcagtaggtgaagatgt 950
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 4821834 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 4821775 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 4821774 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 4821715 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccac 245 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4821714 cagggtcaagatgctgctctcctacgtcgacaagctccccac 4821673 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Minus Query: 400 gaattgtttgctttcattgcttccgaattagccaagtttgtgactgatgaagagaagggc 459 |||||||||| |||||||||| ||||||| ||||||||| |||| || ||| |||| Sbjct: 4821254 gaattgtttggtttcattgctggggaattaggcaagtttgttgctgaagaggaggagggt 4821195 Query: 460 actagcttgtcaaacgggaagaaactagaattaggattcacattttctttcccagtgagg 519 ||| | || ||||||| ||||| ||| |||||||||| || ||||| || |||||| Sbjct: 4821194 actgacatgccaaacggcaagaagaaagagctaggattcaccttctcttttcctgtgagg 4821135 Query: 520 caacggtctgttgcatcagggacccttgtcaagtggacaaaggcattttc 569 ||||| ||||| ||||| || ||||||||||||||||||||||| ||||| Sbjct: 4821134 caacgatctgtggcatcgggtacccttgtcaagtggacaaaggcgttttc 4821085 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 248 ggagagaggacggtttgttctatggactggacctaggagggacaaacttccg 299 |||||||||| || |||||||||||| ||||||||||||| ||||||||||| Sbjct: 4821525 ggagagaggatggattgttctatggattggacctaggaggaacaaacttccg 4821474 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 209 tcaagatgctgctctcctacgtcgacaagctccccaccggg 249 |||||||||||||| ||| ||||||| |||||||| |||| Sbjct: 41306355 tcaagatgctgctcaccttcgtcgacgcgctccccagcggg 41306315 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 31006755 ctacgtcgacaacctccccaccggg 31006731
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctgacctgcgggagaagtgcgacacgcccgtgtcgctgctgcg 143 ||||||| || ||||||| || |||||||||| ||||| ||||| | |||||||||||| Sbjct: 66483 ggcggagaaggtggtggcggagctgcgggagaggtgcgcgacgccggcgtcgctgctgcg 66424 Query: 144 cgacgtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggag 203 || ||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| Sbjct: 66423 ggatgtggcggcggcgatggccggcgagatgggcgccggcctggagaaggagggtgggag 66364 Query: 204 cagggtcaagatgctgctctcctacgtcgacaagctccccac 245 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 66363 cagggtcaagatgctgctctcctacgtcgacaagctccccac 66322 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Minus Query: 400 gaattgtttgctttcattgcttccgaattagccaagtttgtgactgatgaagagaagggc 459 |||||||||| |||||||||| ||||||| ||||||||| |||| || ||| |||| Sbjct: 65903 gaattgtttggtttcattgctggggaattaggcaagtttgttgctgaagaggaggagggt 65844 Query: 460 actagcttgtcaaacgggaagaaactagaattaggattcacattttctttcccagtgagg 519 ||| | || ||||||| ||||| ||| |||||||||| || ||||| || |||||| Sbjct: 65843 actgacatgccaaacggcaagaagaaagagctaggattcaccttctcttttcctgtgagg 65784 Query: 520 caacggtctgttgcatcagggacccttgtcaagtggacaaaggcattttc 569 ||||| ||||| ||||| || ||||||||||||||||||||||| ||||| Sbjct: 65783 caacgatctgtggcatcgggtacccttgtcaagtggacaaaggcgttttc 65734 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 248 ggagagaggacggtttgttctatggactggacctaggagggacaaacttccg 299 |||||||||| || |||||||||||| ||||||||||||| ||||||||||| Sbjct: 66174 ggagagaggatggattgttctatggattggacctaggaggaacaaacttccg 66123
>ref|XM_476073.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 538 gggacccttgtcaagtggacaaaggcattttctatagaagatgctgtaggtaaagatgt 596 ||||| ||| |||||||||| ||||| |||||||| || |||||||||||| ||||||| Sbjct: 673 gggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaggtgaagatgt 731 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 88 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 147 Query: 208 gtcaagatgctgctctcctacgtcgacaagctcccca 244 |||||||| | | |||||||||||||| ||||||| Sbjct: 148 atcaagatgatcgtttcctacgtcgacaacctcccca 184
