| Clone Name | bags21d04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 567 bits (286), Expect = e-158 Identities = 469/530 (88%) Strand = Plus / Plus Query: 25 cagtcttctggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgct 84 ||||| || |||||||||||||| || || || ||| |||||||||||| ||||| ||| Sbjct: 256 cagtcctcaggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgct 315 Query: 85 ggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggtacg 144 ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||| Sbjct: 316 ggactgagagcattggctcttcttggagttggtgcttctggtcttttaagctttgctaca 375 Query: 145 atagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcat 204 ||||| |||||||||||||| ||||||||||||||||| || || || |||||||| ||| Sbjct: 376 atagcttctgcagatgaagctgagcatggtttggcagcagctgaatatccctggccacat 435 Query: 205 gctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttaccag 264 |||||||| ||||||||||| || || ||||| || || ||||||||||||||||| Sbjct: 436 gctggcattcttagctcttatgaccatgcatctattcggcgtggacatcaagtttataca 495 Query: 265 caagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttggggtg 324 ||||||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| ||| Sbjct: 496 caagtgtgtgcctcttgccattccatgtcattaatttcgtaccgagatttggttggtgtg 555 Query: 325 gcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtcct 384 ||||| |||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 556 gcctacactgaagaagaaacaaaggctatggctgctgagattgaggtggttgatggtcct 615 Query: 385 aatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagcct 444 ||||||||||||||||||||||| |||||||| ||| | ||||| || ||||| || || Sbjct: 616 aatgatgagggtgaaatgttcacacgtcctggtaagttaagtgaccggttcccacaacca 675 Query: 445 tatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctcagc 504 ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 676 tatccaaatgagcaagcagcccgttttgcaaatggtggggcatacccaccagatctcagt 735 Query: 505 cttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttct 554 ||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 736 cttatcacgaaggcaaggcacaatggccagaactatgtgtttgctcttct 785
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 545 bits (275), Expect = e-152 Identities = 446/503 (88%) Strand = Plus / Plus Query: 52 tcatttcggggaaagcatgaagagtcctctgctggactgagagcattggctcttctcgga 111 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 200 tcatttcggggaaagcatgaagaatcctctgctggactgagagcattggctcttcttgga 259 Query: 112 gttggtgcttctggtcttttatgttttggtacgatagcatctgcagatgaagccgagcat 171 |||||||| ||||||||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 260 gttggtgcctctggtcttttgagtttttctacaatagcatctgctgatgaagctgagcat 319 Query: 172 ggtttggcagctgcagagtacccctggccgcatgctggcatccttagctcttacgatcac 231 || |||||||| |||| || |||||||| |||||||||||| | ||||| || |||||| Sbjct: 320 ggcttggcagccccagattatccctggccacatgctggcatcatgagctcgtatgatcac 379 Query: 232 gcatcaatccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatg 291 |||||||| || ||||| |||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 380 gcatcaattcggcgtgggcatcaagtttacacgcaagtttgtgcctcttgtcactccatg 439 Query: 292 tcattgatttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggca 351 || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 440 tccttgatttcataccgtgatttggttggcgtggcctatactgaagaggaaacaaaggca 499 Query: 352 atggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgt 411 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || Sbjct: 500 atggctgctgagattgaggtagttgatggtcctaatgatgagggtgaaatgttcacccgc 559 Query: 412 cctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagcccgattt 471 ||||| || ||||| ||||||||||| ||||||||| |||| |||||||||||||| ||| Sbjct: 560 cctggtaaactgagcgatcgcttcccacagccttatgcaaacgagcaagcagcccggttt 619 Query: 472 gcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggcacgatggc 531 || |||||||| ||||| || || || || || || ||||| |||||||||||| |||| Sbjct: 620 gctaatggtggtgcataccctccggaccttagtctcatcacaaaggcaaggcacaatggt 679 Query: 532 cagaactacgtgtttgctcttct 554 |||||||| || || |||||||| Sbjct: 680 cagaactatgttttcgctcttct 702
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 539 bits (272), Expect = e-150 Identities = 452/512 (88%) Strand = Plus / Plus Query: 43 ctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgagagcattggct 102 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 235 ctgctttcttcatttcggggaaatcatgaagagtcctctgctggattgagagcattggcg 294 Query: 103 cttctcggagttggtgcttctggtcttttatgttttggtacgatagcatctgcagatgaa 162 ||||| ||||||||||| || |||||||| |||||| ||| ||||||||||| |||||| Sbjct: 295 cttcttggagttggtgcctccggtcttttgagttttgctacaatagcatctgctgatgaa 354 Query: 163 gccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatccttagctct 222 || ||||||||||||||||| |||| || || ||||| |||||||||||| | |||||| Sbjct: 355 gctgagcatggtttggcagccccagattatccgtggccacatgctggcatcatgagctct 414 Query: 223 tacgatcacgcatcaatccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgt 282 || ||||| |||||||| ||||| || |||||||||||| ||||| ||||| |||||| Sbjct: 415 tatgatcatgcatcaattcgccgagggcatcaagtttacacacaagtttgtgcttcttgt 474 Query: 283 cactccatgtcattgatttcataccgtgatttggttggggtggcctatactgaagaggaa 342 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 475 cactccatgtccttgatttcataccgtgatttggttggggtggcctatactgaggaggaa 534 Query: 343 actaaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatg 402 || ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 535 acaaaggcaatggctgctgagattgaggtcgttgatggtcctaatgatgagggtgaaatg 594 Query: 403 ttcacgcgtcctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagca 462 ||||| || ||||| || || || |||||||| || ||||||||| |||||||||||||| Sbjct: 595 ttcacccgccctggtaaactcagcgatcgctttccacagccttatgcaaatgagcaagca 654 Query: 463 gcccgatttgcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaagg 522 ||||||||||| |||||||| || || || || || || || |||||||| ||||||||| Sbjct: 655 gcccgatttgctaatggtggcgcctacccgccggaccttagtcttatcacaaaggcaagg 714 Query: 523 cacgatggccagaactacgtgtttgctcttct 554 ||| |||| |||||||| || || |||||||| Sbjct: 715 cacaatggtcagaactatgttttcgctcttct 746
