| Clone Name | bags20o11 |
|---|---|
| Clone Library Name | barley_pub |
>VSR1_ARATH (P93026) Vacuolar sorting receptor 1 precursor (AtVSR1) (Epidermal| growth factor receptor-like protein 1) (AtELP1) (AtELP) (BP80-like protein b) (AtBP80b) (Spot 3 protein) Length = 623 Score = 356 bits (913), Expect = 3e-98 Identities = 152/192 (79%), Positives = 177/192 (92%) Frame = +1 Query: 7 ESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWYC 186 ES+PHPDERVEYE WTNSNDECG KCD Q++F+K+F+G AQ+LE+ G+TQFTPHYITWYC Sbjct: 177 ESVPHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYC 236 Query: 187 PEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPWL 366 PEAFT+SKQCKSQCINHGRYCAPDPEQDF+KGYDGKDVVVQNL Q CV++V NDTGKPW+ Sbjct: 237 PEAFTLSKQCKSQCINHGRYCAPDPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWV 296 Query: 367 WWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQDA 546 WWDYV DFAIRCPMKEKKYT +CA +IKSLG+D++K++KC+GDPEAD ENP+LKAEQ++ Sbjct: 297 WWDYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIGDPEADVENPVLKAEQES 356 Query: 547 QIGHGKRGDVTI 582 QIG G RGDVTI Sbjct: 357 QIGKGSRGDVTI 368
>VSR4_ARATH (Q56ZQ3) Vacuolar sorting receptor 4 precursor (AtVSR4) (Epidermal| growth factor receptor-like protein 2b) (AtELP2b) (BP80-like protein a) (AtBP80a) Length = 628 Score = 342 bits (878), Expect = 4e-94 Identities = 148/193 (76%), Positives = 170/193 (88%) Frame = +1 Query: 4 RESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWY 183 RE++PHPD+RVEYE WTNSNDECG KCDM M+FVK F+G AQ+LE+ G+TQF PHYITWY Sbjct: 181 REAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWY 240 Query: 184 CPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPW 363 CP AFT+S+QCKSQCIN GRYCAPDPEQDFS GYDGKDVVV+NL Q+CV+KVAN+TGKPW Sbjct: 241 CPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPW 300 Query: 364 LWWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQD 543 +WWDYV DF IRCPMKEKKY DCA VIKSLG+D KI+KC+GDP+AD +NP+LK EQD Sbjct: 301 VWWDYVTDFQIRCPMKEKKYNKDCAESVIKSLGIDSRKIDKCMGDPDADLDNPVLKEEQD 360 Query: 544 AQIGHGKRGDVTI 582 AQ+G G RGDVTI Sbjct: 361 AQVGKGTRGDVTI 373
>VSR3_ARATH (O80977) Vacuolar sorting receptor 3 precursor (AtVSR3) (Epidermal| growth factor receptor-like protein 2a) (AtELP2a) (BP80-like protein a') (AtBP80a') Length = 628 Score = 341 bits (874), Expect = 1e-93 Identities = 146/193 (75%), Positives = 171/193 (88%) Frame = +1 Query: 4 RESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWY 183 RE++PHPD+RVEYE WTNSNDECG KCDM M+FVK F+G AQ+LE+ G+TQF PHYITWY Sbjct: 181 REAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWY 240 Query: 184 CPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPW 363 CP AFT+S+QCKSQCIN GRYCAPDPEQDFS GYDGKDVVV+NL Q+CV+KVAN+TGKPW Sbjct: 241 CPHAFTLSRQCKSQCINKGRYCAPDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPW 300 Query: 364 LWWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQD 543 +WWDYV DF IRCPMKEKKY +CA VIKSLG+D +K++KC+GDP+AD +NP+LK EQD Sbjct: 301 VWWDYVTDFQIRCPMKEKKYNKECADSVIKSLGIDSKKLDKCMGDPDADLDNPVLKEEQD 360 Query: 544 AQIGHGKRGDVTI 582 AQ+G G RGDVTI Sbjct: 361 AQVGKGSRGDVTI 373
