Clone Information

BLAST Search Result

Clone Name	bags20o14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FUTSC_DROME (Q9W596) Microtubule-associated protein futsch	37	0.015
2	DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai...	35	0.033
3	MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.4...	35	0.043
4	GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)	34	0.095
5	MAK5_CANAL (Q59ZH9) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)	33	0.21
6	ASF1_YEAST (P32447) Anti-silencing protein 1	32	0.28
7	MBR1_YEAST (P23493) Protein MBR1	32	0.36
8	YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative spl...	32	0.47
9	GPT1_YEAST (P32784) Glycerol-3-phosphate O-acyltransferase 1 (EC...	31	0.62
10	CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-bind...	31	0.62
11	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	31	0.62
12	HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein (...	31	0.80
13	HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein...	31	0.80
14	EMBP_RAT (Q63189) Eosinophil granule major basic protein precurs...	31	0.80
15	DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin...	31	0.80
16	T2EA_YEAST (P36100) Transcription initiation factor IIE alpha su...	31	0.80
17	GIDRP_MOUSE (Q8BJM3) Growth inhibition and differentiation-relat...	31	0.80
18	YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative s...	31	0.80
19	NOP14_SCHPO (O43051) Probable nucleolar complex protein 14	30	1.1
20	DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains...	30	1.1
21	SAS10_YEAST (Q12136) Something about silencing protein 10 (U3 sm...	30	1.4
22	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	30	1.4
23	INO80_YEAST (P53115) Putative DNA helicase INO80 (EC 3.6.1.-) (I...	30	1.4
24	AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-relate...	30	1.4
25	EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7	30	1.8
26	WRK33_ARATH (Q8S8P5) Probable WRKY transcription factor 33 (WRKY...	30	1.8
27	DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hD...	30	1.8
28	MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4...	30	1.8
29	DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx)	30	1.8
30	SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialopro...	30	1.8
31	SRC1_YEAST (Q03707) Protein SRC1	29	2.3
32	TPR_HUMAN (P12270) Nucleoprotein TPR	29	2.3
33	A4_TETFL (O73683) Amyloid beta A4 protein precursor (APP) (ABPP)...	29	2.3
34	VG48_SHV21 (Q01033) Hypothetical gene 48 protein	29	2.3
35	BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain ...	29	2.3
36	ISPH_ZYMMO (Q5NP61) 4-hydroxy-3-methylbut-2-enyl diphosphate red...	29	2.3
37	SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3....	29	2.3
38	PEX16_YARLI (P78980) Peroxisomal membrane protein PEX16 (Peroxin...	29	3.1
39	SEC7_YEAST (P11075) Protein transport protein SEC7	29	3.1
40	JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone dem...	29	3.1
41	YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF463...	29	3.1
42	UBX3_YEAST (Q12229) UBX domain-containing protein 3	29	3.1
43	HTR5_HALSA (Q48318) Halobacterial transducer protein V	29	3.1
44	RFC1_MOUSE (P35601) Activator 1 140 kDa subunit (Replication fac...	28	4.0
45	PRP22_YEAST (P24384) Pre-mRNA-splicing factor ATP-dependent RNA ...	28	4.0
46	SPT7_YEAST (P35177) Transcriptional activator SPT7	28	4.0
47	CRM_DROSE (Q8MX88) Protein cramped	28	4.0
48	ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1	28	4.0
49	UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-b...	28	4.0
50	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	28	5.2
51	MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48)...	28	5.2
52	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	28	5.2
53	PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a...	28	5.2
54	UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-b...	28	5.2
55	MDN1_GIALA (Q8T5T1) Midasin (MIDAS-containing protein)	28	5.2
56	DRD2L_DROME (Q8IS44) Dopamine D2-like receptor (DD2R)	28	5.2
57	JIP_CAEEL (P34609) JNK-interacting protein (JIP) (JNK MAP kinase...	28	5.2
58	CEBPZ_MOUSE (P53569) CCAAT/enhancer-binding protein zeta (CCAAT-...	28	5.2
59	JHD3A_MOUSE (Q8BW72) JmjC domain-containing histone demethylatio...	28	6.8
60	SWC3_KLULA (Q6CKU6) SWR1-complex protein 3	28	6.8
61	NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2	28	6.8
62	DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)	28	6.8
63	SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)	28	6.8
64	DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)	28	6.8
65	BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein h...	28	6.8
66	RPOB_SALTY (P06173) DNA-directed RNA polymerase beta chain (EC 2...	28	6.8
67	RPOB_SALTI (Q8Z320) DNA-directed RNA polymerase beta chain (EC 2...	28	6.8
68	RPOB_SALPA (Q5PK93) DNA-directed RNA polymerase beta chain (EC 2...	28	6.8
69	RPOB_SALCH (Q57H69) DNA-directed RNA polymerase beta chain (EC 2...	28	6.8
70	DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precur...	28	6.8
71	RPO6_MIMIV (Q5UQ32) DNA-directed RNA polymerase subunit 6 (EC 2....	27	8.9
72	PSTB1_BACSU (P46342) Phosphate import ATP-binding protein pstB 1...	27	8.9
73	SPRL1_RAT (P24054) SPARC-like protein 1 precursor (Matrix glycop...	27	8.9
74	SIMA_DROME (Q24167) Protein similar	27	8.9
75	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	27	8.9
76	VGLB_BHV2B (P12641) Glycoprotein B-1 precursor	27	8.9
77	SA155_YEAST (P43612) SIT4-associating protein SAP155	27	8.9
78	PCDBC_HUMAN (Q9Y5F1) Protocadherin beta 12 precursor (PCDH-beta12)	27	8.9
79	MMAA_MOUSE (Q8C7H1) Methylmalonic aciduria type A homolog, mitoc...	27	8.9
80	VGLB_SHV1 (Q04464) Glycoprotein B precursor	27	8.9
81	UNC33_CAEEL (Q01630) Uncoordinated protein 33 (Protein unc-33)	27	8.9
82	PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-spe...	27	8.9
83	GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112	27	8.9
84	YA2G_SCHPO (Q09706) Hypothetical protein C2F7.16c in chromosome I	27	8.9
85	SEC16_SCHPO (O14029) Multidomain vesicle coat protein	27	8.9
86	GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)	27	8.9
87	GYRA_RICCN (Q92IZ6) DNA gyrase subunit A (EC 5.99.1.3)	27	8.9

>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch|
          Length = 5412

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
 Frame = +1

Query: 13   SSVAPTVDEDNDLSENGLDSVDG-PSVVPE--KTRSNTDNLESQEEDEPKFAGDQQSNGE 183
            +SV  +V +++D +E+  +S+    SV+ E  K+ S + + +SQ++++   A  + S  E
Sbjct: 2892 ASVVESVKDEHDKAESRRESIAKVESVIDEAGKSDSKSSSQDSQKDEKSTLASKEASRRE 2951

Query: 184  NGV----GNAYTIEGRDVTDACT------EQLDNLDIKSETEEGVSVSASFVDDESSEQS 333
            + V     +A   E R  +   +      E    LD K  +  G  V +   +DE SEQ 
Sbjct: 2952 SVVESSKDDAEKSESRPESVIASGEPVPRESKSPLDSKDTSRPGSMVESVTAEDEKSEQQ 3011

Query: 334  WALRSLSESTVACVTSD 384
                S++ES  A    D
Sbjct: 3012 SRRESVAESVKADTKKD 3028

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>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin|
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 1253