>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA, complete cds Length = 1816 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 538 gggacccttgtcaagtggacaaaggcattttctatagaagatgctgtaggtaaagatgt 596 ||||| ||| |||||||||| ||||| |||||||| || |||||||||||| ||||||| Sbjct: 567 gggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaggtgaagatgt 625 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 180 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 239 Query: 208 gtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggtttgttc 267 |||||||| | | |||||||||||||| ||||||| |||| || || || |||||| Sbjct: 240 atcaagatgatcgtttcctacgtcgacaacctccccaatgggaccgaagagggcttgttc 299 Query: 268 tatggactggacctaggagggacaaacttccgagtc 303 || | ||||| || || || ||||||||||||||| Sbjct: 300 tacgcgctggatcttgggggaacaaacttccgagtc 335
>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA, complete cds Length = 1652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 538 gggacccttgtcaagtggacaaaggcattttctatagaagatgctgtaggtaaagatgt 596 ||||| ||| |||||||||| ||||| |||||||| || |||||||||||| ||||||| Sbjct: 557 gggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaggtgaagatgt 615 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 170 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 229 Query: 208 gtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggtttgttc 267 |||||||| | | |||||||||||||| ||||||| |||| || || || |||||| Sbjct: 230 atcaagatgatcgtttcctacgtcgacaacctccccaatgggaccgaagagggcttgttc 289 Query: 268 tatggactggacctaggagggacaaacttccgagtc 303 || | ||||| || || || ||||||||||||||| Sbjct: 290 tacgcgctggatcttgggggaacaaacttccgagtc 325
>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full insert sequence Length = 1777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 538 gggacccttgtcaagtggacaaaggcattttctatagaagatgctgtaggtaaagatgt 596 ||||| ||| |||||||||| ||||| |||||||| || |||||||||||| ||||||| Sbjct: 603 gggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaggtgaagatgt 661 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 216 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 275 Query: 208 gtcaagatgctgctctcctacgtcgacaagctccccaccgggagagaggacggtttgttc 267 |||||||| | | |||||||||||||| ||||||| |||| || || || |||||| Sbjct: 276 atcaagatgatcgtttcctacgtcgacaacctccccaatgggaccgaagagggcttgttc 335 Query: 268 tatggactggacctaggagggacaaacttccgagtc 303 || | ||||| || || || ||||||||||||||| Sbjct: 336 tacgcgctggatcttgggggaacaaacttccgagtc 371
>gb|AY553215.2| Nicotiana tabacum hexokinase 2 (Hxk2) mRNA, complete cds Length = 2300 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 486 agaattaggattcacattttctttcccagtga 517 |||| ||||||||||||||||||||||||||| Sbjct: 838 agaaataggattcacattttctttcccagtga 869 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 259 ggtttgttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagcta 318 ||||||||||||| | ||||||| || || ||||| |||||||| || | |||||| || Sbjct: 611 ggtttgttctatgcattggaccttggtggtacaaatttccgagtgttaagagtgcagtta 670 Query: 319 ggtgg 323 ||||| Sbjct: 671 ggtgg 675
>gb|AY664407.1| Nicotiana sylvestris hexokinase 2 (Hxk2) gene, partial cds Length = 3567 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 259 ggtttgttctatggactggacctaggagggacaaacttccgagtcttgaaggtgcagcta 318 ||||||||||||| | ||||||| || || ||||| |||||||| || | ||||||| || Sbjct: 542 ggtttgttctatgcattggaccttggtggtacaaatttccgagtgttaagggtgcagtta 601 Query: 319 ggtgg 323 ||||| Sbjct: 602 ggtgg 606 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 491 taggattcacattttctttcccagtga 517 |||||||||||||||| |||||||||| Sbjct: 860 taggattcacattttccttcccagtga 886
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 5284547 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 5284488 Query: 208 gtcaagatgctgctctcctacgtcgacaagctcccca 244 |||||||| | | |||||||||||||| ||||||| Sbjct: 5284487 atcaagatgatcgtttcctacgtcgacaacctcccca 5284451 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccggg 249 |||||||| || ||||||||||||| |||||||||||| Sbjct: 25817433 aagatgctcatcacctacgtcgacaacctccccaccggg 25817471
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 148 gtggcggcggccatggccgacgagatgtgcgccgggctggagaaggagggtgggagcagg 207 ||||||||||| ||||||| ||||||| || ||| ||| | ||||||| || |||| | Sbjct: 21248 gtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaag 21189 Query: 208 gtcaagatgctgctctcctacgtcgacaagctcccca 244 |||||||| | | |||||||||||||| ||||||| Sbjct: 21188 atcaagatgatcgtttcctacgtcgacaacctcccca 21152
