ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21d04 |
|---|---|
| Clone Library Name | barley_pub |
>CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial precursor| (Clone PC18I) (Fragment) Length = 260 Score = 270 bits (690), Expect = 2e-72 Identities = 128/139 (92%), Positives = 131/139 (94%) Frame = +1 Query: 136 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 315 F T+ASADEAEHGL YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL+SYRDL Sbjct: 11 FATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSYRDL 70 Query: 316 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPP 495 VGVAYTEEE KAMAAEIEV DGPNDEGEMFTRPGKLSDRFPQPYPNE AARFANGGAYPP Sbjct: 71 VGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYPNEAAARFANGGAYPP 130 Query: 496 DLSLITKARHDGQNYVFAL 552 DLSLITKARH+GQNYVFAL Sbjct: 131 DLSLITKARHNGQNYVFAL 149
>CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial precursor| (Clone PC13III) Length = 320 Score = 266 bits (681), Expect = 2e-71 Identities = 128/139 (92%), Positives = 130/139 (93%) Frame = +1 Query: 136 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 315 F TIA +DEAEHGL YPWPH GILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL Sbjct: 71 FATIAYSDEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 130 Query: 316 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPP 495 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPY NE AARFANGGAYPP Sbjct: 131 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPP 190 Query: 496 DLSLITKARHDGQNYVFAL 552 DLSLITKARH+GQNYVFAL Sbjct: 191 DLSLITKARHNGQNYVFAL 209
>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor| (Cytochrome c-1) Length = 325 Score = 190 bits (483), Expect = 2e-48 Identities = 90/134 (67%), Positives = 105/134 (78%) Frame = +1 Query: 151 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 330 SA + E L YPW H G+LSS DH SIRRG QVY+QVC+SCHSM ++YR LVGV Y Sbjct: 83 SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCY 140 Query: 331 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLI 510 TEEE KA+A E+EV DGPND+GEMF RPGKLSD FP+PYPN +AAR AN GA PPDLS I Sbjct: 141 TEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYI 200 Query: 511 TKARHDGQNYVFAL 552 +ARH G++YVF+L Sbjct: 201 VRARHGGEDYVFSL 214
>CY1_HUMAN (P08574) Cytochrome c1, heme protein, mitochondrial precursor| (Cytochrome c-1) Length = 325 Score = 187 bits (475), Expect = 2e-47 Identities = 88/134 (65%), Positives = 104/134 (77%) Frame = +1 Query: 151 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 330 SA + E L YPW H G+LSS DH SIRRG QVY+QVCASCHSM ++YR LVGV Y Sbjct: 83 SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCY 140 Query: 331 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLI 510 TE+E K +AAE+EV DGPN++GEMF RPGKL D FP+PYPN +AAR AN GA PPDLS I Sbjct: 141 TEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAANNGALPPDLSYI 200 Query: 511 TKARHDGQNYVFAL 552 +ARH G++YVF+L Sbjct: 201 VRARHGGEDYVFSL 214
>CY1_BOVIN (P00125) Cytochrome c1, heme protein, mitochondrial (Cytochrome| c-1) Length = 241 Score = 187 bits (475), Expect = 2e-47 Identities = 84/121 (69%), Positives = 100/121 (82%) Frame = +1 Query: 190 YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIE 369 YPW H G+LSS DH SIRRG QVY+QVC+SCHSM ++YR LVGV YTE+E KA+A E+E Sbjct: 10 YPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDEAKALAEEVE 69 Query: 370 VVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKARHDGQNYVFA 549 V DGPN++GEMF RPGKLSD FP+PYPN +AAR AN GA PPDLS I +ARH G++YVF+ Sbjct: 70 VQDGPNEDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFS 129 Query: 550 L 552 L Sbjct: 130 L 130