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQ--EEDEPKFAGDQQSNGENGVGNAYT 207
           D+ N  S+N   S    S   ++++ N +  +S+  E+D+     D  ++  NG GN   
Sbjct: 475 DDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGN 534

Query: 208 IEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTVACVTSD 384
            +  D +D+   + D+ D  S      S S+   D +SS+ + +  S S  + +  +SD
Sbjct: 535 -DDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSD 592

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>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Monocytic leukemia zinc finger protein) (Monocytic
            leukemia zinc finger homolog)
          Length = 2003

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
 Frame = +1

Query: 40   DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGR 219
            ++D  E G+      S +    + + +N + ++E EP    DQ S+  + V         
Sbjct: 1333 EDDKEEPGIQG----SFLAANMQDSRENTKDKDEAEPDSEEDQPSHEASVVSETMPGSEE 1388

Query: 220  DVTDACTEQLDNLDIKSETE--------EGVSVSASFVDDESSEQSWALRSLSESTVACV 375
            D  +    + + +++K E E        E V    S   +ESSE   A +   E+  AC 
Sbjct: 1389 DHEEDSNTKEELIELKEEEEIPHSELDLETVQAVQSLTQEESSEHEGAYQDCEETLAACQ 1448

Query: 376  T 378
            T
Sbjct: 1449 T 1449

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>GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 464

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 37  EDNDLSENGLDSVDGPSVVPE-KTRSNTDNLESQEEDEPKFAGDQQSNGENGVG 195
           ED D  ENG+D  D      E K   + D+ E  E+DE     D++  GE+G G
Sbjct: 31  EDEDFQENGIDDEDEEEEEEEAKDEGDEDDEEKGEDDE---EDDEEKEGEDGEG 81

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>MAK5_CANAL (Q59ZH9) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)|
          Length = 782

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDG--PSVVPEKT---------RSNTDNLESQEEDEPKFAG-DQQSN 177
           +E N+  EN +D  D   P V  EK              +  E +EE+E +FAG +   N
Sbjct: 86  EETNENGENNMDVEDNETPEVEDEKPTEQEEEEEEEEEEEEEEEEEEEEEEFAGFEDDEN 145

Query: 178 GENGVGNAYTIEGRDVTDACTEQLDNLDIKS 270
            +     +  +   D  D   E  D L+  S
Sbjct: 146 NQEDANTSERVSNNDKDDKLAESNDELNAVS 176

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>ASF1_YEAST (P32447) Anti-silencing protein 1|
          Length = 279

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 34  DEDNDLSEN---GLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGN 198
           DED+D  +      ++ +      EKT  N  NLE +EED     GD++  GE  VG+
Sbjct: 189 DEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDIENSDGDEE-EGEEEVGS 245

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>MBR1_YEAST (P23493) Protein MBR1|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           DT+S+A TV +  D    G+ S+         T S+++N   +    P    +   NG  
Sbjct: 109 DTNSIASTVHDPVDSKYGGMPSLRKAKTTSYFTSSSSNNTTMRN---PLKKCNTNINGLL 165

Query: 187 GVGNAYTIEGRDVTD----ACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLS 354
             G + +   + + +    ACT++ +N+ +KSET      S S     S   S       
Sbjct: 166 VNGRSSSSSRQSIPELFSGACTKKKNNVLLKSETPNSEFSSNSLQHCNSRSFSLPRSRSR 225

Query: 355 ESTVACVTSDYAMQNVI 405
            S +A  T  Y ++  +
Sbjct: 226 SSAIAIPTHLYGLEKYV 242

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>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 25/94 (26%), Positives = 43/94 (45%)
 Frame = +1

Query: 31  VDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTI 210
           V+ED ++ E+G D         E+   + +  E +EEDE +   +++   E      Y  
Sbjct: 208 VEEDEEVDEDGDDD--------EEVDEDAEEEEDEEEDEEEEDEEEEEEEE----EEYEQ 255

Query: 211 EGRDVTDACTEQLDNLDIKSETEEGVSVSASFVD 312
           + RD      E+ ++ D +SE  +  S S SF D
Sbjct: 256 DERDQ----KEEGNDYDTRSEASDSGSESVSFTD 285

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>GPT1_YEAST (P32784) Glycerol-3-phosphate O-acyltransferase 1 (EC 2.3.1.15)|
           (G-3-P acyltransferase 1) (Dihydroxyacetone phosphate
           acyltransferase 1) (EC 2.3.1.42) (DHAP-AT 1)
           (Glycerol-3-phosphate / dihydroxyacetone phosphate
           acyltransferase 1)
          Length = 759

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
 Frame = +1

Query: 1   SFDTSSVAPT----VDEDNDLSE--NGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAG 162
           S  ++SVAP+     + +N++ E  NGL S    +V+ ++   NT   E +EE+E +   
Sbjct: 689 SLASTSVAPSSSSEFEVENEILEEKNGLASKIAQAVLNKRIGENTAREEEEEEEEEEEEE 748

Query: 163 DQQSNGENG 189
           +++  G+ G
Sbjct: 749 EEEEEGKEG 757

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>CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 873

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
 Frame = +1

Query: 40  DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGR 219
           D D + N +D   GP V PE     T + E   E EP+   D + + E    +    +  
Sbjct: 536 DGDSAVNPVDPTPGPPVDPEPEPEPTPDPEPSPEPEPEPTPDPEPSPEPDPDSDSDSDSG 595

Query: 220 DVTDACTEQLDNLDIKSETE-EGVSVSASFVDDESSEQS 333
             +D+ ++   + D  S+++ +  S S S  D +S   S
Sbjct: 596 SDSDSGSDSDSDSDSDSDSDSDSNSDSESDSDSDSDSDS 634

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +1

Query: 91   VPEKTRSNTDNLESQEED--EPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDI 264
            VP +T S+   + +Q  D  E K   D  S  E  V +   +EG +V D   E L+NL++
Sbjct: 2666 VPSETTSDNLQITTQPSDGLEEKLDSDDPSVKELDVKD---LEGVEVKDLDDEDLENLNL 2722

Query: 265  KSETEEGVSVSASFVDD 315
              +TE+G  V    +D+
Sbjct: 2723 --DTEDGKVVELDTLDN 2737

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>HAP28_RAT (Q62785) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 22/82 (26%), Positives = 37/82 (45%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIE 213
           +E+++  E G    DG S  P+K + + D+ ES++ED      D       GV     IE
Sbjct: 35  NEEDEQEEGG----DGASGDPKKEKKSLDSDESEDED------DDYQQKRKGVEGLIDIE 84

Query: 214 GRDVTDACTEQLDNLDIKSETE 279
             +     T+++  LD+    E
Sbjct: 85  NPNRVAQTTKKVTQLDLDGPKE 106

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>HAP28_MOUSE (Q3UHX2) 28 kDa heat- and acid-stable phosphoprotein|
           (PDGF-associated protein) (PAP) (PDGFA-associated
           protein 1) (PAP1)
          Length = 181

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 22/82 (26%), Positives = 37/82 (45%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIE 213
           +E+++  E G    DG S  P+K + + D+ ES++ED      D       GV     IE
Sbjct: 35  NEEDEQEEGG----DGASGDPKKEKKSLDSDESEDED------DDYQQKRKGVEGLIDIE 84

Query: 214 GRDVTDACTEQLDNLDIKSETE 279
             +     T+++  LD+    E
Sbjct: 85  NPNRVAQTTKKVTQLDLDGPKE 106

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>EMBP_RAT (Q63189) Eosinophil granule major basic protein precursor (MBP)|
          Length = 227