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03, complete sequence Length = 101218 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccggg 249 |||||||| || ||||||||||||| |||||||||||| Sbjct: 88727 aagatgctcatcacctacgtcgacaacctccccaccggg 88765
>ref|XM_463697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 209 tcaagatgctgctctcctacgtcgacaagctccccaccgggag 251 |||||||||||||| ||| ||||||| |||||||| |||||| Sbjct: 233 tcaagatgctgctcaccttcgtcgacgcgctccccagcgggag 275
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccggg 249 |||||||| || ||||||||||||| |||||||||||| Sbjct: 51375 aagatgctcatcacctacgtcgacaacctccccaccggg 51413
>gb|DQ116385.1| Oryza sativa (japonica cultivar-group) hexokinase 3 (HXK3) mRNA, complete cds Length = 1692 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 209 tcaagatgctgctctcctacgtcgacaagctccccaccgggag 251 |||||||||||||| ||| ||||||| |||||||| |||||| Sbjct: 351 tcaagatgctgctcaccttcgtcgacgcgctccccagcgggag 393
>gb|AY884171.1| Oryza sativa (japonica cultivar-group) hexokinase 8 (HXK8) mRNA, complete cds Length = 1725 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 209 tcaagatgctgctctcctacgtcgacaagctccccaccgggag 251 |||||||||||||| ||| ||||||| |||||||| |||||| Sbjct: 249 tcaagatgctgctcaccttcgtcgacgcgctccccagcgggag 291
>ref|XM_532991.2| PREDICTED: Canis familiaris similar to hexokinase 2 (LOC475781), mRNA Length = 2930 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 ctggacctaggagggacaaacttccg 299 |||||||| ||||||||||||||||| Sbjct: 223 ctggaccttggagggacaaacttccg 248
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 gctgctgcgcgacgtggcggcg 156 |||||||||||||||||||||| Sbjct: 88872 gctgctgcgcgacgtggcggcg 88893
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 gctgctgcgcgacgtggcggcg 156 |||||||||||||||||||||| Sbjct: 7314 gctgctgcgcgacgtggcggcg 7335
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 gctgctgcgcgacgtggcggcg 156 |||||||||||||||||||||| Sbjct: 341013 gctgctgcgcgacgtggcggcg 340992
>gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase 5 (HXK5) mRNA, complete cds Length = 2058 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccgg 248 |||||||| || ||||||||||||| ||||||||||| Sbjct: 412 aagatgctcatcacctacgtcgacaacctccccaccgg 449
>gb|AF454961.1|AF454961 Brassica oleracea hexokinase (HXK1) mRNA, complete cds Length = 1750 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 ctggacctaggagggacaaacttccg 299 |||||||||||||| ||||||||||| Sbjct: 317 ctggacctaggaggaacaaacttccg 342
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 cgctgctgcgcgacgtggcggcggcc 159 ||||||||||||| |||||||||||| Sbjct: 43787 cgctgctgcgcgaggtggcggcggcc 43762 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 catggccgacgagatgtgcg 178 |||||||||||||||||||| Sbjct: 67181 catggccgacgagatgtgcg 67162
>gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds Length = 1965 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccgg 248 |||||||| || ||||||||||||| ||||||||||| Sbjct: 293 aagatgctcatcacctacgtcgacaacctccccaccgg 330
>dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F14, full insert sequence Length = 2033 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 211 aagatgctgctctcctacgtcgacaagctccccaccgg 248 |||||||| || ||||||||||||| ||||||||||| Sbjct: 402 aagatgctcatcacctacgtcgacaacctccccaccgg 439
>emb|AJ318065.1|PVI318065 Pseudorabies virus ul39 gene (partial), ul36 gene, ul37 gene and ul38 gene (partial) Length = 6126 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 134 cgctgctgcgcgacgtggcggcggcc 159 ||||||||||||| |||||||||||| Sbjct: 3783 cgctgctgcgcgaggtggcggcggcc 3808
>ref|NM_119057.2| Arabidopsis thaliana ATHXK1 (GLUCOSE INSENSITIVE 2); ATP binding / hexokinase AT4G29130 (ATHXK1) mRNA, complete cds Length = 3209 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 537 tggacctaggggggacaaacttccg 561
>ref|NM_191156.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 273 ctacgtcgacaacctccccaccggg 297
