ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21c14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 1162 bits (586), Expect = 0.0 Identities = 602/606 (99%), Gaps = 1/606 (0%) Strand = Plus / Plus Query: 13 aggaagagcccgccgtggccgtggccgaggnaggagtttgacgtggcggccgaggaggag 72 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 417 aggaagagcccgccgtggccgtggccgagg-aggagtttgacgtggcggccgaggaggag 475 Query: 73 gtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctgccctac 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctgccctac 535 Query: 133 gacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctcc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 gacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctcc 595 Query: 193 gaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagt 252 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 gaggtcatttacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagt 655 Query: 253 accattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtgaatgggagg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 accattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtgaatgggagg 715 Query: 313 ctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctccccgtgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctccccgtgat 775 Query: 373 tccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacgactctagg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacgactctagg 835 Query: 433 ttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacaga 492 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 836 ttggtggagctgttcagcgagcatggcaaagtggtcgatgccaaggtcgtctacgacaga 895 Query: 493 gacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggaggaactggat 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 gacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggaggaactggat 955 Query: 553 gacgccatcgctgccctcgatggacagagcttggaggggcgtgccctaagggtcaacgtc 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 gacgccatcgctgccctcgatggacagagcttggaggggcgtgccctaagggtcaacgtc 1015 Query: 613 gcggag 618 |||||| Sbjct: 1016 gcggag 1021
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 842 bits (425), Expect = 0.0 Identities = 521/553 (94%) Strand = Plus / Plus Query: 66 ggaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacct 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 ggaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacct 403 Query: 126 gccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcga 185 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gccctacgacgtggacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcga 463 Query: 186 ggtctccgaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcac 245 ||||||||||||||| || ||| | ||||| ||||||||||||||||| ||||||||||| Sbjct: 464 ggtctccgaggtcatttataacagggaaacagaccagagccgtggatttgggtttgtcac 523 Query: 246 catgagtaccattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtgaa 305 |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 524 catgagtaccattgaggaggctgagaaggccgtggagatgttccatcgctatgacgtgaa 583 Query: 306 tgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctcc 365 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 cgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctcc 643 Query: 366 ccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacga 425 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 644 ccgtgattccgggtcttcattcaggatctacgtgggcaacctgccatggcaagtggacga 703 Query: 426 ctctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtcta 485 |||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 704 ctctaggttggtagagctgttcagcgagcacggcaaagttgtcgatgccagggttgtcta 763 Query: 486 cgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagga 545 |||||||||||||||||||||||| || || ||||||||||||||||| || ||| ||| Sbjct: 764 cgacagagacactgggcgctcacggggatttggtttcgtgacaatggcatcacagccgga 823 Query: 546 actggatgacgccatcgctgccctcgatggacagagcttggaggggcgtgccctaagggt 605 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 824 acttgatgatgccatcgctgccctcgatggacagagcttggaggggcgtgctctgcgggt 883 Query: 606 caacgtcgcggag 618 ||||| |||||| Sbjct: 884 gaacgttgcggag 896
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 559 bits (282), Expect = e-156 Identities = 468/530 (88%) Strand = Plus / Plus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 417 gaggaggtcggcgagtacgtggagccgcccgaggaggccaaggtctacgtcgggaaccta 476 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 477 ccctacgacatcgacagcgagcgcctcgcccagctcttcgaacaggccggcatcgtcgag 536 Query: 187 gtctccgaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcacc 246 ||||||||||||||||||||| ||||||| || | ||| |||||||| || ||||||||| Sbjct: 537 gtctccgaggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcacc 596 Query: 247 atgagtaccattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtgaat 306 ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 597 atgagcaccgttgaggaggctgagaaggctgtggagatgttccatcgctacgatgttgat 656 Query: 307 gggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctccc 366 |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 657 gggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccc 716 Query: 367 cgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacgac 426 ||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| ||| Sbjct: 717 cgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgac 776 Query: 427 tctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctac 486 ||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || || Sbjct: 777 tctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtat 836 Query: 487 gacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggaggaa 546 |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| ||| Sbjct: 837 gacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaagaa 896 Query: 547 ctggatgacgccatcgctgccctcgatggacagagcttggaggggcgtgc 596 |||| ||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 897 ttggacgacgctattgcagccctcgatggacagagtttggatggccgtgc 946
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 559 bits (282), Expect = e-156 Identities = 468/530 (88%) Strand = Plus / Plus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 418 gaggaggtcggcgagtacgtggagccgcccgaggaggccaaggtctacgtcgggaaccta 477 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 478 ccctacgacatcgacagcgagcgcctcgcccagctcttcgaacaggccggcatcgtcgag 537 Query: 187 gtctccgaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcacc 246 ||||||||||||||||||||| ||||||| || | ||| |||||||| || ||||||||| Sbjct: 538 gtctccgaggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcacc 597 Query: 247 atgagtaccattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtgaat 306 ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 598 atgagcaccgttgaggaggctgagaaggctgtggagatgttccatcgctacgatgttgat 657 Query: 307 gggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctccc 366 |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 658 gggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccc 717 Query: 367 cgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacgac 426 ||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| ||| Sbjct: 718 cgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgac 777 Query: 427 tctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctac 486 ||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || || Sbjct: 778 tctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtat 837 Query: 487 gacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggaggaa 546 |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| ||| Sbjct: 838 gacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaagaa 897 Query: 547 ctggatgacgccatcgctgccctcgatggacagagcttggaggggcgtgc 596 |||| ||||| || || ||||||||||||||||| ||||| || ||||| Sbjct: 898 ttggacgacgctattgcagccctcgatggacagagtttggatggccgtgc 947
>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781 Length = 350 Score = 502 bits (253), Expect = e-139 Identities = 266/269 (98%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 350 gggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgc 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 gggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgc 289 Query: 410 catggcaagtggacgactctaggttggtggagctgttcagtgagcatggcaaagtggtcg 469 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 288 catggcaagtggacgactctaggttggtggagctgttcagcgagcatggcaaagtggtcg 229 Query: 470 atgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggtttcgtgacaa 529 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 228 atgccagggtcgtctacgacagagacactgggcgcccacgaggcttcggtttcgtgacaa 169 Query: 530 tggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacagagcttggagg 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 168 tggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacagagcttgga-g 110 Query: 590 ggcgtgccctaagggtcaacgtcgcggag 618 ||||||||||||||||||||||||||||| Sbjct: 109 ggcgtgccctaagggtcaacgtcgcggag 81