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 83 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 142 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 110 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 169 Query: 143 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 202 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 170 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 229 Query: 203 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 262 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 230 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 289 Query: 263 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 322 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 290 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 349 Query: 323 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 382 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 350 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 409 Query: 383 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 442 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 410 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 469 Query: 443 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 502 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 470 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 529 Query: 503 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttct 554 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| Sbjct: 530 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttct 581
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 83 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 142 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 334 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 393 Query: 143 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 202 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 394 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 453 Query: 203 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 262 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 454 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 513 Query: 263 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 322 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 514 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 573 Query: 323 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 382 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 574 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 633 Query: 383 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 442 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 634 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 693 Query: 443 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 502 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 694 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 753 Query: 503 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttct 554 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| Sbjct: 754 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttct 805
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 83 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 142 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 258 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 317 Query: 143 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 202 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 318 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 377 Query: 203 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 262 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 378 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 437 Query: 263 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 322 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 438 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 497 Query: 323 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 382 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 498 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 557 Query: 383 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 442 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 558 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 617 Query: 443 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 502 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 618 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 677 Query: 503 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttct 554 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| Sbjct: 678 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttct 729
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 305 bits (154), Expect = 8e-80 Identities = 244/274 (89%) Strand = Plus / Minus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 94714 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 94655 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 94654 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 94595 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 94594 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 94535 Query: 424 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 483 ||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 94534 agtgaccggttcccacaaccatatccaaatgagcaagcagcccgttttgcaaatggtggg 94475 Query: 484 gcatatcccccagatctcagccttatcacgaagg 517 ||||| || ||||||||||| ||||||||||||| Sbjct: 94474 gcatacccaccagatctcagtcttatcacgaagg 94441 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 34 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 93 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 95193 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 95134 Query: 94 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 153 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 95133 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 95074 Query: 154 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 213 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 95073 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 95014 Query: 214 cttagctctta 224 ||||||||||| Sbjct: 95013 cttagctctta 95003 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 515 aggcaaggcacgatggccagaactacgtgtttgctcttct 554 ||||||||||| ||||||||||||| |||||||||||||| Sbjct: 94358 aggcaaggcacaatggccagaactatgtgtttgctcttct 94319
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 305 bits (154), Expect = 8e-80 Identities = 244/274 (89%) Strand = Plus / Minus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 13411251 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 13411192 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 13411191 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 13411132 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 13411131 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 13411072 Query: 424 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 483 ||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13411071 agtgaccggttcccacaaccatatccaaatgagcaagcagcccgttttgcaaatggtggg 13411012 Query: 484 gcatatcccccagatctcagccttatcacgaagg 517 ||||| || ||||||||||| ||||||||||||| Sbjct: 13411011 gcatacccaccagatctcagtcttatcacgaagg 13410978 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 34 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 93 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 13411730 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 13411671 Query: 94 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 153 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 13411670 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 13411611 Query: 154 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 213 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 13411610 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 13411551 Query: 214 cttagctctta 224 ||||||||||| Sbjct: 13411550 cttagctctta 13411540 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 515 aggcaaggcacgatggccagaactacgtgtttgctcttct 554 ||||||||||| ||||||||||||| |||||||||||||| Sbjct: 13410895 aggcaaggcacaatggccagaactatgtgtttgctcttct 13410856
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 266 bits (134), Expect = 7e-68 Identities = 239/274 (87%) Strand = Plus / Plus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 41069204 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 41069263 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 41069264 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 41069323 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 41069324 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 41069383 Query: 424 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 483 || || || ||||| || || || |||||||||||||||| |||||| ||||||| ||| Sbjct: 41069384 agcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggg 41069443 Query: 484 gcatatcccccagatctcagccttatcacgaagg 517 ||||| ||||| |||||||| || ||||| |||| Sbjct: 41069444 gcataccccccggatctcagtctaatcacaaagg 41069477 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 83 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 142 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 41068724 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 41068783 Query: 143 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 202 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 41068784 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 41068843 Query: 203 atgctggcatccttagctcttacgatcacgcatc 236 ||||||||||||||||||| || ||||| ||||| Sbjct: 41068844 atgctggcatccttagctcatatgatcatgcatc 41068877 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 515 aggcaaggcacgatggccagaactacgtgtttgctcttct 554 |||| |||||| ||||||||||||| || ||||||||||| Sbjct: 41069564 aggccaggcacaatggccagaactatgtttttgctcttct 41069603
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 266 bits (134), Expect = 7e-68 Identities = 239/274 (87%) Strand = Plus / Plus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 106134 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 106193 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 106194 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 106253 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 106254 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 106313 Query: 424 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 483 || || || ||||| || || || |||||||||||||||| |||||| ||||||| ||| Sbjct: 106314 agcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggg 106373 Query: 484 gcatatcccccagatctcagccttatcacgaagg 517 ||||| ||||| |||||||| || ||||| |||| Sbjct: 106374 gcataccccccggatctcagtctaatcacaaagg 106407 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 83 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 142 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 105654 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 105713 Query: 143 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 202 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 105714 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 105773 Query: 203 atgctggcatccttagctcttacgatcacgcatc 236 ||||||||||||||||||| || ||||| ||||| Sbjct: 105774 atgctggcatccttagctcatatgatcatgcatc 105807 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 515 aggcaaggcacgatggccagaactacgtgtttgctcttct 554 |||| |||||| ||||||||||||| || ||||||||||| Sbjct: 106494 aggccaggcacaatggccagaactatgtttttgctcttct 106533