>gb|AY553218.1| Nicotiana tabacum hexokinase 4b (Hxk4b) mRNA, complete cds Length = 1568 Score = 42.1 bits (21), Expect = 2.1 Identities = 84/105 (80%) Strand = Plus / Plus Query: 496 ttcacattttctttcccagtgaggcaacggtctgttgcatcagggacccttgtcaagtgg 555 ||||| || ||||||||||| | |||| ||| |||||||||| || ||| | || ||| Sbjct: 560 ttcaccttctctttcccagttaaacaactgtcaattgcatcaggaactcttattaaatgg 619 Query: 556 acaaaggcattttctatagaagatgctgtaggtaaagatgttgtt 600 ||||||| || |||||||| ||||| || || ||||||||||| Sbjct: 620 acaaagggcttctctatagatgatgcggttggccaagatgttgtt 664
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete sequence Length = 192494 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 ctggagaaggagggtgggagc 204 ||||||||||||||||||||| Sbjct: 52124 ctggagaaggagggtgggagc 52144
>emb|AL035666.7|HS730D4 Human DNA sequence from clone RP4-730D4 on chromosome 20q12 Contains a pseudogene similar to part of ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit) (oligomycin sensitivity conferring protein) (ATP5O), complete sequence Length = 47334 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 aggagggtgggagcagggtca 211 ||||||||||||||||||||| Sbjct: 29141 aggagggtgggagcagggtca 29121
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 82022 tggacctaggggggacaaacttccg 81998
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 65549 tggacctaggggggacaaacttccg 65525
>gb|AY124809.1| Arabidopsis thaliana AT4g29130/F19B15_160 mRNA, complete cds Length = 1491 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 299 tggacctaggggggacaaacttccg 323
>gb|DQ116388.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA, complete cds Length = 2070 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 429 ctacgtcgacaacctccccaccggg 453
>gb|AY075658.1| Arabidopsis thaliana AT4g29130/F19B15_160 mRNA, complete cds Length = 2019 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 525 tggacctaggggggacaaacttccg 549
>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2, complete sequence Length = 233488 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctga 104 ||||||||||||||||||||| Sbjct: 229742 ggcggagcagctggtggctga 229722
>ref|XM_679067.1| PREDICTED: Danio rerio similar to CG1399-PB, isoform B (LOC556302), mRNA Length = 4239 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctga 104 ||||||||||||||||||||| Sbjct: 3848 ggcggagcagctggtggctga 3828
>emb|BX828055.1|CNS0A3VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1899 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 534 tggacctaggggggacaaacttccg 558
>emb|BX827978.1|CNS0A3VW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1880 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 523 tggacctaggggggacaaacttccg 547
>emb|BX827436.1|CNS0A2DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1984 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 504 tggacctaggggggacaaacttccg 528
>gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complete sequence Length = 131132 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 ctggagaaggagggtgggagc 204 ||||||||||||||||||||| Sbjct: 46275 ctggagaaggagggtgggagc 46255
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 209 tcaagatgctgctctcctacgtcgacaagctccccaccggg 249 |||||||||||||| ||| ||||||| |||||||| |||| Sbjct: 123270 tcaagatgctgctcaccttcgtcgacgcgctccccagcggg 123230
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 63734 ctacgtcgacaacctccccaccggg 63710
>gb|AY884165.1| Oryza sativa (japonica cultivar-group) hexokinase 2 (HXK2) mRNA, complete cds Length = 1955 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 306 ctacgtcgacaacctccccaccggg 330
>gb|U18754.2|ATU18754 Arabidopsis thaliana hexokinase mRNA, complete cds Length = 1953 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 459 tggacctaggggggacaaacttccg 483
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 acgtcgacaagctccccaccg 247 ||||||||||||||||||||| Sbjct: 2487846 acgtcgacaagctccccaccg 2487866
>emb|BX000706.10| Zebrafish DNA sequence from clone CH211-204D18 in linkage group 2, complete sequence Length = 95120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctga 104 ||||||||||||||||||||| Sbjct: 77712 ggcggagcagctggtggctga 77692
>dbj|AK065656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039E17, full insert sequence Length = 2156 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 ctacgtcgacaagctccccaccggg 249 |||||||||||| |||||||||||| Sbjct: 459 ctacgtcgacaacctccccaccggg 483
