ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags20m24 |
|---|---|
| Clone Library Name | barley_pub |
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 266 bits (681), Expect(2) = 3e-74 Identities = 130/150 (86%), Positives = 143/150 (95%) Frame = +2 Query: 56 KALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYIS 235 KALKEAFE+FCNK V+GSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVV+LLAYIS Sbjct: 365 KALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYIS 424 Query: 236 DKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDH 415 DKDLFAEFYRKKLARRLLFD+SAND+HERSILTKLKQQCGGQFTSKMEGMVTDLT+AR++ Sbjct: 425 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 484 Query: 416 QTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 Q FE+++ ++P NPGIDL VTVLTTGFW Sbjct: 485 QNSFEDYLGSNPAANPGIDLTVTVLTTGFW 514 Score = 31.6 bits (70), Expect(2) = 3e-74 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 3 DKYVAYVTDCFQGHT 47 DKY+ YVT+CFQ HT Sbjct: 347 DKYMVYVTECFQNHT 361
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 121 bits (303), Expect = 1e-27 Identities = 64/148 (43%), Positives = 96/148 (64%) Frame = +2 Query: 62 LKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDK 241 +KE+FE F NK + AEL+A D+ L+ G E +DE +E TL+K++ L +I K Sbjct: 290 MKESFETFINK--RPNKPAELIAKHVDSKLRAGNKEA-TDEELERTLDKIMILFRFIHGK 346 Query: 242 DLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQT 421 D+F FY+K LA+RLL KSA+ + E+S+L+KLK +CG FTSK+EGM D+ +++D Sbjct: 347 DVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMV 406 Query: 422 KFEEFISTHPELNPGIDLAVTVLTTGFW 505 F++ + + P IDL V +LT G+W Sbjct: 407 HFKQHMQNQSDSGP-IDLTVNILTMGYW 433
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 119 bits (298), Expect = 5e-27 Identities = 62/149 (41%), Positives = 99/149 (66%) Frame = +2 Query: 59 ALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISD 238 A+KEAFE F NK + AEL+A + D+ L+ G E +DE +E L+K++ + +I Sbjct: 525 AMKEAFETFINK--RPNKPAELIAKYVDSKLRAGNKEA-TDEELEKMLDKIMIIFRFIYG 581 Query: 239 KDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQ 418 KD+F FY+K LA+RLL KSA+ + E+S+L+KLK +CG FTSK+EGM D+ +++D Sbjct: 582 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIM 641 Query: 419 TKFEEFISTHPELNPGIDLAVTVLTTGFW 505 +F++++ + + I+L V +LT G+W Sbjct: 642 IQFKQYMQ-NQNVPGNIELTVNILTMGYW 669
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 113 bits (282), Expect = 3e-25 Identities = 58/144 (40%), Positives = 93/144 (64%) Frame = +2 Query: 74 FEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFA 253 FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F Sbjct: 374 FEYFLNLN---SRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMVLFRFMQEKDVFE 429 Query: 254 EFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEE 433 +Y++ LARRLL +KS +D+ E+++++KLK +CG QFTSK+EGM D++++ +F + Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489 Query: 434 FISTHPELNPGIDLAVTVLTTGFW 505 + G+DL V VLTTG+W Sbjct: 490 HLQATGVSLGGVDLTVRVLTTGYW 513
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 113 bits (282), Expect = 3e-25 Identities = 58/144 (40%), Positives = 93/144 (64%) Frame = +2 Query: 74 FEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFA 253 FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F Sbjct: 374 FEYFLNLN---SRSPEYLSLFIDDKLKKG-VKGLTEQEVETILDKAMVLFRFMQEKDVFE 429 Query: 254 EFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEE 433 +Y++ LARRLL +KS +D+ E+++++KLK +CG QFTSK+EGM D++++ +F + Sbjct: 430 RYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQ 489 Query: 434 FISTHPELNPGIDLAVTVLTTGFW 505 + G+DL V VLTTG+W Sbjct: 490 HLQATGVSLGGVDLTVRVLTTGYW 513