>VSR1_PEA (P93484) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa| proaleurein-binding protein) Length = 623 Score = 340 bits (873), Expect = 1e-93 Identities = 150/193 (77%), Positives = 170/193 (88%) Frame = +1 Query: 4 RESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWY 183 RE++PHPD+RVEYE WTNSNDECG KCDM ++F+K F+G AQ+LE+ GYTQFTPHYITWY Sbjct: 176 REAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWY 235 Query: 184 CPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPW 363 CP AFT+SKQCKSQCINHGRYCAPDPEQDF+ GYDGKDVVV+NL Q+CVFKVA +T K W Sbjct: 236 CPHAFTLSKQCKSQCINHGRYCAPDPEQDFNTGYDGKDVVVENLRQLCVFKVAKETEKSW 295 Query: 364 LWWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQD 543 +WWDYV DF IRCPMKEKKY +CA+ VIKSLGLD+EKI+KC+GDP AD EN ILK EQD Sbjct: 296 VWWDYVTDFQIRCPMKEKKYNKECANSVIKSLGLDVEKIDKCMGDPNADTENSILKEEQD 355 Query: 544 AQIGHGKRGDVTI 582 AQIG G RGDVTI Sbjct: 356 AQIGKGTRGDVTI 368
>VSR2_ARATH (O22925) Vacuolar sorting receptor 2 precursor (AtVSR2) (Epidermal| growth factor receptor-like protein 4) (AtELP4) (BP80-like protein c) (AtBP80c) Length = 625 Score = 322 bits (824), Expect = 7e-88 Identities = 137/193 (70%), Positives = 166/193 (86%) Frame = +1 Query: 4 RESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWY 183 RE+LPHP++RV YE WTNSNDECG KCD Q+ F+K F+G AQ+LE+ GYT+FTPHYITWY Sbjct: 180 REALPHPNDRVAYELWTNSNDECGSKCDAQIRFLKRFKGAAQILEKGGYTRFTPHYITWY 239 Query: 184 CPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPW 363 CPEAF S+QCK+QCIN GRYCAPDPEQDFS+GY+GKDV++QNL Q C F+V N++GKPW Sbjct: 240 CPEAFLASRQCKTQCINGGRYCAPDPEQDFSRGYNGKDVIIQNLRQACFFRVTNESGKPW 299 Query: 364 LWWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQD 543 LWWDYV DFAIRCPMKE+KY CA VI+SLG+D++KI+KC+GD +A+ ENP+LK EQ Sbjct: 300 LWWDYVTDFAIRCPMKEEKYNKKCADQVIQSLGVDVKKIDKCIGDIDANAENPVLKEEQV 359 Query: 544 AQIGHGKRGDVTI 582 AQ+G G RGDVTI Sbjct: 360 AQVGKGSRGDVTI 372
>VSR7_ARATH (Q8L7E3) Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal| growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f) Length = 625 Score = 310 bits (793), Expect = 3e-84 Identities = 135/193 (69%), Positives = 160/193 (82%) Frame = +1 Query: 4 RESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWY 183 RES+PHPD+RVEYE WTNSNDECG +CD QMDFVK+F+G AQ+LE+ GYT FTPHYITW+ Sbjct: 179 RESVPHPDKRVEYELWTNSNDECGARCDEQMDFVKNFKGHAQILEKGGYTAFTPHYITWF 238 Query: 184 CPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPW 363 CP F S CKSQCINHGRYCAPDPE +F +GY+GKDVV++NL Q+CV +VAN++ +PW Sbjct: 239 CPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKDVVLENLRQLCVHRVANESSRPW 298 Query: 364 LWWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQD 543 +WWDYV DF RC MKEKKY+ DCA VIKSL L +EKI KC+GDPEAD EN +L+ EQ Sbjct: 299 VWWDYVTDFHSRCSMKEKKYSIDCAESVIKSLNLPIEKIKKCIGDPEADTENQVLRTEQV 358 Query: 544 AQIGHGKRGDVTI 582 +QIG G RGDVTI Sbjct: 359 SQIGRGNRGDVTI 371