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 464 bits (234), Expect = e-127 Identities = 459/534 (85%) Strand = Plus / Plus Query: 64 gaggaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaac 123 ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 457 gaggaggaggtcggggagtacgttgagccgcccgaggaggccaaggtctacgtcggaaac 516 Query: 124 ctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtc 183 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 517 ctgccctacgacgtcgacagcgagcgcctcgctcagctcttcgaccaggccggcgtcgtc 576 Query: 184 gaggtctccgaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtc 243 |||||| | |||||||| |||||| ||||||| || || || ||||| || ||||||||| Sbjct: 577 gaggtcgcagaggtcatttacaacagagaaacagatcaaagtcgtgggtttgggtttgtc 636 Query: 244 accatgagtaccattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtg 303 || ||||| || |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 637 actatgagcactgttgaggaggctgagaaggctgtggagatgttccatcgctatgatgtc 696 Query: 304 aatgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcct 363 ||||| ||||| |||||||||| || ||||||||||||||| | || ||||| || ||| Sbjct: 697 aatggaaggcttctgactgtaaataaagcagctcctagaggctctcgtgtggacagacct 756 Query: 364 ccccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggac 423 ||| | | || ||| |||| |||| || ||||| ||||||||||| ||||||||||| Sbjct: 757 cccagacaatctgggccttctctcagaatttatgttggcaacctgccttggcaagtggat 816 Query: 424 gactctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtc 483 || ||||| ||||||||| ||||||| |||||||| ||||| || |||||||| || ||| Sbjct: 817 gattctagattggtggagttgttcagcgagcatggtaaagtagttgatgccagagttgtc 876 Query: 484 tacgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggag 543 || ||| |||| |||||||| ||||| || || ||||| || || ||||| |||||||| Sbjct: 877 tatgaccgagaaactgggcgttcacggggatttggttttgttactatggcatcgcaggac 936 Query: 544 gaactggatgacgccatcgctgccctcgatggacagagcttggaggggcgtgcc 597 ||| ||||||| || || |||||||| ||||||||||| ||||| || |||||| Sbjct: 937 gaattggatgatgctattgctgcccttgatggacagagtttggatggccgtgcc 990
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 440 bits (222), Expect = e-120 Identities = 444/518 (85%) Strand = Plus / Minus Query: 64 gaggaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaac 123 ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 761 gaggaggaggtcggggagtacgttgagccgcccgaggaggccaaggtctacgtcggaaac 702 Query: 124 ctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtc 183 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 701 ctgccctacgacgtcgacagcgagcgcctcgctcagctcttcgaccaggccggcgtcgtc 642 Query: 184 gaggtctccgaggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtc 243 |||||| | |||||||| |||||| ||||||| || || || ||||| || ||||||||| Sbjct: 641 gaggtcgcagaggtcatttacaacagagaaacagatcaaagtcgtgggtttgggtttgtc 582 Query: 244 accatgagtaccattgaggaggctgagaaggctgtagagatgttccatcgctacgatgtg 303 || ||||| || |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 581 actatgagcactgttgaggaggctgagaaggctgtggagatgttccatcgctatgatgtc 522 Query: 304 aatgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcct 363 ||||| ||||| |||||||||| || ||||||||||||||| | || ||||| || ||| Sbjct: 521 aatggaaggcttctgactgtaaataaagcagctcctagaggctctcgtgtggacagacct 462 Query: 364 ccccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggac 423 ||| | | || ||| |||| |||| || ||||| ||||||||||| ||||||||||| Sbjct: 461 cccagacaatctgggccttctctcagaatttatgttggcaacctgccttggcaagtggat 402 Query: 424 gactctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtc 483 || ||||| ||||||| | ||||||| |||||||| ||||| || |||||||| || ||| Sbjct: 401 gattctagattggtggggttgttcagcgagcatggtaaagtagttgatgccagagttgtc 342 Query: 484 tacgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggag 543 || ||| |||| |||||| | ||||| || || ||||| || || ||||| |||||||| Sbjct: 341 tatgacggagaaactgggggttcacggggatttggttttgttactatggcatcgcaggac 282 Query: 544 gaactggatgacgccatcgctgccctcgatggacagag 581 ||| ||||||| || || |||||||| ||||||||||| Sbjct: 281 gaattggatgatgctattgctgcccttgatggacagag 244
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 418 bits (211), Expect = e-114 Identities = 439/515 (85%) Strand = Plus / Plus Query: 83 acgtggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgaca 142 |||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 476 acgttgagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgaca 535 Query: 143 gcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatct 202 ||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||| | Sbjct: 536 gcgagcgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcattt 595 Query: 203 acaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgagg 262 ||||| ||||||| || || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 596 acaacagagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgagg 655 Query: 263 aggctgagaaggctgtagagatgttccatcgctacgatgtgaatgggaggctgttgactg 322 |||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 656 aggctgagaaggctgtggagatgttccatcgctatgatgtcaatggaaggcttctgactg 715 Query: 323 taaacaaggcagctcctagaggcgcccgggtggaaaggcctccccgtgattccgggtctt 382 |||| || ||||||||||||||| | || ||||| || |||||| | | || ||| ||| Sbjct: 716 taaataaagcagctcctagaggctctcgtgtggacagacctcccagacaatctgggcctt 775 Query: 383 cattcaggatctatgtgggcaacctgccatggcaagtggacgactctaggttggtggagc 442 | |||| || ||||| ||||||||||| ||||||||||| || ||||| ||||||||| Sbjct: 776 ctctcagaatttatgttggcaacctgccttggcaagtggatgattctagattggtggagt 835 Query: 443 tgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacagagacactgggc 502 ||||||| |||||||| ||||| || |||||||| || ||||| ||| |||| ||||||| Sbjct: 836 tgttcagcgagcatggtaaagtagttgatgccagagttgtctatgaccgagaaactgggc 895 Query: 503 gctcacgaggcttcggtttcgtgacaatggcgtcgcaggaggaactggatgacgccatcg 562 | || || || || ||||| || || ||||| |||||||| ||| ||||||| || || | Sbjct: 896 gttcgcggggatttggttttgttactatggcatcgcaggacgaattggatgatgctattg 955 Query: 563 ctgccctcgatggacagagcttggaggggcgtgcc 597 ||||||| ||||||||||| ||||| || |||||| Sbjct: 956 ctgcccttgatggacagagtttggatggccgtgcc 990
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 244 bits (123), Expect = 3e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 305 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 364 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 22204479 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 22204420 Query: 365 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 424 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 22204419 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 22204360 Query: 425 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 484 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 22204359 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 22204300 Query: 485 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 544 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 22204299 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 22204240 Query: 545 aactggatgacgccatcgctgccctcgatggacag 579 || |||| ||||| || || ||||||||||||||| Sbjct: 22204239 aattggacgacgctattgcagccctcgatggacag 22204205 Score = 188 bits (95), Expect = 1e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 22205715 gaggaggtcggcgagtacgtggagccgcccgaggaggccaaggtctacgtcgggaaccta 22205656 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 22205655 ccctacgacatcgacagcgagcgcctcgcccagctcttcgaacaggccggcatcgtcgag 22205596 Query: 187 gtctccgaggt 197 ||||||||||| Sbjct: 22205595 gtctccgaggt 22205585 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Minus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||| | ||||||||||||||||| | |||||||||||| |||||||| ||||| Sbjct: 570786 gaggaggtcagcgagtacgtggagccgcctgcggaggccaaggtatacgtcgggaaccta 570727 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 |||||| || ||||||||||||||||||| || |||||||| |||| |||||||||||| Sbjct: 570726 ccctacaacatcgacagcgagcgcctcgcccaactcttcgaacaggaaggcgtcgtcgag 570667 Query: 187 gtctccgaggt 197 ||||||||||| Sbjct: 570666 gtctccgaggt 570656 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 194 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 253 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 22205108 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 22205049 Query: 254 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 298 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22205048 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 22205004