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 112 bits (280), Expect = 6e-25 Identities = 59/136 (43%), Positives = 94/136 (69%), Gaps = 1/136 (0%) Frame = +2 Query: 101 SGSSSAELLATFCDNILKKGGSEKLSDEA-IEDTLEKVVRLLAYISDKDLFAEFYRKKLA 277 S S S ELLA +CD++LKK S K +EA +EDTL +V+ + YI DKD+F +FY K LA Sbjct: 414 SSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLA 471 Query: 278 RRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPEL 457 +RL+ SA+D+ E S+++KLKQ CG ++TSK++ M D+ V++D +F++ ++ L Sbjct: 472 KRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL 531 Query: 458 NPGIDLAVTVLTTGFW 505 + +D ++ VL++G W Sbjct: 532 D--LDFSIQVLSSGSW 545
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 112 bits (280), Expect = 6e-25 Identities = 59/136 (43%), Positives = 94/136 (69%), Gaps = 1/136 (0%) Frame = +2 Query: 101 SGSSSAELLATFCDNILKKGGSEKLSDEA-IEDTLEKVVRLLAYISDKDLFAEFYRKKLA 277 S S S ELLA +CD++LKK S K +EA +EDTL +V+ + YI DKD+F +FY K LA Sbjct: 414 SSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLA 471 Query: 278 RRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPEL 457 +RL+ SA+D+ E S+++KLKQ CG ++TSK++ M D+ V++D +F++ ++ L Sbjct: 472 KRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL 531 Query: 458 NPGIDLAVTVLTTGFW 505 + +D ++ VL++G W Sbjct: 532 D--LDFSIQVLSSGSW 545
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 112 bits (280), Expect = 6e-25 Identities = 59/136 (43%), Positives = 94/136 (69%), Gaps = 1/136 (0%) Frame = +2 Query: 101 SGSSSAELLATFCDNILKKGGSEKLSDEA-IEDTLEKVVRLLAYISDKDLFAEFYRKKLA 277 S S S ELLA +CD++LKK S K +EA +EDTL +V+ + YI DKD+F +FY K LA Sbjct: 414 SSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLA 471 Query: 278 RRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPEL 457 +RL+ SA+D+ E S+++KLKQ CG ++TSK++ M D+ V++D +F++ ++ L Sbjct: 472 KRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL 531 Query: 458 NPGIDLAVTVLTTGFW 505 + +D ++ VL++G W Sbjct: 532 D--LDFSIQVLSSGSW 545
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 107 bits (266), Expect = 2e-23 Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 5/154 (3%) Frame = +2 Query: 59 ALKEAFEVFCNKGV-----SGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLL 223 AL +A F N V S S S ELLA +CD +LKK S+ D+ +ED L +V+ + Sbjct: 394 ALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKS-SKNPEDKELEDNLNQVMVVF 452 Query: 224 AYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTV 403 YI DKD+F ++Y K LA+RL+ SA+D+ E +++KLKQ CG ++T K++ M D+ V Sbjct: 453 KYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGV 512 Query: 404 ARDHQTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 ++D + F+++++ L ID + VL++G W Sbjct: 513 SKDLNSYFKQYLA-EKNLTMEIDFGIEVLSSGSW 545
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 103 bits (257), Expect = 3e-22 Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%) Frame = +2 Query: 119 ELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDK 298 ELLA +CDN+LKK ++ +++ +ED L + + YI DKD+F +FY + LA+RL+ Sbjct: 389 ELLAKYCDNLLKKS-AKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGL 447 Query: 299 SANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPE-LNPGIDL 475 S + + E +++ KLKQ CG +FTSK+ M TD++V+ D KF FI ++ GI Sbjct: 448 SMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISF 507 Query: 476 AVTVLTTGFW 505 + VL G W Sbjct: 508 QIYVLQAGAW 517
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 103 bits (257), Expect = 3e-22 Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%) Frame = +2 Query: 119 ELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDK 298 ELLA +CDN+LKK ++ +++ +ED L + + YI DKD+F +FY + LA+RL+ Sbjct: 389 ELLAKYCDNLLKKS-AKGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGL 447 Query: 299 SANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPE-LNPGIDL 475 S + + E +++ KLKQ CG +FTSK+ M TD++V+ D KF FI ++ GI Sbjct: 448 SMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISF 507 Query: 476 AVTVLTTGFW 505 + VL G W Sbjct: 508 QIYVLQAGAW 517
