ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21c02 |
|---|---|
| Clone Library Name | barley_pub |
>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5| Length = 435 Score = 126 bits (317), Expect = 4e-29 Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 1/146 (0%) Frame = +1 Query: 136 ECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCK 315 ECKYY GGCK+GESCR+ H KE + + ELNFLGLP+RPG KECP+YMR GSCK Sbjct: 153 ECKYYFRTGGCKYGESCRFSHM--KEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCK 210 Query: 316 FATNCRFHHPDPTNVVSRD-PLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPS 492 F ++C+F+HPDPT + D PL NG + +A SQ + WS+ + P Sbjct: 211 FGSDCKFNHPDPTAIGGVDSPLYRGNNGG--SFSPKAPSQASSTSWSSTRHMNGTGTAPF 268 Query: 493 LAPAPSYSAGMIPPRGMYPSSEWSGY 570 + +S G+ P +S+W+GY Sbjct: 269 IPSMFPHSRGVTP-----QASDWNGY 289 Score = 68.2 bits (165), Expect = 2e-11 Identities = 36/82 (43%), Positives = 39/82 (47%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKEC 285 E E Q EC YY G CKF C+Y H K R + A N GLPLRP C Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHH--PKNRLPKQAAFSFNDKGLPLRPDQSMC 386 Query: 286 PYYMRTGSCKFATNCRFHHPDP 351 +Y R G CKF CRF H P Sbjct: 387 THYSRYGICKFGPACRFDHSIP 408 Score = 50.4 bits (119), Expect = 4e-06 Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%) Frame = +1 Query: 205 GKERKTEVAKVELNFLGL-PLRPGGKECPYYMRTGSCKFATNCRFHHP 345 G ++K E E + + P+RP ++C +YMRTGSCK+ ++C+F+HP Sbjct: 80 GSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein| ZFN-like 6 Length = 448 Score = 108 bits (270), Expect = 1e-23 Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 5/168 (2%) Frame = +1 Query: 82 KVAKENR---KETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFL 252 ++A++N+ KE +CKYY GGCK+GE+CR+ H K ELNFL Sbjct: 142 QIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAP--ELNFL 199 Query: 253 GLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRD-PLLEHENG-DIPQQNVQAS 426 GLPLRPG ECPYYMR GSCK+ C+F+HPDPT + D P NG I + +A+ Sbjct: 200 GLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKAT 259 Query: 427 SQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGY 570 Q + WS+ + P + S + G+ + EW+GY Sbjct: 260 FQASSTSWSSPRHV--NGTSPFIPVMLSQTHGVTS-----QNPEWNGY 300 Score = 69.7 bits (169), Expect = 6e-12 Identities = 36/79 (45%), Positives = 40/79 (50%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKEC 285 E E Q EC YY G CKF +C+Y H K R ++ LN GLPLRP C Sbjct: 341 EEFPERPDQPECSYYMKTGDCKFKFNCKYHH--PKNRLPKLPPYALNDKGLPLRPDQNIC 398 Query: 286 PYYMRTGSCKFATNCRFHH 342 YY R G CKF CRF H Sbjct: 399 TYYSRYGICKFGPACRFDH 417 Score = 53.5 bits (127), Expect = 5e-07 Identities = 18/29 (62%), Positives = 26/29 (89%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHP 345 P+RPG ++C +YMRTGSCKF ++C+F+HP Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136 Score = 49.7 bits (117), Expect = 7e-06 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHP 345 P RP EC YYM+TG CKF NC++HHP Sbjct: 344 PERPDQPECSYYMKTGDCKFKFNCKYHHP 372 Score = 33.1 bits (74), Expect = 0.67 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLHCEGKERKTE 225 Q C YYS G CKFG +CR+ H TE Sbjct: 395 QNICTYYSRYGICKFGPACRFDHSVQPPYSTE 426
>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3| Length = 465 Score = 102 bits (253), Expect = 1e-21 Identities = 63/168 (37%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYM 297 E Q C+++ G CKFG SC+Y H V V LN++G PLRPG KEC Y+M Sbjct: 96 ERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFM 155 Query: 298 RTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNE 477 RTG CKF + CR+HHP P V + + + P SQ VP S+ Q + Sbjct: 156 RTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQ-TVP--SSQQYGVVL 212 Query: 478 HRVPSLAP-----APSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYTPG 606 R P L P +P M+ P GM P S W+ Y Q + +PG Sbjct: 213 AR-PQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPY-QASVSAMPSPG 258 Score = 72.0 bits (175), Expect = 1e-12 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Frame = +1 Query: 97 NRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVE---LNFLGLPLR 267 N+++T + Q EC+Y+ G CKFG SCR+ H E A E L+ +GLPLR Sbjct: 292 NKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHH------PMEAASPEASTLSHIGLPLR 345 Query: 268 PGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPL 447 PG C ++ + G CKF C+F H ++ +S P D+P +S P Sbjct: 346 PGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSP-SPSSLTDMPVAPYPSSLGTLAPS 404 Query: 448 WSADQ 462 S+DQ Sbjct: 405 SSSDQ 409 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/80 (35%), Positives = 41/80 (51%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKEC 285 ET E + +C YY G C +G CR+ H + R + + P R G C Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNH--PRNRAPVLGGLRTEAGEFPERMGQPVC 103 Query: 286 PYYMRTGSCKFATNCRFHHP 345 ++MRTG+CKF +C++HHP Sbjct: 104 QHFMRTGTCKFGASCKYHHP 123 Score = 53.1 bits (126), Expect = 6e-07 Identities = 24/42 (57%), Positives = 27/42 (64%) Frame = +1 Query: 220 TEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHP 345 T V+ E F P RP EC Y+MRTG CKF T+CRFHHP Sbjct: 288 TGVSNKEQTF---PQRPEQPECQYFMRTGDCKFGTSCRFHHP 326
>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like| Length = 417 Score = 100 bits (249), Expect = 3e-21 Identities = 61/164 (37%), Positives = 78/164 (47%), Gaps = 2/164 (1%) Frame = +1 Query: 85 VAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPL 264 +A K E Q EC+YY G CKFG +CR+ H K++ +V LN LG PL Sbjct: 63 IATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHH--PKDKAGVAGRVALNILGYPL 120 Query: 265 RPGGKECPYYMRTGSCKFATNCRFHHPDPTN-VVSRDPLLEHENGDIPQQNVQASSQLNV 441 RP E YY+RTG CKF C+FHHP P+N V+S + P Q S + Sbjct: 121 RPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGI 180 Query: 442 PLWSADQRALNEHRVPSLA-PAPSYSAGMIPPRGMYPSSEWSGY 570 WS+ VPS PS A +I P+G+ WS Y Sbjct: 181 TNWSSSS------YVPSPRWQGPSSYAPLILPQGVVSVPGWSTY 218 Score = 73.2 bits (178), Expect = 6e-13 Identities = 35/82 (42%), Positives = 45/82 (54%) Frame = +1 Query: 100 RKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK 279 R E Q EC++Y G CKFG CR+ H +ER+ L+ +GLPLRPG Sbjct: 271 RDNIFPERPDQPECQFYMKTGDCKFGAVCRFHH--PRERQIPAPDCVLSPIGLPLRPGEP 328 Query: 280 ECPYYMRTGSCKFATNCRFHHP 345 C +Y R G CKF +C+F HP Sbjct: 329 LCVFYSRYGICKFGPSCKFDHP 350 Score = 49.7 bits (117), Expect = 7e-06 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLL 381 P RP EC +YM+TG CKF CRFHHP + + D +L Sbjct: 276 PERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVL 316 Score = 45.4 bits (106), Expect = 1e-04 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHP 345 P PG +C YY+RTG C+F CRF+HP Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHP 56 Score = 30.4 bits (67), Expect = 4.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLHCEG 207 C +YS G CKFG SC++ H G Sbjct: 330 CVFYSRYGICKFGPSCKFDHPMG 352