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 192 bits (97), Expect = 8e-46 Identities = 226/269 (84%) Strand = Plus / Plus Query: 250 catcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgt 309 ||||| |||||||||||||||||||| || || ||||| ||||| | ||||| |||||| Sbjct: 494 catcaggtttaccagcaagtgtgtgcgtcctgccactcaatgtcgctaatttcctaccgt 553 Query: 310 gatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaa 369 ||| | ||||| || || || |||||||| ||||||||||| ||||| || |||||||| Sbjct: 554 gatcttgttggtgttgcatacactgaagaagaaactaaggccatggcagcagaaattgag 613 Query: 370 gtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgat 429 ||||||||||| ||||||||||||||||| |||||||| || ||||| ||| |||||||| Sbjct: 614 gtggttgatggccctaatgatgagggtgagatgttcacccgccctgggaagttgagtgat 673 Query: 430 cgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggggcatat 489 || || || |||||||| |||||||| ||| || | ||||||||||||||||| ||| Sbjct: 674 cgttttccacagccttacccaaatgaagcagctgcaaggtttgcaaatggtggggcttat 733 Query: 490 cccccagatctcagccttatcacgaaggc 518 || || ||||| || |||||||| ||||| Sbjct: 734 cctcctgatctaagtcttatcactaaggc 762
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 159 bits (80), Expect = 1e-35 Identities = 215/260 (82%) Strand = Plus / Plus Query: 196 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 255 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 93 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 152 Query: 256 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 315 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 153 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 212 Query: 316 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 375 || |||||||| ||||| || |||||| ||||| ||||| ||||| ||||| |||| Sbjct: 213 gtcggggtggcatatacagaggaggaagtaaaggctatggcagctgagattgaggtggag 272 Query: 376 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 435 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 273 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 332 Query: 436 ccgcagccttatccaaatga 455 || ||||| ||||||||||| Sbjct: 333 cctcagccatatccaaatga 352
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Plus Query: 196 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 255 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 390 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 449 Query: 256 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 315 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 450 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 509 Query: 316 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 375 || |||||||| ||||| || || ||| ||||| ||||| ||||| ||||| |||| Sbjct: 510 gtcggggtggcatatacagaggaagaagtaaaggctatggcagctgagattgaggtggcg 569 Query: 376 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 435 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 570 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 629 Query: 436 ccgcagccttatccaaatga 455 || ||||| ||||||||||| Sbjct: 630 cctcagccatatccaaatga 649
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 141 bits (71), Expect = 3e-30 Identities = 269/335 (80%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 334 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 393 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 394 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 453 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 454 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 513 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 514 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 573 Query: 425 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 484 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 574 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 633 Query: 485 catatcccccagatctcagccttatcacgaaggca 519 | ||||| || ||||| || |||||||| |||||| Sbjct: 634 cgtatcctcctgatctaagtcttatcactaaggca 668
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 137 bits (69), Expect = 4e-29 Identities = 210/257 (81%) Strand = Plus / Plus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||| ||||||||||| |||||| ||||| || || || |||||||| ||||| ||| Sbjct: 77041 cgtggtcatcaagtttatacgcaagtctgtgcttcctgccattccatgtctttgatatca 77100 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||||||||||||||| || || || || |||| ||| |||||||||||| |||| Sbjct: 77101 taccgtgatttggttggtgttgcttacacagaagcggaggtaaaggcaatggctactgag 77160 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 ||||| ||||||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77161 attgaggtggttgatggccctaatgatgagggtgagatgtttacacgacccggcaaactc 77220 Query: 424 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 483 ||||||||||| || ||||| ||| ||||||| ||| || ||||||| ||||| || Sbjct: 77221 agtgatcgctttcctcagccatattcaaatgaatcagctgctagatttgctaatggagga 77280 Query: 484 gcatatcccccagatct 500 || ||||| |||||||| Sbjct: 77281 gcctatcctccagatct 77297 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 105587 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 105646 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 105647 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 105706 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 105707 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 105766 Query: 424 agtgatcgcttcccgcagccttatccaaatga 455 ||||||||||| || ||||| ||| ||||||| Sbjct: 105767 agtgatcgctttcctcagccatatgcaaatga 105798 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 527 atggccagaactacgtgtttgctcttct 554 |||| ||||||||||||||||||||||| Sbjct: 77401 atggtcagaactacgtgtttgctcttct 77428