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +1

Query: 10  TSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENG 189
           + S +P VDE           +  P V          +LE +EE+E     ++ S  E  
Sbjct: 24  SDSKSPLVDESLPREAE----ISRPEVEESPPGEQLMSLEEEEEEEE----EEGSGSEGA 75

Query: 190 VGNAYTIEGRDVTD 231
           +GN   + G+DVTD
Sbjct: 76  LGNEGAVSGQDVTD 89

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>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix|
           protein 3) (DMP-3) [Contains: Dentin phosphoprotein
           (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
 Frame = +1

Query: 10  TSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENG 189
           TS  +   D D+D      DS D  S   +   +   + ES+++DE        S+ +N 
Sbjct: 485 TSDESSDDDNDSDSHAGEDDSSDDSSGDGDSDSNGDGDSESEDKDE-----SDSSDHDNS 539

Query: 190 VGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDES-------SEQSWALRS 348
             +    +  D +D  ++  D+ D    ++   S  +S   D S       S  S     
Sbjct: 540 SDSESKSDSSDSSDDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNSSSDSSDSSGSSD 599

Query: 349 LSESTVACVTSD 384
            S+S+  C +SD
Sbjct: 600 SSDSSDTCDSSD 611



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = +1

Query: 109 SNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGV 288
           SN+D  +S E D+    GD   + +          G D +D  +E        S  E G 
Sbjct: 434 SNSDGHDSYEFDDESMQGDDPKSSDES-------NGSDESDTNSE--------SANESGS 478

Query: 289 SVSASFVDDESSE 327
              AS+  DESS+
Sbjct: 479 RGDASYTSDESSD 491

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>T2EA_YEAST (P36100) Transcription initiation factor IIE alpha subunit|
           (TFIIE-alpha) (Transcription factor A large subunit)
           (Factor A 66 kDa subunit)
          Length = 482

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
 Frame = +1

Query: 97  EKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTD----ACTEQLDNLDI 264
           E+     +  + +EE+E +       N E    NA   E  DVTD    A TE   + D+
Sbjct: 374 EEEEEEEEEEDEEEEEEEEMEDVMDDNDETARENALEDEFEDVTDTAGTAKTESNTSNDV 433

Query: 265 KSE-----TEEGVSVSAS 303
           K E     TE+ V+ +A+
Sbjct: 434 KQESINDKTEDAVNATAT 451

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>GIDRP_MOUSE (Q8BJM3) Growth inhibition and differentiation-related protein 88|
           homolog
          Length = 775

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 26/129 (20%), Positives = 52/129 (40%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           D  ++  T+  D++ + + L++ DG S       S        +ED      D +   E 
Sbjct: 227 DGMAMPVTLSSDSETAPSSLETPDGMSKHSPGDISVVSVPGGPDEDVDSTFVDFEVESEG 286

Query: 187 GVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTV 366
            V +  ++ G+   D+  E +DN+ +K      +  +   +D   + +  +  S  E  V
Sbjct: 287 TVNSTESVLGQKGVDSILETVDNVSLKMAVVSKLESTNGTIDPAVTRECESDSSADELCV 346

Query: 367 ACVTSDYAM 393
               SD A+
Sbjct: 347 KSEPSDTAV 355

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>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor|
           YT521)
          Length = 727

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 21/102 (20%), Positives = 40/102 (39%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           +   V   V+ED ++ E+  +  +      E+     +  E +EE+E ++  D++   E 
Sbjct: 201 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEE 260

Query: 187 GVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVD 312
           G                    ++ D +SE  +  S S SF D
Sbjct: 261 G--------------------NDYDTRSEASDSGSESVSFTD 282

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>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14|
          Length = 827

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +1

Query: 124 LESQEEDEPKFAG----DQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVS 291
           +E  +ED    AG    +Q ++   G G     E  +  +   E+ +    +SE EE V+
Sbjct: 318 MEHYQEDSASEAGSIEDEQATDNVFGFGKGLEQENEEEWNGINEEAE----ESEDEESVN 373

Query: 292 VSASFVDDE 318
              SFVDDE
Sbjct: 374 SDTSFVDDE 382

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>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains: Dentin|
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 687

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 27/118 (22%), Positives = 44/118 (37%)
 Frame = +1

Query: 10  TSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENG 189
           TS  +     D+D      DS D  S   +   +  D+ ES+++DE        SN +N 
Sbjct: 482 TSDESSDNGSDSDSHAGEDDSSDDTSDTDDSDSNGDDDSESKDKDE-----SDNSNHDND 536

Query: 190 VGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSEST 363
             +    +  D     ++  D+ D    +E   S  +S   D S     +  S S  T
Sbjct: 537 SDSESKSDSSDSDSDSSDSSDSSDSSDSSETSDSSDSSDTSDSSDSSDSSDSSNSSDT 594



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/73 (24%), Positives = 32/73 (43%)
 Frame = +1

Query: 109 SNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGV 288
           SN+D  +S + D+    GD  ++ +   G              ++  D+ + +S  E G 
Sbjct: 430 SNSDGHDSYDFDDESMQGDDPNSSDESNG--------------SDGSDDANSESAIENGN 475

Query: 289 SVSASFVDDESSE 327
              AS+  DESS+
Sbjct: 476 HGDASYTSDESSD 488

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>SAS10_YEAST (Q12136) Something about silencing protein 10 (U3 small nucleolar|
           RNA-associated protein 3) (U3 snoRNA-associated protein
           11)
          Length = 610

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/103 (19%), Positives = 44/103 (42%)
 Frame = +1

Query: 28  TVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYT 207
           ++DE  D  E   + +DG +   +    N +  +  EEDE     D ++   +  G  Y 
Sbjct: 72  SIDEREDEEEEEEEELDGAAAYKKIFGRNLETDQLPEEDEENGMLDNENAWGSTKGEYYG 131

Query: 208 IEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSW 336
            +  D  D   ++++   ++ + +    ++ +   DE  E+ W
Sbjct: 132 ADDLD-DDEAAKEIEKEALRQQKKHLEELNMNDYLDEEEEEEW 173

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>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Runt-related transcription factor-binding protein 2)
            (Monocytic leukemia zinc finger protein) (Zinc finger
            protei
          Length = 2004

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
 Frame = +1

Query: 31   VDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEED--------EPKFAGDQQSNGEN 186
            V E+  + E+ LD+    S    K +  T+ L+S+EE           + AG +  + E+
Sbjct: 1341 VKEEPGVQESFLDANMQKSREKIKDKEETE-LDSEEEQPSHDTSVVSEQMAGSEDDHEED 1399

Query: 187  GVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTV 366
                   IE ++      E++ + ++  ET + V    S   +ESSE   A +   E+  
Sbjct: 1400 SHTKEELIELKE-----EEEIPHSELDLETVQAVQ---SLTQEESSEHEGAYQDCEETLA 1451

Query: 367  ACVT 378
            AC T
Sbjct: 1452 ACQT 1455

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>INO80_YEAST (P53115) Putative DNA helicase INO80 (EC 3.6.1.-)|
           (Inositol-requiering protein 80)
          Length = 1489

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 5/137 (3%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           D +     V  + D +E+G +  D  +    +  ++ DN    E D      D++ NGE 
Sbjct: 201 DQTHADTVVTVNGDENEDGNNGEDEDNDNDNENNNDNDNDNENENDNDSDNDDEEENGE- 259

Query: 187 GVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDD-----ESSEQSWALRSL 351
                      D  +   E LD  D  +  E+  +    F  D     + S  S +   L
Sbjct: 260 ----------EDEEEEEIEDLDEEDFAAFEEQDDNDDEDFNPDVEKRRKRSSSSSSSTKL 309