>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 437 Score = 98.2 bits (243), Expect = 2e-20 Identities = 61/161 (37%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKF 318 C+++ G CKFG SC+Y H VA V L++LG PLRPG KEC YY+RTG CKF Sbjct: 81 CQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKF 140 Query: 319 ATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQA--SSQLNVPLWSADQRALNEHRVPS 492 CRF+HP P V P + PQ +Q + + + S+ Q L R Sbjct: 141 GLTCRFNHPVPL-AVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSF 199 Query: 493 LAPA---PSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYTPG 606 L + Y M+ P GM P S W+ Y Q L +PG Sbjct: 200 LTGSYLQSPYGPPMVLPPGMVPYSGWNPY-QASLSAMPSPG 239 Score = 68.6 bits (166), Expect = 1e-11 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLH-CEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTG 306 Q EC+Y+ G CKFG SCRY H + KT + L+ +GLPLRPG +C ++ + G Sbjct: 285 QPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIV---LSSIGLPLRPGVAQCTHFAQHG 341 Query: 307 SCKFATNCRFHH 342 CKF C+F H Sbjct: 342 ICKFGPACKFDH 353 Score = 63.5 bits (153), Expect = 5e-10 Identities = 29/80 (36%), Positives = 43/80 (53%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKEC 285 E+ E + +C YY G C +G CR+ H ++R + V LP R G C Sbjct: 24 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNH--PRDRGAVIGGVRGEAGALPERMGHPVC 81 Query: 286 PYYMRTGSCKFATNCRFHHP 345 ++MRTG+CKF +C++HHP Sbjct: 82 QHFMRTGTCKFGASCKYHHP 101 Score = 52.8 bits (125), Expect = 8e-07 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 2/114 (1%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLN 438 P RP EC Y+MRTG CKF ++CR+HHP +P + S + Sbjct: 280 PQRPDQPECQYFMRTGDCKFGSSCRYHHPVDA---------------VPPKTGIVLSSIG 324 Query: 439 VPLWSADQRALN--EHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGPY 594 +PL + + +H + PA + M PS+ S +P+ PY Sbjct: 325 LPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSA--SSLTDMPVAPY 376
>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 439 Score = 97.8 bits (242), Expect = 2e-20 Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 10/180 (5%) Frame = +1 Query: 61 KFNETEQK---VAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVA 231 +FN + + +A K E Q EC+YY G CKFG +C++ H +E+ Sbjct: 102 RFNHPQDRNLAIASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHH--PREKAGIAG 159 Query: 232 KVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQ 411 +V+LN LG PLRP KEC YY++TG CK+ C+FHHP+ N ++ G Sbjct: 160 RVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMA------SSRGSPIYP 213 Query: 412 NVQASSQLNVPL------WSADQRALNEHRVPSLA-PAPSYSAGMIPPRGMYPSSEWSGY 570 +V +S+ P W+ + + +PS PS A MI P+G+ W+ Y Sbjct: 214 SVHSSATAGPPYTGTMASWAFPRGSF----IPSPRWQNPSNYAPMIVPQGLVQVPSWNSY 269 Score = 74.7 bits (182), Expect = 2e-13 Identities = 35/82 (42%), Positives = 45/82 (54%) Frame = +1 Query: 100 RKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK 279 R+ E Q EC+YY G CKFG C++ H + R L+ +GLPLRPG + Sbjct: 325 RENVFPERPDQPECQYYMKTGDCKFGAVCKFHH--PRVRSMPTPDCVLSPVGLPLRPGEE 382 Query: 280 ECPYYMRTGSCKFATNCRFHHP 345 C +Y R G CKF NC+F HP Sbjct: 383 LCKFYSRYGICKFGANCKFDHP 404 Score = 49.3 bits (116), Expect = 9e-06 Identities = 20/41 (48%), Positives = 26/41 (63%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLL 381 P RP EC YYM+TG CKF C+FHHP ++ + D +L Sbjct: 330 PERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVL 370 Score = 47.8 bits (112), Expect = 3e-05 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQ 432 P R G +C YY+RTG C+F +CRF+HP N+ ++ G+ P++ Q Q Sbjct: 78 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMK---GEYPERMGQPECQ 132
>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4| Length = 404 Score = 94.7 bits (234), Expect = 2e-19 Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 3/169 (1%) Frame = +1 Query: 103 KETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKE 282 KE + E Q +C+Y+ G CK+G +C+Y H + + V N +GLP+R G K Sbjct: 84 KEELPERIGQPDCEYFLKTGACKYGPTCKYHH---PKDRNGAQPVMFNVIGLPMRLGEKP 140 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQ 462 CPYY+RTG+C+F C+FHHP P N S + P +++ +S L + + Sbjct: 141 CPYYLRTGTCRFGVACKFHHPQPDNGHS----TAYGMSSFPAADLRYASGLTM---MSTY 193 Query: 463 RALNEHRVP-SLAP-APSYSAGMIPPRGMYP-SSEWSGYHQVPLGPYYT 600 L +VP S P S S G +PP+G P + + + V PYY+ Sbjct: 194 GTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYS 242 Score = 63.2 bits (152), Expect = 6e-10 Identities = 29/78 (37%), Positives = 42/78 (53%) Frame = +1 Query: 112 VSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPY 291 +SE + Q EC+++ G CK+G+ C+Y H R ++ +N LP RPG C Sbjct: 258 LSESSDQPECRFFMNTGTCKYGDDCKYSH--PGVRISQPPPSLINPFVLPARPGQPACGN 315 Query: 292 YMRTGSCKFATNCRFHHP 345 + G CKF NC+F HP Sbjct: 316 FRSYGFCKFGPNCKFDHP 333 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = +1 Query: 208 KERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHP 345 K + E ELN P RPG ++C +Y+RTG C + ++CR++HP Sbjct: 30 KMKVNETGVEELN--PYPDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 468 Score = 86.7 bits (213), Expect = 5e-17 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYM 297 E + C++Y G CKFG SC++ H K ++ V LN G P+R G EC YY+ Sbjct: 89 ERFGEPPCQFYLKTGTCKFGASCKFHH--PKNAGGSMSHVPLNIYGYPVREGDNECSYYL 146 Query: 298 RTGSCKFATNCRFHHPDPTNVVSRDP------LLEHENGDIPQQNVQASSQLNVPLWSAD 459 +TG CKF C+FHHP P P +P Q SS L V Sbjct: 147 KTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRV------ 200 Query: 460 QRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYTPG 606 R L +P +Y ++ P G+ P WS Y P+ P +PG Sbjct: 201 ARTL----LPGSYMQGAYGPMLLTP-GVVPIPGWSPY-SAPVSPALSPG 243 Score = 77.0 bits (188), Expect = 4e-14 Identities = 33/82 (40%), Positives = 50/82 (60%) Frame = +1 Query: 100 RKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK 279 +++ E + EC+YY G CKFG SC++ H ++R A L+ +GLPLRPG + Sbjct: 282 KEQAFPERPGEPECQYYLKTGDCKFGTSCKFHH--PRDRVPPRANCVLSPIGLPLRPGVQ 339 Query: 280 ECPYYMRTGSCKFATNCRFHHP 345 C +Y++ G CKF + C+F HP Sbjct: 340 RCTFYVQNGFCKFGSTCKFDHP 361 Score = 60.8 bits (146), Expect = 3e-09 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKEC 285 ++ E +C YY G C +G CRY H + + + P R G C Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQY---PERFGEPPC 96 Query: 286 PYYMRTGSCKFATNCRFHHP 345 +Y++TG+CKF +C+FHHP Sbjct: 97 QFYLKTGTCKFGASCKFHHP 116 Score = 36.2 bits (82), Expect = 0.079 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 9/114 (7%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKER---------KTEVAKVELNFLGLPLRPGGKEC 285 + C +Y G CKFG +C++ H G R VA ++ L L Sbjct: 339 QRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSS 398 Query: 286 PYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPL 447 + G K A T+ +S + G IP +Q SSQ ++PL Sbjct: 399 STELIAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSLPL 452
>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1| Length = 397 Score = 85.1 bits (209), Expect = 1e-16 Identities = 56/169 (33%), Positives = 77/169 (45%), Gaps = 2/169 (1%) Frame = +1 Query: 70 ETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNF 249 + E +A + E Q EC+YY G CKFG +C++ H K +V LN Sbjct: 68 DRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIA--GRVSLNM 125 Query: 250 LGLPLRPGGKECPYYMRTGSCKFATNCRFHH--PDPTNVVSRDPLLEHENGDIPQQNVQA 423 LG PLR +C Y++RTG CKF C+F+H P PTN++ V Sbjct: 126 LGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMM-----------------VPT 168 Query: 424 SSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGY 570 S Q + P A A + PS SY A +I P+G+ P W+ Y Sbjct: 169 SGQQSYPWSRASFIASPRWQDPS-----SY-ASLIMPQGVVPVQGWNPY 211 Score = 72.8 bits (177), Expect = 8e-13 Identities = 33/82 (40%), Positives = 46/82 (56%) Frame = +1 Query: 100 RKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK 279 R+ E Q EC++Y G CKFG C++ H ++R+ L+ +GLPLRPG Sbjct: 267 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHH--PRDRQAPPPDCLLSSIGLPLRPGEP 324 Query: 280 ECPYYMRTGSCKFATNCRFHHP 345 C +Y R G CKF +C+F HP Sbjct: 325 LCVFYTRYGICKFGPSCKFDHP 346 Score = 52.4 bits (124), Expect = 1e-06 Identities = 22/41 (53%), Positives = 25/41 (60%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLL 381 P RPG EC +YM+TG CKF T C+FHHP D LL Sbjct: 272 PERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLL 312 Score = 48.1 bits (113), Expect = 2e-05 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVV 363 P RPG +C YY+RTG C+F + CRF+HP +V Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELV 72