>VSR6_ARATH (Q9FYH7) Vacuolar sorting receptor 6 precursor (AtVSR6) (Epidermal| growth factor receptor-like protein 6) (AtELP6) (BP80-like protein d) (AtBP80d) Length = 622 Score = 304 bits (779), Expect = 1e-82 Identities = 130/192 (67%), Positives = 158/192 (82%) Frame = +1 Query: 7 ESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWYC 186 ESLPHPDERVEYE WTN+NDECG +CD QM+FVK+F+G AQ+LE+ GY+ FTPHYITW+C Sbjct: 179 ESLPHPDERVEYELWTNTNDECGARCDEQMNFVKNFKGHAQILEKGGYSLFTPHYITWFC 238 Query: 187 PEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPWL 366 P+ + S QCKSQCIN GRYCAPDPEQDF GYDGKD+V +NL Q+CV KVA + + W+ Sbjct: 239 PKDYVSSNQCKSQCINQGRYCAPDPEQDFGDGYDGKDIVFENLRQLCVHKVAKENNRSWV 298 Query: 367 WWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQDA 546 WWDYV DF IRC MKEKKY+ +CA V++SLGL ++KI KC+GDP+A+ EN +LKAEQ Sbjct: 299 WWDYVTDFHIRCSMKEKKYSKECAERVVESLGLPLDKIKKCIGDPDANVENEVLKAEQAL 358 Query: 547 QIGHGKRGDVTI 582 Q+G G RGDVTI Sbjct: 359 QVGQGDRGDVTI 370
>VSR5_ARATH (O64758) Vacuolar sorting receptor 5 precursor (AtVSR5) (Epidermal| growth factor receptor-like protein 5) (AtELP5) (BP80-like protein e) (AtBP80e) Length = 618 Score = 275 bits (704), Expect = 5e-74 Identities = 118/192 (61%), Positives = 150/192 (78%) Frame = +1 Query: 7 ESLPHPDERVEYEFWTNSNDECGPKCDMQMDFVKSFRGTAQVLEQKGYTQFTPHYITWYC 186 ES+P+PDERVEYE W N+NDECG CD Q+DF+K+F+G AQ+LE+ GYT F PHYI+W C Sbjct: 178 ESIPNPDERVEYELWANTNDECGVHCDKQIDFIKNFKGMAQILEKGGYTLFRPHYISWVC 237 Query: 187 PEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPWL 366 P+ +SKQC++QCIN GRYCA D +Q+F GY+GKDVV +NL Q+CV KVA + W+ Sbjct: 238 PKELLLSKQCRTQCINQGRYCALDTKQEFEDGYNGKDVVYENLRQLCVHKVAKEKNTSWV 297 Query: 367 WWDYVHDFAIRCPMKEKKYTHDCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQDA 546 WWDYV DF IRC MKEKKY+ +CA +++SLGL +EKI KC+GDP+AD EN +LKAE+ Sbjct: 298 WWDYVTDFNIRCSMKEKKYSRECAETIVESLGLSLEKIKKCIGDPDADVENEVLKAEEAF 357 Query: 547 QIGHGKRGDVTI 582 Q+G RG VTI Sbjct: 358 QLGQENRGIVTI 369
>C71D8_SOYBN (O81974) Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7)| Length = 504 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = -3 Query: 423 VFLLLHW---ASNGKVMYIIPPQPWLASVIGNL 334 VFLLLHW K + +PP PW +IGNL Sbjct: 14 VFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNL 46
>SEN2_HUMAN (Q8NCE0) tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9)| (tRNA-intron endonuclease Sen2) (HsSen2 protein) Length = 465 Score = 32.3 bits (72), Expect = 1.0 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = +1 Query: 250 APDPEQDFSKGYDGKDVVVQNLHQVCVFKVANDTGKPWLWWDYVHDFAIRCPMKEKKYTH 429 A D EQ + KGY GK ++ ++ + +D W D + I + K+Y H Sbjct: 54 AEDIEQLYGKGYFGKGILSRSRPSFTI----SDPKLVAKWKDMKTNMPI---ITSKRYQH 106 Query: 430 --DCASHVIKSLGLDMEKINKCVGDPEADEENPILKAEQDAQI 552 + A+ +++ G D + + + D E+P +K ++AQ+ Sbjct: 107 SVEWAAELMRRQGQDESTVRRILKDYTKPLEHPPVKRNEEAQV 149
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 132 NLCSSSEALHKIHLHITFRTTFIITVCPEFILY 34 N+ S + + +HLH TF TFI+ VCP F ++ Sbjct: 613 NMLSFYDPANSLHLH-TFDVTFILPVCPTFTIW 644