Query: 352 SESTVACVTSDYAMQNV 402
           S ++++ +TS    +N+
Sbjct: 310 SMNSLSLITSKKINKNI 326

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>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein complex|
            3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein
            complex AP-3 beta-2 subunit) (AP-3 complex beta-2
            subunit) (Clathrin assembly protein complex 3 beta-2
            large chain) (Neu
          Length = 1082

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 5/128 (3%)
 Frame = +1

Query: 25   PTVDEDNDL-SENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNA 201
            PT   D+D  SE+  DS         ++ S +DN E Q+EDE K  G +    E   G  
Sbjct: 687  PTESADSDPESESESDSKSSSESGSGESSSESDN-EDQDEDEEKGRGSESEQSEED-GKR 744

Query: 202  YT----IEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTVA 369
             T     E +    +  E  D+    SE+E    +++   +++    SW+ ++   S  A
Sbjct: 745  KTKKKVPERKGEASSSDEGSDSSSSSSESE----MTSESEEEQLEPASWSRKTPPSSKSA 800

Query: 370  CVTSDYAM 393
              T + ++
Sbjct: 801  PATKEISL 808

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>EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7|
          Length = 445

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
 Frame = +1

Query: 31  VDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTI 210
           +DE  +   + ++ VD         +   +N   QEED+ K   ++++  E   G+  + 
Sbjct: 210 LDEQTNDDMSDIEDVDKDKGDETIAKIKKENTSEQEEDKNKKQTEEEAEEEEEEGDHVSG 269

Query: 211 EGRDVTDACT-EQLDNLDIKSETEEGVSVSASFVDDESSEQS 333
           + R+  +  T E  D  D + + E+ V V      D+ +E S
Sbjct: 270 DERESKNKDTSEDEDGEDNEDQDEDDVEVIEDSHTDKENESS 311

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>WRK33_ARATH (Q8S8P5) Probable WRKY transcription factor 33 (WRKY DNA-binding|
           protein 33)
          Length = 512

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   SFDTSSVAPTVDEDNDLSEN-GLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSN 177
           SF  S       EDN  S++ G D  +  S +  +   +  +    E +  ++ GD ++N
Sbjct: 273 SFHQSDSFGMQQEDNTTSDSVGDDEFEQGSSIVSRDEEDCGS----EPEAKRWKGDNETN 328

Query: 178 GENGVGNAYTIEGRDVTDACTEQLDNLD 261
           G NG G+    E R V    T  +D LD
Sbjct: 329 GGNGGGSKTVREPRIVVQT-TSDIDILD 355

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>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hDaxx) (Fas|
           death domain-associated protein) (ETS1-associated
           protein 1) (EAP1)
          Length = 740

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 28  TVDEDNDLSENGLDSVDGPSVV-----PEKTRSNTDNLESQEEDEPKFAGDQQSNGE 183
           T     D  E  LDS +GPS +     P  +R+ TD+ + +E DE +   +++   E
Sbjct: 401 TSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEE 457

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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
            zinc finger protein-related factor) (Histone
            acetyltransferas
          Length = 2073

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/83 (21%), Positives = 37/83 (44%)
 Frame = +1

Query: 82   PSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLD 261
            P   PE      +  E +EE+E +   +++   E G GN      +D   A +++ +  +
Sbjct: 1339 PGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNV----EKDPDGAKSQEKEEPE 1394

Query: 262  IKSETEEGVSVSASFVDDESSEQ 330
            I +E E+   +     ++E  E+
Sbjct: 1395 ISTEKEDSARLDDHEEEEEEDEE 1417

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>DAXX_MOUSE (O35613) Death domain-associated protein 6 (Daxx)|
          Length = 739

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = +1

Query: 10  TSSVAPTVDEDNDLSENGLDSVDGPSVVPEK------TRSNTDNLESQEEDEPKFAGDQQ 171
           T+S A T D+D+D  ++  D+ +      E+      T    ++LE  +ED+    GD++
Sbjct: 435 TTSKAETDDDDDDDDDDDEDNEESEEEEEEEEEEKEATEDEDEDLEQLQEDQ---GGDEE 491

Query: 172 SNGENGVGN 198
             G +  GN
Sbjct: 492 EEGGDNEGN 500

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>SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP|
           II) (Cell-binding sialoprotein) (Integrin-binding
           sialoprotein)
          Length = 317

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
 Frame = +1

Query: 25  PTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSN-----GENG 189
           P     +   ENG DS +      E +    +N ES E+++ +      S      GE+ 
Sbjct: 59  PVQGSSDSSEENGDDSSEEEEEEEETSNEGENNEESNEDEDSEAENTTLSATTLGYGEDA 118

Query: 190 V-GNAYT--------IEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQ 330
             G  YT         +  D+T+  T++ ++ + + E EEG     S  + + +EQ
Sbjct: 119 TPGTGYTGLAAIQLPKKAGDITNKATKEKESDEEEEEEEEGNENEESEAEVDENEQ 174

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>SRC1_YEAST (Q03707) Protein SRC1|
          Length = 834

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEED 144
           D+D+D  ++  D  D P +VP  T  +TD ++ +E+D
Sbjct: 118 DDDDDDDDDDNDKKDDPLIVPSGT--DTDEVDDEEDD 152

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>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = +1

Query: 52   SENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTD 231
            S++G    D   V+        +  +  +ED+    GD+  +   G G+A   +G +  D
Sbjct: 1933 SQDGQGKGDDVIVIDSDDEEEDEEDDDDDEDDTGM-GDEGEDSNEGTGSADGNDGYEADD 1991

Query: 232  ACTEQLDNLDIKSETEEGV 288
            A  E  D  D  +ETEE +
Sbjct: 1992 A--EGGDGTDPGTETEESM 2008

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>A4_TETFL (O73683) Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer|
           disease amyloid A4 A4 protein homolog) [Contains:
           Beta-amyloid protein (Beta-APP) (A-beta)]
          Length = 780

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 24/122 (19%), Positives = 52/122 (42%)
 Frame = +1

Query: 40  DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGR 219
           DND S+N +     P+   E+TR +      +EE+E + A +     E  +      +G 
Sbjct: 214 DNDYSDNSMVREPEPAEQQEETRPSV----VEEEEEGEVAQEDDEEEEEVLDTDQDGDGE 269

Query: 220 DVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTVACVTSDYAMQN 399
           +  +A  ++        E EE V    +F + +  +      +++ +T    T+  +++ 
Sbjct: 270 EDHEAADDE--------EEEEDVDEIDAFGESDDVDADEPTTNVAMTTTTTTTTTESVEE 321

Query: 400 VI 405
           V+
Sbjct: 322 VV 323

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>VG48_SHV21 (Q01033) Hypothetical gene 48 protein|
          Length = 797

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 25/83 (30%), Positives = 34/83 (40%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIE 213
           DE+ D  E+  D  D      E+     D+ E + EDE +  GD+   G+ G       E
Sbjct: 415 DEEEDEGEDEEDEKDEK----EEGEDEGDDGEDEGEDEGEDEGDEGDEGDEGED-----E 465

Query: 214 GRDVTDACTEQLDNLDIKSETEE 282
           G D  D   E  D  D   E E+
Sbjct: 466 GEDEDDEEDEGEDEGDEGDEGED 488

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>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B|
           (Extracellular matrix protein F22)
          Length = 2130

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGE 183
           DED D  +   DS D  S     + S+TD  E +++++ K   +  ++ E
Sbjct: 563 DEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDDEDDKDQDESDTDTE 612

