| Clone Name | bags20n12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2517 Score = 628 bits (317), Expect = e-177 Identities = 456/501 (91%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 322 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 380 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 381 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 440 Query: 137 gggccccgtccacatcagttggttcaaaggtggcaaaaccaacatatgctacaatgccgt 196 ||| || ||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 441 ggggcctgtccagatcagttggttcaaaggtggcaaaacaaacatatgttacaatgctgt 500 Query: 197 cgaccgcaacgtcgaggctgggaacggggacaagattgcactgtactgggagggcaacga 256 || ||||||||||||||||||||||| |||||||| || |||| ||||||||||| || Sbjct: 501 tgatcgcaacgtcgaggctgggaacggagacaagatcgcgatgtattgggagggcaatga 560 Query: 257 acccggtcaggacgggaagctcacctattctgagctcctggagaaggtttgccagcttgc 316 || |||||||| ||||||||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 561 gcctggtcaggatgggaagctcacctattcagagctcttggacagggtttgccagcttgc 620 Query: 317 caattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacctaccgat 376 ||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| |||| || Sbjct: 621 caattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctacttaccaat 680 Query: 377 gttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtccattcggt 436 |||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| Sbjct: 681 gttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttcactcggt 740 Query: 437 tgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcctaa 496 ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 741 tgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcctaa 800 Query: 497 gcttgtgctcacttgcaatgc 517 ||||||| ||||||||||||| Sbjct: 801 gcttgtgatcacttgcaatgc 821
>ref|XM_506818.1| PREDICTED Oryza sativa (japonica cultivar-group), P0415B12.41 mRNA Length = 2763 Score = 628 bits (317), Expect = e-177 Identities = 456/501 (91%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 574 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 632 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 633 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 692 Query: 137 gggccccgtccacatcagttggttcaaaggtggcaaaaccaacatatgctacaatgccgt 196 ||| || ||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 693 ggggcctgtccagatcagttggttcaaaggtggcaaaacaaacatatgttacaatgctgt 752 Query: 197 cgaccgcaacgtcgaggctgggaacggggacaagattgcactgtactgggagggcaacga 256 || ||||||||||||||||||||||| |||||||| || |||| ||||||||||| || Sbjct: 753 tgatcgcaacgtcgaggctgggaacggagacaagatcgcgatgtattgggagggcaatga 812 Query: 257 acccggtcaggacgggaagctcacctattctgagctcctggagaaggtttgccagcttgc 316 || |||||||| ||||||||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 813 gcctggtcaggatgggaagctcacctattcagagctcttggacagggtttgccagcttgc 872 Query: 317 caattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacctaccgat 376 ||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| |||| || Sbjct: 873 caattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctacttaccaat 932 Query: 377 gttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtccattcggt 436 |||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| Sbjct: 933 gttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttcactcggt 992 Query: 437 tgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcctaa 496 ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 993 tgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcctaa 1052 Query: 497 gcttgtgctcacttgcaatgc 517 ||||||| ||||||||||||| Sbjct: 1053 gcttgtgatcacttgcaatgc 1073
>dbj|AK067696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F19, full insert sequence Length = 2516 Score = 628 bits (317), Expect = e-177 Identities = 456/501 (91%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 321 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 379 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 380 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 439 Query: 137 gggccccgtccacatcagttggttcaaaggtggcaaaaccaacatatgctacaatgccgt 196 ||| || ||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 440 ggggcctgtccagatcagttggttcaaaggtggcaaaacaaacatatgttacaatgctgt 499 Query: 197 cgaccgcaacgtcgaggctgggaacggggacaagattgcactgtactgggagggcaacga 256 || ||||||||||||||||||||||| |||||||| || |||| ||||||||||| || Sbjct: 500 tgatcgcaacgtcgaggctgggaacggagacaagatcgcgatgtattgggagggcaatga 559 Query: 257 acccggtcaggacgggaagctcacctattctgagctcctggagaaggtttgccagcttgc 316 || |||||||| ||||||||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 560 gcctggtcaggatgggaagctcacctattcagagctcttggacagggtttgccagcttgc 619 Query: 317 caattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacctaccgat 376 ||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| |||| || Sbjct: 620 caattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctacttaccaat 679 Query: 377 gttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtccattcggt 436 |||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| Sbjct: 680 gttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttcactcggt 739 Query: 437 tgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcctaa 496 ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 740 tgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcctaa 799 Query: 497 gcttgtgctcacttgcaatgc 517 ||||||| ||||||||||||| Sbjct: 800 gcttgtgatcacttgcaatgc 820