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 256 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 315 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 4150 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 4209 Query: 316 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 375 |||||||| || ||||| || || || || ||||| ||||| || |||||||| |||||| Sbjct: 4210 gttggggttgcgtataccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 4269 Query: 376 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 435 ||||| ||||||||||| ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 4270 gatgggcctaatgatgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 4329 Query: 436 ccgcagccttatccaaatga 455 || ||||||||| ||||||| Sbjct: 4330 cctcagccttatgcaaatga 4349
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 425 gtgatcgcttcccgcagccttatccaaatga 455 |||| || || || ||||| ||| ||||||| Sbjct: 596 gtgaccggtttcctcagccatatgcaaatga 626
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 322 cagagtacccgtggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 381 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 382 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 441 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 442 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 501 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 502 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 561 Query: 425 gtgatcgcttcccgcagccttatccaaatga 455 |||| || || || ||||| ||| ||||||| Sbjct: 562 gtgaccggtttcctcagccatatgcaaatga 592
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 133 bits (67), Expect = 7e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 423 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 543 Query: 425 gtgatcgcttcccgcagccttatccaaatga 455 |||| || || || ||||| ||| ||||||| Sbjct: 544 gtgaccggtttcctcagccatatgcaaatga 574
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 127 bits (64), Expect = 4e-26 Identities = 166/200 (83%) Strand = Plus / Plus Query: 256 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 315 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 443 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 502 Query: 316 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 375 |||||||| ||||| || || || || || ||||| ||||| || |||||||| |||||| Sbjct: 503 gttggggttgcctacaccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 562 Query: 376 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 435 ||||| |||||||| || ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 563 gatgggcctaatgacgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 622 Query: 436 ccgcagccttatccaaatga 455 || ||||||||| ||||||| Sbjct: 623 cctcagccttatgcaaatga 642
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 125 bits (63), Expect = 2e-25 Identities = 219/271 (80%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 221 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 280 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 281 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 340 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 341 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 400 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 401 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 460 Query: 425 gtgatcgcttcccgcagccttatccaaatga 455 |||| || || || ||||| ||| ||||||| Sbjct: 461 gtgaccggtttcctcagccatatgcaaatga 491
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 125 bits (63), Expect = 2e-25 Identities = 219/271 (80%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 424 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 425 gtgatcgcttcccgcagccttatccaaatga 455 |||| || || || ||||| ||| ||||||| Sbjct: 596 gtgaccggtttcctcagccatatgcaaatga 626
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 244 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 303 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 9195 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 9254 Query: 304 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 363 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 9255 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 9314 Query: 364 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 9315 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 9374 Query: 424 agtgatcgcttcccgcagccttatccaaatga 455 ||||||||||| || ||||| ||| ||||||| Sbjct: 9375 agtgatcgctttcctcagccatatgcaaatga 9406
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 119 bits (60), Expect = 1e-23 Identities = 220/272 (80%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 279 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 338 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 339 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 398 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 399 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 458 Query: 365 ttgaagt-ggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 423 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 459 tcgaggtaagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactc 518 Query: 424 agtgatcgcttcccgcagccttatccaaatga 455 ||||| || || || ||||| ||| ||||||| Sbjct: 519 agtgaccggtttcctcagccatatgcaaatga 550