>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 476 Score = 84.7 bits (208), Expect = 2e-16 Identities = 38/77 (49%), Positives = 47/77 (61%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYM 297 E Q C+YY G CKFG +C+Y H ++ V V LN G P+R G KEC YYM Sbjct: 107 ERAGQPICEYYMKTGTCKFGTNCKYHH---PKQDGAVLPVMLNNSGFPIRLGEKECSYYM 163 Query: 298 RTGSCKFATNCRFHHPD 348 +TG CKF T C+FHHP+ Sbjct: 164 KTGQCKFGTTCKFHHPE 180 Score = 73.6 bits (179), Expect = 4e-13 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 9/178 (5%) Frame = +1 Query: 46 GIYLKKFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTE 225 G Y+ + T Q + ++ E Q +C+YY G CKFG +C+Y H +E Sbjct: 283 GPYVPYASSTGQS-SNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHH--PRELSAP 339 Query: 226 VAKVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRD--PLLEHENGD 399 + +N L LPLRPG + C YY + G C++ C++ HP T S PL + Sbjct: 340 KSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPIAP 399 Query: 400 IP-------QQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPS 552 P S L S +++N+ P A P G I P+G++P+ Sbjct: 400 YPIGFSIATLAPSSPSPDLRPEYISTKDQSVNQVTSPVAASEP---VGSILPKGVFPA 454 Score = 72.0 bits (175), Expect = 1e-12 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGL--PLRPGGKECPY 291 E +E+C YY G C FG+ CRY H + TE N L P R G C Y Sbjct: 58 ERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGG-TEFGGGARNAAALDYPERAGQPICEY 116 Query: 292 YMRTGSCKFATNCRFHHPDPTNVV 363 YM+TG+CKF TNC++HHP V Sbjct: 117 YMKTGTCKFGTNCKYHHPKQDGAV 140 Score = 47.8 bits (112), Expect = 3e-05 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +1 Query: 256 LPLRPGGKECPYYMRTGSCKFATNCRFHHP 345 LP RPG ++C YY+RTG+C F CR++HP Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHP 85
>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3| Length = 466 Score = 83.2 bits (204), Expect = 6e-16 Identities = 37/77 (48%), Positives = 47/77 (61%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYM 297 E Q C+YY G CKFG +C+Y H R+ V V LN G PLR G K+C YY+ Sbjct: 100 ERPGQPVCEYYMKNGTCKFGSNCKYDH----PREGSVQAVMLNSSGYPLRSGEKDCTYYV 155 Query: 298 RTGSCKFATNCRFHHPD 348 +TG CKF + C+FHHP+ Sbjct: 156 KTGHCKFGSTCKFHHPE 172 Score = 75.9 bits (185), Expect = 9e-14 Identities = 34/72 (47%), Positives = 43/72 (59%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGS 309 Q EC+YY G CKFG +C+Y H + T + L+ LGLPLRPG + C YY + G Sbjct: 302 QPECQYYLKTGSCKFGSACKYHHPQ--YLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGF 359 Query: 310 CKFATNCRFHHP 345 CKF C+F HP Sbjct: 360 CKFGPTCKFDHP 371 Score = 65.5 bits (158), Expect = 1e-10 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLG-------LPLRPGG 276 E + +C YY G C +GE+CRY H + A LN G P RPG Sbjct: 50 ERPGEADCVYYLRTGACGYGENCRYNH-----PRDRAAAAVLNGGGKTTHSAEYPERPGQ 104 Query: 277 KECPYYMRTGSCKFATNCRFHHP 345 C YYM+ G+CKF +NC++ HP Sbjct: 105 PVCEYYMKNGTCKFGSNCKYDHP 127 Score = 53.1 bits (126), Expect = 6e-07 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLL 381 P RPG EC YY++TGSCKF + C++HHP N + +L Sbjct: 297 PARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCML 337 Score = 48.1 bits (113), Expect = 2e-05 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +1 Query: 256 LPLRPGGKECPYYMRTGSCKFATNCRFHHP 345 LP RPG +C YY+RTG+C + NCR++HP Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHP 77 Score = 31.2 bits (69), Expect = 2.5 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEG 207 + C YY+ G CKFG +C++ H G Sbjct: 349 QPCAYYTQHGFCKFGPTCKFDHPMG 373
>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2| Length = 453 Score = 82.0 bits (201), Expect = 1e-15 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Frame = +1 Query: 103 KETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKE 282 ++ + E Q +C+ G CK+G +C+Y H + + V N LGLP+R G K Sbjct: 82 RDQLPERVGQPDCE----TGACKYGPTCKYHH---PKDRNGAGPVLFNVLGLPMRQGEKP 134 Query: 283 CPYYMRTGSCKFATNCRFHHP----DPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLW 450 CPYYM+TG C+F C+FHHP P+N S + + P AS V L Sbjct: 135 CPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFP----YASGMTMVSLP 190 Query: 451 SADQRALNEHRVPSLAPAPSYSAGMI-PPRGMYPSSEWSGY 570 A A+ +VP + +Y M+ P +G+ P W+ Y Sbjct: 191 PATYGAIPRPQVPQ---SQAYMPYMVAPSQGLLPPQGWATY 228 Score = 63.2 bits (152), Expect = 6e-10 Identities = 28/69 (40%), Positives = 38/69 (55%) Frame = +1 Query: 136 ECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCK 315 EC+++ G CK+G+ C+Y H KER + LN + LP RPG C + G CK Sbjct: 266 ECRFFMNTGTCKYGDDCKYSH--PKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCK 323 Query: 316 FATNCRFHH 342 F NC+F H Sbjct: 324 FGANCKFDH 332 Score = 42.7 bits (99), Expect = 8e-04 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHP 345 P RPG ++C +++RTG C + +CR++HP Sbjct: 42 PDRPGERDCQFFLRTGQCGYGNSCRYNHP 70 Score = 35.8 bits (81), Expect = 0.10 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 280 ECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLL 381 EC ++M TG+CK+ +C++ HP + S LL Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLL 299
>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3| Length = 375 Score = 77.8 bits (190), Expect = 2e-14 Identities = 55/184 (29%), Positives = 79/184 (42%), Gaps = 3/184 (1%) Frame = +1 Query: 61 KFNETEQK---VAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVA 231 +FN + +A K E Q EC++Y G CKFG +C++ H K Sbjct: 64 RFNHPHDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGID--G 121 Query: 232 KVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQ 411 V +N L PLRP +C Y++R G CKF C+F+HP + L+ G Sbjct: 122 SVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQST----NLMVSVRGSPVYS 177 Query: 412 NVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGP 591 +Q+ + WS N R+ + S S G G++ S SG + VPLG Sbjct: 178 ALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQG-----GLFSSGFHSG-NSVPLGF 231 Query: 592 YYTP 603 Y P Sbjct: 232 YALP 235 Score = 74.7 bits (182), Expect = 2e-13 Identities = 34/82 (41%), Positives = 47/82 (57%) Frame = +1 Query: 100 RKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK 279 R+ E Q EC++Y G CKFG C++ H ++R+T L+ +GLPLRPG Sbjct: 236 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHH--PRDRQTPPPDCVLSSVGLPLRPGEP 293 Query: 280 ECPYYMRTGSCKFATNCRFHHP 345 C +Y R G CKF +C+F HP Sbjct: 294 LCVFYSRYGICKFGPSCKFDHP 315 Score = 45.1 bits (105), Expect = 2e-04 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +1 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVV 363 P R G +C YY+RTG C+F + CRF+HP +V Sbjct: 40 PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLV 74
>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7| Length = 1303 Score = 41.2 bits (95), Expect = 0.002 Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 5/160 (3%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFL-----GLPLRPGGKECPYYMRT 303 CKY+ G C +G+ C + H +K E+ K + P G C Y T Sbjct: 396 CKYF-VEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 454 Query: 304 GSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHR 483 G+C +C F H DP +R+ LL+ D + + D++ + E + Sbjct: 455 GNCINGDDCMFSH-DPLTEETRE-LLDKMLADDAEAGAE------------DEKEVEELK 500 Query: 484 VPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYTP 603 + P P G+ G+ P+ Q P P P Sbjct: 501 KQGINPLPKPPPGV----GLLPTPPRPPGPQAPTSPNGRP 536