>dbj|AK066073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P13, full insert sequence Length = 2763 Score = 628 bits (317), Expect = e-177 Identities = 456/501 (91%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 574 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 632 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 633 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 692 Query: 137 gggccccgtccacatcagttggttcaaaggtggcaaaaccaacatatgctacaatgccgt 196 ||| || ||||| |||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 693 ggggcctgtccagatcagttggttcaaaggtggcaaaacaaacatatgttacaatgctgt 752 Query: 197 cgaccgcaacgtcgaggctgggaacggggacaagattgcactgtactgggagggcaacga 256 || ||||||||||||||||||||||| |||||||| || |||| ||||||||||| || Sbjct: 753 tgatcgcaacgtcgaggctgggaacggagacaagatcgcgatgtattgggagggcaatga 812 Query: 257 acccggtcaggacgggaagctcacctattctgagctcctggagaaggtttgccagcttgc 316 || |||||||| ||||||||||||||||| |||||| |||| | ||||||||||||||| Sbjct: 813 gcctggtcaggatgggaagctcacctattcagagctcttggacagggtttgccagcttgc 872 Query: 317 caattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacctaccgat 376 ||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| |||| || Sbjct: 873 caattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctacttaccaat 932 Query: 377 gttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtccattcggt 436 |||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| Sbjct: 933 gttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttcactcggt 992 Query: 437 tgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcctaa 496 ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 993 tgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcctaa 1052 Query: 497 gcttgtgctcacttgcaatgc 517 ||||||| ||||||||||||| Sbjct: 1053 gcttgtgatcacttgcaatgc 1073
>ref|XM_472384.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 329 bits (166), Expect = 5e-87 Identities = 388/462 (83%) Strand = Plus / Plus Query: 42 ccggccgggttctggtcggagatcgccgacgccttctactggaaggagaagtggaacccc 101 |||||||||||||||||||||||||| || | |||||||||||| | ||||||||||| Sbjct: 25 ccggccgggttctggtcggagatcgcggagacgttctactggaagcacaagtggaaccct 84 Query: 102 agcgaggtctgctccgagaacctcgacgccagcaagggccccgtccacatcagttggttc 161 |||||||||| ||||||| || || | || |||||| || || | ||| |||||| Sbjct: 85 gacgaggtctgcaccgagaatctggatgtcaccaaggggccgatcaagatcgaatggttc 144 Query: 162 aaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggctgggaac 221 ||||| ||||| ||||| |||||||||||||| || ||||||||||| |||||||| || Sbjct: 145 aaagggggcaagaccaatatatgctacaatgcggtggaccgcaacgtggaggctggcgac 204 Query: 222 ggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaagctcacc 281 || || ||||| || |||||||||| || ||||| ||||| ||||||| |||||||||| Sbjct: 205 ggcgagaagatagcgatgtactgggaagggaacgagcccggccaggacgcgaagctcacc 264 Query: 282 tattctgagctcctggagaaggtttgccagcttgccaattacttgaagagtgttggggtc 341 || || ||||||||| | |||||||||||||| || |||||| ||||||| || || ||| Sbjct: 265 tactccgagctcctgaacaaggtttgccagctggcaaattacctgaagagcgtcggcgtc 324 Query: 342 ggcaagggggatgccgtggtgatctacctaccgatgttgctggagcttcccattgccatg 401 || ||||| |||||||||||||||||||| |||||| || ||||||| |||||||| ||| Sbjct: 325 gggaagggtgatgccgtggtgatctacctgccgatgctgatggagctgcccattgcgatg 384 Query: 402 cttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctctgcggat 461 || || ||||| || || || ||||| ||||||||||||||||||||||||||||| || Sbjct: 385 ctcgcgtgtgctcggattggcgctgttcattcggttgtgtttgctggcttctctgctgac 444 Query: 462 tctctagcccaaaggatcgttgattgcaagcctaagcttgtg 503 | ||||| ||||| ||| |||| |||||||||||| ||||| Sbjct: 445 gcactagcacaaagaatcattgactgcaagcctaaggttgtg 486
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 188 bits (95), Expect = 1e-44 Identities = 129/139 (92%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 19239368 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 19239426 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 19239427 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 19239486 Query: 137 gggccccgtccacatcagt 155 ||| || ||||| |||||| Sbjct: 19239487 ggggcctgtccagatcagt 19239505 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 |||||||||||||||||||| |||||||| |||||||| || || ||||||||||||||| Sbjct: 19239595 tggttcaaaggtggcaaaacaaacatatgttacaatgctgttgatcgcaacgtcgaggct 19239654 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 |||||||| |||||||| || |||| ||||||||||| || || |||||||| |||||| Sbjct: 19239655 gggaacggagacaagatcgcgatgtattgggagggcaatgagcctggtcaggatgggaag 19239714 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 ||||||||||| |||||| |||| | |||||||||| Sbjct: 19239715 ctcacctattcagagctcttggacagggtttgccag 19239750 Score = 157 bits (79), Expect = 4e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 310 agcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacc 369 |||||||||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| Sbjct: 19239868 agcttgccaattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctact 19239927 Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||||||||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 19239928 taccaatgttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttc 19239987 Query: 430 attcggt 436 | ||||| Sbjct: 19239988 actcggt 19239994 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 19240072 ggttgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcc 19240131 Query: 494 taagcttgtgctcacttgcaatgc 517 |||||||||| ||||||||||||| Sbjct: 19240132 taagcttgtgatcacttgcaatgc 19240155
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 188 bits (95), Expect = 1e-44 Identities = 129/139 (92%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 7166 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 7224 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 7225 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 7284 Query: 137 gggccccgtccacatcagt 155 ||| || ||||| |||||| Sbjct: 7285 ggggcctgtccagatcagt 7303 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 |||||||||||||||||||| |||||||| |||||||| || || ||||||||||||||| Sbjct: 7393 tggttcaaaggtggcaaaacaaacatatgttacaatgctgttgatcgcaacgtcgaggct 7452 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 |||||||| |||||||| || |||| ||||||||||| || || |||||||| |||||| Sbjct: 7453 gggaacggagacaagatcgcgatgtattgggagggcaatgagcctggtcaggatgggaag 7512 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 ||||||||||| |||||| |||| | |||||||||| Sbjct: 7513 ctcacctattcagagctcttggacagggtttgccag 7548 Score = 157 bits (79), Expect = 4e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 310 agcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacc 369 |||||||||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| Sbjct: 7666 agcttgccaattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctact 7725 Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||||||||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 7726 taccaatgttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttc 7785 Query: 430 attcggt 436 | ||||| Sbjct: 7786 actcggt 7792 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 7870 ggttgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcc 7929 Query: 494 taagcttgtgctcacttgcaatgc 517 |||||||||| ||||||||||||| Sbjct: 7930 taagcttgtgatcacttgcaatgc 7953
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 188 bits (95), Expect = 1e-44 Identities = 129/139 (92%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 17 atgtacgagaggtccatcaaggnacccggccgggttctggtcggagatcgccgacgcctt 76 ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 137617 atgtatgagaggtcaatcaacg-acccggccgggttctggtcggagatcgccgacgcctt 137675 Query: 77 ctactggaaggagaagtggaaccccagcgaggtctgctccgagaacctcgacgccagcaa 136 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 137676 ctactggaaggagaagtggaaccccagtgaggtctgctccgagaacctcgacgtcaccaa 137735 Query: 137 gggccccgtccacatcagt 155 ||| || ||||| |||||| Sbjct: 137736 ggggcctgtccagatcagt 137754 Score = 167 bits (84), Expect = 5e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 |||||||||||||||||||| |||||||| |||||||| || || ||||||||||||||| Sbjct: 137844 tggttcaaaggtggcaaaacaaacatatgttacaatgctgttgatcgcaacgtcgaggct 137903 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 |||||||| |||||||| || |||| ||||||||||| || || |||||||| |||||| Sbjct: 137904 gggaacggagacaagatcgcgatgtattgggagggcaatgagcctggtcaggatgggaag 137963 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 ||||||||||| |||||| |||| | |||||||||| Sbjct: 137964 ctcacctattcagagctcttggacagggtttgccag 137999 Score = 157 bits (79), Expect = 4e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 310 agcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctacc 369 |||||||||||||||||||||||||||| ||||||||||| ||||| ||| | |||||| Sbjct: 138117 agcttgccaattacttgaagagtgttggtgtcggcaagggtgatgctgtgatcatctact 138176 Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||||||||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 138177 taccaatgttgctggagcttcccattgccatgcttgcttgtgcccgcattggtgctgttc 138236 Query: 430 attcggt 436 | ||||| Sbjct: 138237 actcggt 138243 Score = 127 bits (64), Expect = 4e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 138321 ggttgtatttgctggcttttctgcggattccctggcccaaaggatcgttgattgcaagcc 138380 Query: 494 taagcttgtgctcacttgcaatgc 517 |||||||||| ||||||||||||| Sbjct: 138381 taagcttgtgatcacttgcaatgc 138404