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 117 bits (59), Expect = 4e-23 Identities = 182/223 (81%) Strand = Plus / Plus Query: 185 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 244 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 245 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 304 |||| ||||||||||| |||||||| ||| |||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgttcatcatgccattcaatgtctctgatctcat 423 Query: 305 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 364 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 365 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcac 407 | || || || ||||| ||||||||||||||||| |||||||| Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcac 526
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 115 bits (58), Expect = 2e-22 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 346 aaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttc 405 ||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 16 aaggccatggctgctgaaattgaggtggt-gatggtcctaatgatgaaggtgagatgttc 74 Query: 406 acg-cgtcctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagc 464 || |||||||| || | || ||||| ||||| ||||| ||| |||| || ||||| || Sbjct: 75 actacgtcctggtaaattaagcgatcgtttccctcagccatatgcaaacgaacaagctgc 134 Query: 465 ccgatttgcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggca 524 | |||||||||||||| |||||||| ||||| || ||||| || || ||||| | || Sbjct: 135 aaggtttgcaaatggtggagcatatcctccagacctaagcctaataactaaggctcgaca 194 Query: 525 cgatggccagaactacgtgtttgctcttct 554 | |||| |||||||| || ||||||||||| Sbjct: 195 caatggacagaactatgtatttgctcttct 224
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Minus Query: 238 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 297 ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || Sbjct: 21228 atccgtcgtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctg 21169 Query: 298 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 357 || |||||||| || ||||| || || ||||| || || || || | ||||||||||| Sbjct: 21168 atctcataccgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggca 21109 Query: 358 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 417 |||||||| || || || ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 21108 gctgaaatcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggt 21049 Query: 418 aagctgagtgatcgcttcccgcagccttatccaaatga 455 || || ||||| || || || ||||| ||| ||||||| Sbjct: 21048 aaactcagtgaccggtttcctcagccatatgcaaatga 21011
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 107 bits (54), Expect = 4e-20 Identities = 212/262 (80%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 295 ttgatttcataccgtgatttggttggg-gtggcctatactgaagaggaaactaaggcaat 353 ||||| |||||||||||||||||||| || || ||||| ||||| ||| ||||| || Sbjct: 23 ttgatatcataccgtgatttggttggctgttgcttatacagaagatgaagtaaaggccat 82 Query: 354 gg-ctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtc 412 || | ||||| ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 83 ggacagctgagattgaggtggttgacggtcctaatgatgagggtgaaatgttcactcgcc 142 Query: 413 ctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttg 472 | || || || ||||||||||| || ||||| ||| ||||||| ||| || | |||| Sbjct: 143 ccggtaaactcagtgatcgctttcctcagccatatgcaaatgaagcagctgctaggtttg 202 Query: 473 caaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggcacgatggcc 532 | ||||| || || ||||| |||||||| || ||||| || ||||| | ||| |||| | Sbjct: 203 ctaatggaggagcctatcctccagatctaagtcttattaccaaggcccgtcacaatggtc 262 Query: 533 agaactacgtgtttgctcttct 554 |||| || |||||||| ||||| Sbjct: 263 agaattatgtgtttgcccttct 284
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 238 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 297 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 298 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 357 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 358 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 417 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 418 aagctgagtgatcg 431 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 238 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 297 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 298 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 357 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 358 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 417 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 418 aagctgagtgatcg 431 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 238 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 297 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 15356 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 15415 Query: 298 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 357 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 15416 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 15475 Query: 358 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 417 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 15476 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 15535 Query: 418 aagctgagtgatcg 431 || || |||||||| Sbjct: 15536 aaactcagtgatcg 15549
>gb|DQ228959.1| Toxoplasma gondii mitochondrial cytochrome c1 protein (Cytc1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1191 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 379 ggtcctaatgatgagggtgaaatgttcacgcgtcctgg 416 ||||| |||||| |||| ||||||| |||||||||||| Sbjct: 676 ggtccaaatgatcagggcgaaatgtacacgcgtcctgg 713
>gb|AC125318.4| Mus musculus BAC clone RP24-301F13 from chromosome 8, complete sequence Length = 152405 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 aacttttcagagccagtcttct 33 |||||||||||||||||||||| Sbjct: 73898 aacttttcagagccagtcttct 73919