>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6| Length = 1177 Score = 41.2 bits (95), Expect = 0.002 Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 22/194 (11%) Frame = +1 Query: 43 KGIYLKKFNETEQKVAKENRK------ETVSEGTAQEE----CKYYSTPGGCKFGESCRY 192 KG Y+ + Q+ +K +K E +++ T + + CKY+ G C G+ C++ Sbjct: 234 KGPYVFSGMDDFQEYSKPGKKWKVMTQEFINQHTVEHKGKQICKYF-LEGRCIKGDHCKF 292 Query: 193 LHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKF---------ATNCRFHHP 345 H E+K EV K L G + G+ C Y CKF C+F H Sbjct: 293 NHDAELEKKKEVCKYYLQ--GYCTK--GENCIYMHSEFPCKFYHSGAKCYQGDKCKFSHD 348 Query: 346 DPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPS--YSA 519 D L E + + + A + L + D+R L E R + P P Sbjct: 349 D----------LTKETRKLLDKVLNADEE----LVNEDERELEELRKRGITPLPKPPPGV 394 Query: 520 GMIP-PRGMYPSSE 558 G++P P +P S+ Sbjct: 395 GLLPTPSEHFPFSD 408
>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7| homolog Length = 1304 Score = 40.4 bits (93), Expect = 0.004 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 9/151 (5%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFL-----GLPLRPGGKECPYYMRT 303 CKY+ G C +G+ C + H +K E+ K + P G C Y T Sbjct: 395 CKYF-VEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 453 Query: 304 GSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHR 483 G+C +C F H DP +R+ LL+ D + + D++ + E + Sbjct: 454 GNCINGDDCMFSH-DPLTEETRE-LLDKMLADDAEAGAE------------DEKEVEELK 499 Query: 484 VPSLAPAPSYSAGM----IPPRGMYPSSEWS 564 + P P G+ PPR P + S Sbjct: 500 KQGINPLPKPPPGVGLLPTPPRPPGPPAPTS 530
>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6| Length = 1189 Score = 40.0 bits (92), Expect = 0.005 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 14/161 (8%) Frame = +1 Query: 118 EGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYM 297 E ++ CKY+ G C G+ C++ H E++ E+ K L G + G+ C Y Sbjct: 271 EHKGKQICKYF-LEGRCIKGDQCKFDHDAELEKRKEICKFYLQ--GYCTK--GENCIYMH 325 Query: 298 RTGSCKF---------ATNCRFHHPDPTNVVSR--DPLLEHENGDIPQQNVQASSQLNVP 444 CKF NC+F H D T + D +L + Sbjct: 326 NEFPCKFYHSGAKCYQGDNCKFSHDDLTKETKKLLDKVLNTDE----------------E 369 Query: 445 LWSADQRALNEHRVPSLAPAPS--YSAGMIP-PRGMYPSSE 558 L + D+R L E R + P P G++P P +P S+ Sbjct: 370 LINEDERELEELRKRGITPLPKPPPGVGLLPTPPEHFPFSD 410
>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)| Length = 285 Score = 39.3 bits (90), Expect = 0.009 Identities = 24/94 (25%), Positives = 39/94 (41%) Frame = +1 Query: 79 QKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGL 258 Q K +ET + E C+ ++ G C +G C++ H G + +V K NF Sbjct: 155 QPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAHGLG---ELKVKKSCKNFRTK 211 Query: 259 PLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNV 360 P C + + G C + C F H D ++ Sbjct: 212 P-------CVNWEKLGYCPYGRRCCFKHGDDNDI 238
>MKRN1_MOUSE (Q9QXP6) Makorin-1| Length = 481 Score = 39.3 bits (90), Expect = 0.009 Identities = 24/76 (31%), Positives = 31/76 (40%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G CK G++CRY H L P G C Y+ R Sbjct: 56 TKQVTCRYFMH-GVCKEGDNCRYSH------------------DLSDSPYGVVCKYFQR- 95 Query: 304 GSCKFATNCRFHHPDP 351 G C + CR+ H P Sbjct: 96 GYCVYGDRCRYEHSKP 111 Score = 33.1 bits (74), Expect = 0.67 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 91 KENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 +E+ KE + T ++ C Y + G C++GE+C YLH Sbjct: 198 EESEKEPTTVETKKQLCPYAAV-GECRYGENCVYLH 232 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLHCEGKERKTE 225 E+K K+ + E + + C+Y+ G C FG +C Y H R+ E Sbjct: 349 EEKEEKQKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREE 399
>MKRN1_MACEU (Q9TT91) Makorin-1| Length = 478 Score = 37.7 bits (86), Expect = 0.027 Identities = 23/76 (30%), Positives = 29/76 (38%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G CK G +CRY H + V C YY R Sbjct: 52 TKQVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV------------------CRYYQR- 91 Query: 304 GSCKFATNCRFHHPDP 351 G C + CR+ H P Sbjct: 92 GCCAYGDRCRYEHTKP 107 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLHCEGKERKTE 225 E+K K+ + E + + C+Y+ G C FG +C Y H R+ E Sbjct: 345 EEKEEKQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRREE 395
>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)| (TIS11A protein) (TIS11) Length = 320 Score = 37.7 bits (86), Expect = 0.027 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = +1 Query: 109 TVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTE---VAKVELNFLGLPLRPGGK 279 T S E C+ YS G C++G C++ H G+ R+ K EL Sbjct: 92 TTSSRYKTELCRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYKTEL------------ 139 Query: 280 ECPYYMRTGSCKFATNCRFHHPDPT 354 C + G C + + C F H +PT Sbjct: 140 -CHKFYLQGRCPYGSRCHFIH-NPT 162
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 37.4 bits (85), Expect = 0.035 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A N K T S+ + CK Y G C +G+SC++LH Sbjct: 120 ASSNIKSTTSQDYQPDVCKDYKLTGFCGYGDSCKFLH 156
>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)| (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (TPA-induced sequence 11) Length = 319 Score = 37.0 bits (84), Expect = 0.046 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = +1 Query: 109 TVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTE---VAKVELNFLGLPLRPGGK 279 T S E C+ YS G C++G C++ H G+ R+ K EL Sbjct: 91 TTSSRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTEL------------ 138 Query: 280 ECPYYMRTGSCKFATNCRFHHPDPT 354 C + G C + + C F H +PT Sbjct: 139 -CHKFYLQGRCPYGSRCHFIH-NPT 161
>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) Length = 325 Score = 37.0 bits (84), Expect = 0.046 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 4/153 (2%) Frame = +1 Query: 109 TVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTE---VAKVELNFLGLPLRPGGK 279 T S E C+ +S G C++G C++ H G+ R+ K EL Sbjct: 97 TTSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQPSRHPKYKTEL------------ 144 Query: 280 ECPYYMRTGSCKFATNCRF-HHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSA 456 C + G C + + C F H+P + L + + +Q++ S + S Sbjct: 145 -CHKFYLQGRCPYGSRCHFIHNPS-------EDLAAPGHPHVLRQSISFSGLPSGRRTSP 196 Query: 457 DQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSS 555 +L VPS + +PS S PP G P S Sbjct: 197 PPASLAGPSVPSWSFSPSSSPP--PPPGDLPLS 227
>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)| (DEAH box protein 57) Length = 1388 Score = 36.6 bits (83), Expect = 0.061 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = +1 Query: 61 KFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 KF +++QK + +N ++T + E CK+Y G CKFG C++ H Sbjct: 284 KFCKSKQKESSKNVRDT-----SPETCKFY-LKGNCKFGSKCKFKH 323 Score = 30.4 bits (67), Expect = 4.3 Identities = 16/77 (20%), Positives = 35/77 (45%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQ 462 C +Y++ G+CKF + C+F H P + ++ ++ ++ A ++ Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEVPPH-----QMIGRAERNVNDPHLDADDDTTF-MYELQI 357 Query: 463 RALNEHRVPSLAPAPSY 513 R +H+ P AP ++ Sbjct: 358 RFSKDHKYPYQAPLVAF 374
>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)| Length = 482 Score = 36.6 bits (83), Expect = 0.061 Identities = 23/76 (30%), Positives = 30/76 (39%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G CK G++CRY H L P C Y+ R Sbjct: 56 TKQVTCRYFMH-GVCKEGDNCRYSH------------------DLSDSPYSVVCKYFQR- 95 Query: 304 GSCKFATNCRFHHPDP 351 G C + CR+ H P Sbjct: 96 GYCIYGDRCRYEHSKP 111 Score = 33.1 bits (74), Expect = 0.67 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 91 KENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 +E+ KE + T ++ C Y + G C++GE+C YLH Sbjct: 198 EESEKEQTAVETKKQLCPYAAV-GECRYGENCVYLH 232 Score = 29.6 bits (65), Expect = 7.4 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLHCEGKERKTE 225 E+K K+ E + + C+Y+ G C FG +C Y H R+ E Sbjct: 349 EEKEEKQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREE 399