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>ISPH_ZYMMO (Q5NP61) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 340

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 37/136 (27%), Positives = 51/136 (37%), Gaps = 4/136 (2%)
 Frame = +1

Query: 4   FDTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKF--AGDQQSN 177
           F    VA TV ++ +  E GL  VD    +  K  +      S          AG  +  
Sbjct: 72  FSAHGVARTVQKEAE--ERGLPVVDATCPLVNKVHAQGRRYLSHGRTLILIGHAGHPEIE 129

Query: 178 GENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSE 357
           G  G      I+G        EQ+D+LDI S+T        +   D++     ALR    
Sbjct: 130 GTLG-----QIDGPVHLVGSAEQVDSLDIPSDTPVAFITQTTLSVDDTRSVIAALRKKFT 184

Query: 358 STVACVTSD--YAMQN 399
             +   TSD  YA QN
Sbjct: 185 DVIGPDTSDICYATQN 200

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>SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3.6.1.-)|
           (ATP-dependent helicase SNF2) (SWI/SNF complex component
           SNF2) (Regulatory protein SWI2) (Regulatory protein
           GAM1) (Transcription factor TYE3)
          Length = 1703

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 14/114 (12%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQ------------SN 177
           D++N  + NG ++   P        +NTDN+     + P  + D+              N
Sbjct: 308 DQNNQSNLNGGNNTQQPGTNSHYNNTNTDNVSGLTRNAPLDSKDENFASVSPAGPSSVHN 367

Query: 178 GENGV--GNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQS 333
            +NG    N+ T+ G  +T   +++ +N     ET   V+ +A   +   +EQ+
Sbjct: 368 AKNGTLDKNSQTVSGTPITQTESKKEEN-----ETISNVAKTAPNSNKTHTEQN 416

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>PEX16_YARLI (P78980) Peroxisomal membrane protein PEX16 (Peroxin-16)|
          Length = 391

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 53  LKMVWIPWMALLLFQRKQGQILTTWNLRKRMN---PNLLEINNLMGRMGLAMLILLRVE 220
           L   W PW+  L+ +    +++ +W LR+R +   P  L+   + GR  L    L R E
Sbjct: 286 LNSPWAPWIIGLVIEALSRKMMGSWLLRQRQSGKTPTALDQMEVKGRTNLLGWWLFRGE 344

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>SEC7_YEAST (P11075) Protein transport protein SEC7|
          Length = 2009

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
 Frame = +1

Query: 13  SSVAPTVDEDNDLSE-----NGLDS-VDGP----SVVPEKTRSN--TDNLESQEEDEPKF 156
           SSV P+V   N + E     NG D    GP    S    K  SN  T+ +++ EE E   
Sbjct: 25  SSVNPSVKPQNAIKEEAKETNGEDQKCKGPENAGSTAETKETSNDATNGMKTPEETEDTN 84

Query: 157 AGDQQSNGENGVGNAYTIEGRDVT--DACTEQLDNLDIKSETEE--------GVSVSASF 306
                  GE+G  +    E  D    D   E +D+   ++ +E+        G S  +S 
Sbjct: 85  DKRHDDEGEDGDEDEDEDEDEDEDNGDEDDEDVDSSSSETSSEDGEDSESVSGESTESSS 144

Query: 307 VDDESSEQSWALRSLSES 360
            +DE S++S    S S S
Sbjct: 145 GEDEESDESDGNTSNSSS 162

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>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C)
          Length = 2350

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 27/108 (25%), Positives = 40/108 (37%)
 Frame = +1

Query: 46  DLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDV 225
           D + +  +S D  S    K  + T + E   E EPK     + NGE G   A    G + 
Sbjct: 188 DNASDASESSDAES--SSKRVTETSSSEPMPEYEPKNKVTSKVNGEEGQSQAAEEAGEET 245

Query: 226 TDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTVA 369
                   D +       EG    ++   D   +    LRS  ++TVA
Sbjct: 246 LIDTRPPWDQMQEDKNHNEGEKPKST---DSHLQDKMTLRSSEQATVA 290

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>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631 intergenic|
           region
          Length = 203

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
 Frame = +1

Query: 13  SSVAPTVDEDNDLSENGL-DSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENG 189
           SS + ++ ED D  E+ L DS D   +V   + S++ + E  EE+E      ++S   + 
Sbjct: 61  SSFSLSLSEDEDEDESELEDSFDSSFLVSSFSSSSSSSEEESEEEE------EESLDSSF 114

Query: 190 VGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALR--SLSEST 363
           + +A      D  +  +E  D  + +    +  S S S  D++  E S      +L+ S+
Sbjct: 115 LVSASLSLSEDDEEEDSESEDEDEDEDSDSDSDSDSDSDEDEDEDEDSEEEEETALAFSS 174

Query: 364 VACV 375
           +AC+
Sbjct: 175 LACL 178

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>UBX3_YEAST (Q12229) UBX domain-containing protein 3|
          Length = 455

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = +1

Query: 109 SNTDNLESQEEDEPKFAGDQQSNGENG------VGNAYTIEGRDVTDACTEQL 249
           SNTD+  + E    +F+     N ENG      + N+YT    ++ DAC+EQ+
Sbjct: 132 SNTDSTSNNESSGVQFSFGSLYNPENGTFSKSIMQNSYT----ELLDACSEQV 180

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>HTR5_HALSA (Q48318) Halobacterial transducer protein V|
          Length = 545

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/67 (22%), Positives = 32/67 (47%)
 Frame = +1

Query: 19  VAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGN 198
           ++  +DE    SE  + SVD  + + + T    +N+ +  E++     +  S+ ++    
Sbjct: 454 ISQAMDEQAQRSERVVSSVDDIATISQATADRAENVSAASEEQTASITEVTSSLQSLAAQ 513

Query: 199 AYTIEGR 219
           A T+E R
Sbjct: 514 ADTLEDR 520

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>RFC1_MOUSE (P35601) Activator 1 140 kDa subunit (Replication factor C large|
            subunit) (A1 140 kDa subunit) (RF-C 140 kDa subunit)
            (Activator 1 large subunit) (A1-P145)
            (Differentiation-specific element-binding protein)
            (ISRE-binding protein)
          Length = 1131

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 13   SSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAG 162
            S  +    ED+  SE   D+V+  +++ +KTRS+  +   +E++  K  G
Sbjct: 1077 SEYSEEFQEDDTQSEKEQDAVETDAMIKKKTRSSKPSKSEREKESKKGKG 1126

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>PRP22_YEAST (P24384) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22|
           (EC 3.6.1.-)
          Length = 1145

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
 Frame = +1

Query: 37  EDNDLSENGLDSVDGPSVVPEKTRSNTDNL--ESQEEDEPKFAGDQQSNG---------- 180
           +D  +     + VD  S + E+ R  TD +  E   +D PKF  DQQ  G          
Sbjct: 332 DDGSIVNGNTEKVD--SKLEEQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMPKIT 389

Query: 181 --ENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQ 330
               G  N   I G +      E  + L  K E E+ +    SF D   +++
Sbjct: 390 KVPRGFMNRSAINGSNAIRDHRE--EKLRKKREIEQQIRKQQSFDDPTKNKK 439

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>SPT7_YEAST (P35177) Transcriptional activator SPT7|
          Length = 1332

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
 Frame = +1

Query: 16  SVAPTVD-EDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGV 192
           +V+P VD   +D+S   +   D  +     + SN +++E++ ED+          G+N +
Sbjct: 86  AVSPAVDTRSDDVSSQTIK--DNNNTNTNTSISNENHVENEIEDK----------GDNAI 133