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 103 bits (256), Expect = 3e-22 Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%) Frame = +2 Query: 119 ELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDK 298 ELLA +CDN+LKK ++ +++ +ED L + + YI DKD+F +FY + LA+RL+ Sbjct: 389 ELLAKYCDNLLKKS-AKGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGL 447 Query: 299 SANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPE-LNPGIDL 475 S + + E +++ KLKQ CG +FTSK+ M TD++V+ D KF FI ++ GI Sbjct: 448 SMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGISF 507 Query: 476 AVTVLTTGFW 505 + VL G W Sbjct: 508 QIYVLQAGAW 517
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 98.2 bits (243), Expect = 1e-20 Identities = 53/144 (36%), Positives = 87/144 (60%) Frame = +2 Query: 74 FEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFA 253 FE F N S S E +A + D++L+ G + +SD +++ L+ V+ L Y+ +KD+F Sbjct: 380 FETFLN---SNRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMILFRYLQEKDVFE 435 Query: 254 EFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEE 433 +++++ LA+RLL DKS +D+ E+++L KLK +CG QFT K+E M D + T F + Sbjct: 436 KYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRD 495 Query: 434 FISTHPELNPGIDLAVTVLTTGFW 505 + P ID+++ VLT G W Sbjct: 496 WREAQP-TKMSIDISLRVLTAGVW 518
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 98.2 bits (243), Expect = 1e-20 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 5/163 (3%) Frame = +2 Query: 32 FPGAYSLPKALKEAFEVFCNKGV----SGSSSAELLATFCDNILKKGGSEKLSDEAIEDT 199 F G K+L AF N+ V S S S ELLA + D+IL+K D+ +ED Sbjct: 382 FHGDTDFTKSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDD-VEDC 440 Query: 200 LEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKME 379 L ++ + Y+ DKD+F FY K LA+RL+ S + + E S+L+KLK+ CG ++TSK++ Sbjct: 441 LSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQ 500 Query: 380 GMVTDLTVARDHQTKFEEFISTHPELNPG-IDLAVTVLTTGFW 505 M D++++++ F + P+ G ID + VL T FW Sbjct: 501 RMFQDISLSQEITEAFWQL----PQSRAGNIDFSALVLGTSFW 539
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 96.7 bits (239), Expect = 3e-20 Identities = 52/134 (38%), Positives = 84/134 (62%), Gaps = 1/134 (0%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGGSEKLSDEA-IEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 + SAELLA +CD +L+K S K+ DEA +E+ K++ + YI DKD+F++FY K ++R Sbjct: 420 TKSAELLARYCDQLLRK--SSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKR 477 Query: 284 LLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELNP 463 L+ + SA+DE E + +TKLK CG ++T+++ MV D V++D F+E Sbjct: 478 LISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKE-KKADMLGQK 536 Query: 464 GIDLAVTVLTTGFW 505 ++ V VL++G W Sbjct: 537 SVEFNVLVLSSGSW 550
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 95.9 bits (237), Expect = 6e-20 Identities = 51/155 (32%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Frame = +2 Query: 47 SLPKALKEAFEVFCN--KGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRL 220 +L A+++AFE F N KG + A L+A + D +L+ G + + +++ +++ L Sbjct: 355 TLSYAMRKAFETFINGAKGSQREAPARLIAKYIDYLLRVG-EQASGGKPLKEVFSEILDL 413 Query: 221 LAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLT 400 YI+ KD+F +Y+ +A+RLL +KSA+ ++E +L LK+ CG QFT +EGM D+ Sbjct: 414 FRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVN 473 Query: 401 VARDHQTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 ++++ + F + H N DL V VL+ +W Sbjct: 474 ISKEFTSSFRHSKAAH---NLHRDLYVNVLSQAYW 505