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 244 bits (123), Expect = 3e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 305 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 364 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 24377 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 24318 Query: 365 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 424 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 24317 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 24258 Query: 425 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 484 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 24257 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 24198 Query: 485 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 544 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 24197 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 24138 Query: 545 aactggatgacgccatcgctgccctcgatggacag 579 || |||| ||||| || || ||||||||||||||| Sbjct: 24137 aattggacgacgctattgcagccctcgatggacag 24103 Score = 188 bits (95), Expect = 1e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 25613 gaggaggtcggcgagtacgtggagccgcccgaggaggccaaggtctacgtcgggaaccta 25554 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 25553 ccctacgacatcgacagcgagcgcctcgcccagctcttcgaacaggccggcatcgtcgag 25494 Query: 187 gtctccgaggt 197 ||||||||||| Sbjct: 25493 gtctccgaggt 25483 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 194 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 253 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 25006 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 24947 Query: 254 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 298 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24946 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 24902
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 244 bits (123), Expect = 3e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 305 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 364 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 125972 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 125913 Query: 365 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 424 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 125912 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 125853 Query: 425 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 484 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 125852 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 125793 Query: 485 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 544 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 125792 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 125733 Query: 545 aactggatgacgccatcgctgccctcgatggacag 579 || |||| ||||| || || ||||||||||||||| Sbjct: 125732 aattggacgacgctattgcagccctcgatggacag 125698 Score = 188 bits (95), Expect = 1e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 127208 gaggaggtcggcgagtacgtggagccgcccgaggaggccaaggtctacgtcgggaaccta 127149 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 127148 ccctacgacatcgacagcgagcgcctcgcccagctcttcgaacaggccggcatcgtcgag 127089 Query: 187 gtctccgaggt 197 ||||||||||| Sbjct: 127088 gtctccgaggt 127078 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 194 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 253 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 126601 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 126542 Query: 254 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 298 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 126541 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 126497
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 216 bits (109), Expect = 7e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 433 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 492 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaa 206 | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 493 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaa 552 Query: 207 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgagga 263 | |||| || | |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 553 cagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgagga 609 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 740 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 799 Query: 454 catgg 458 ||||| Sbjct: 800 catgg 804
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 216 bits (109), Expect = 7e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 427 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 486 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaa 206 | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 487 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaa 546 Query: 207 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgagga 263 | |||| || | |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 547 cagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgagga 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 793 Query: 454 catgg 458 ||||| Sbjct: 794 catgg 798
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 216 bits (109), Expect = 7e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 430 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 489 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaa 206 | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 490 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaa 549 Query: 207 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgagga 263 | |||| || | |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 550 cagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgagga 606 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 737 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 796 Query: 454 catgg 458 ||||| Sbjct: 797 catgg 801
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 216 bits (109), Expect = 7e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 427 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 486 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaa 206 | ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 487 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaa 546 Query: 207 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgagga 263 | |||| || | |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 547 cagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgagga 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 793 Query: 454 catgg 458 ||||| Sbjct: 794 catgg 798
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 202 bits (102), Expect = 1e-48 Identities = 120/126 (95%) Strand = Plus / Plus Query: 64 gaggaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaac 123 ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 670 gaggaggaggtcggggagtacgttgagccgcccgaggaggccaaggtctacgtcggaaac 729 Query: 124 ctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtc 183 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 730 ctgccctacgacgtcgacagcgagcgcctcgctcagctcttcgaccaggccggcgtcgtc 789 Query: 184 gaggtc 189 |||||| Sbjct: 790 gaggtc 795 Score = 155 bits (78), Expect = 2e-34 Identities = 231/282 (81%) Strand = Plus / Plus Query: 298 gatgtgaatgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaa 357 ||||| ||||| ||||| |||||||||| || ||||||||||||||| | || ||||| Sbjct: 2180 gatgtcaatggaaggcttctgactgtaaataaagcagctcctagaggctctcgtgtggac 2239 Query: 358 aggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaa 417 || |||||| | | || ||| |||| |||| || ||||| ||||||||||| |||||| Sbjct: 2240 agacctcccagacaatctgggccttctctcagaatttatgttggcaacctgccttggcaa 2299 Query: 418 gtggacgactctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagg 477 ||||| || ||||| ||||||||| ||||||| |||||||| ||||| || |||||||| Sbjct: 2300 gtggatgattctagattggtggagttgttcagcgagcatggtaaagtagttgatgccaga 2359 Query: 478 gtcgtctacgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcg 537 || ||||| ||| |||| |||||||| || || || || ||||| || || ||||| ||| Sbjct: 2360 gttgtctatgaccgagaaactgggcgttcgcggggatttggttttgttactatggcatcg 2419 Query: 538 caggaggaactggatgacgccatcgctgccctcgatggacag 579 ||||| ||| ||||||| || || |||||||| ||||||||| Sbjct: 2420 caggacgaattggatgatgctattgctgcccttgatggacag 2461 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 202 tacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgag 261 |||||| ||||||| || || || ||||| || ||||||||||| ||||| || ||||| Sbjct: 1202 tacaacagagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgag 1261 Query: 262 gaggctgagaaggctgtagagatgttccatcgc 294 ||||||||||||||||| ||||||||||||||| Sbjct: 1262 gaggctgagaaggctgtggagatgttccatcgc 1294