>emb|CR855311.15| Zebrafish DNA sequence from clone DKEY-97I18 in linkage group 16, complete sequence Length = 161379 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 tttccccttgatctgccggcc 58 ||||||||||||||||||||| Sbjct: 42777 tttccccttgatctgccggcc 42757
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 gaagatgctgtaggtaaagat 594 ||||||||||||||||||||| Sbjct: 764430 gaagatgctgtaggtaaagat 764410
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggcggagcagctggtggctga 104 ||||||||||||||||||||| Sbjct: 3674064 ggcggagcagctggtggctga 3674044
>gb|U28214.1|ATU28214 Arabidopsis thaliana hexokinase 1 (AtHXK1) mRNA, complete cds Length = 2023 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 tggacctaggagggacaaacttccg 299 |||||||||| |||||||||||||| Sbjct: 496 tggacctaggggggacaaacttccg 520
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tttcccagtgaggcaacggt 526 |||||||||||||||||||| Sbjct: 1279949 tttcccagtgaggcaacggt 1279968
>ref|XM_472429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2634 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tgtgcgccgggctggagaaggagg 196 ||||||||| |||||||||||||| Sbjct: 1859 tgtgcgccgcgctggagaaggagg 1882
>gb|BC084554.1| Homo sapiens mesoderm development candidate 1, mRNA (cDNA clone MGC:99595 IMAGE:6088754), complete cds Length = 1927 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcagctggtggctgacctgc 109 |||||||||||||||||||| Sbjct: 309 gcagctggtggctgacctgc 328
>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence Length = 172393 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 cggcggccatggccgacgagatgt 175 |||||||||||||| ||||||||| Sbjct: 12995 cggcggccatggccaacgagatgt 13018
>gb|AC008231.4| Drosophila melanogaster clone BACR12O13, complete sequence Length = 177339 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 cggcggccatggccgacgagatgt 175 |||||||||||||| ||||||||| Sbjct: 129843 cggcggccatggccaacgagatgt 129866
>ref|XM_872288.1| PREDICTED: Bos taurus similar to zinc finger protein 42 isoform 2, transcript variant 4 (LOC523865), mRNA Length = 2465 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ctggagaaggagggtgggagcagg 207 ||||||||||||||||||| |||| Sbjct: 686 ctggagaaggagggtgggatcagg 663
>gb|BC001442.2| Homo sapiens ring finger protein 126, transcript variant 1, mRNA (cDNA clone MGC:1022 IMAGE:3138961), complete cds Length = 1431 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 74 gtggcggcggccatggccga 93
>gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosome 14, complete sequence Length = 167869 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 ctgtaggtaaagatgttgtt 600 |||||||||||||||||||| Sbjct: 90650 ctgtaggtaaagatgttgtt 90669
>ref|NM_194460.1| Homo sapiens ring finger protein 126 (RNF126), transcript variant 2, mRNA Length = 1658 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 95 gtggcggcggccatggccga 114
>ref|NM_017876.3| Homo sapiens ring finger protein 126 (RNF126), transcript variant 1, mRNA Length = 1457 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 95 gtggcggcggccatggccga 114
>ref|NM_022566.1| Homo sapiens mesoderm development candidate 1 (MESDC1), mRNA Length = 2411 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcagctggtggctgacctgc 109 |||||||||||||||||||| Sbjct: 772 gcagctggtggctgacctgc 791
>ref|NM_016642.1| Homo sapiens spectrin, beta, non-erythrocytic 5 (SPTBN5), mRNA Length = 11722 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gagcagctggtggctgacct 107 |||||||||||||||||||| Sbjct: 1162 gagcagctggtggctgacct 1181
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gcggccatggccgacgagat 173 |||||||||||||||||||| Sbjct: 27171 gcggccatggccgacgagat 27152
>ref|XM_536376.2| PREDICTED: Canis familiaris similar to Hexokinase, type I (HK I) (Brain form hexokinase) (LOC479234), mRNA Length = 3222 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ggattcacattttctttccc 512 |||||||||||||||||||| Sbjct: 919 ggattcacattttctttccc 938