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 90.1 bits (222), Expect = 3e-18 Identities = 53/154 (34%), Positives = 93/154 (60%), Gaps = 1/154 (0%) Frame = +2 Query: 47 SLPKALKEAFEVFCNKGVSGSSSA-ELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLL 223 S+ +L +AF F V G + A E ++ F D+ LKK + K + +IE TL+ V L Sbjct: 402 SILNSLSDAFVTF----VDGYTRAPEYISLFIDDNLKKD-ARKAIEGSIEATLQNSVTLF 456 Query: 224 AYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTV 403 +IS+KD+F ++Y+ LA+RLL ++S + + E ++++LKQ+ G FT K+EGM D+ + Sbjct: 457 RFISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNL 516 Query: 404 ARDHQTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 +++ +++ S P +DL V++L + FW Sbjct: 517 SQELLQEYKH-NSALQSAKPALDLNVSILASTFW 549
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 87.8 bits (216), Expect = 2e-17 Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 3/140 (2%) Frame = +2 Query: 95 GVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKL 274 G S ++E LA + D +LKK ++ LS+ +E L+ + + YI DKD+F +FY K L Sbjct: 398 GQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKML 456 Query: 275 ARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPE 454 A RL+ S + + E ++ KLKQ CG +FTSK+ M TD+ ++++ F++ I+ Sbjct: 457 ANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKT 516 Query: 455 LNPGIDLAVT---VLTTGFW 505 + P + T +L G W Sbjct: 517 VQPDVKFVPTQTMILQAGSW 536
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 85.5 bits (210), Expect = 8e-17 Identities = 45/150 (30%), Positives = 80/150 (53%) Frame = +2 Query: 56 KALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYIS 235 + L +AFE F NK V SAEL++ +L D ++ +++ + L Y+ Sbjct: 458 QCLSDAFESFVNKQVD--RSAELISKHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLR 515 Query: 236 DKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDH 415 KD+F +Y++ LA+RL ++SA+ + E+ +L KLK +CG FT K+EGM D+ + ++ Sbjct: 516 GKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENY 575 Query: 416 QTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 F +++ H + V+T +W Sbjct: 576 GRLFNQYLE-HMNKEKA-NFTARVITPEYW 603
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 81.3 bits (199), Expect = 1e-15 Identities = 47/137 (34%), Positives = 84/137 (61%), Gaps = 4/137 (2%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S AELLA +CD +L+K S+KL+ E I++ L +V+ +L Y+ +KD+F F+R L+RR Sbjct: 382 SKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRR 441 Query: 284 LLFDKSANDEHERSILTKLKQQCG--GQFTSKMEGMVTDLTVARDHQTKFEEFIS-THPE 454 L+ + SA+ E E ++TKL+ +CG +K+ M+ D+ + +D + F++ ++ T+ Sbjct: 442 LILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNN 500 Query: 455 LNPGIDLAVTVLTTGFW 505 + + + VL G W Sbjct: 501 KSIADSINMKVLNGGAW 517
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 78.2 bits (191), Expect = 1e-14 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Frame = +2 Query: 47 SLPKALKEAFE-----VFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKV 211 SL KA K+ E + + + SA+ LA +CD +LKK + K+ DE L+K Sbjct: 351 SLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKK--NSKVQDET---ALDKA 405 Query: 212 VRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVT 391 + +L YIS+KD+F +Y+ + R++ + SA+D+ E +T L G ++T + MV Sbjct: 406 LTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVE 465 Query: 392 DLTVARDHQTKFEEFISTHPELNPGIDLAVTVLTTGFW 505 D +++D T+F++ + ID V + TTG W Sbjct: 466 DAKISKDLTTEFKDI-----KTEKSIDFNVILQTTGAW 498