>CY1_KLULA (Q00988) Cytochrome c1, heme protein, mitochondrial precursor| Length = 292 Score = 167 bits (423), Expect = 2e-41 Identities = 78/130 (60%), Positives = 98/130 (75%) Frame = +1 Query: 163 AEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEE 342 AEHGL A Y W H G L ++DH+SIRRG+QVY++VCA+CHS+ +++R +VGV++T E Sbjct: 50 AEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWRTMVGVSHTNAE 109 Query: 343 TKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKAR 522 +AMA E E D P+D+G RPGKL+D P PYPNEQAAR AN GA PPDLSLI KAR Sbjct: 110 VRAMAEEFEYDDEPDDQGNPKKRPGKLADYVPGPYPNEQAARAANQGALPPDLSLIVKAR 169 Query: 523 HDGQNYVFAL 552 H G +Y+FAL Sbjct: 170 HGGPDYIFAL 179
>CY1_YEAST (P07143) Cytochrome c1, heme protein, mitochondrial precursor| Length = 309 Score = 167 bits (422), Expect = 2e-41 Identities = 79/137 (57%), Positives = 99/137 (72%) Frame = +1 Query: 142 TIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVG 321 T + AEHGL A Y W H G ++DHASIRRG+QVY++VCA+CHS+ +++R LVG Sbjct: 58 TAEAMTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVG 117 Query: 322 VAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDL 501 V++T EE + MA E E D P+++G RPGKLSD P PYPNEQAAR AN GA PPDL Sbjct: 118 VSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDL 177 Query: 502 SLITKARHDGQNYVFAL 552 SLI KARH G +Y+F+L Sbjct: 178 SLIVKARHGGCDYIFSL 194
>CY1_NEUCR (P07142) Cytochrome c1, heme protein, mitochondrial precursor| Length = 332 Score = 165 bits (418), Expect = 7e-41 Identities = 78/139 (56%), Positives = 99/139 (71%) Frame = +1 Query: 136 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 315 +G ++ AE GL A +YPW H L ++DH ++RRG QVY++VCASCHS+S + YR L Sbjct: 65 YGFASAMTPAEEGLHATKYPWVHEQWLKTFDHQALRRGFQVYREVCASCHSLSRVPYRAL 124 Query: 316 VGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPP 495 VG T +E KA+A E E PND+GE+ RPGKLSD P PY N++AARFAN GA PP Sbjct: 125 VGTILTVDEAKALAEENEYDTEPNDQGEIEKRPGKLSDYLPDPYKNDEAARFANNGALPP 184 Query: 496 DLSLITKARHDGQNYVFAL 552 DLSLI KARH G +Y+F+L Sbjct: 185 DLSLIVKARHGGCDYIFSL 203
>CY1_RHORU (P23135) Cytochrome c1 precursor| Length = 272 Score = 134 bits (336), Expect = 2e-31 Identities = 60/134 (44%), Positives = 88/134 (65%) Frame = +1 Query: 151 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAY 330 +A E G++ + W GI YD ++RG QV+ +VC++CH M ++YR+L + + Sbjct: 21 AAQANEGGVSLHKQDWSWKGIFGRYDQPQLQRGFQVFHEVCSTCHGMKRVAYRNLSALGF 80 Query: 331 TEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLI 510 +E+ K +AAE E GP+D G+MFTRPG +D P P+ N++AA ANGGA PPDLSL+ Sbjct: 81 SEDGIKELAAEKEFPAGPDDNGDMFTRPGTPADHIPSPFANDKAAAAANGGAAPPDLSLL 140 Query: 511 TKARHDGQNYVFAL 552 KAR G NY+++L Sbjct: 141 AKARPGGPNYIYSL 154
>CYBC_BRAJA (P51131) Cytochrome b/c1 [Contains: Cytochrome b; Cytochrome c1]| Length = 687 Score = 133 bits (334), Expect = 4e-31 Identities = 61/118 (51%), Positives = 85/118 (72%), Gaps = 3/118 (2%) Frame = +1 Query: 196 WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMAAEI 366 W AG +D +++RG +VY++VCASCH +S I++R+L G +Y+ + A A++ Sbjct: 446 WSFAGPFGKFDRGALQRGLKVYKEVCASCHGLSYIAFRNLAEAGGPSYSVAQVAAFASDY 505 Query: 367 EVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKARHDGQNY 540 ++ DGPND G+MF RPG+ +D FP P+PNEQAAR ANGGA PPDLSLITKAR G+ + Sbjct: 506 KIKDGPNDAGDMFERPGRPADYFPSPFPNEQAARAANGGAAPPDLSLITKARSYGRGF 563