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 ||||||||||| ||||| ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 57473 tggttcaaagggggcaagaccaatatatgctacaatgcggtggaccgcaacgtggaggct 57532 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 || |||| || ||||| || |||||||||| || ||||| ||||| ||||||| |||| Sbjct: 57533 ggcgacggcgagaagatagcgatgtactgggaagggaacgagcccggccaggacgcgaag 57592 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 |||||||| || ||||||||| | |||||||||||| Sbjct: 57593 ctcacctactccgagctcctgaacaaggtttgccag 57628 Score = 95.6 bits (48), Expect = 1e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 309 cagcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctac 368 ||||| || |||||| ||||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 57768 cagctggcaaattacctgaagagcgtcggcgtcgggaagggtgatgccgtggtgatctac 57827 Query: 369 ctaccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtc 428 || |||||| || ||||||| |||||||| ||||| || ||||| || || || ||||| Sbjct: 57828 ctgccgatgctgatggagctgcccattgcgatgctcgcgtgtgctcggattggcgctgtt 57887 Query: 429 cattcggt 436 |||||||| Sbjct: 57888 cattcggt 57895 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 42 ccggccgggttctggtcggagatcgccgacgccttctactggaaggagaagtggaacccc 101 |||||||||||||||||||||||||| || | |||||||||||| | ||||||||||| Sbjct: 57254 ccggccgggttctggtcggagatcgcggagacgttctactggaagcacaagtggaaccct 57313 Query: 102 agcgaggtctgctccgagaa 121 |||||||||| ||||||| Sbjct: 57314 gacgaggtctgcaccgagaa 57333 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||||||||||||||||||||| || | ||||| ||||| ||| |||| |||||||| Sbjct: 57982 ggttgtgtttgctggcttctctgctgacgcactagcacaaagaatcattgactgcaagcc 58041 Query: 494 taagcttgtg 503 |||| ||||| Sbjct: 58042 taaggttgtg 58051
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 ||||||||||| ||||| ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 150232 tggttcaaagggggcaagaccaatatatgctacaatgcggtggaccgcaacgtggaggct 150291 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 || |||| || ||||| || |||||||||| || ||||| ||||| ||||||| |||| Sbjct: 150292 ggcgacggcgagaagatagcgatgtactgggaagggaacgagcccggccaggacgcgaag 150351 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 |||||||| || ||||||||| | |||||||||||| Sbjct: 150352 ctcacctactccgagctcctgaacaaggtttgccag 150387 Score = 95.6 bits (48), Expect = 1e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 309 cagcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctac 368 ||||| || |||||| ||||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 150527 cagctggcaaattacctgaagagcgtcggcgtcgggaagggtgatgccgtggtgatctac 150586 Query: 369 ctaccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtc 428 || |||||| || ||||||| |||||||| ||||| || ||||| || || || ||||| Sbjct: 150587 ctgccgatgctgatggagctgcccattgcgatgctcgcgtgtgctcggattggcgctgtt 150646 Query: 429 cattcggt 436 |||||||| Sbjct: 150647 cattcggt 150654 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 42 ccggccgggttctggtcggagatcgccgacgccttctactggaaggagaagtggaacccc 101 |||||||||||||||||||||||||| || | |||||||||||| | ||||||||||| Sbjct: 150013 ccggccgggttctggtcggagatcgcggagacgttctactggaagcacaagtggaaccct 150072 Query: 102 agcgaggtctgctccgagaa 121 |||||||||| ||||||| Sbjct: 150073 gacgaggtctgcaccgagaa 150092 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||||||||||||||||||||| || | ||||| ||||| ||| |||| |||||||| Sbjct: 150741 ggttgtgtttgctggcttctctgctgacgcactagcacaaagaatcattgactgcaagcc 150800 Query: 494 taagcttgtg 503 |||| ||||| Sbjct: 150801 taaggttgtg 150810
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 156 tggttcaaaggtggcaaaaccaacatatgctacaatgccgtcgaccgcaacgtcgaggct 215 ||||||||||| ||||| ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 20087569 tggttcaaagggggcaagaccaatatatgctacaatgcggtggaccgcaacgtggaggct 20087628 Query: 216 gggaacggggacaagattgcactgtactgggagggcaacgaacccggtcaggacgggaag 275 || |||| || ||||| || |||||||||| || ||||| ||||| ||||||| |||| Sbjct: 20087629 ggcgacggcgagaagatagcgatgtactgggaagggaacgagcccggccaggacgcgaag 20087688 Query: 276 ctcacctattctgagctcctggagaaggtttgccag 311 |||||||| || ||||||||| | |||||||||||| Sbjct: 20087689 ctcacctactccgagctcctgaacaaggtttgccag 20087724 Score = 95.6 bits (48), Expect = 1e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 309 cagcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtgatctac 368 ||||| || |||||| ||||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 20087864 cagctggcaaattacctgaagagcgtcggcgtcgggaagggtgatgccgtggtgatctac 20087923 Query: 369 ctaccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtc 428 || |||||| || ||||||| |||||||| ||||| || ||||| || || || ||||| Sbjct: 20087924 ctgccgatgctgatggagctgcccattgcgatgctcgcgtgtgctcggattggcgctgtt 20087983 Query: 429 cattcggt 436 |||||||| Sbjct: 20087984 cattcggt 20087991 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 42 ccggccgggttctggtcggagatcgccgacgccttctactggaaggagaagtggaacccc 101 |||||||||||||||||||||||||| || | |||||||||||| | ||||||||||| Sbjct: 20087350 ccggccgggttctggtcggagatcgcggagacgttctactggaagcacaagtggaaccct 20087409 Query: 102 agcgaggtctgctccgagaa 121 |||||||||| ||||||| Sbjct: 20087410 gacgaggtctgcaccgagaa 20087429 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 434 ggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||||||||||||||||||||| || | ||||| ||||| ||| |||| |||||||| Sbjct: 20088078 ggttgtgtttgctggcttctctgctgacgcactagcacaaagaatcattgactgcaagcc 20088137 Query: 494 taagcttgtg 503 |||| ||||| Sbjct: 20088138 taaggttgtg 20088147