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 75.9 bits (185), Expect = 6e-14 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S ELLA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RR Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461 Query: 284 LLFDKSANDEHERSILTKLKQ-QCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELN 460 L+ D SA+ E E +++ L++ + +K+ M D+ V+ D F+E + Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLAL 521 Query: 461 PGIDLAVTVLTTGFW 505 P + + +L G W Sbjct: 522 PADSVNIKILNAGAW 536
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 75.9 bits (185), Expect = 6e-14 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S ELLA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RR Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461 Query: 284 LLFDKSANDEHERSILTKLKQ-QCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELN 460 L+ D SA+ E E +++ L++ + +K+ M D+ V+ D F+E + Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLAL 521 Query: 461 PGIDLAVTVLTTGFW 505 P + + +L G W Sbjct: 522 PADSVNIKILNAGAW 536
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 75.9 bits (185), Expect = 6e-14 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S ELLA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RR Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461 Query: 284 LLFDKSANDEHERSILTKLKQ-QCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELN 460 L+ D SA+ E E +++ L++ + +K+ M D+ V+ D F+E + Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLAL 521 Query: 461 PGIDLAVTVLTTGFW 505 P + + +L G W Sbjct: 522 PADSVNIKILNAGAW 536
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 75.9 bits (185), Expect = 6e-14 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S ELLA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RR Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461 Query: 284 LLFDKSANDEHERSILTKLKQ-QCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELN 460 L+ D SA+ E E +++ L++ + +K+ M D+ V+ D F+E + Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLAL 521 Query: 461 PGIDLAVTVLTTGFW 505 P + + +L G W Sbjct: 522 PADSVNIKILNAGAW 536
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 75.5 bits (184), Expect = 8e-14 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = +2 Query: 107 SSSAELLATFCDNILKKGG-SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARR 283 S ELLA +CD +L+K S+KL+ E IE L++V+ +L Y+ +KD+F +++ L RR Sbjct: 402 SKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRR 461 Query: 284 LLFDKSANDEHERSILTKLKQ-QCGGQFTSKMEGMVTDLTVARDHQTKFEEFISTHPELN 460 L+ D SA+ E E +++ L++ + +K+ M D+ V+ D F+E + Sbjct: 462 LILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLAL 521 Query: 461 PGIDLAVTVLTTGFW 505 P + + +L G W Sbjct: 522 PADSVNIKILNAGAW 536
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 64.7 bits (156), Expect = 1e-10 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Frame = +2 Query: 32 FPGAYSLPKALKEAFEVFCNKGV----------SGSSSAELLATFCDNILKKGGSEKLSD 181 FP L KAL A F N + S ++E+LA + D +LKK +++ Sbjct: 398 FPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVAS 457 Query: 182 EAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQ 361 + + E ++ + Y++DKD F YR+ A+RL+ S + E E +I+ +L+ + Sbjct: 458 DMSD---EDIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAANSME 514 Query: 362 FTSKMEGMVTDLTVARDHQTKFEEFISTHPELNPG--IDLAVTVLTTGFW 505 +T K+ M D+ +++ + F + P+ + DL VL W Sbjct: 515 YTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMW 564
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 60.8 bits (146), Expect = 2e-09 Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Frame = +2 Query: 62 LKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDK 241 L + F ++ +K G+ +E L+T+ D+ +K+ + I+ L +L+ +++K Sbjct: 369 LGDVFSMYFSK--EGALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEK 426 Query: 242 DLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQT 421 D+F + Y+K+L+RRLL +S E E+ ++ +K+ G FTSK+E M+ D++++ + Sbjct: 427 DIFEKIYKKQLSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQ 485 Query: 422 KFEEFISTHPELN--PGIDLAVTVLTTGFW 505 F+ H +N + A VLT W Sbjct: 486 AFQ-----HSTINSIEYLSFAPQVLTRTSW 510