>CY1_EUGGR (P20114) Cytochrome c1, heme protein| Length = 243 Score = 128 bits (322), Expect = 1e-29 Identities = 64/120 (53%), Positives = 78/120 (65%) Frame = +1 Query: 193 PWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEV 372 PWPH D S+RRG +VY+QV A CHS+S I YR ++EE K MAA EV Sbjct: 10 PWPHFQWFQGLDWRSVRRGKEVYEQVFAPCHSLSFIKYRHFEAFM-SKEEVKNMAASFEV 68 Query: 373 VDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKARHDGQNYVFAL 552 D P+++GE RPGK D QPY NEQ AR+AN GA PPDLS+IT ARH G +Y++AL Sbjct: 69 DDDPDEKGEARKRPGKRFDTVVQPYKNEQEARYANNGALPPDLSVITNARHGGVDYIYAL 128
>CY1_RHOVI (P81379) Cytochrome c1 precursor| Length = 282 Score = 93.6 bits (231), Expect = 3e-19 Identities = 57/134 (42%), Positives = 71/134 (52%), Gaps = 17/134 (12%) Frame = +1 Query: 172 GLAAAEYP-------------WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 312 GLAAA P W AG YD A +RRG QV+Q VC SCH++ +R+ Sbjct: 16 GLAAASVPAQASGGDTPHLQSWSFAGPFGQYDKAQLRRGFQVFQNVCVSCHTLENGGFRN 75 Query: 313 LVGVA---YTEEETKAMAAEIEV-VDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANG 480 L A + +E + +AA V V ND+G+ R KL DR P Y NE AAR + Sbjct: 76 LPSRAAPNWPLDEVRQLAASWPVQVKDINDKGDPMQRAPKLPDRIPSQYANEAAARIIHN 135 Query: 481 GAYPPDLSLITKAR 522 GA PPDLS+I KAR Sbjct: 136 GAVPPDLSVIAKAR 149
>CY1_PARDE (P13627) Cytochrome c1 precursor| Length = 450 Score = 58.5 bits (140), Expect = 1e-08 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Frame = +1 Query: 148 ASADEAEHGLAAA---EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV 318 A+A EA AAA + + G +D ++RG QVY +VC++CH + + R L Sbjct: 201 AAAQEAGDSHAAAHIEDISFSFEGPFGKFDQHQLQRGLQVYTEVCSACHGLRYVPLRTLA 260 Query: 319 ---GVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAY 489 G E++ +A AA ++ D +E RP +D FP +G Sbjct: 261 DEGGPQLPEDQVRAYAANFDITDPETEE----DRPRVPTDHFPT----------VSGEGM 306 Query: 490 PPDLSLITKAR 522 PDLSL+ KAR Sbjct: 307 GPDLSLMAKAR 317
>CY1_RHOSH (Q02760) Cytochrome c1 precursor| Length = 285 Score = 56.2 bits (134), Expect = 6e-08 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = +1 Query: 187 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMA 357 + P+ G ++D ++RG QVY +VCA+CH M + R L G E++ +A A Sbjct: 30 DVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIRSLSEPGGPELPEDQVRAYA 89 Query: 358 AEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKAR 522 + V D E R GK +D FP A DLSL+ KAR Sbjct: 90 TQFTVTDEETGE----DREGKPTDHFPHSALENAA-----------DLSLMAKAR 129
>CY1_RHOCA (P08501) Cytochrome c1 precursor| Length = 279 Score = 53.9 bits (128), Expect = 3e-07 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Frame = +1 Query: 187 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLV---GVAYTEEETKAMA 357 ++ + GI YD A +RRG QVY +VC++CH M + R L G + A Sbjct: 27 DHAFSFEGIFGKYDQAQLRRGFQVYNEVCSACHGMKFVPIRTLADDGGPQLDPTFVREYA 86 Query: 358 AEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKAR 522 A ++ + D GE R K +D FP G PDLS++ KAR Sbjct: 87 AGLDTII-DKDSGE--ERDRKETDMFPTRV----------GDGMGPDLSVMAKAR 128
>CY1_CHRVI (O31216) Cytochrome c1 precursor| Length = 244 Score = 37.7 bits (86), Expect = 0.022 Identities = 26/107 (24%), Positives = 47/107 (43%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMF 405 D AS++RG + + C CHS+ + Y L +E +A ++ G G++ Sbjct: 35 DQASLQRGAKYFMNYCTGCHSLQYMRYNRLAKDLGIDE----IALRQNLLFGDAKPGDLI 90 Query: 406 TRPGKLSDRFPQPYPNEQAARFANGGAYPPDLSLITKARHDGQNYVF 546 T+ ++ A ++ G PPDL+L+T+ R Y + Sbjct: 91 TK----------AMTDDDALKWF--GVVPPDLTLVTRWRSPDWVYTY 125