Query: 193 GNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTVAC 372
            N       D +D   E L  LD++ + ++ +S    F+ + S +  + L   +   + C
Sbjct: 134 ANEDNFVNNDESDNVEEDLFKLDLE-DLKQQIS-GTRFIGNLSLKIRYVLWQCAIDYIYC 191

Query: 373 VTSDYAMQN 399
             +++  +N
Sbjct: 192 DRNEFGDEN 200

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>CRM_DROSE (Q8MX88) Protein cramped|
          Length = 975

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -2

Query: 317 SSSTKDALTLTPSSVSLFISKLSNCSVHASVTSLPSIV*ALPTPFSPLDC 168
           SSS+    T T +S ++  S  SNC V A+ TS  S+      P++P DC
Sbjct: 634 SSSSVATQTGTSASNAIQTSASSNCYVSATSTSSTSL------PYNPNDC 677

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>ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1|
          Length = 4167

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 136  PEIPSCQYLTLFSLEQQKGHPRNPNHFQTSHYP 38
            P++PSC +L    L +Q   PR  +H +  H P
Sbjct: 2873 PDLPSCIFLEQRELFEQSKAPRADDHVRKHHSP 2905

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>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1) (Autoantigen NOR-90)
          Length = 764

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIE 213
           DE+ D SE+G DS +  S   +++    +N E  E+++     D+  + E+   ++ +  
Sbjct: 697 DENGDSSEDGGDSSESSS--EDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSS 754

Query: 214 GRDVTDA 234
             D +D+
Sbjct: 755 SGDSSDS 761

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Hyperpolarization-activated
           cation channel 4) (HAC-4)
          Length = 1175

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 287 TPSSVSLFISKLSNCSVHASVTSLPSIV*ALPTPFSP 177
           TPSS SL +  L  CS  A + SL     + P P  P
Sbjct: 849 TPSSASLHVQPLPGCSTPAGLGSLLPTAGSPPAPTPP 885

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>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Monocytic leukemia zinc finger protein) (Monocytic
            leukemia zinc finger homolog)
          Length = 1998

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
 Frame = +1

Query: 85   SVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEG--RDVTDACTEQLDNL 258
            S +    + + +N + ++E E     +Q S+ E  VG+  T+ G   D  +    + + +
Sbjct: 1343 SFLDASIQDSRENAKDKDETEADSEEEQPSH-EASVGSE-TMPGSEEDHEEDSNTKEELI 1400

Query: 259  DIKSETE--------EGVSVSASFVDDESSEQSWALRSLSESTVACVT 378
            ++K E E        E V    S   +ESSE   A +   E+  AC T
Sbjct: 1401 ELKEEEEIPHSELDLETVQAVQSLTQEESSEHEGAYQDCEETLAACQT 1448

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>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/89 (22%), Positives = 37/89 (41%)
 Frame = +1

Query: 64  LDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTE 243
           LD  D        + +  D ++ +EEDE    G+ + + ++  G     +  D  D   E
Sbjct: 145 LDGYDREDQEAPDSDAEVDGVDEEEEDEE---GEDEEDEDDEDGEEEEFDEEDDEDEDVE 201

Query: 244 QLDNLDIKSETEEGVSVSASFVDDESSEQ 330
             ++ D  SE EE   +     D++  E+
Sbjct: 202 GDEDDDEVSEEEEEFGLDEEDEDEDEDEE 230

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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 220 DVTDACTEQLDNLDIKSETEEGVSVSASFVDDESS 324
           D+TD   EQL+NL+I+ + ++  + S S   + SS
Sbjct: 2   DITDKTAEQLENLNIQDDQKQAATGSESQSVENSS 36

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>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1)
          Length = 765

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 34  DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGE 183
           DE+ D SE+G DS +  S    +     D+ +  E+DE     D+ +  E
Sbjct: 698 DENGDSSEDGGDSSESSSEDESEDGDENDDDDDDEDDEDDDDEDEDNESE 747

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>MDN1_GIALA (Q8T5T1) Midasin (MIDAS-containing protein)|
          Length = 4835

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/97 (27%), Positives = 38/97 (39%)
 Frame = +1

Query: 34   DEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIE 213
            D+ NDL +  L      SV        T N E +EE +      Q S+  N   +A  IE
Sbjct: 4205 DDYNDLDDKNLSGQSDLSVPEADGEDETVNEELEEEQQ------QMSDLSNPDQDACAIE 4258

Query: 214  GRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESS 324
              D  D  +   +N +   E E  V +  +   DE S
Sbjct: 4259 EDDDRDLPSSD-ENAEEHDEHEAPVDIDDNEASDEQS 4294

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>DRD2L_DROME (Q8IS44) Dopamine D2-like receptor (DD2R)|
          Length = 506

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 16  SVAPTVDEDNDLSENGLDSVDGPS-VVPEKTRSNTDNLESQEEDEPKFAGD 165
           SV   + +   L+E  LDS    S ++P++  +NT +  ++EEDE   + D
Sbjct: 282 SVIENIAQTRRLAETALDSSRHASRILPDEAATNTASGSNEEEDENAISPD 332

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>JIP_CAEEL (P34609) JNK-interacting protein (JIP) (JNK MAP kinase scaffold|
           protein) (Uncoordinated protein 16)
          Length = 1157

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +1

Query: 46  DLSENGLDSVDGPSVVPEKT--RSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGR 219
           D+ ++  D++  P    E T  R      +S+EE+  +          + +G   T  GR
Sbjct: 275 DIPQSSADALTSPITTKEPTPKREAASPKQSEEEEADETTSVDPKENNDLLGADLTGMGR 334

Query: 220 DVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSE 327
           +V +   E  + LD+K+      +   + VD+ +SE
Sbjct: 335 EVENLIKENSELLDMKNALNIVKNDLINQVDELNSE 370

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>CEBPZ_MOUSE (P53569) CCAAT/enhancer-binding protein zeta (CCAAT-box-binding|
            transcription factor) (CCAAT-binding factor) (CBF)
          Length = 1052

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
 Frame = +1

Query: 7    DTSSVAPTVDEDNDLSENGL--------DSVDGPSVVPEKTRSNTDNLESQEEDEPKFAG 162
            D  S+    DED ++ E+G         +S D P       ++NT   + + ED+  FAG
Sbjct: 898  DEVSLGSMNDEDFEIDEDGGTFMDVSDDESEDAPEFADANPKANTKKSKRKSEDDFDFAG 957

Query: 163  DQQ 171
              Q
Sbjct: 958  SFQ 960

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>JHD3A_MOUSE (Q8BW72) JmjC domain-containing histone demethylation protein 3A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2A)
          Length = 1064

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 23/127 (18%)
 Frame = +1

Query: 82  PSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDA----CTEQL 249
           P+ V  +   N    E  EEDEP+ A    S     VG      G     +     T   
Sbjct: 459 PTEVKFEELKNVKLEEEDEEDEPEAAALDLSVNPASVGGRLVFSGSKKKSSSSLGSTSSQ 518

Query: 250 DNLDIKSETEEGVSV-------------------SASFVDDESSEQSWALRSLSESTVAC 372
           D++   SET E VS                     A+  +    ++  A RS+SE  +A 
Sbjct: 519 DSVSSDSETAESVSCQGQEKTGVLTVHSYARGDGKAATGEPSVKKKRSAPRSISEQELAE 578