>emb|AL731544.11| Human DNA sequence from clone RP11-514F8 on chromosome 10 Contains the 3' end of the gene for a novel SH2 domain-containing protein, a novel gene and a CpG island, complete sequence Length = 98873 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gggctggagaaggagggtgg 200 |||||||||||||||||||| Sbjct: 93440 gggctggagaaggagggtgg 93421
>emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chromosome 1 Contains part of a novel gene, complete sequence Length = 178121 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ggagggtgggagcagggtca 211 |||||||||||||||||||| Sbjct: 80918 ggagggtgggagcagggtca 80899
>emb|AL157783.15| Human DNA sequence from clone RP11-134A8 on chromosome 10 Contains the 5'end of the CREM gene for cAMP responsive element modulator, a novel gene, a vacuolar ATPase subunit (ATP6V1G2) pseudogene and a CpG island, complete sequence Length = 97643 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gaagagaagggcactagctt 467 |||||||||||||||||||| Sbjct: 5948 gaagagaagggcactagctt 5967
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 cgacgtggcggcggccatggccgacgag 171 ||||| |||||||||||||| ||||||| Sbjct: 193219 cgacgcggcggcggccatggtcgacgag 193192
>emb|AL772146.4| Zebrafish DNA sequence from clone CH211-12P8 in linkage group 7 Contains part of a novel gene similar to SCRIB (scrribble), a novel gene similar to SIAHBP1 (fuse-binding protein-interacting repressor), a novel gene similar to HTR5A (5-hydroxytryptamine (serotonin) receptor 5A) and three CpG islands, complete sequence Length = 187241 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 ctttcccagtgaggcaacggtctg 529 ||||||||||||||||| |||||| Sbjct: 110907 ctttcccagtgaggcaaaggtctg 110884
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 gtgtcgctgctgcgcgacgtggcggcgg 157 |||||| ||||||||| ||||||||||| Sbjct: 53436 gtgtcggtgctgcgcggcgtggcggcgg 53409
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tgtgcgccgggctggagaaggagg 196 ||||||||| |||||||||||||| Sbjct: 13561 tgtgcgccgcgctggagaaggagg 13584
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tgtgcgccgggctggagaaggagg 196 ||||||||| |||||||||||||| Sbjct: 89855 tgtgcgccgcgctggagaaggagg 89878
>dbj|AB232152.2| Chlamydomonas reinhardtii DHC9 mRNA for dynein heavy chain 9, complete cds Length = 13205 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 gcgcgacgtggcggcggccatggc 164 ||||||||||| |||||||||||| Sbjct: 4210 gcgcgacgtggtggcggccatggc 4233
>emb|CR613869.1| full-length cDNA clone CS0DC028YA13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1596 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 77 gtggcggcggccatggccga 96
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcagctggtggctgacctgc 109 |||||||||||||||||||| Sbjct: 58877 gcagctggtggctgacctgc 58896
>gb|AC091691.7| Homo sapiens chromosome 18, clone RP11-47G4, complete sequence Length = 164314 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctgatgaagagaagggcact 462 |||||||||||||||||||| Sbjct: 68867 ctgatgaagagaagggcact 68848
>gb|AC025419.42| Homo sapiens 12 BAC RP11-230G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170331 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctgatgaagagaagggcact 462 |||||||||||||||||||| Sbjct: 112652 ctgatgaagagaagggcact 112633
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgtggcggcggccatggccg 166 |||||||||||||||||||| Sbjct: 1563600 cgtggcggcggccatggccg 1563619
>ref|NM_137713.2| Drosophila melanogaster CG4266-RA (CG4266), mRNA Length = 4388 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 cggcggccatggccgacgagatgt 175 |||||||||||||| ||||||||| Sbjct: 2356 cggcggccatggccaacgagatgt 2379
>gb|AY058599.1| Drosophila melanogaster LD29226 full length cDNA Length = 2866 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 cggcggccatggccgacgagatgt 175 |||||||||||||| ||||||||| Sbjct: 835 cggcggccatggccaacgagatgt 858
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tgtgcgccgggctggagaaggagg 196 ||||||||| |||||||||||||| Sbjct: 20579227 tgtgcgccgcgctggagaaggagg 20579250 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 gtgtcgctgctgcgcgacgtggcggcgg 157 |||||| ||||||||| ||||||||||| Sbjct: 16092686 gtgtcggtgctgcgcggcgtggcggcgg 16092659
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcggccatggccgacgagat 173 |||||||||||||||||||| Sbjct: 18185957 gcggccatggccgacgagat 18185976