>ZGPAT_HUMAN (Q8N5A5) Zinc finger CCCH-type with G patch domain protein (Zinc| finger CCCH-type domain-containing protein 9) Length = 531 Score = 36.6 bits (83), Expect = 0.061 Identities = 33/113 (29%), Positives = 53/113 (46%) Frame = +1 Query: 91 KENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRP 270 +E E GT + YYS+ G ++ + + +E + A V + +L P Sbjct: 121 EEGEDEEELSGT-KVSAPYYSSWGTLEYHNA---MVVGTEEAEDGSAGVRVLYL-YPTHK 175 Query: 271 GGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASS 429 K CP+++ G C+F NCRF H VVS D L ++ D+ ++QA S Sbjct: 176 SLKPCPFFLE-GKCRFKENCRFSH---GQVVSLDELRPFQDPDL--SSLQAGS 222
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING| finger protein 64) Length = 485 Score = 36.2 bits (82), Expect = 0.079 Identities = 24/76 (31%), Positives = 30/76 (39%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G CK G++CRY H L R G C Y+ R Sbjct: 91 TKQVTCRYFKY-GICKEGDNCRYSH------------------DLSDRLCGVVCKYFQR- 130 Query: 304 GSCKFATNCRFHHPDP 351 G C + CR H P Sbjct: 131 GCCVYGDRCRCEHSKP 146 Score = 35.0 bits (79), Expect = 0.18 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLHCEGKERKTE 225 E+K K+ + E + + CKY+ G C FGE+C Y H R+ E Sbjct: 384 EEKEEKQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREE 434 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +1 Query: 91 KENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 +E+ +E + T ++ C Y + G C++GE+C YLH Sbjct: 233 EESEEEQTAVETKKQLCPYAAV-GQCRYGENCVYLH 267
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 35.8 bits (81), Expect = 0.10 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = +1 Query: 28 ADEX*KGIYLKKFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A + KG +N A + ++TV A + CK Y G C FG+SC+++H Sbjct: 144 AKDTAKGNAASGYNRVGPVRAPQFLRQTVRWDFAPDICKDYKETGFCTFGDSCKFVH 200
>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)| (DEAH box protein 57) Length = 1386 Score = 35.8 bits (81), Expect = 0.10 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTN-VVSRDPLLEHENGDIPQQNVQASSQLNVPLWSAD 459 C +Y++ G+CKF + CRF H P N +V R +E D ++ +S L+ + Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVPPNQIVGR---IERSVDDSHLNAIEDASF----LYELE 356 Query: 460 QRALNEHRVPSLAPAPSY 513 R +H+ P AP ++ Sbjct: 357 IRFSKDHKYPYQAPLVAF 374 Score = 32.7 bits (73), Expect = 0.87 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 61 KFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 +F +++ K + +N +E + E CK+Y G CKFG CR+ H Sbjct: 284 RFRKSKPKESTKNVQEN-----SLEICKFY-LKGNCKFGSKCRFKH 323
>ZGPAT_MOUSE (Q8VDM1) Zinc finger CCCH-type with G patch domain protein| Length = 511 Score = 35.4 bits (80), Expect = 0.13 Identities = 27/92 (29%), Positives = 43/92 (46%) Frame = +1 Query: 127 AQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTG 306 A+ YYS G ++ + + +E + A V + +L P K CP+++ G Sbjct: 131 AKVNAPYYSAWGTLEYHNA---MVVGAEEAEDGSACVRVLYL-YPTHKSLKPCPFFLE-G 185 Query: 307 SCKFATNCRFHHPDPTNVVSRDPLLEHENGDI 402 C+F NCRF H VVS D L ++ D+ Sbjct: 186 KCRFKENCRFSH---GQVVSVDELRPFQDPDL 214
>CTH1_YEAST (P47976) Zinc finger protein CTH1| Length = 325 Score = 35.4 bits (80), Expect = 0.13 Identities = 20/76 (26%), Positives = 30/76 (39%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ ++ G CK+G C++ H EL F K C + + G C Sbjct: 208 ELCESFTIKGYCKYGNKCQFAH----------GLNELKFKKKSNNYRTKPCINWSKLGYC 257 Query: 313 KFATNCRFHHPDPTNV 360 + C F H D +V Sbjct: 258 PYGKRCCFKHGDDKDV 273
>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) Length = 324 Score = 35.0 bits (79), Expect = 0.18 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = +1 Query: 109 TVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTE---VAKVELNFLGLPLRPGGK 279 T S E C+ +S G C++G C++ H G+ R+ K EL Sbjct: 97 TTSSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTEL------------ 144 Query: 280 ECPYYMRTGSCKFATNCRFHH 342 C + G C + + C F H Sbjct: 145 -CHKFYLQGRCPYGSRCHFIH 164
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)| Length = 544 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLH 198 E++ KE + EG +Q+ C+Y++ G C FGE C Y H Sbjct: 415 EEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFYKH 456 Score = 29.6 bits (65), Expect = 7.4 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A+ + T Q C+YY G CK G++CRY H Sbjct: 81 ARSGPERNSGSWTKQILCRYY-LHGQCKEGDNCRYSH 116
>DUS3_YEAST (Q06053) tRNA-dihydrouridine synthase 3 (EC 1.-.-.-)| Length = 609 Score = 35.0 bits (79), Expect = 0.18 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = +1 Query: 166 CKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRF 336 C FG++CR++H T+ +VE N CP + G C CRF Sbjct: 109 CSFGDNCRFVHDINLYLSTKKPEVESNIF--------PSCPVFNSLGFCPMGFKCRF 157
>YTH1_YEAST (Q06102) Protein YTH1| Length = 208 Score = 34.3 bits (77), Expect = 0.30 Identities = 18/70 (25%), Positives = 30/70 (42%) Frame = +1 Query: 160 GGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFH 339 G CK + C YLH E N +P EC ++ + G C + +C++ Sbjct: 73 GLCKKNDQCEYLH-------------EYNLRKMP------ECVFFSKNGYCTQSPDCQYL 113 Query: 340 HPDPTNVVSR 369 H DP + + + Sbjct: 114 HIDPASKIPK 123 Score = 33.1 bits (74), Expect = 0.67 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Frame = +1 Query: 136 ECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGL----PLRPGGKE-CPYYMR 300 EC ++S G C C+YLH + + + E+ F L P R K C YM Sbjct: 94 ECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQRYM- 152 Query: 301 TGSCKFATN-CRFHHP 345 TG C + C HP Sbjct: 153 TGFCPLGKDECDMEHP 168
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 34.3 bits (77), Expect = 0.30 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A E+ + TV + CK Y G C FG+SC++LH Sbjct: 185 APEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLH 221
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 34.3 bits (77), Expect = 0.30 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A E+ + TV + CK Y G C FG+SC++LH Sbjct: 185 APEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLH 221
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III| Length = 547 Score = 34.3 bits (77), Expect = 0.30 Identities = 27/100 (27%), Positives = 36/100 (36%) Frame = +1 Query: 58 KKFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKV 237 K T K EN TV + CK++ G C GE+C + H ER Sbjct: 21 KSAKSTLPKNTPENGVSTV-KNLQHVPCKFFRN-GTCTAGENCPFSHSLETERPI----- 73 Query: 238 ELNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTN 357 C Y+++ G+CKF C H P N Sbjct: 74 ---------------CKYFLK-GNCKFGPKCALSHALPGN 97
>UNK_DROME (Q86B79) Protein unkempt| Length = 599 Score = 33.9 bits (76), Expect = 0.39 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +1 Query: 148 YSTPGGCKFGESCRYLHCEGKER-KTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFAT 324 + PG C+ G++C+Y H +++ E+ K +C + G C + Sbjct: 245 WGEPGNCEAGDNCQYCHTRTEQQFHPEIYK-------------STKCNDVQQAGYCPRSV 291 Query: 325 NCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALN 474 C F H +P ++ D P++N ++S N L + +N Sbjct: 292 FCAFAHVEPCSM------------DDPRENSLSASLANTSLLTRSSAPIN 329