>ref|NM_123046.2| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.1 mRNA, complete cds Length = 2521 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 714 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 773 Query: 430 attcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgca 489 ||||||| || |||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 774 attcggtcgtttttgctggattttctgcggactctcttgcccaaagaatcgttgattgca 833 Query: 490 agcc 493 |||| Sbjct: 834 agcc 837 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaa 328 |||||||||||||| ||||||||||| Sbjct: 647 gtttgccagcttgctaattacttgaa 672
>ref|NM_001036897.1| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.2 mRNA, complete cds Length = 2570 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 676 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 735 Query: 430 attcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgca 489 ||||||| || |||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 736 attcggtcgtttttgctggattttctgcggactctcttgcccaaagaatcgttgattgca 795 Query: 490 agcc 493 |||| Sbjct: 796 agcc 799 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaa 328 |||||||||||||| ||||||||||| Sbjct: 609 gtttgccagcttgctaattacttgaa 634
>gb|AY045880.1| Arabidopsis thaliana putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2454 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 714 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 773 Query: 430 attcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgca 489 ||||||| || |||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 774 attcggtcgtttttgctggattttctgcggactctcttgcccaaagaatcgttgattgca 833 Query: 490 agcc 493 |||| Sbjct: 834 agcc 837 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaa 328 |||||||||||||| ||||||||||| Sbjct: 647 gtttgccagcttgctaattacttgaa 672
>gb|BT002371.1| Arabidopsis thaliana clone U10380 putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2113 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 536 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 595 Query: 430 attcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgca 489 ||||||| || |||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 596 attcggtcgtttttgctggattttctgcggactctcttgcccaaagaatcgttgattgca 655 Query: 490 agcc 493 |||| Sbjct: 656 agcc 659 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaa 328 |||||||||||||| ||||||||||| Sbjct: 469 gtttgccagcttgctaattacttgaa 494
>gb|AF036618.1|AF036618 Arabidopsis thaliana acetyl-CoA synthetase mRNA, complete cds Length = 2382 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 579 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 638 Query: 430 attcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgttgattgca 489 ||||||| || |||||||| || |||||||| ||||| |||||||| ||||||||||||| Sbjct: 639 attcggtcgtatttgctggattttctgcggactctcttgcccaaagaatcgttgattgca 698 Query: 490 agcc 493 |||| Sbjct: 699 agcc 702 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaa 328 |||||||||||||| ||||||||||| Sbjct: 512 gtttgccagcttgctaattacttgaa 537
>emb|X98506.1|STACS S.tuberosum mRNA for acetyl-CoA synthetase Length = 2383 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/187 (80%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaattacttgaagagtgttggggtcggcaagggggatgccgtggtg 362 ||||||||||| || ||||| ||||| |||||| ||| |||||| ||||| || || Sbjct: 553 gtttgccagctagcaaattatttgaaagatgttggagtccacaagggtgatgcagttgtc 612 Query: 363 atctacctaccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggt 422 |||||| |||| ||| | ||||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 613 atctacttacccatgcttatggagctaccaattgcaatgcttgcttgtgctcgtattggt 672 Query: 423 gctgtccattcggttgtgtttgctggcttctctgcggattctctagcccaaaggatcgtt 482 || | || ||||||||||||||||| ||||| || || ||||| || ||||||||| | Sbjct: 673 gccattcactcggttgtgtttgctggtttctcagctgaatctcttgctcaaaggatcata 732 Query: 483 gattgca 489 ||||||| Sbjct: 733 gattgca 739