>ANC2_HUMAN (Q9UJX6) Anaphase-promoting complex subunit 2 (APC2) (Cyclosome| subunit 2) Length = 822 Score = 36.6 bits (83), Expect = 0.040 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = +2 Query: 218 LLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDL 397 L++ KDLF YR LA RLL S + E E + LK + G E M+ D+ Sbjct: 505 LVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVMLKDM 564 Query: 398 TVARDHQTKFEEFISTHP-ELNPGIDLAVTVLTTGFW 505 +R E P E P + +L++ FW Sbjct: 565 ADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFW 601
>ANC2_MOUSE (Q8BZQ7) Anaphase-promoting complex subunit 2 (APC2) (Cyclosome| subunit 2) Length = 837 Score = 36.6 bits (83), Expect = 0.040 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = +2 Query: 218 LLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDL 397 L++ KDLF YR LA RLL S + E E + LK + G E M+ D+ Sbjct: 520 LVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVMLKDM 579 Query: 398 TVARDHQTKFEEFISTHP-ELNPGIDLAVTVLTTGFW 505 +R E P E P + +L++ FW Sbjct: 580 ADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFW 616
>ANC2_CAEEL (P34514) Anaphase-promoting complex subunit 2 (APC2) (Cyclosome| subunit 2) Length = 728 Score = 35.4 bits (80), Expect = 0.089 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Frame = +2 Query: 218 LLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDL 397 L++ K+LF + YR LA RL + + E E+ L LK + E M+ D+ Sbjct: 402 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 461 Query: 398 TVARDHQTKFEEFISTHPELN---PGIDLAVTVLTTGFW 505 + D KFE+ +S N P I ++ ++++ +W Sbjct: 462 IHSLDIDKKFED-MSERSAGNYDVPIIPISACIISSHYW 499
>MATK_NEPAL (Q95GT2) Maturase K (Intron maturase)| Length = 504 Score = 33.9 bits (76), Expect = 0.26 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 4/139 (2%) Frame = +2 Query: 17 IRH*LFPGAYSLPKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIED 196 +R +F ++ + A+ + N +SGS + E + + K LSD I D Sbjct: 343 VRIQMFEKSFIIDNAINTFDTLVPNIHMSGSFAKEKFCNIFGHPISKPVWADLSDSDIID 402 Query: 197 TLEKVVRLLA-YISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSK 373 ++ R L+ Y S YR K RL ++ +H+ ++ T LK + G +F + Sbjct: 403 RFGRICRSLSHYYSGSSRKKSLYRIKYILRLSCARTLARKHKSTVRTFLK-RLGSEFLEE 461 Query: 374 M---EGMVTDLTVARDHQT 421 E V L + RD T Sbjct: 462 FFMEEEKVLSLILPRDSYT 480
>F16P_HELPJ (Q9ZJ74) Fructose-1,6-bisphosphatase (EC 3.1.3.11)| (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 290 Score = 31.2 bits (69), Expect = 1.7 Identities = 25/88 (28%), Positives = 39/88 (44%) Frame = +2 Query: 62 LKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDK 241 LK+A E F + S ++A ++KKGG + + E V LA + +K Sbjct: 185 LKKALEGFFAENYRLRYSGSMVADVHHVLVKKGGMFSYPQKKLRKLFE--VFPLALMVEK 242 Query: 242 DLFAEFYRKKLARRLLFDKSANDEHERS 325 FY K ++ L D+S HE+S Sbjct: 243 AKGEAFYFDKGVKKRLLDQSVESYHEKS 270
>GPA7_DICDI (P34045) Guanine nucleotide-binding protein alpha-7 subunit (G| alpha-7) Length = 390 Score = 31.2 bits (69), Expect = 1.7 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 8/99 (8%) Frame = +2 Query: 140 DNILKKGG-------SEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDK 298 D +L++ G S K+ + I L K + ++ +++ +DLFAE +K D Sbjct: 269 DQVLEEDGKTNRMIESIKVFGDIINQRLFKDIPIILFLNKRDLFAEKIKKTGISICFPDY 328 Query: 299 SA-NDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARD 412 + +D++E+S++ K+ TSK + T++T A D Sbjct: 329 TGPSDDYEQSLVFLKKKILSANKTSK--AVYTNVTTATD 365