Query: 373 VTSDYAM 393
           V  +Y +
Sbjct: 579 VADEYML 585

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>SWC3_KLULA (Q6CKU6) SWR1-complex protein 3|
          Length = 758

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 7   DTSSVAPTVDEDN-DLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGD 165
           D+SS   + +EDN   ++N +D+ D   V  EK  +NTD    +  D+ K  G+
Sbjct: 498 DSSSSDESDNEDNTSQTKNSIDNTDD-GVTSEKADTNTDVSSDKPPDDIKSEGE 550

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>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2|
          Length = 731

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
 Frame = +1

Query: 34  DEDNDLSENGL----------DSVDGPSVVPEKTRSNTDNLESQEEDE 147
           DED D  E  L          D+VDG   V E  +  TD+ E  +E+E
Sbjct: 607 DEDEDEEEEELAWEDVFPEEADAVDGGEEVEESDKEETDDEEDVDEEE 654

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>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 808

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 31/132 (23%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
 Frame = +1

Query: 1   SFDTSSVAPTVDE-----DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGD 165
           S D S  A + D      D D+SE   D  D   +   K    +D  E +EED      D
Sbjct: 125 SNDDSDAAKSGDSEEDEMDVDMSEGDGDEEDENEIESLKREDESDEEEEEEED------D 178

Query: 166 QQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALR 345
               GEN           +V D+ +E  +    +   ++    S     D +   S+   
Sbjct: 179 YDEEGEN-----------EVVDSDSESEEETAAEIARKDAFFSSDPTTTDPTLPSSFTAM 227

Query: 346 SLSESTVACVTS 381
           +LS   +  +TS
Sbjct: 228 NLSRPLLRALTS 239

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>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)|
          Length = 1845

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           D +S  P+V  D   S+   D              + DN+ S E+D+ K     +   + 
Sbjct: 564 DLASGMPSVMGDEKESDEHSDQGSDEMSDENDEDEDEDNMSSSEDDDKKSTASDEGLTQE 623

Query: 187 GV----GNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQS 333
            +     N  T+   D T+  T+ ++  D  +  +  V+      DD++S++S
Sbjct: 624 ELRAKYANLPTLGTTDETEETTKDVEMADAPAAMDGSVA-----NDDDTSDES 671

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>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)|
          Length = 754

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
 Frame = +1

Query: 40  DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDE-----PKFA--GDQQSNGENGVGN 198
           D+D  +  +D     ++   +  S+ D  ES+EED+     P FA    Q  N ++  G+
Sbjct: 168 DSDDEDLAIDGFGAGAIAENEDESSQDESESEEEDDITEPVPSFANISTQDFNSDSAAGS 227

Query: 199 AYTIEGRD 222
           + + E  +
Sbjct: 228 SDSEEDEE 235

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>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog|
          Length = 1817

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 43/154 (27%)
 Frame = +1

Query: 55   ENGLDSVDGP----------SVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNA- 201
            ENGL++ D            SV P ++   TDN ++  E      G  + + E G+GN  
Sbjct: 949  ENGLNTTDKSGISQNSHFRQSVSPLRSSIKTDNRKTLTE------GRFEKHTERGMGNET 1002

Query: 202  ------YTIEGRDVTDACTE------------------QLDN--------LDIKSETEEG 285
                  +TI   +  DAC E                  QLD         + +   T+ G
Sbjct: 1003 AVQSTIHTISLNNRGDACLEASSGSVIEVHSTGENVQGQLDRNRGPKVNTVSLLDSTQPG 1062

Query: 286  VSVSASFVDDESSEQSWALRSLSESTVACVTSDY 387
            VS  ++ V D+  E     +++S     C+ SD+
Sbjct: 1063 VSKQSAPVSDKYLEIKQESKAVSADFSPCLFSDH 1096

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>RPOB_SALTY (P06173) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1342

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = +1

Query: 118 DNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKS-----ETEE 282
           DN    E    +  G+  S      G  Y  +GR +T     QL+  DIK      E   
Sbjct: 234 DNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIA 293

Query: 283 GVSVSASFVDDESSE 327
           G  VS  +VD+ + E
Sbjct: 294 GKVVSKDYVDESTGE 308

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>RPOB_SALTI (Q8Z320) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1342

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = +1

Query: 118 DNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKS-----ETEE 282
           DN    E    +  G+  S      G  Y  +GR +T     QL+  DIK      E   
Sbjct: 234 DNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIA 293

Query: 283 GVSVSASFVDDESSE 327
           G  VS  +VD+ + E
Sbjct: 294 GKVVSKDYVDESTGE 308

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>RPOB_SALPA (Q5PK93) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1342

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = +1

Query: 118 DNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKS-----ETEE 282
           DN    E    +  G+  S      G  Y  +GR +T     QL+  DIK      E   
Sbjct: 234 DNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIA 293

Query: 283 GVSVSASFVDDESSE 327
           G  VS  +VD+ + E
Sbjct: 294 GKVVSKDYVDESTGE 308

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>RPOB_SALCH (Q57H69) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1342

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = +1

Query: 118 DNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGRDVTDACTEQLDNLDIKS-----ETEE 282
           DN    E    +  G+  S      G  Y  +GR +T     QL+  DIK      E   
Sbjct: 234 DNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIA 293

Query: 283 GVSVSASFVDDESSE 327
           G  VS  +VD+ + E
Sbjct: 294 GKVVSKDYVDESTGE 308

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>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin|
           matrix protein 1) (DMP-1)
          Length = 510

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
 Frame = +1

Query: 34  DEDNDLSENGLDSV--DGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYT 207
           ++D+D  E+G D+   D     PE+ RS  D+    +ED       ++ +   G      
Sbjct: 101 NKDDDEDESGDDTFGDDDGGPGPEERRSGGDSRLGSDEDSADTTRSREDSTPQG------ 154

Query: 208 IEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSW 336
            EG   T + +  LD  D  +   EG         D  SE+ W
Sbjct: 155 DEGARDTTSESRDLDREDEGNSRPEG----GDSTPDSDSEEHW 193

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>RPO6_MIMIV (Q5UQ32) DNA-directed RNA polymerase subunit 6 (EC 2.7.7.6)|
          Length = 396

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
 Frame = +1

Query: 25  PTVDEDNDLSENGLDS---VDGPSVVPEKTR---SNTDNLESQEEDEPKFAGDQQSNGEN 186
           P  DED D S    D      G S  P+      S T +++  +E E    GD++ N  +
Sbjct: 37  PPSDEDLDNSGGSDDENTQSGGLSDAPDDELGEDSATLDIDPDDEAEYDTDGDEKFNPID 96

Query: 187 GVG------NAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDD--ESSEQSWAL 342
            +G      +    E  +V D  +E +DN++I+ +  +   +    VD+   S  +   +
Sbjct: 97  EMGEPEDPDDPSEQEEDEVEDLGSEDVDNVEIEDDAADIEDLDPELVDEARNSKSKQCYM 156

Query: 343 RSLSESTVACVTSDYAMQNVI 405
           ++L++  +A    D  + + I
Sbjct: 157 KNLNKDFIALDEDDSGIYSKI 177

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>PSTB1_BACSU (P46342) Phosphate import ATP-binding protein pstB 1 (EC 3.6.3.27)|
           (Phosphate-transporting ATPase 1) (ABC phosphate
           transporter 1)
          Length = 260

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 55  ENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGEN 186
           EN + ++ GPS   + T   T NL  Q     K AG+   NG N
Sbjct: 38  ENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSN 81

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>SPRL1_RAT (P24054) SPARC-like protein 1 precursor (Matrix glycoprotein Sc1)|
          Length = 634