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8 Length = 70098 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 441 tttgctggcttctctgcggattctctagcccaaaggatcgttgattgcaagcc 493 |||||||| || |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 67893 tttgctggattttctgcggactctcttgcccaaagaatcgttgattgcaagcc 67841 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 370 taccgatgttgctggagcttcccattgccatgcttgcatgtgcccgtatcggtgctgtcc 429 |||| |||||| |||| |||||||| || |||||||||||||| | ||||| ||||| | Sbjct: 68059 tacctatgttgatggaacttcccatcgctatgcttgcatgtgcaaggatcggagctgttc 68000 Query: 430 attcggt 436 ||||||| Sbjct: 67999 attcggt 67993
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtt 442 ||||||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 2304715 gccatgcttgcctgtgcgcggatcggtgcggtgcattcggttgtgtt 2304669
>gb|M94729.1|PBLACOASYN Phycomyces blakesleeanus acetyl-coenzyme A synthetase (facA) gene, complete cds Length = 3000 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 405 gcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctctgc 457 |||||||||||||| |||||| |||| || ||||| |||||||| || ||||| Sbjct: 957 gcatgtgcccgtattggtgctatccactctgttgtctttgctggtttttctgc 1009
>ref|NM_001026035.2| Caenorhabditis elegans C36A4.9b (C36A4.9) mRNA, complete cds Length = 2066 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Plus Query: 394 ttgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttct 453 |||| |||||||| |||||||||||||| || | ||||| ||||| || ||||| |||| Sbjct: 520 ttgcaatgcttgcgtgtgcccgtatcggagcaatgcattctgttgttttcgctggtttct 579 Query: 454 ctgc 457 |||| Sbjct: 580 ctgc 583
>ref|NM_001026034.2| Caenorhabditis elegans C36A4.9a (C36A4.9) mRNA, complete cds Length = 2110 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Plus Query: 394 ttgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttct 453 |||| |||||||| |||||||||||||| || | ||||| ||||| || ||||| |||| Sbjct: 564 ttgcaatgcttgcgtgtgcccgtatcggagcaatgcattctgttgttttcgctggtttct 623 Query: 454 ctgc 457 |||| Sbjct: 624 ctgc 627
>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence Length = 40146 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Plus Query: 394 ttgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttct 453 |||| |||||||| |||||||||||||| || | ||||| ||||| || ||||| |||| Sbjct: 36465 ttgcaatgcttgcgtgtgcccgtatcggagcaatgcattctgttgttttcgctggtttct 36524 Query: 454 ctgc 457 |||| Sbjct: 36525 ctgc 36528
>gb|AY168852.1| Pseudomonas putida pterin-4-alpha-carbinolamine dehydratase (phhB), phenylalanine 4-hydroxylase (phhA), phenylalanine hydroxylase gene cluster transcription activator (phhR), and acetyl-coenzyme A synthetase (acsA) genes, complete cds Length = 5861 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctc 454 |||||||| || ||||||||||| ||||| |||| ||||| ||||| | ||||||||| Sbjct: 4289 gccatgctggcctgtgcccgtattggtgcgatccactcggtggtgttcggtggcttctc 4347
>ref|XM_754123.1| Ustilago maydis 521 hypothetical protein (UM03069.1) partial mRNA Length = 1995 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Plus Query: 408 tgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctctgc 457 ||||| ||||||||||| |||| |||||||| ||||| || |||||||| Sbjct: 481 tgtgctcgtatcggtgccatccactcggttgtctttgccggtttctctgc 530
>gb|AY811526.1| Schistosoma japonicum SJCHGC03435 protein mRNA, partial cds Length = 692 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 gcatgtgcccgtatcggtgctgtccattc 433 |||||||| |||||||||||||| ||||| Sbjct: 535 gcatgtgctcgtatcggtgctgtacattc 563
>ref|XM_861733.1| PREDICTED: Canis familiaris dystonin, transcript variant 17 (DST), mRNA Length = 17644 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 3928 atcagttggttgaaaggtggcaaaa 3952
>ref|XM_861720.1| PREDICTED: Canis familiaris dystonin, transcript variant 16 (DST), mRNA Length = 17550 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 3834 atcagttggttgaaaggtggcaaaa 3858
>ref|XM_861709.1| PREDICTED: Canis familiaris dystonin, transcript variant 15 (DST), mRNA Length = 16630 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 2914 atcagttggttgaaaggtggcaaaa 2938
>ref|XM_861695.1| PREDICTED: Canis familiaris dystonin, transcript variant 14 (DST), mRNA Length = 17884 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4162 atcagttggttgaaaggtggcaaaa 4186
>ref|XM_861682.1| PREDICTED: Canis familiaris dystonin, transcript variant 13 (DST), mRNA Length = 16499 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 2864 atcagttggttgaaaggtggcaaaa 2888
>ref|XM_861669.1| PREDICTED: Canis familiaris dystonin, transcript variant 12 (DST), mRNA Length = 23878 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_861654.1| PREDICTED: Canis familiaris dystonin, transcript variant 11 (DST), mRNA Length = 17962 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_532183.2| PREDICTED: Canis familiaris dystonin, transcript variant 1 (DST), mRNA Length = 24184 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_861627.1| PREDICTED: Canis familiaris dystonin, transcript variant 10 (DST), mRNA Length = 17587 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_861613.1| PREDICTED: Canis familiaris dystonin, transcript variant 9 (DST), mRNA Length = 17755 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4162 atcagttggttgaaaggtggcaaaa 4186