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 103 gccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctc 162 ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 163 ttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgaccag 222 ||||||||||||||||||||||||||| |||||||||| |||||| |||| || | ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 223 agccgtggattcgggtttgtcaccatgagtaccattgagga 263 ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgagga 228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 359 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 418 Query: 454 catgg 458 ||||| Sbjct: 419 catgg 423
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 103 gccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctc 162 ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 163 ttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgaccag 222 ||||||||||||||||||||||||||| |||||||||| |||||| |||| || | ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 223 agccgtggattcgggtttgtcaccatgagtaccattgagga 263 ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgagga 228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 359 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 418 Query: 454 catgg 458 ||||| Sbjct: 419 catgg 423
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagc 144 ||||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||| Sbjct: 54 gtggagccgccagaggaggccaaggtctacgttgggaaccttccctacgacgtcgacagc 113 Query: 145 gagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctac 204 ||| | ||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 114 gagggactcgcgcagatcttcgaccaggccggcgtcgtcgaggtcgccgaggttatctac 173 Query: 205 aaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggag 264 ||| ||||||| | |||||||||||| || || ||||| |||||||| || ||||||| Sbjct: 174 aacagagaaactggccagagccgtgggtttggttttgttaccatgagcactgttgaggaa 233 Query: 265 gctga 269 ||||| Sbjct: 234 gctga 238 Score = 125 bits (63), Expect = 2e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| |||||| ||||||||||||| || ||||||||| ||||| || ||||||| ||| Sbjct: 363 tatgttggcaacttgccatggcaagttgatgactctaggctggtgcagttgttcagcgag 422 Query: 454 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggc 513 ||||| |||| || ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 423 catggagaagttgttgatgctaaggttgtctacgacagagaaactgggcgctcacgagga 482 Query: 514 ttcggtttcgtgacaatggcgtcgcaggaggaact 548 |||||||| || |||||| ||| |||||||||| Sbjct: 483 ttcggttttgtatcaatggtgtcaaaggaggaact 517
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 188 bits (95), Expect = 1e-44 Identities = 161/183 (87%) Strand = Plus / Plus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 ||||||||| ||||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 360 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 419 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaa 206 ||| ||||| ||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 420 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 479 Query: 207 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggc 266 | ||| | | ||||||||||||||| || ||||| ||||||||||| |||||||| || Sbjct: 480 caaagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 539 Query: 267 tga 269 ||| Sbjct: 540 tga 542 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||| ||| Sbjct: 667 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 726 Query: 454 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggc 513 ||||| |||| || |||| | | |||| || |||||||| |||||||| || ||||| Sbjct: 727 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagga 786 Query: 514 ttcggttt 521 || ||||| Sbjct: 787 tttggttt 794
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 27874510 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 27874451 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggt 197 | ||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27874450 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 27874400 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 27873734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 27873675 Query: 454 catgg 458 ||||| Sbjct: 27873674 catgg 27873670 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 194 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 253 ||||||| |||||| |||| || | |||||||||||||| ||||| || |||||||||| Sbjct: 27874265 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 27874206 Query: 254 ccattgagga 263 | |||||||| Sbjct: 27874205 cgattgagga 27874196
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 87 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 146 |||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 82588 ggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcga 82529 Query: 147 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggt 197 | ||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 82528 gggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 82478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 394 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 453 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 81812 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 81753 Query: 454 catgg 458 ||||| Sbjct: 81752 catgg 81748 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 194 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 253 ||||||| |||||| |||| || | |||||||||||||| ||||| || |||||||||| Sbjct: 82343 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 82284 Query: 254 ccattgagga 263 | |||||||| Sbjct: 82283 cgattgagga 82274
>dbj|AK070749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064A16, full insert sequence Length = 742 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||| | ||||||||||||||||| | |||||||||||| |||||||| ||||| Sbjct: 386 gaggaggtcagcgagtacgtggagccgcctgcggaggccaaggtatacgtcgggaaccta 445 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 |||||| || ||||||||||||||||||| || |||||||| |||| |||||||||||| Sbjct: 446 ccctacaacatcgacagcgagcgcctcgcccaactcttcgaacaggaaggcgtcgtcgag 505 Query: 187 gtctccgaggtca 199 ||||||||||||| Sbjct: 506 gtctccgaggtca 518
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Minus Query: 67 gaggaggtcggggagtacgtggagccgccggaggaggccaaggtgtacgtcggcaacctg 126 ||||||||| | ||||||||||||||||| | |||||||||||| |||||||| ||||| Sbjct: 23796 gaggaggtcagcgagtacgtggagccgcctgcggaggccaaggtatacgtcgggaaccta 23737 Query: 127 ccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggcgtcgtcgag 186 |||||| || ||||||||||||||||||| || |||||||| |||| |||||||||||| Sbjct: 23736 ccctacaacatcgacagcgagcgcctcgcccaactcttcgaacaggaaggcgtcgtcgag 23677 Query: 187 gtctccgaggt 197 ||||||||||| Sbjct: 23676 gtctccgaggt 23666
>ref|NM_124404.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G50250 mRNA, complete cds Length = 1071 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 285 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 471 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 530 Query: 286 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 344 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 531 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 589
>ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding AT4G24770 (RBP31) mRNA, complete cds Length = 1254 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 972 gccatctctgccctcgatggacagaacttggaggg 1006 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 735 actgtaaacaaggcagctccaagagg 760 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 924 cgtggattcgggtttgtcac 943
>gb|BT012700.1| Lycopersicon esculentum clone 113574R, mRNA sequence Length = 1329 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtag 280 ||||||||||||||||| || ||||||||| | || || |||||||| ||||||| Sbjct: 560 cgtggattcgggtttgtgacaatgagtaccgtggaagaagctgagaaagctgtag 614
>emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T) Length = 1148 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 952 gccatctctgccctcgatggacagaacttggaggg 986 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 715 actgtaaacaaggcagctccaagagg 740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 904 cgtggattcgggtttgtcac 923
>gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, complete cds Length = 990 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 901 gccatctctgccctcgatggacagaacttggaggg 935 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 664 actgtaaacaaggcagctccaagagg 689 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 853 cgtggattcgggtttgtcac 872
>emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein Length = 1090 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 844 gccatctctgccctcgatggacagaacttggaggg 878 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 607 actgtaaacaaggcagctccaagagg 632 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 796 cgtggattcgggtttgtcac 815
>gb|AY077660.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds Length = 870 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 285 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 460 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 519 Query: 286 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 344 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 520 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 578
>gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 mRNA, complete cds Length = 1171 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 957 gccatctctgccctcgatggacagaacttggaggg 991 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 720 actgtaaacaaggcagctccaagagg 745 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 909 cgtggattcgggtttgtcac 928
>gb|AY039868.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds Length = 1067 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 285 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 466 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 525 Query: 286 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 344 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 526 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 584
>dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp31, partial cds Length = 1035 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 826 gccatctctgccctcgatggacagaacttggaggg 860 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 589 actgtaaacaaggcagctccaagagg 614 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 778 cgtggattcgggtttgtcac 797
>emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA binding protein homologous to nucleolin Length = 872 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 661 gccatctctgccctcgatggacagaacttggaggg 695 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 424 actgtaaacaaggcagctccaagagg 449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 613 cgtggattcgggtttgtcac 632
>gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding protein (rbp31) mRNA, complete cds Length = 1179 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacagagcttggaggg 590 |||||| |||||||||||||||||| ||||||||| Sbjct: 940 gccatctctgccctcgatggacagaacttggaggg 974 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 703 actgtaaacaaggcagctccaagagg 728 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 892 cgtggattcgggtttgtcac 911
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgccctacgacgtcgac 141 |||||||||||||||||||||||| ||||||| Sbjct: 70962 gtgtacgtcggcaacctgccctactccgtcgac 70994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 75398 gtgtacgtcggcaacctgcc 75417 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 65375 gtgtacgtcggcaacctgcc 65394
>ref|XM_476203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 309 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgccctacgacgtcgac 141 |||||||||||||||||||||||| ||||||| Sbjct: 58 gtgtacgtcggcaacctgccctactccgtcgac 90
>emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding protein, involved in plastid mRNA 3' processing Length = 1009 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 551 atgacgccatcgctgccctcgatggacagagcttgga 587 |||||||||| ||||| ||||||||||||| |||||| Sbjct: 590 atgacgccattgctgctctcgatggacagaccttgga 626 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 235 gggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatgtt 287 |||||||| ||||||||||| |||| || |||||||||||||| ||| |||| Sbjct: 274 gggtttgtgaccatgagtacagttgaagaagctgagaaggctgtggagttgtt 326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgccctacgacgtcgac 141 |||||||||||||||||||||||| ||||||| Sbjct: 7457893 gtgtacgtcggcaacctgccctactccgtcgac 7457925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gccgaggaggaggtcggggag 81 ||||||||||||||||||||| Sbjct: 27663760 gccgaggaggaggtcggggag 27663780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 7462329 gtgtacgtcggcaacctgcc 7462348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 7452306 gtgtacgtcggcaacctgcc 7452325
>dbj|AK069616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021C02, full insert sequence Length = 799 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgccctacgacgtcgac 141 |||||||||||||||||||||||| ||||||| Sbjct: 186 gtgtacgtcggcaacctgccctactccgtcgac 218
>emb|AJ421780.1|PAM421780 Persea americana chloroplast mRNA for RNA-binding protein precursor (rbp33 gene) Length = 1253 Score = 48.1 bits (24), Expect = 0.035 Identities = 117/148 (79%) Strand = Plus / Plus Query: 209 gagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctg 268 ||||||| || ||||| || || || || ||||| || |||||||| |||| || || | Sbjct: 534 gagaaacagatcagagtcgcgggtttggttttgtgacgatgagtactgttgaagaagccg 593 Query: 269 agaaggctgtagagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaaca 328 |||| || || ||||||||| | || || ||| | ||||| ||||| ||||||||||| | Sbjct: 594 agaaagcagtggagatgttcaaccgatatgatatcaatggaaggcttttgactgtaaata 653 Query: 329 aggcagctcctagaggcgcccgggtgga 356 | ||||| || ||||| ||||| ||||| Sbjct: 654 aagcagccccaagaggggcccgagtgga 681
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 135 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 177 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 334 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 376 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 442 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 491 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 659 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 708
>gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 agccgtggattcgggtttgtcaccatg 249 |||||||||||||||||||| |||||| Sbjct: 706 agccgtggattcgggtttgtgaccatg 680
>gb|BT013136.1| Lycopersicon esculentum clone 114438F, mRNA sequence Length = 1317 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtag 280 ||||||||||||||||| || ||||| ||| | || || |||||||| ||||||| Sbjct: 575 cgtggattcgggtttgtgacaatgagcaccgtggaagaagctgagaaagctgtag 629
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 135 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 177 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 26158502 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 26158544 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 442 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 491 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 26159713 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 26159762
>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full insert sequence Length = 1052 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 135 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 177 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 334 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 376 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 442 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 491 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 659 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 708
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 135 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 177 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 50360 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 50402 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 442 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 491 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 51571 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 51620
>gb|AY105580.1| Zea mays PCO127552 mRNA sequence Length = 1133 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 223 agccgtggattcgggtttgtcaccatg 249 |||||||||||||||||||| |||||| Sbjct: 425 agccgtggattcgggtttgtgaccatg 451
>ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.54 Identities = 73/90 (81%) Strand = Plus / Plus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 267 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 326 Query: 174 cggcgtcgtcgaggtctccgaggtcatcta 203 |||| ||||||| | |||||||||||| Sbjct: 327 cggctccgtcgagatggtcgaggtcatcta 356
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 3815253 tcggcaacctgccctacgacgt 3815274
>ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03841.1) partial mRNA Length = 3492 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 491 gagacactgggcgctcacgaggcttcggtttcgt 524 |||| ||||| |||||| |||||||||||||||| Sbjct: 113 gagatactggtcgctcaagaggcttcggtttcgt 146
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 40952 actgtaaacaaggcagctccaagagg 40927 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 40763 cgtggattcgggtttgtcac 40744 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gccatcgctgccctcgatggacag 579 |||||| ||||||||||||||||| Sbjct: 40715 gccatctctgccctcgatggacag 40692
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 14556 actgtaaacaaggcagctccaagagg 14581 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacag 579 |||||| ||||||||||||||||| Sbjct: 14793 gccatctctgccctcgatggacag 14816 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 14745 cgtggattcgggtttgtcac 14764
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 11528 actgtaaacaaggcagctccaagagg 11503 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 11339 cgtggattcgggtttgtcac 11320 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gccatcgctgccctcgatggacag 579 |||||| ||||||||||||||||| Sbjct: 11291 gccatctctgccctcgatggacag 11268
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 1630918 tcggcaacctgccctacgacgt 1630897
>gb|AE011966.1| Xanthomonas axonopodis pv. citri str. 306, section 344 of 469 of the complete genome Length = 14190 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 9607 tcggcaacctgccctacgacgt 9628
>gb|AE012422.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 330 of 460 of the complete genome Length = 10431 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 9972 tcggcaacctgccctacgacgt 9993
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds Length = 1217 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 565 gccctcgatggacagagcttggaggg 590 |||||||||||| ||||||||||||| Sbjct: 893 gccctcgatggagagagcttggaggg 918
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 1301245 tcggcaacctgccctacgacgt 1301224
>emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1170 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 739 actgtaaacaaggcagctccaagagg 764 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 563 ctgccctcgatggacagagcttggaggg 590 ||||||||||||||||| ||||||||| Sbjct: 983 ctgccctcgatggacagtacttggaggg 1010 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 928 cgtggattcgggtttgtcac 947
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 cgaggtctccgaggtcatctacaacc 208 |||||||||||||||| ||||||||| Sbjct: 382775 cgaggtctccgaggtcctctacaacc 382800
>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full insert sequence Length = 1112 Score = 44.1 bits (22), Expect = 0.54 Identities = 73/90 (81%) Strand = Plus / Plus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 350 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 409 Query: 174 cggcgtcgtcgaggtctccgaggtcatcta 203 |||| ||||||| | |||||||||||| Sbjct: 410 cggctccgtcgagatggtcgaggtcatcta 439
>dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31, complete cds (exon1, exon2, exon3, exon4) Length = 4135 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 2690 actgtaaacaaggcagctccaagagg 2715 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacag 579 |||||| ||||||||||||||||| Sbjct: 2927 gccatctctgccctcgatggacag 2950 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 2879 cgtggattcgggtttgtcac 2898
>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full insert sequence Length = 1172 Score = 44.1 bits (22), Expect = 0.54 Identities = 73/90 (81%) Strand = Plus / Plus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 358 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 417 Query: 174 cggcgtcgtcgaggtctccgaggtcatcta 203 |||| ||||||| | |||||||||||| Sbjct: 418 cggctccgtcgagatggtcgaggtcatcta 447
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 tcggcaacctgccctacgacgt 137 |||||||||||||||||||||| Sbjct: 1648745 tcggcaacctgccctacgacgt 1648724
>gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-binding proteins 1, 2, and 3 gene, complete cds Length = 2716 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 actgtaaacaaggcagctcctagagg 344 |||||||||||||||||||| ||||| Sbjct: 1870 actgtaaacaaggcagctccaagagg 1895 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 gccatcgctgccctcgatggacag 579 |||||| ||||||||||||||||| Sbjct: 2107 gccatctctgccctcgatggacag 2130 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgtggattcgggtttgtcac 245 |||||||||||||||||||| Sbjct: 2059 cgtggattcgggtttgtcac 2078
>gb|BC109272.1| Homo sapiens jumonji domain containing 4, mRNA (cDNA clone MGC:129896 IMAGE:40027777), complete cds Length = 2335 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa8272 predicted mRNA Length = 1242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ttgacgtggcggccgaggagg 70 ||||||||||||||||||||| Sbjct: 597 ttgacgtggcggccgaggagg 577
>ref|XM_514250.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ12517 (LOC457793), mRNA Length = 1248 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gccgaggaggaggtcggggag 81 ||||||||||||||||||||| Sbjct: 28318 gccgaggaggaggtcggggag 28338
>ref|XM_368259.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00985.4) partial mRNA Length = 1365 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tacgtcggcaacctgccctacgacg 136 |||||||||||||| |||||||||| Sbjct: 730 tacgtcggcaacctcccctacgacg 754
>ref|NM_023007.1| Homo sapiens jumonji domain containing 4 (JMJD4), mRNA Length = 2550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 14706585 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 14706526 Query: 174 cggcgtcgtcgag 186 |||| ||||||| Sbjct: 14706525 cggctccgtcgag 14706513
>gb|BC067081.1| Homo sapiens cDNA clone IMAGE:3608201, partial cds Length = 2146 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 1335 cggcaacctgccctacgacgt 1315
>gb|AF370397.1| Homo sapiens PP10752 mRNA, complete cds Length = 1528 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 721 cggcaacctgccctacgacgt 701
>emb|AL136378.14| Human DNA sequence from clone RP5-870F10 on chromosome 1q42.11-42.3 Contains a novel zinc finger protein pseudogne, two novel genes (FLJ12517), the 5' end of the gene for SVAP1 protein and three CpG islands, complete sequence Length = 84657 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 39605 cggcaacctgccctacgacgt 39585
>emb|AJ720781.1| Gallus gallus mRNA for hypothetical protein, clone 25g18 Length = 1575 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 ggcaacctgccctacgacgtc 138 ||||||||||||||||||||| Sbjct: 321 ggcaacctgccctacgacgtc 341
>emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33Hv protein Length = 1311 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tacgtcggcaacctgccctac 132 ||||||||||||||||||||| Sbjct: 379 tacgtcggcaacctgccctac 399
>gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128398 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tcattcaggatctatgtgggc 402 ||||||||||||||||||||| Sbjct: 19340 tcattcaggatctatgtgggc 19360
>dbj|AK093736.1| Homo sapiens cDNA FLJ36417 fis, clone THYMU2011063 Length = 2205 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 1420 cggcaacctgccctacgacgt 1400
>dbj|AK055266.1| Homo sapiens cDNA FLJ30704 fis, clone FCBBF2001105 Length = 2375 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 1590 cggcaacctgccctacgacgt 1570
>dbj|AK023030.1| Homo sapiens cDNA FLJ12968 fis, clone NT2RP2005815 Length = 2480 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 785 cggcaacctgccctacgacgt 805
>dbj|AK022579.1| Homo sapiens cDNA FLJ12517 fis, clone NT2RM2001784 Length = 2550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 45497 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 45438 Query: 174 cggcgtcgtcgag 186 |||| ||||||| Sbjct: 45437 cggctccgtcgag 45425
>gb|BC011928.2| Homo sapiens jumonji domain containing 4, mRNA (cDNA clone IMAGE:4544682), complete cds Length = 2450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 679 cggcaacctgccctacgacgt 699