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 33.9 bits (76), Expect = 0.39 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTE---VAKVELNFLGLPLRPGGKECPYYMRT 303 E C+ +S G C++G C++ H G+ R+ K EL C + Sbjct: 107 ELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTEL-------------CHKFYLQ 153 Query: 304 GSCKFATNCRFHH 342 G C + + C F H Sbjct: 154 GRCPYGSRCHFIH 166
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 33.9 bits (76), Expect = 0.39 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +1 Query: 58 KKFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERK 219 +K + E K N K T+ + CK + G C +G++C++LH + R+ Sbjct: 77 QKSKKGELKPLAANIKTTIITDFQPDVCKDFQQIGYCGYGDTCKFLHVRDESRQ 130
>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) (SP2) Length = 428 Score = 33.9 bits (76), Expect = 0.39 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTN 357 CP+Y +TG+C+F C H PT+ Sbjct: 163 CPFYNKTGACRFGNRCSRKHDFPTS 187
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 33.5 bits (75), Expect = 0.51 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTN 357 CP+Y +TG+C+F C H PT+ Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTS 196 Score = 30.0 bits (66), Expect = 5.7 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 67 NETEQKVAKENRKETVSEGTAQEE---CKYYSTPGGCKFGESCRYLH 198 NE E +N + V +++ C +YS G C+FG+ C H Sbjct: 145 NELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKH 191
>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) Length = 479 Score = 33.5 bits (75), Expect = 0.51 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTN 357 CP+Y +TG+C+F C H PT+ Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTS 201 Score = 29.6 bits (65), Expect = 7.4 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 67 NETEQKVAKENRKETVSEGTAQEE---CKYYSTPGGCKFGESCRYLH 198 N+ E +N + V +++ C +YS G C+FG+ C H Sbjct: 150 NDLENSTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKH 196
>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) Length = 462 Score = 33.5 bits (75), Expect = 0.51 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHPDPTN 357 CP+Y +TG+C+F C H PT+ Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTS 200
>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1| Length = 404 Score = 33.5 bits (75), Expect = 0.51 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGK--ECPYYMRTG 306 E CK + G C++G C++ H G + E P P K C +M G Sbjct: 330 EPCKNWQISGTCRYGSKCQFAH--GNQELKEP----------PRHPKYKSERCRSFMMYG 377 Query: 307 SCKFATNCRFHHPD 348 C + C F H + Sbjct: 378 YCPYGLRCCFLHDE 391
>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)| Length = 416 Score = 33.1 bits (74), Expect = 0.67 Identities = 19/77 (24%), Positives = 30/77 (38%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G C+ G C + H + + + C YY + Sbjct: 3 TKQITCRYFMH-GVCREGSQCLFSHDLANSKPSTI------------------CKYYQK- 42 Query: 304 GSCKFATNCRFHHPDPT 354 G C + T CR+ H P+ Sbjct: 43 GYCAYGTRCRYDHTRPS 59 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = +1 Query: 85 VAKENRK----ETVSEGTAQEECKYYST-PGGCKFGESCRYLHC--EGKERKTEVAKVEL 243 V +N+K E +G ++ CKY+ G C FG C Y H +G+ + E + +L Sbjct: 305 VEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQL 364 Query: 244 NFLG 255 + G Sbjct: 365 SSQG 368 Score = 30.0 bits (66), Expect = 5.7 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGGCKFGESCRYLHCE 204 E S + +++ Y+ G C+FG++C YLH E Sbjct: 159 EASSSYSNEQQLCPYAAAGECRFGDACVYLHGE 191
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 32.7 bits (73), Expect = 0.87 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +1 Query: 106 ETVSEGTAQEECKYYSTPGG-CKFGESCRYLHCEGKERKTEVAK 234 E G +++ CKY+ G C FG C Y+H R+ E K Sbjct: 315 EEFKSGVSKKACKYFDQGRGTCPFGGKCFYMHAYADGRRAEPDK 358 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/90 (25%), Positives = 34/90 (37%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G C+ G C + H + + + C YY R Sbjct: 3 TKQVTCRYF-LHGVCREGSRCLFSHDLTTSKPSTI------------------CKYYQR- 42 Query: 304 GSCKFATNCRFHHPDPTNVVSRDPLLEHEN 393 G+C + CR+ H P S P +H N Sbjct: 43 GACAYGDRCRYDHIKPPGRGSGAP-ADHSN 71
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 32.7 bits (73), Expect = 0.87 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 73 TEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 T+Q N + TV + CK Y G C +G+SC++LH Sbjct: 122 TKQINQPTNIRTTVLMDFQPDVCKDYKQTGYCGYGDSCKFLH 163
>HIS5_AZOSE (Q5P793) Imidazole glycerol phosphate synthase subunit hisH (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH) (ImGP synthase subunit hisH) (IGPS subunit hisH) Length = 212 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 10/48 (20%) Frame = -1 Query: 541 FPEVGSFPHCMRVLELK-----KEHGAHSMPF-----GQQTIMEHSAE 428 FP G+ P CMR L+L+ + A S PF GQQ + EHS E Sbjct: 47 FPGQGAMPDCMRELDLRGLREVVKTAAASKPFLGICIGQQMLFEHSEE 94
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 844 CRHFMMKGNCRYENNCAFYHP 864
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Frame = +1 Query: 52 YLKKFNETEQKVAKENRKETVSEGT----------AQEECKYYSTPGGCKFGESCRYLHC 201 YL N+T + + K+ + + + + CK Y G C +G+SC++LH Sbjct: 144 YLPTINKTRETLDKKMKSGPIKATSHVRTITLMDYQPDVCKDYKETGFCGYGDSCKFLHD 203 Query: 202 EG 207 G Sbjct: 204 RG 205
>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)| Length = 423 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLH 198 E + K++ + G +++ CKY+ G C FG C YLH Sbjct: 303 EDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLH 344 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/78 (23%), Positives = 30/78 (38%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G C+ G C + H + + + C +Y R Sbjct: 3 TKQVTCRYF-LHGVCREGSRCLFSHDLNNSKPSTI------------------CKFYQR- 42 Query: 304 GSCKFATNCRFHHPDPTN 357 G C + CR+ H P++ Sbjct: 43 GVCAYGERCRYDHIKPSS 60
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLH--------CEGKERKTEVAKVELNFLGLPLRPGGKECP 288 E C+ + G CK+GE C++ H + KTE+ + + +G CP Sbjct: 157 ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRT-FHTIGF--------CP 207 Query: 289 YYMRTGSCKFATNCRFHHPDPTNVVSRD 372 Y R C F N P P+ S D Sbjct: 208 YGPR---CHFIHNADERRPAPSGGASGD 232
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 912 CRHFMMKGNCRYENNCAFYHP 932
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 860 CRHFMMKGNCRYENNCAFYHP 880
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 912 CRHFMMKGNCRYENNCAFYHP 932
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 912 CRHFMMKGNCRYENNCAFYHP 932
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 897 CRHFMMKGNCRYENNCAFYHP 917
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 32.3 bits (72), Expect = 1.1 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 283 CPYYMRTGSCKFATNCRFHHP 345 C ++M G+C++ NC F+HP Sbjct: 791 CRHFMMKGNCRYENNCAFYHP 811
>MKRN3_HUMAN (Q13064) Makorin-3 (Zinc finger protein 127) (RING finger protein| 63) Length = 507 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLH-CEGKERKTE 225 T Q C+YY G CK GE+CRY H G++ TE Sbjct: 96 TKQIICRYY-IHGQCKEGENCRYSHDLSGRKMATE 129 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 + E ++ ++ G+ C YY++ G C GESC YLH Sbjct: 227 SSETERKQMAVGSGLRFC-YYASRGVCFRGESCMYLH 262 Score = 30.4 bits (67), Expect = 4.3 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTP-GGCKFGESCRYLH 198 E++ K+ + E + + C+Y++ G C FG++C Y H Sbjct: 379 EEEEEKQKLIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKH 420
>TIS1_DROME (P47980) Protein TIS11 (dTIS11)| Length = 436 Score = 32.0 bits (71), Expect = 1.5 Identities = 22/100 (22%), Positives = 36/100 (36%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ + G CK+GE C++ H EL + + + C + G C Sbjct: 139 ELCRPFEEAGECKYGEKCQFAH----------GSHELRNVHRHPKYKTEYCRTFHSVGFC 188 Query: 313 KFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQ 432 + C F H + + Q+ Q+SSQ Sbjct: 189 PYGPRCHFVHNADEARAQQAAQAAKSSTQSQSQSQQSSSQ 228