>ref|XM_861601.1| PREDICTED: Canis familiaris dystonin, transcript variant 8 (DST), mRNA Length = 17710 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4162 atcagttggttgaaaggtggcaaaa 4186
>ref|XM_861585.1| PREDICTED: Canis familiaris dystonin, transcript variant 7 (DST), mRNA Length = 17320 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4099 atcagttggttgaaaggtggcaaaa 4123
>ref|XM_861550.1| PREDICTED: Canis familiaris dystonin, transcript variant 4 (DST), mRNA Length = 9201 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 2864 atcagttggttgaaaggtggcaaaa 2888
>ref|XM_861540.1| PREDICTED: Canis familiaris dystonin, transcript variant 3 (DST), mRNA Length = 17716 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_861528.1| PREDICTED: Canis familiaris dystonin, transcript variant 2 (DST), mRNA Length = 18082 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 4366 atcagttggttgaaaggtggcaaaa 4390
>ref|XM_758761.1| Theileria parva strain Muguga chromosome 4 acetyl-coenzyme A synthetase (TP04_0219) partial mRNA Length = 2046 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 402 cttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctc 454 ||||||||||| || ||||| ||||| ||||| ||||| |||| ||| ||||| Sbjct: 538 cttgcatgtgctcgcatcggagctgttcattctgttgtctttggtggtttctc 590
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 399 atgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggctt 451 ||||| || ||||| ||||||||||| || |||||||| || |||| |||||| Sbjct: 1867683 atgctcgcctgtgcgcgtatcggtgcagtgcattcggtggtatttggtggctt 1867631
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 gccatgcttgcatgtgcccgtatcggtgc 424 |||||||| |||||||| ||||||||||| Sbjct: 1223801 gccatgctggcatgtgcacgtatcggtgc 1223773
>gb|AF293450.1|AF293450 Canis familiaris BPAG1-like gene sequence Length = 10560 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 atcagttggttcaaaggtggcaaaa 174 ||||||||||| ||||||||||||| Sbjct: 5434 atcagttggttgaaaggtggcaaaa 5410
>ref|XM_514806.1| PREDICTED: Pan troglodytes acetyl-CoA synthetase 2 (LOC458441), mRNA Length = 1803 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 184 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 243
>ref|NM_185784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aggtttgccagcttgccaat 320 |||||||||||||||||||| Sbjct: 389 aggtttgccagcttgccaat 370
>gb|AE009222.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 248 of 256 of the complete sequence Length = 12589 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 395 tgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctc 454 |||||||||||| || ||||| |||||||| || ||||| || || |||| |||||||| Sbjct: 1600 tgccatgcttgcctgcgcccgcatcggtgccgtgcattccgtcgtctttggcggcttctc 1541
>gb|AC132235.3| Mus musculus BAC clone RP24-497H15 from chromosome 17, complete sequence Length = 180462 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttgtgtttgctggcttctct 455 |||||||||||||||||||| Sbjct: 92011 ttgtgtttgctggcttctct 91992
>ref|NM_139274.1| Homo sapiens acyl-CoA synthetase short-chain family member 2 (ACSS2), transcript variant 2, mRNA Length = 2773 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 448 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 507
>ref|NM_018677.2| Homo sapiens acyl-CoA synthetase short-chain family member 2 (ACSS2), transcript variant 1, mRNA Length = 2925 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 600 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 659
>gb|BC098422.1| Homo sapiens acyl-CoA synthetase short-chain family member 2, mRNA (cDNA clone MGC:104804 IMAGE:5798672), complete cds Length = 2583 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 242 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 301
>gb|BC073846.1| Homo sapiens acyl-CoA synthetase short-chain family member 2, mRNA (cDNA clone IMAGE:5219243), partial cds Length = 2790 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 411 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 470
>gb|BC010141.2| Homo sapiens acyl-CoA synthetase short-chain family member 2, mRNA (cDNA clone IMAGE:4131932), partial cds Length = 2394 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 26 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 85
>gb|BC012172.1| Homo sapiens acyl-CoA synthetase short-chain family member 2, transcript variant 1, mRNA (cDNA clone MGC:20418 IMAGE:4643236), complete cds Length = 2975 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 570 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 629
>ref|XM_534395.2| PREDICTED: Canis familiaris similar to Acetyl-coenzyme A synthetase, cytoplasmic (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) (LOC477205), mRNA Length = 2038 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 436 ttgtgtttgctggcttctctgcggattctcta 467 |||||||||| ||||||||||| || |||||| Sbjct: 618 ttgtgtttgcaggcttctctgcagagtctcta 649