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 114 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 173 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 14701119 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 14701060 Query: 174 cggcgtcgtcgag 186 |||| ||||||| Sbjct: 14701059 cggctccgtcgag 14701047
>dbj|AK026908.1| Homo sapiens cDNA: FLJ23255 fis, clone COL05420 Length = 3757 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cggcaacctgccctacgacgt 137 ||||||||||||||||||||| Sbjct: 812 cggcaacctgccctacgacgt 832
>gb|M24634.1|RANATROA R.temporaria skeletal muscle alpha-tropomyosin mRNA, complete cds Length = 1037 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ttgaggaggctgagaaggctg 277 ||||||||||||||||||||| Sbjct: 447 ttgaggaggctgagaaggctg 467
>ref|NM_100497.2| Arabidopsis thaliana DNA binding / transcription factor/ transcriptional activator AT1G06160 mRNA, complete cds Length = 931 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgtggcggccgaggaggagg 73 |||||||||||||||||||| Sbjct: 258 cgtggcggccgaggaggagg 277
>gb|AC159917.3| Aotus nancymaae clone CH258-526A6, complete sequence Length = 165172 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 162575 cattgaggaggctgagaagg 162594
>ref|XM_524308.1| PREDICTED: Pan troglodytes LOC468923 (LOC468923), mRNA Length = 2154 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 930 cttcgagcaggccggcgtcg 949
>ref|XM_507936.1| PREDICTED: Pan troglodytes similar to KIAA0608 protein (LOC450623), mRNA Length = 2589 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggc 104 |||||||||||||||||||| Sbjct: 415 gtggagccgccggaggaggc 434
>ref|XM_476202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 73 gtgtacgtcggcaacctgcc 92
>ref|XM_476204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 58 gtgtacgtcggcaacctgcc 77
>ref|XM_464417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2410 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cgccgtggccgtggccgagg 42 |||||||||||||||||||| Sbjct: 1399 cgccgtggccgtggccgagg 1380
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gcgagcgcctcgcgcagctcttcg 166 |||||||||||||||||| ||||| Sbjct: 532759 gcgagcgcctcgcgcagcccttcg 532736
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 tgacgccatcgctgccctcg 571 |||||||||||||||||||| Sbjct: 693548 tgacgccatcgctgccctcg 693529
>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence Length = 175636 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tgttcagtgagcatggcaaagtgg 466 ||||||||||||||||| |||||| Sbjct: 43720 tgttcagtgagcatggccaagtgg 43697
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccgccgtggccgtggccgag 41 |||||||||||||||||||| Sbjct: 1390741 ccgccgtggccgtggccgag 1390760
>gb|BT014958.1| Arabidopsis thaliana At1g06160 gene, complete cds Length = 735 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgtggcggccgaggaggagg 73 |||||||||||||||||||| Sbjct: 216 cgtggcggccgaggaggagg 235
>gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgagaaggctgtagagatgt 286 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 tcgcgcagctcttcgagcaggccggcgt 179 ||||||||||||||||||| | |||||| Sbjct: 177834 tcgcgcagctcttcgagcatgtcggcgt 177861
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcgagcgcctcgcgcagctc 162 |||||||||||||||||||| Sbjct: 2246638 gcgagcgcctcgcgcagctc 2246657
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 80189 aggtcggggagtacgtggag 80208
>ref|XR_003832.1| PREDICTED: Mus musculus similar to Mitogen-activated protein kinase kinase kinase kinase 1 (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1) (Hematopoietic progenitor kinase) (HPK) (LOC672367), mRNA Length = 2744 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1453 aggtcggggagtacgtggag 1434
>gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgagaaggctgtagagatgt 286 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>ref|XM_539217.2| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 4 isoform 2 (LOC482096), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgacgtcgacagcgagcgcc 151 |||||||||||||||||||| Sbjct: 1753 cgacgtcgacagcgagcgcc 1734
>gb|BT011001.1| Arabidopsis thaliana At1g06160 gene, complete cds Length = 866 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgtggcggccgaggaggagg 73 |||||||||||||||||||| Sbjct: 257 cgtggcggccgaggaggagg 276
>gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complete sequence Length = 162961 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 tgttcagtgagcatggcaaagtgg 466 ||||||||||||||||| |||||| Sbjct: 30227 tgttcagtgagcatggccaagtgg 30250
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 gacagagacactgggcgctc 506 |||||||||||||||||||| Sbjct: 49028 gacagagacactgggcgctc 49009
>gb|BC057785.1| Homo sapiens radial spokehead-like 1, mRNA (cDNA clone IMAGE:5270908), partial cds Length = 2327 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 929 cttcgagcaggccggcgtcg 948
>ref|NM_030785.2| Homo sapiens radial spokehead-like 1 (RSHL1), mRNA Length = 2477 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 1073 cttcgagcaggccggcgtcg 1092
>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete sequence Length = 124990 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tgaggaggctgagaaggctg 277 |||||||||||||||||||| Sbjct: 80267 tgaggaggctgagaaggctg 80286
>emb|AL355341.19| Human DNA sequence from clone RP11-146P21 on chromosome 10 Contains the 3'end of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516), the gene for AD24 protein (FLJ12820), the 5'end of a novel gene (KIAA0608) and a CpG island, complete sequence Length = 153449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggc 104 |||||||||||||||||||| Sbjct: 75068 gtggagccgccggaggaggc 75087
>emb|AL031257.1|HS796I11 Human DNA sequence from clone RP4-796I11 on chromosome 20q12 Contains the 5' end of the TIX1 gene for triple homeobox 1 and a CpG island, complete sequence Length = 77402 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 cctcgatggacagagcttgg 586 |||||||||||||||||||| Sbjct: 50340 cctcgatggacagagcttgg 50321
>emb|Y09010.1|MMHPK1 M.musculus mRNA for serine/threonine kinase Length = 2732 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1449 aggtcggggagtacgtggag 1430
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcgagcgcctcgcgcagctc 162 |||||||||||||||||||| Sbjct: 902055 gcgagcgcctcgcgcagctc 902036
>gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequence Length = 153386 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 40894 cattgaggaggctgagaagg 40913
>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 10/10 Length = 140057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gcaggccggcgtcgtcgagg 187 |||||||||||||||||||| Sbjct: 100716 gcaggccggcgtcgtcgagg 100697
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcgagcgcctcgcgcagctc 162 |||||||||||||||||||| Sbjct: 407980 gcgagcgcctcgcgcagctc 407999
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ctcttcgagcaggccggcgt 179 |||||||||||||||||||| Sbjct: 55827 ctcttcgagcaggccggcgt 55808
>emb|AJ133785.1|TTH133785 Thermus thermophilus dnaA gene and partial dnaN gene Length = 1892 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccgccgtggccgtggccgag 41 |||||||||||||||||||| Sbjct: 499 ccgccgtggccgtggccgag 518
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 gacagagacactgggcgctc 506 |||||||||||||||||||| Sbjct: 6418 gacagagacactgggcgctc 6399
>gb|BC005433.1| Mus musculus mitogen activated protein kinase kinase kinase kinase 1, mRNA (cDNA clone MGC:5927 IMAGE:3494470), complete cds Length = 2783 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1406 aggtcggggagtacgtggag 1387
>emb|AL136761.1|HSM801729 Homo sapiens mRNA; cDNA DKFZp434I0515 (from clone DKFZp434I0515) Length = 2478 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 1073 cttcgagcaggccggcgtcg 1092
>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence Length = 45572 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 3934 cttcgagcaggccggcgtcg 3953
>dbj|AK093068.1| Homo sapiens cDNA FLJ35749 fis, clone TESTI2004490, moderately similar to Strongylocentrotus purpuratus radial spokehead mRNA Length = 1750 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 371 cttcgagcaggccggcgtcg 390
>gb|AC092301.2| Homo sapiens chromosome 19 clone LLNLF-198C12, complete sequence Length = 38888 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 11439 cttcgagcaggccggcgtcg 11420