>F16P_HELPY (O25936) Fructose-1,6-bisphosphatase (EC 3.1.3.11)| (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 290 Score = 30.0 bits (66), Expect = 3.7 Identities = 24/88 (27%), Positives = 40/88 (45%) Frame = +2 Query: 62 LKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDK 241 LK+A E F + S ++A ++KKGG + + E V LA + +K Sbjct: 185 LKKALEGFFAENYRLRYSGSMVADVHHVLVKKGGMFSYPQKKLRKLFE--VFPLALMVEK 242 Query: 242 DLFAEFYRKKLARRLLFDKSANDEHERS 325 FY K ++ L ++S + HE+S Sbjct: 243 AKGEAFYFDKGVKKRLLEQSVENYHEKS 270
>MATK_CALPE (Q8W7A1) Maturase K (Intron maturase)| Length = 504 Score = 30.0 bits (66), Expect = 3.7 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Frame = +2 Query: 128 ATFCDNI---LKKGGSEKLSDEAIEDTLEKVVRLLA-YISDKDLFAEFYRKKLARRLLFD 295 A FC+ + + K SD I D ++ R L+ Y S YR K RL Sbjct: 377 ANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKKSLYRVKYILRLSCV 436 Query: 296 KSANDEHERSILTKLKQQCGGQFTSKM---EGMVTDLTVARDHQT 421 K+ +H+R++ T LK + G +F + E +V L R + T Sbjct: 437 KTLARKHKRTVRTFLK-RLGSEFLEEFLTEEEVVLSLIFPRTYST 480
>MATK_ANEAN (Q8WJ37) Maturase K (Intron maturase)| Length = 503 Score = 30.0 bits (66), Expect = 3.7 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Frame = +2 Query: 128 ATFCDNI---LKKGGSEKLSDEAIEDTLEKVVRLLA-YISDKDLFAEFYRKKLARRLLFD 295 A FC+ + + K SD I D ++ R L+ Y S YR K RL Sbjct: 376 ANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKKSLYRVKYILRLSCV 435 Query: 296 KSANDEHERSILTKLKQQCGGQFTSKM---EGMVTDLTVARDHQT 421 K+ +H+R++ T LK + G +F + E +V L R + T Sbjct: 436 KTLARKHKRTVRTFLK-RLGSEFLEEFLTEEEVVLSLIFPRTYST 479
>MATK_CALPO (Q9TKD7) Maturase K (Intron maturase)| Length = 503 Score = 29.6 bits (65), Expect = 4.9 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Frame = +2 Query: 128 ATFCDNI---LKKGGSEKLSDEAIEDTLEKVVRLLA-YISDKDLFAEFYRKKLARRLLFD 295 A FC+ + + K SD I D ++ R L+ Y S YR K RL Sbjct: 376 ANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKKSLYRVKYILRLSCV 435 Query: 296 KSANDEHERSILTKLKQQCGGQFTSKM---EGMVTDLTVARDHQT 421 K+ +H+R++ T LK + G +F + E +V L R + T Sbjct: 436 KTLARKHKRTVRTFLK-RLGSEFLEEFLTEEEVVLSLIFHRTYST 479
>Y404_RICPR (Q9ZDC7) Hypothetical protein RP404| Length = 281 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Frame = +2 Query: 122 LLATFCDNILKKGGSEKL---SDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLF 292 L + D I+ GG L + I +E + ++ D+D+ +FY +K A L+ Sbjct: 30 LRRNYTDAIIAAGGIPILLPYQSDTINQLMELIDGIVIPGGDEDIHPKFYEQKYAEDLVI 89 Query: 293 DKSANDEHERSILTK 337 D E +L K Sbjct: 90 SNEERDHFEILVLKK 104
>ENKUR_MOUSE (Q6SP97) Enkurin| Length = 255 Score = 28.9 bits (63), Expect = 8.3 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Frame = +2 Query: 77 EVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDK----D 244 E C + + E + LKK ++LSDE E L+ + + + + Sbjct: 156 EYICKRNEDVKKAQEEYDNYIQENLKKAAMKRLSDEEREAVLQGLKKNWEEVHKEFQSLS 215 Query: 245 LFAEFYRKKLARRLLFDKSANDEHERSILTKLK 343 +F + KK+ ++ L + EH+ S++ K K Sbjct: 216 VFIDSVPKKIRKQKLEKEMKQLEHDISVIEKHK 248
>ASNH1_METJA (Q58516) Putative asparagine synthetase [glutamine-hydrolyzing] 1| (EC 6.3.5.4) Length = 541 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 80 VFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRL 220 + C+ GV S A+L + +C+ IL G+E D + L K + L Sbjct: 263 IICSGGVDSSLIAKLASLYCEVILYAVGTENSEDLIYAERLAKDLNL 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,443,391 Number of Sequences: 219361 Number of extensions: 1158765 Number of successful extensions: 3294 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 3204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3267 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