>gb|AY007810.1| Homo sapiens MESDC1 (MESDC1) mRNA, complete cds Length = 2411 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcagctggtggctgacctgc 109 |||||||||||||||||||| Sbjct: 772 gcagctggtggctgacctgc 791
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gagcagctggtggctgacct 107 |||||||||||||||||||| Sbjct: 10787 gagcagctggtggctgacct 10768
>gb|AC020659.5|AC020659 Homo sapiens chromosome 15 clone RP11-23P13 map 15q14, complete sequence Length = 139376 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gagcagctggtggctgacct 107 |||||||||||||||||||| Sbjct: 127203 gagcagctggtggctgacct 127184
>gb|AF233523.1|AF233523 Homo sapiens beta V spectrin (BSPECV) mRNA, complete cds Length = 11722 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gagcagctggtggctgacct 107 |||||||||||||||||||| Sbjct: 1162 gagcagctggtggctgacct 1181
>emb|X87247.1|PVULSGENE Pseudorabies virus UL21, UL20 & UL19 genes Length = 3797 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 catggccgacgagatgtgcg 178 |||||||||||||||||||| Sbjct: 3449 catggccgacgagatgtgcg 3430
>dbj|AK000559.1| Homo sapiens cDNA FLJ20552 fis, clone KAT11732 Length = 1362 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 52 gtggcggcggccatggccga 71
>dbj|AK109870.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A10, full insert sequence Length = 2048 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 tgtgcgccgggctggagaaggagg 196 ||||||||| |||||||||||||| Sbjct: 1055 tgtgcgccgcgctggagaaggagg 1078
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gcggccatggccgacgagat 173 |||||||||||||||||||| Sbjct: 1202 gcggccatggccgacgagat 1183
>emb|X87806.1|SCVRP1GEN S.cerevisiae VRP1 gene Length = 3423 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tggcaatggcggagcagctg 96 |||||||||||||||||||| Sbjct: 2131 tggcaatggcggagcagctg 2112
>emb|Z26645.1|SCVERPRL S.cerevisiae (A364) gene for verprolin Length = 2677 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tggcaatggcggagcagctg 96 |||||||||||||||||||| Sbjct: 2382 tggcaatggcggagcagctg 2363
>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete sequence Length = 305143 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 cggcggccatggccgacgagatgt 175 |||||||||||||| ||||||||| Sbjct: 75766 cggcggccatggccaacgagatgt 75743
>gb|DQ332653.1| Synthetic construct Saccharomyces cerevisiae clone FLH147515.01X VRP1 gene, complete sequence Length = 2454 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tggcaatggcggagcagctg 96 |||||||||||||||||||| Sbjct: 1983 tggcaatggcggagcagctg 1964
>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence Length = 204424 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 caaaggcattttctatagaa 576 |||||||||||||||||||| Sbjct: 155823 caaaggcattttctatagaa 155842
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcggccatggccgacgagat 173 |||||||||||||||||||| Sbjct: 18195210 gcggccatggccgacgagat 18195229
>gb|AC004156.1|AC004156 Homo sapiens chromosome 19, cosmid R33586, complete sequence Length = 41702 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 18550 gtggcggcggccatggccga 18531
>gb|BC025374.1| Homo sapiens ring finger protein 126, mRNA (cDNA clone MGC:23713 IMAGE:4093350), complete cds Length = 1322 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtggcggcggccatggccga 167 |||||||||||||||||||| Sbjct: 28 gtggcggcggccatggccga 47
>gb|U19028.1|YSCL8300 Saccharomyces cerevisiae chromosome XII cosmid 8300 Length = 37541 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tggcaatggcggagcagctg 96 |||||||||||||||||||| Sbjct: 10608 tggcaatggcggagcagctg 10627
>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes, complete cds and UL15 gene, 3' end Length = 9382 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 catggccgacgagatgtgcg 178 |||||||||||||||||||| Sbjct: 3449 catggccgacgagatgtgcg 3430 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,665,517 Number of Sequences: 3902068 Number of extensions: 5665517 Number of successful extensions: 110657 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 109753 Number of HSP's gapped (non-prelim): 892 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)