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 132 NLCSSSEALHKIHLHITFRTTFIITVCPEFILY 34 N+ S + + +HLH TF TFI+ VCP F ++ Sbjct: 643 NMLSFYDPANSLHLH-TFDVTFILPVCPTFTIW 674
>EXOC1_HUMAN (Q9NV70) Exocyst complex component 1 (Exocyst complex component Sec3)| Length = 893 Score = 31.2 bits (69), Expect = 2.3 Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 15/97 (15%) Frame = +1 Query: 322 VCVFKVANDTGKP----WLWWDYVHDFA------IRCPMKEKK-----YTHDCASHVIKS 456 V V KVAN++ K + ++ H FA I C EKK YT S+VI S Sbjct: 710 VNVEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYS 769 Query: 457 LGLDMEKINKCVGDPEADEENPILKAEQDAQIGHGKR 567 LG +EK+N EA I + E Q+ K+ Sbjct: 770 LGQPLEKLNHFFEGVEARVAQGIREEEVSYQLAFNKQ 806
>PHS2_CHICK (Q9DG45) Pterin-4-alpha-carbinolamine dehydratase 2 (EC 4.2.1.96)| (PHS 2) (4-alpha-hydroxy-tetrahydropterin dehydratase 2) (DcoH-like protein DCoHm) (Hepatocyte nuclear factor 1a dimerization cofactor isoform) (DCoH-alpha) Length = 103 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 254 LTQSRISAKDMMERMSWSRIYIKSVYSRLPMTLASHGCGGI 376 +T+ + A++M W +VYS++ +TL SH CGG+ Sbjct: 50 MTRVALQAENMNHHPEWF-----NVYSKVQITLISHDCGGL 85
>EXOC1_MOUSE (Q8R3S6) Exocyst complex component 1 (Exocyst complex component| Sec3) Length = 893 Score = 30.8 bits (68), Expect = 3.0 Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%) Frame = +1 Query: 328 VFKVANDTGKP----WLWWDYVHDFA------IRCPMKEKK-----YTHDCASHVIKSLG 462 V KVAN++ K + ++ H FA I C EKK YT S+VI SLG Sbjct: 712 VEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLG 771 Query: 463 LDMEKINKCVGDPEADEENPILKAEQDAQIGHGKR 567 +EK+N EA I + E Q+ K+ Sbjct: 772 QPLEKLNHFFEGVEARVAQGIREEEVSYQLAFNKQ 806
>YK9B_SHIFL (P37790) Hypothetical protein SF2091.1/S2213 (ORF12X8)| Length = 119 Score = 30.4 bits (67), Expect = 3.9 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +1 Query: 40 YEFWTNSNDECG--PKCDMQMDFVKSFRGTAQVLEQKGYTQFTP 165 Y WT SN EC P+ D+ ++ +KSF + V+ ++ Y F P Sbjct: 56 YSDWTISNPECEVIPQDDL-IEKMKSFNSSFIVISKRSYANFNP 98
>GRP78_ECHMU (Q24895) 78 kDa glucose-regulated protein precursor (GRP 78)| Length = 649 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/83 (22%), Positives = 36/83 (43%) Frame = +1 Query: 118 GTAQVLEQKGYTQFTPHYITWYCPEAFTVSKQCKSQCINHGRYCAPDPEQDFSKGYDGKD 297 G +++ + TP Y+ + + K+Q ++ + D ++ + YD KD Sbjct: 48 GRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAKRLIGRDYDDKD 107 Query: 298 VVVQNLHQVCVFKVANDTGKPWL 366 VQ + FKV N KP++ Sbjct: 108 --VQGDIKRYPFKVINKNNKPYM 128
>ATG22_CANGA (Q6FX92) Autophagy-related protein 22| Length = 541 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = -3 Query: 180 PCNIMRSELCVTLLLKN---LCSSSEALHKIHLHITFRTTFIITV 55 PC+ S+ CV L N + SSS AL+ L + F+T +I+V Sbjct: 79 PCSTSSSDKCVLGLFNNRVFVDSSSFALYVFSLSVLFQTVVVISV 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,611,799 Number of Sequences: 219361 Number of extensions: 2214195 Number of successful extensions: 5402 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5401 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)