>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence Length = 67066 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ggcaaagtggtcgatgccag 476 |||||||||||||||||||| Sbjct: 13848 ggcaaagtggtcgatgccag 13867
>dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHad2 (carrying TnHad1) genes, complete cds Length = 15604 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ggcaaagtggtcgatgccag 476 |||||||||||||||||||| Sbjct: 12947 ggcaaagtggtcgatgccag 12966
>dbj|AK143215.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130311C23 product:mitogen activated protein kinase kinase kinase kinase 1, full insert sequence Length = 2724 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1497 aggtcggggagtacgtggag 1478
>dbj|AK146273.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730045A12 product:mitogen activated protein kinase kinase kinase kinase 1, full insert sequence Length = 2680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1397 aggtcggggagtacgtggag 1378
>ref|XM_937729.1| PREDICTED: Homo sapiens TBC1 domain family, member 12 (TBC1D12), mRNA Length = 4666 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggc 104 |||||||||||||||||||| Sbjct: 415 gtggagccgccggaggaggc 434
>ref|XM_051081.12| PREDICTED: Homo sapiens TBC1 domain family, member 12 (TBC1D12), mRNA Length = 4666 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggc 104 |||||||||||||||||||| Sbjct: 415 gtggagccgccggaggaggc 434
>ref|NM_008279.1| Mus musculus mitogen activated protein kinase kinase kinase kinase 1 (Map4k1), mRNA Length = 2783 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 1406 aggtcggggagtacgtggag 1387
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgtggccgtggccgagg 42 |||||||||||||||||||| Sbjct: 1560127 cgccgtggccgtggccgagg 1560146
>gb|BC024832.1| Mus musculus mitogen activated protein kinase kinase kinase kinase 1, mRNA (cDNA clone IMAGE:5356534), partial cds Length = 1568 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aggtcggggagtacgtggag 90 |||||||||||||||||||| Sbjct: 270 aggtcggggagtacgtggag 251
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcgagcgcctcgcgcagctc 162 |||||||||||||||||||| Sbjct: 4378037 gcgagcgcctcgcgcagctc 4378018
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcgagcgcctcgcgcagctc 162 |||||||||||||||||||| Sbjct: 1580112 gcgagcgcctcgcgcagctc 1580093
>ref|XM_624098.1| PREDICTED: Apis mellifera similar to ENSANGP00000022029 (LOC551709), mRNA Length = 3417 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 atgttccatcgctacgatgtgaat 306 |||||||||||||| ||||||||| Sbjct: 1528 atgttccatcgctaagatgtgaat 1505
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 17052063 gcccgccgtggccgtggccg 17052044
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 agagcccgccgtggccgtggccga 40 ||||||||||| |||||||||||| Sbjct: 5744526 agagcccgccgaggccgtggccga 5744503
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cgccgtggccgtggccgagg 42 |||||||||||||||||||| Sbjct: 5064532 cgccgtggccgtggccgagg 5064513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 4425992 gcccgccgtggccgtggccg 4425973
>dbj|AK223347.1| Homo sapiens mRNA for radial spokehead-like 1 variant, clone: TST05604 Length = 2371 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 1046 cttcgagcaggccggcgtcg 1065
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gcaggccggcgtcgtcgagg 187 |||||||||||||||||||| Sbjct: 3270060 gcaggccggcgtcgtcgagg 3270041
>gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 48872 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgtggcggccgaggaggagg 73 |||||||||||||||||||| Sbjct: 8292 cgtggcggccgaggaggagg 8311
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccgccgtggccgtggccgag 41 |||||||||||||||||||| Sbjct: 1848552 ccgccgtggccgtggccgag 1848571
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cgagcgcctcgcgcagctcttcga 167 |||||||||||||||| ||||||| Sbjct: 2942363 cgagcgcctcgcgcaggtcttcga 2942340
>gb|AY390427.1| Oryctolagus cuniculus ras GTPase-activating-like protein IQGAP2 mRNA, complete cds Length = 4861 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gcaacctgccctacgacgtc 138 |||||||||||||||||||| Sbjct: 3107 gcaacctgccctacgacgtc 3126
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 109556 gcccgccgtggccgtggccg 109537
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 agagcccgccgtggccgtggccga 40 ||||||||||| |||||||||||| Sbjct: 60055 agagcccgccgaggccgtggccga 60032
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 agagcccgccgtggccgtggccga 40 ||||||||||| |||||||||||| Sbjct: 136673 agagcccgccgaggccgtggccga 136650
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cgccgtggccgtggccgagg 42 |||||||||||||||||||| Sbjct: 25030 cgccgtggccgtggccgagg 25011
>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12 Length = 64136 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 301 gtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 344 ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 47819 gtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 47776
>dbj|AK098837.1| Homo sapiens cDNA FLJ25971 fis, clone TST05604 Length = 2425 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcgagcaggccggcgtcg 181 |||||||||||||||||||| Sbjct: 1046 cttcgagcaggccggcgtcg 1065
>dbj|AK110418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H08, full insert sequence Length = 2172 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 626 gcccgccgtggccgtggccg 645
>dbj|AK106308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C12, full insert sequence Length = 785 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtacgtcggcaacctgcc 128 |||||||||||||||||||| Sbjct: 171 gtgtacgtcggcaacctgcc 190
>dbj|AK071124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080C23, full insert sequence Length = 1805 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 agagcccgccgtggccgtggccga 40 ||||||||||| |||||||||||| Sbjct: 1460 agagcccgccgaggccgtggccga 1437
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tcgcgcagctcttcgagcag 171 |||||||||||||||||||| Sbjct: 808934 tcgcgcagctcttcgagcag 808915
>dbj|AK064615.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-C04, full insert sequence Length = 2410 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cgccgtggccgtggccgagg 42 |||||||||||||||||||| Sbjct: 1399 cgccgtggccgtggccgagg 1380
>dbj|AK063278.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-C07, full insert sequence Length = 1495 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 690 gcccgccgtggccgtggccg 709
>gb|AY105955.1| Zea mays PCO121693 mRNA sequence Length = 1004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 508 cattgaggaggctgagaagg 527
>emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-452D21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 89861 cattgaggaggctgagaagg 89880
>gb|AC148186.3| Saimiri boliviensis boliviensis clone CH254-359M10, complete sequence Length = 189199 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 38885 cattgaggaggctgagaagg 38904
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 17005439 gcccgccgtggccgtggccg 17005420
>emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC OSJNBa0006M08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136254 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gcccgccgtggccgtggccg 39 |||||||||||||||||||| Sbjct: 96680 gcccgccgtggccgtggccg 96699
>gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 357 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgagaaggctgtagagatgt 286 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>gb|AF012788.1|AF012788 Channa pleurophthalma PLE1 cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgagaaggctgtagagatgt 286 |||||||||||||||||||| Sbjct: 96 tgagaaggctgtagagatgt 77
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cattgaggaggctgagaagg 274 |||||||||||||||||||| Sbjct: 955446 cattgaggaggctgagaagg 955465
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ctaggttggtggagctgttc 447 |||||||||||||||||||| Sbjct: 29755 ctaggttggtggagctgttc 29736
>dbj|AB011180.1| Homo sapiens mRNA for KIAA0608 protein, partial cds Length = 3344 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gtggagccgccggaggaggc 104 |||||||||||||||||||| Sbjct: 155 gtggagccgccggaggaggc 174 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,350,141 Number of Sequences: 3902068 Number of extensions: 4350141 Number of successful extensions: 96493 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94035 Number of HSP's gapped (non-prelim): 2449 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