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24| Length = 405 Score = 32.0 bits (71), Expect = 1.5 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 88 AKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 A N + A + CK Y G C FG++C++LH Sbjct: 210 APSNIRTITITDMAPDVCKDYKQTGFCGFGDNCKFLH 246
>MKRN2_MOUSE (Q9ERV1) Makorin-2| Length = 416 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = +1 Query: 85 VAKENRK----ETVSEGTAQEECKYYST-PGGCKFGESCRYLHCEGKERKTEVAK 234 V +N+K E +G ++ CKY+ G C FG C Y H R E K Sbjct: 305 VEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEK 359 Score = 31.6 bits (70), Expect = 1.9 Identities = 18/76 (23%), Positives = 28/76 (36%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRT 303 T Q C+Y+ G C+ G C + H + + + C YY + Sbjct: 3 TKQVTCRYFMH-GVCREGSQCLFSHDLANSKPSTI------------------CKYYQK- 42 Query: 304 GSCKFATNCRFHHPDP 351 G C + CR+ H P Sbjct: 43 GYCAYGARCRYDHTKP 58
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 31.6 bits (70), Expect = 1.9 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLH 198 CK Y G C FG+SC++LH Sbjct: 196 CKDYKETGFCGFGDSCKFLH 215
>JPH1_HUMAN (Q9HDC5) Junctophilin-1 (Junctophilin type 1) (JP-1)| Length = 661 Score = 31.6 bits (70), Expect = 1.9 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 5/110 (4%) Frame = +1 Query: 268 PGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQ----QNVQASSQL 435 P KE P++ R G+ P P H P+ QN + ++L Sbjct: 447 PTPKESPHFYRKGTT------------PPRSPEASPKHSHSPASSPKPLKKQNPSSGARL 494 Query: 436 NVPLWS-ADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVP 582 N S AD++ P ++ AP+ AG + P S++SG H +P Sbjct: 495 NQDKRSVADEQVTAIVNKPLMSKAPTKEAGAV-----VPQSKYSGRHHIP 539
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/70 (25%), Positives = 27/70 (38%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ + G CK+GE C++ H EL L + + C + G C Sbjct: 130 ELCRPFEESGTCKYGEKCQFAH----------GFHELRSLTRHPKYKTELCRTFHTIGFC 179 Query: 313 KFATNCRFHH 342 + C F H Sbjct: 180 PYGPRCHFIH 189
>MTHFS_CAEEL (Q9XWE6) Putative 5-formyltetrahydrofolate cyclo-ligase (EC| 6.3.3.2) (5,10-methenyl-tetrahydrofolate synthetase) (Methenyl-THF synthetase) (MTHFS) Length = 206 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = +1 Query: 382 EHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEW 561 E + I Q+ ++ ++ +P ++ A++ RVP + + + R P +W Sbjct: 59 EIQTDSIIQKALEMGKEVFIPQFTKGSTAMDMVRVPDQTAFDNLPSTLWGIRQPEPKWKW 118 Query: 562 SGYHQV-PLGPYYTPGISF 615 YH+ PL PG++F Sbjct: 119 QSYHETGPLDLILAPGVAF 137
>ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing protein 8 (Fetal| liver zinc finger protein 1) Length = 305 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLHCE 204 +E CKYY G C GE+C YLH E Sbjct: 237 KEMCKYY-VQGYCTKGENCLYLHSE 260
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 31.2 bits (69), Expect = 2.5 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +1 Query: 97 NRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 N + T+ + CK + G C +G+SC++LH Sbjct: 99 NLRNTILTDFQPDVCKDFKQTGYCGYGDSCKFLH 132
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +1 Query: 124 TAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGG 276 TA+ +C+ + G C +G +CR++H K N+ P RP G Sbjct: 37 TAETQCRNWLKTGNCLYGNTCRFVHGPSPRGK----GYSSNYRRSPERPTG 83
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 30.8 bits (68), Expect = 3.3 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 Query: 127 AQEECKYYSTPGGCKFGESCRYLH 198 A + CK + G C FG+SC++LH Sbjct: 172 APDVCKDWKQTGFCGFGDSCKFLH 195
>BCA1_SCHPO (O14370) Branched-chain-amino-acid aminotransferase, mitochondrial| precursor (EC 2.6.1.42) (BCAT) Length = 380 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 332 DFTIRILLMWFHEIHCWSMRMVIFHNKMFKHPLS*MFHYG 451 +FT +L+M ++ WS ++ K+ HP S +FHYG Sbjct: 40 NFTDHMLIMKWNREKGWSTPEIVPFGKLCFHPASSVFHYG 79
>VATA_YEAST (P17255) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump A subunit) [Contains: Endonuclease PI-SceI (EC 3.1.-.-) (VMA1-derived endonuclease) (VDE) (Sce VMA intein)] Length = 1070 Score = 30.8 bits (68), Expect = 3.3 Identities = 22/88 (25%), Positives = 30/88 (34%) Frame = +1 Query: 253 GLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQ 432 G P G K +Y R G PD T VS + GD A+ Sbjct: 833 GFPAYLGAKLASFYERAGKA-----VALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLG 887 Query: 433 LNVPLWSADQRALNEHRVPSLAPAPSYS 516 + W D++ PS+ + SYS Sbjct: 888 ITQVFWGLDKKLAQRKHFPSINTSVSYS 915
>UVRC_XANC8 (Q4UV60) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 618 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -1 Query: 514 CMRVLELKKEHGAHSMPFGQQTIMEHSAERMLEHFVVEYHHSHAPTMDLV 365 C+ +L + + F +T E SAE +L FV +Y+ HAP +++ Sbjct: 268 CVLLLSFRDGRNLGTRSFFPKTNGEDSAEEILAAFVSQYYAEHAPPREIL 317
>UL47_EHV1V (Q6S6Q8) 97 kDa alpha trans-inducing protein (Tegument protein)| (GP10) Length = 871 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 364 SRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGM 543 SRDP + N D +++Q + W +R ++ VP+ AP A PP G Sbjct: 54 SRDPQEQASNQDESSNPSTSNAQQSTSFWGYLRRVFSDD-VPAQPQAPRPRADFAPPAGE 112 Query: 544 YPSSE 558 SSE Sbjct: 113 ESSSE 117
>UL47_EHV1B (P28929) 97 kDa alpha trans-inducing protein (Tegument protein)| (GP10) Length = 871 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 364 SRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGM 543 SRDP + N D +++Q + W +R ++ VP+ AP A PP G Sbjct: 54 SRDPQEQASNQDESSNPSTSNAQQSTSFWGYLRRVFSDD-VPAQPQAPRPRADFAPPAGE 112 Query: 544 YPSSE 558 SSE Sbjct: 113 ESSSE 117
>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +1 Query: 148 YSTPGGCKFGESCRYLHCEGKER-KTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFAT 324 + PG C+ G++C+Y H +++ E+ K +C + GSC Sbjct: 266 WGDPGKCENGDACQYCHTRTEQQFHPEIYK-------------STKCNDMQQAGSCPRGP 312 Query: 325 NCRFHHPDP 351 C F H +P Sbjct: 313 FCAFAHIEP 321
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 30.4 bits (67), Expect = 4.3 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 Query: 127 AQEECKYYSTPGGCKFGESCRYLH 198 A + CK Y G C FG+SC++ H Sbjct: 164 APDVCKDYKLTGYCGFGDSCKFSH 187
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 30.4 bits (67), Expect = 4.3 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLH 198 CK Y G C FG++C++LH Sbjct: 203 CKDYKETGYCGFGDTCKFLH 222
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 30.4 bits (67), Expect = 4.3 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 Query: 82 KVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLH 198 K +N K + CK + G C +G+SC++LH Sbjct: 97 KPVSKNMKTVTITDYQPDICKDFQKTGYCGYGDSCKFLH 135
>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible| protein CMG1) Length = 338 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/70 (24%), Positives = 27/70 (38%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ + G CK+G+ C++ H EL L + + C + G C Sbjct: 118 ELCRPFEENGACKYGDKCQFAH----------GIHELRSLTRHPKYKTELCRTFHTIGFC 167 Query: 313 KFATNCRFHH 342 + C F H Sbjct: 168 PYGPRCHFIH 177
>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)| Length = 338 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/70 (24%), Positives = 27/70 (38%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ + G CK+G+ C++ H EL L + + C + G C Sbjct: 118 ELCRPFEENGACKYGDKCQFAH----------GIHELRSLTRHPKYKTELCRTFHTIGFC 167 Query: 313 KFATNCRFHH 342 + C F H Sbjct: 168 PYGPRCHFIH 177