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +1

Query: 7   DTSSVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGE 183
           + S   P  D      E+G  + D  +    K      N E +EE++P+  G    N E
Sbjct: 149 EESQEQPVSDSHQQQDESGKQTQDSMTEESHKQDPGIPNEEKEEEEDPEDVGAPSDNQE 207

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>SIMA_DROME (Q24167) Protein similar|
          Length = 1507

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 40   DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEP 150
            D+ + EN L  +DG S  P K  S+T N  +Q E  P
Sbjct: 1392 DSGIDENSL--MDGASGSPRKRLSSTSNSTNQAESAP 1426

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
            SR-like protein RA4)
          Length = 1147

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = +1

Query: 22   APTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNA 201
            +P  D   DL E    S    S   ++ R + D    +E++E +  G ++    +  G  
Sbjct: 1037 SPDRDRHRDLEERNRRS----SGHRDRERDSRDRESRREKEEAR--GKEKPEVTDRAGGN 1090

Query: 202  YTIEGRDVTDACTEQLDNLDIKSETEEGVSVSA 300
             T+E          Q+ N+D  SE E+GVS +A
Sbjct: 1091 KTVEPP------ISQVGNVDTASELEKGVSEAA 1117

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>VGLB_BHV2B (P12641) Glycoprotein B-1 precursor|
          Length = 917

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 104 QGQILTTWNLRKRMNPNLLEINNLMGRMGLAML 202
           Q Q LT WN  K++NP+ +    L  R+   ML
Sbjct: 550 QNQELTLWNEAKKINPSAIASVTLHRRVSACML 582

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>SA155_YEAST (P43612) SIT4-associating protein SAP155|
          Length = 1002

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 26/115 (22%), Positives = 42/115 (36%)
 Frame = +1

Query: 22  APTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNA 201
           A TVD +N +       +D  S       S+T+  E +E+D       ++  G +  GN 
Sbjct: 200 ATTVDLNNLIDYQEQQQLDDSSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGN- 258

Query: 202 YTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDESSEQSWALRSLSESTV 366
                    D      D+ D   + E      A+ + +  S   W    +SES V
Sbjct: 259 ---------DDINNNDDDDDANEDDESAYLTKATIISEIFSLDIWL---ISESLV 301

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>PCDBC_HUMAN (Q9Y5F1) Protocadherin beta 12 precursor (PCDH-beta12)|
          Length = 795

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
 Frame = +1

Query: 40  DNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVGNAYTIEGR 219
           D D  +NG      P  +P   +S+ +N  + E + P    D++S  E  +    TI   
Sbjct: 372 DRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPL---DRESRAEYNI----TI--- 421

Query: 220 DVTDACTEQLDNLDIKSETEEGVSVSASFVDDES---SEQSWAL 342
            VTD  T +L       +TE  ++V  S V+D +   ++ S+AL
Sbjct: 422 TVTDLGTPRL-------KTEHNITVLVSDVNDNAPAFTQTSYAL 458

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>MMAA_MOUSE (Q8C7H1) Methylmalonic aciduria type A homolog, mitochondrial|
          precursor
          Length = 415

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 8  IQVLLLQQSMRIMTCLKMVWIPWM 79
          I  LLL  + R++TCL  V  PW+
Sbjct: 3  ISTLLLSPNRRLLTCLSRVPSPWL 26

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>VGLB_SHV1 (Q04464) Glycoprotein B precursor|
          Length = 920

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 104 QGQILTTWNLRKRMNPNLLEINNLMGRMGLAML 202
           Q Q L  WN  +++NPN +    +  R+G  ML
Sbjct: 541 QNQELVLWNEARKLNPNAIASATVGRRVGARML 573

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>UNC33_CAEEL (Q01630) Uncoordinated protein 33 (Protein unc-33)|
          Length = 854

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
 Frame = +1

Query: 52  SENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAG-----DQQSNGENGVGNAYTIEG 216
           S N  +S+ GP +            E+QE +EP++       D   NG +     +  E 
Sbjct: 224 SFNPAESLPGPDIGAGVDDEEEPEAEAQEMEEPQYESKVDEKDDDDNGSSSSKKGHPSED 283

Query: 217 RDVTDACTEQLD--NLDIKSETEEGVSVSASFVDDESS 324
            D T       D  N     ET +G S + S  + ++S
Sbjct: 284 GDSTRNGETPTDRRNSGAIEETADGESSAQSAAEKKNS 321

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>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2124

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/100 (24%), Positives = 42/100 (42%)
 Frame = +1

Query: 16   SVAPTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDEPKFAGDQQSNGENGVG 195
            +V PT  E+ + S +G++ V G     E   ++   +E       +  G + S     V 
Sbjct: 1044 TVLPTGRENLETSASGVEDVSGLPSGKEGLETSASGIEDISVFPTEAEGLETSASGGYVS 1103

Query: 196  NAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDD 315
               +  G D T+  T  ++ +       EG+  SAS V+D
Sbjct: 1104 GIPS--GEDGTETSTSGVEGVSGLPSGGEGLETSASGVED 1141

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>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112|
          Length = 2799

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -2

Query: 383  SLVTHATVDSDKDLRAQLCSLLSSSTKDALTLTPSSVSLFISKLSNCSVHASVTSLPSIV 204
            S  T ATV SD   R  L S L SS     T+T  + +L ++ +    ++A  TS   +V
Sbjct: 1506 SAFTPATVSSDTSTRVGLFSTLLSSVTPRTTMTMQTSTLDVTPV----IYAGATSKNKMV 1561

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>YA2G_SCHPO (Q09706) Hypothetical protein C2F7.16c in chromosome I|
          Length = 1369

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +1

Query: 97  EKTRSNTD-NLESQEEDEPKFAGDQQ--SNGENGVGNAYTIEGRDVTDACTEQLDNLDIK 267
           ++T S +D + ES  +D  +  G  +  +NG    GN +TI+G  +     E + NL   
Sbjct: 307 DETHSISDISWESHSQDGDRTTGQPRHANNGRKKHGNFWTIQGNTLGVYLQEMIHNLQFF 366

Query: 268 SETEEGVSVSASFVDDES 321
            E    V+V  SF++  S
Sbjct: 367 PE----VNVLYSFLEFSS 380

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>SEC16_SCHPO (O14029) Multidomain vesicle coat protein|
          Length = 1995

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
 Frame = +1

Query: 25  PTVDEDNDLSENGLDSVDGPSVVPEKTRSNTDNLESQEEDE----PKFAGDQQSNGENGV 192
           P VDED+ LSE  L   D  + +      ++   E  + DE    P     ++      V
Sbjct: 143 PVVDEDDKLSEEDLSKEDLETTLKGDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSV 202

Query: 193 GNAYTIEGRDVTDACTEQLDNLDIKSETEE 282
            NAY           ++  D LD++ +T +
Sbjct: 203 ENAYITN--------SQYNDTLDMEDQTSD 224

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>GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 905

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 181 ENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDE 318
           ENG G   +  G  +TD     + N+DI  +T   V V    +DDE
Sbjct: 792 ENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDE 837

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>GYRA_RICCN (Q92IZ6) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 905

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 181 ENGVGNAYTIEGRDVTDACTEQLDNLDIKSETEEGVSVSASFVDDE 318
           ENG G   +  G  +TD     + N+DI  +T   V V    +DDE
Sbjct: 792 ENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDE 837


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.300    0.121    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,899,103
Number of Sequences: 219361
Number of extensions: 1105514
Number of successful extensions: 2395
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2378
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result