>QCRC_MYCTU (P63887) Ubiquinol-cytochrome c reductase cytochrome c subunit| Length = 280 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +1 Query: 172 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 324 GLAA P P + A +R G Q++ C SCH +L D L+GV Sbjct: 40 GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94
>QCRC_MYCBO (P63888) Ubiquinol-cytochrome c reductase cytochrome c subunit| Length = 280 Score = 35.0 bits (79), Expect = 0.14 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +1 Query: 172 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 324 GLAA P P + A +R G Q++ C SCH +L D L+GV Sbjct: 40 GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 94
>QCRC_MYCLE (O69583) Ubiquinol-cytochrome c reductase cytochrome c subunit| Length = 289 Score = 34.7 bits (78), Expect = 0.19 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +1 Query: 172 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD----LVGV 324 GLAA P P + A +R G Q++ C SCH +L D L+GV Sbjct: 49 GLAAVLTPTPQVAVADEDSSALLRTGKQLFDTSCVSCHGANLQGVPDHGPSLIGV 103
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -2 Query: 250 VHGGLMRDRKS*GCQHAARGTLQLPNHARLHLQMLSYQNIKDQKHQLREEPMLSVQQRTL 71 V+ G + + + G Q+ +Q PN + HLQ +Q + Q+HQ ++ L QQ+ Sbjct: 502 VYAGSLLTQTANGIQYG----MQSPNQTQAHLQQQHHQQ-QQQQHQQHQQQQLQQQQQQH 556 Query: 70 H 68 H Sbjct: 557 H 557
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +1 Query: 337 EETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEQAARFANGGAY 489 +E++ A+E +V +G EG++ G +S+R P P+E+A F AY Sbjct: 111 DESEGDASEGDVSEGDESEGDV--SEGAVSERAEFPEPSEEAKLFVGNLAY 159
>MOAE_RHILO (Q984P0) Molybdopterin-converting factor subunit 2 (MPT synthase| subunit 2) (Molybdopterin synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit) Length = 159 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +1 Query: 160 EAEHGLAAAEYP--WPHAGILSSYDHASIRRGHQVYQQVCASCH 285 EAE G AAE WP G+ + H IR G + V AS H Sbjct: 62 EAEIGRIAAEAVERWPLQGLTVIHRHGKIRPGENIVLVVAASAH 105
>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,| arginine/serine-rich 2-interacting protein) (SC35-interacting protein 1) (CTD-associated SR protein 11) (Splicing regulatory protein 129) (SRrp129) (NY-REN-40 antigen) Length = 1148 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 131 KRPEAPTPRRANALSPAEDSSCFPRNEESR 42 KRP++P+PRR + S P+NE +R Sbjct: 497 KRPQSPSPRRETGKESRKSQSPSPKNESAR 526
>MIAA_STAAW (P65356) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>MIAA_STAAS (Q6G9R0) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>MIAA_STAAR (Q6GHD2) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>MIAA_STAAN (P65355) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>MIAA_STAAM (P65354) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>MIAA_STAAC (Q5HGC9) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 226 DHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 324 DH R Q+ +Q SC SM I Y++L+ V Sbjct: 222 DHGLFREVQQLVEQGYESCQSMQAIGYKELIPV 254
>LAP2_MOUSE (Q80TH2) LAP2 protein (Erbb2-interacting protein) (Erbin)| (Densin-180-like protein) Length = 1402 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = +1 Query: 298 ISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNE 456 IS + A EE+ K A D DE E R G L R+P PYP+E Sbjct: 439 ISDNESFNPALWEEQRKQRAQVAFECDEDKDEREAPPREGNLK-RYPTPYPDE 490 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,796,383 Number of Sequences: 219361 Number of extensions: 1442626 Number of successful extensions: 4792 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4611 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4786 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