>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response| factor 1) (ERF-1) Length = 338 Score = 30.4 bits (67), Expect = 4.3 Identities = 17/70 (24%), Positives = 27/70 (38%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGSC 312 E C+ + G CK+G+ C++ H EL L + + C + G C Sbjct: 118 ELCRPFEENGACKYGDKCQFAH----------GIHELRSLTRHPKYKTELCRTFHTIGFC 167 Query: 313 KFATNCRFHH 342 + C F H Sbjct: 168 PYGPRCHFIH 177
>YTY1_YEAST (P08405) Transposon Ty1-15 52 kDa hypothetical protein| Length = 440 Score = 30.4 bits (67), Expect = 4.3 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Frame = +1 Query: 337 HHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAP-APSY 513 HH P S P +NG PQQ + +Q N WS + PS+ P P Sbjct: 68 HHASPQTAQSHSP----QNGPYPQQCMMTQNQANPSGWSF-------YGHPSMIPYTPYQ 116 Query: 514 SAGMIPPRGMYPSSEWSGYHQVPLGPYYTP 603 + M P G P S++ Y P TP Sbjct: 117 MSPMYFPPG--PQSQFPQYPSSVGTPLRTP 144
>YJZ8_YEAST (P47099) Transposon Ty1 protein A| Length = 440 Score = 30.4 bits (67), Expect = 4.3 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Frame = +1 Query: 337 HHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAP-APSY 513 HH P S P +NG PQQ + +Q N WS + PS+ P P Sbjct: 68 HHASPQTAQSHSP----QNGPYPQQCMMTQNQANPSGWSF-------YGHPSMIPYTPYQ 116 Query: 514 SAGMIPPRGMYPSSEWSGYHQVPLGPYYTP 603 + M P G P S++ Y P TP Sbjct: 117 MSPMYFPPG--PQSQFPQYPSSVGTPLSTP 144
>MEX6_CAEEL (Q09436) Zinc finger protein mex-6| Length = 467 Score = 30.4 bits (67), Expect = 4.3 Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 10/99 (10%) Frame = +1 Query: 166 CKFGESCRYLHCEGKERKTEVAKVELNFLGLPLR-PGGKE----CPYYMRTGS--CKFAT 324 C G C++ H EL +P R P K C + R GS C + Sbjct: 289 CALGARCKFAH----------GLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGL 338 Query: 325 NCRFHHPDPT---NVVSRDPLLEHENGDIPQQNVQASSQ 432 C F HP T N+ + E+ IP+ V A Q Sbjct: 339 RCEFVHPSDTEFQNIPPYQRKMVEEHDSIPEDYVVARYQ 377
>YJZ9_YEAST (P47100) Transposon Ty1 protein B| Length = 1755 Score = 30.4 bits (67), Expect = 4.3 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Frame = +1 Query: 337 HHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAP-APSY 513 HH P S P +NG PQQ + +Q N WS + PS+ P P Sbjct: 68 HHASPQTAQSHSP----QNGPYPQQCMMTQNQANPSGWSF-------YGHPSMIPYTPYQ 116 Query: 514 SAGMIPPRGMYPSSEWSGYHQVPLGPYYTP 603 + M P G P S++ Y P TP Sbjct: 117 MSPMYFPPG--PQSQFPQYPSSVGTPLSTP 144
>ZC11A_PONPY (Q5REG6) Zinc finger CCCH-type domain-containing protein 11A| Length = 811 Score = 30.0 bits (66), Expect = 5.7 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Frame = +1 Query: 133 EECKYYSTPGGCKFGESCRYLHCE---GKE------RKTEVAKVELNFLGLPLRPGGKEC 285 E+C ++ C G+SC + HCE G E ++ + F + + E Sbjct: 6 EDCYFFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEI 65 Query: 286 PYYMR---TGSCKFATNCRFHH 342 P Y TG K NC FHH Sbjct: 66 PCYWENQPTGCQKL--NCAFHH 85
>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3| Length = 950 Score = 30.0 bits (66), Expect = 5.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLH 198 +E C YY+ G C GE C Y+H Sbjct: 665 REYCMYYNRFGRCNRGECCPYIH 687
>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3| Length = 948 Score = 30.0 bits (66), Expect = 5.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 130 QEECKYYSTPGGCKFGESCRYLH 198 +E C YY+ G C GE C Y+H Sbjct: 670 KEYCMYYNRFGRCNRGERCPYIH 692
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 30.0 bits (66), Expect = 5.7 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLH 198 CK Y G C +G+SC++LH Sbjct: 107 CKDYRQTGFCGYGDSCKFLH 126
>SUS_DROME (P22293) Protein suppressor of sable| Length = 1325 Score = 30.0 bits (66), Expect = 5.7 Identities = 25/104 (24%), Positives = 37/104 (35%) Frame = +1 Query: 76 EQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLG 255 ++K+ NR E E CK+Y C + C Y+H E Sbjct: 319 QEKMGGSNRVEP----RKLELCKFYLMDC-CAKRDKCSYMHKEFP--------------- 358 Query: 256 LPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEH 387 C YY C +C F+H +P + R+ LL+H Sbjct: 359 ---------CKYYYLGMDCYAGDDCLFYHGEPLSEQLRNVLLKH 393
>ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing protein 8| Length = 291 Score = 30.0 bits (66), Expect = 5.7 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 9/103 (8%) Frame = +1 Query: 61 KFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVE 240 K E +Q +++ + E ++ CKY+ C G+ C++ H E+K E+ K Sbjct: 171 KPKEKQQHLSQAFINQHTVERKGKQICKYF-LERKCIKGDQCKFDHDAEIEKKKEMCKFY 229 Query: 241 LNFLGLPLRPGGKECPYYMRTGSCKF---------ATNCRFHH 342 + G R G+ C Y CKF C+F H Sbjct: 230 VQ--GYCTR--GENCLYLHNEYPCKFYHTGTKCYQGEYCKFSH 268
>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 765 Score = 29.6 bits (65), Expect = 7.4 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Frame = +1 Query: 346 DPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGM 525 D T+ + PLL G Q + S L PL + + +++E VP+ P++ + Sbjct: 569 DTTSKAHQHPLLPDAPGIRTQAPQLSVSALQPPLPTNSRSSVHETPVPAANQPPAFPSSP 628 Query: 526 IPPRGMYPSSEWS------GYHQVPLGP 591 +PP+ P+++ S Y + PL P Sbjct: 629 LPPQ--RPTNQTSSISPTHSYSRAPLVP 654
>PIE1_CAEEL (Q94131) Pharynx and intestine in excess protein 1 (Protein pie-1)| Length = 335 Score = 29.6 bits (65), Expect = 7.4 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = +1 Query: 55 LKKFNETEQKVAKENRKETVSEGTAQEE--CKYYSTPGGCKFGESCRYLHCEGKERKTEV 228 + + + + K ENR+ + + G++ C + G C++G CR++H E + Sbjct: 160 INRSSSSASKHHDENRRPSNNHGSSNRRQICHNFER-GNCRYGPRCRFIHVEQMQHFNAN 218 Query: 229 AKVELNFLGLPLRPGGKECP 288 A V P +CP Sbjct: 219 ATV--------YAPPSSDCP 230
>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog| Length = 242 Score = 29.6 bits (65), Expect = 7.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +1 Query: 484 VPSLAPAPSYSAGMIP----PRGMYPSSEWSGYHQVPLGPYYTPGIS 612 +PS P S + +P P GMYPS +G P GP+ PG S Sbjct: 49 MPSGLPPSSAAPSTVPFGPVPTGMYPSMPPTGPPPGPPGPFPPPGPS 95
>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 29.3 bits (64), Expect = 9.7 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 1/125 (0%) Frame = +1 Query: 148 YSTPGGCKFGESCRYLHCEGKER-KTEVAKVELNFLGLPLRPGGKECPYYMRTGSCKFAT 324 + PG C+ G++C+Y H +++ E+ K +C ++GSC Sbjct: 266 WGDPGKCENGDACQYCHTRTEQQFHPEIYK-------------STKCNDMQQSGSCPRGP 312 Query: 325 NCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPA 504 C F H V + PL + P V + +Q L+ + PS A Sbjct: 313 FCAFAH------VEQPPLSDDLQ---PSSAVSSPTQPGPVLYMPSAAGDSVPVSPSSPHA 363 Query: 505 PSYSA 519 P SA Sbjct: 364 PDLSA 368
>YMT6_YEAST (Q04215) Transposon Ty1 protein A| Length = 440 Score = 29.3 bits (64), Expect = 9.7 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +1 Query: 337 HHPDPTNVVSRDPLLEHENGDIPQQNVQASSQLNVPLWSADQRALNEHRVPSLAPAPSYS 516 HH P ++ PL +NG PQQ + + Q N+ W + PSL P P Y Sbjct: 68 HHASPQ--AAQVPL--PQNGPYPQQRMMNTQQANISGWPV-------YGHPSLMPYPPYQ 116 Query: 517 -AGMIPPRGMYPSSEWSGYHQ 576 + M P G S+++ Y Q Sbjct: 117 MSPMYAPPG--AQSQFTQYPQ 135
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 29.3 bits (64), Expect = 9.7 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +1 Query: 139 CKYYSTPGGCKFGESCRYLH 198 CK Y G C +G++C++LH Sbjct: 190 CKDYKLTGYCGYGDTCKFLH 209 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,972,606 Number of Sequences: 219361 Number of extensions: 2128350 Number of successful extensions: 6395 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 5815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6265 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