>gb|DQ458983.1| Marmota monax acetyl-coenzyme A synthetase 2 mRNA, partial cds Length = 468 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 436 ttgtgtttgctggcttctctgcggattctcta 467 |||||||||| ||||||||||| || |||||| Sbjct: 275 ttgtgtttgcaggcttctctgcagagtctcta 306
>ref|XM_751417.1| Ustilago maydis 521 hypothetical protein (UM00363.1) partial mRNA Length = 3489 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 391 ccattgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtt 442 ||||||| ||||| |||||||| | ||||| || ||||| ||||||||||| Sbjct: 470 ccattgctatgctggcatgtgcgaggatcggagcggtccactcggttgtgtt 521
>emb|CR749716.1| Homo sapiens mRNA; cDNA DKFZp762G026 (from clone DKFZp762G026) Length = 2695 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 357 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 416
>dbj|AK092281.1| Homo sapiens cDNA FLJ34962 fis, clone NTONG2003897, highly similar to Homo sapiens acetyl-CoA synthetase mRNA Length = 2924 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 559 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 618
>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183291 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaatta 322 |||||||||||||||||||| Sbjct: 66771 gtttgccagcttgccaatta 66790
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Minus Query: 395 tgccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctc 454 |||||||||||| || ||||| |||||||| || ||||| || || |||| |||||||| Sbjct: 2743625 tgccatgcttgcctgcgcccgcatcggtgccgtgcattccgtcgtctttggcggcttctc 2743566
>ref|XM_690203.1| PREDICTED: Danio rerio similar to CG6432-PA (LOC566918), mRNA Length = 981 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 397 ccatgcttgcatgtgcccgtatcggtgc 424 ||||||| || ||||||||||||||||| Sbjct: 245 ccatgctggcctgtgcccgtatcggtgc 272
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aggtttgccagcttgccaat 320 |||||||||||||||||||| Sbjct: 9300845 aggtttgccagcttgccaat 9300826
>gb|AF263614.1|AF263614 Homo sapiens acetyl-CoA synthetase mRNA, complete cds Length = 2106 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 526 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 585
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aggtttgccagcttgccaat 320 |||||||||||||||||||| Sbjct: 68186 aggtttgccagcttgccaat 68167
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aggtttgccagcttgccaat 320 |||||||||||||||||||| Sbjct: 29255 aggtttgccagcttgccaat 29236
>dbj|AK025990.1| Homo sapiens cDNA: FLJ22337 fis, clone HRC05961, highly similar to AF263614 Homo sapiens acetyl-CoA synthetase mRNA Length = 2922 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 582 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 641
>dbj|AK000188.1| Homo sapiens cDNA FLJ20181 fis, clone COLF0188, highly similar to ACSA_ECOLI ACETYL-COENZYME A SYNTHETASE Length = 2940 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 600 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 659
>dbj|AK000162.1| Homo sapiens cDNA FLJ20155 fis, clone COL08754, highly similar to ACSA_ECOLI ACETYL-COENZYME A SYNTHETASE Length = 2802 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 462 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 521
>emb|BX537308.18| Zebrafish DNA sequence from clone DKEY-231A18 in linkage group 4, complete sequence Length = 191880 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 ccatgcttgcatgtgcccgtatcggtgc 424 ||||||| || ||||||||||||||||| Sbjct: 118074 ccatgctggcctgtgcccgtatcggtgc 118047
>gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64 of 83 of the complete sequence Length = 271237 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gtttgccagcttgccaatta 322 |||||||||||||||||||| Sbjct: 100801 gtttgccagcttgccaatta 100820
>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence Length = 217058 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 caattacttgaagagtgttggggt 340 ||||| |||||||||||||||||| Sbjct: 83070 caattgcttgaagagtgttggggt 83093
>emb|AL359946.1|HSM802692 Homo sapiens mRNA; cDNA DKFZp762G026 (from clone DKFZp762G026) Length = 2695 Score = 40.1 bits (20), Expect = 7.0 Identities = 50/60 (83%) Strand = Plus / Plus Query: 396 gccatgcttgcatgtgcccgtatcggtgctgtccattcggttgtgtttgctggcttctct 455 |||||||| ||||||||||| || || ||| | || || |||||||||| ||||||||| Sbjct: 357 gccatgctggcatgtgcccgcattggggctttgcactccattgtgtttgcaggcttctct 416 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,163,240 Number of Sequences: 3902068 Number of extensions: 3163240 Number of successful extensions: 52443 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 52230 Number of HSP's gapped (non-prelim): 227 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)