>gb|AC130837.4| Mus musculus BAC clone RP24-157P23 from chromosome 8, complete sequence Length = 155270 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 aacttttcagagccagtcttct 33 |||||||||||||||||||||| Sbjct: 15606 aacttttcagagccagtcttct 15627
>gb|AC019201.6| Homo sapiens BAC clone RP11-383I5 from 2, complete sequence Length = 168011 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 336 agaggaaactaaggcaatggctgctg 361 ||||||||| |||||||||||||||| Sbjct: 158675 agaggaaaccaaggcaatggctgctg 158700
>gb|AC151975.1| Mus musculus BAC clone RP24-423F11 from 8, complete sequence Length = 198686 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 aacttttcagagccagtcttct 33 |||||||||||||||||||||| Sbjct: 164544 aacttttcagagccagtcttct 164565
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 tgcttctggtcttttatgtttt 138 |||||||||||||||||||||| Sbjct: 137042 tgcttctggtcttttatgtttt 137063
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 gatggtcctaatgatgagggtgaaatgtt 404 |||||||| |||||||| ||||||||||| Sbjct: 331697 gatggtccaaatgatgacggtgaaatgtt 331725
>gb|AC133796.2| Homo sapiens 3 BAC RP11-10I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125170 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 tactgaagaggaaactaaggc 350 ||||||||||||||||||||| Sbjct: 23879 tactgaagaggaaactaaggc 23899
>emb|AJ235271.1|RPXX02 Rickettsia prowazekii strain Madrid E, complete genome; segment 2/4 Length = 312430 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 gatggtcctaatgatgagggtgaaatgtt 404 |||||||| |||||||| ||||||||||| Sbjct: 50796 gatggtccaaatgatgatggtgaaatgtt 50824
>gb|AC165069.2| Phakopsora pachyrhizi clone JGIAFNA-645A6, complete sequence Length = 40445 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 atgatgagggtgaaatgttca 406 ||||||||||||||||||||| Sbjct: 1063 atgatgagggtgaaatgttca 1083
>ref|XM_629511.1| Dictyostelium discoideum hypothetical protein (DDB0184465), partial mRNA Length = 828 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 226 gatcacgcatcaatccgccgtggacatcaagtttac 261 ||||||||| |||| || ||||| |||||||||||| Sbjct: 172 gatcacgcagcaattcgtcgtggtcatcaagtttac 207
>ref|XM_741478.1| Aspergillus fumigatus Af293 DNA repair protein Rhp26 (Afu4g03840) partial mRNA Length = 3645 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gctgaaattgaagtggttga 377 |||||||||||||||||||| Sbjct: 37 gctgaaattgaagtggttga 56
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gtcctggcaagctgagtgat 429 |||||||||||||||||||| Sbjct: 8614 gtcctggcaagctgagtgat 8633
>emb|AL773524.13| Human DNA sequence from clone RP11-250H24 on chromosome 9 Contains a calponin 2 (CNN2) pseudogene and a novel pseudogene, complete sequence Length = 125622 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 taatgatgagggtgaaatgt 403 |||||||||||||||||||| Sbjct: 104070 taatgatgagggtgaaatgt 104089
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gccttatccaaatgagcaagcagc 464 |||||||||||||||||| ||||| Sbjct: 915923 gccttatccaaatgagcaggcagc 915946
>gb|BC054574.1| Danio rerio aminolevulinate, delta-, synthetase 1, mRNA (cDNA clone MGC:63935 IMAGE:6791081), complete cds Length = 2186 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tcttctggctcatctctgct 47 |||||||||||||||||||| Sbjct: 432 tcttctggctcatctctgct 413
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ctcatctctgctttcttcat 55 |||||||||||||||||||| Sbjct: 59026 ctcatctctgctttcttcat 59007
>gb|AC093742.3| Homo sapiens BAC clone RP11-24M8 from 4, complete sequence Length = 114455 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 actccatgtcattgatttca 303 |||||||||||||||||||| Sbjct: 112262 actccatgtcattgatttca 112281
>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence Length = 186076 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tccatgtcattgatttcata 305 |||||||||||||||||||| Sbjct: 113972 tccatgtcattgatttcata 113991
>emb|AL731780.6| Mouse DNA sequence from clone RP23-365D10 on chromosome 4, complete sequence Length = 78870 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tctgaagaaaacttttcaga 22 |||||||||||||||||||| Sbjct: 35183 tctgaagaaaacttttcaga 35164
>gb|AY107216.1| Zea mays PCO114058 mRNA sequence Length = 1442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tggtcctaatgatgagggtg 397 |||||||||||||||||||| Sbjct: 104 tggtcctaatgatgagggtg 123
>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence Length = 173710 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtcctggcaagctgagtgat 429 |||||||||||||||||||| Sbjct: 8815 gtcctggcaagctgagtgat 8796
>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592, complete sequence Length = 96561 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gaagaggaaactaaggcaat 353 |||||||||||||||||||| Sbjct: 91895 gaagaggaaactaaggcaat 91876
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gaagaggaaactaaggcaat 353 |||||||||||||||||||| Sbjct: 52406 gaagaggaaactaaggcaat 52387
>dbj|AP006649.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320b, complete sequence Length = 32128 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gaagaggaaactaaggcaat 353 |||||||||||||||||||| Sbjct: 3937 gaagaggaaactaaggcaat 3956
>ref|NM_201287.1| Danio rerio aminolevulinate, delta-, synthetase 1 (alas1), mRNA Length = 2186 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tcttctggctcatctctgct 47 |||||||||||||||||||| Sbjct: 432 tcttctggctcatctctgct 413 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,983,746 Number of Sequences: 3902068 Number of extensions: 4983746 Number of successful extensions: 94538 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94373 Number of HSP's gapped (non-prelim): 145 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)