ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20m24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 458 bits (231), Expect = e-126 Identities = 439/507 (86%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || || || || ||||| |||||||| |||||||||| ||||| Sbjct: 1019 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttccataagg 1078 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 1079 cacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtgctg 1138 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 |||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct: 1139 aattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagcttagtg 1198 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| | Sbjct: 1199 atgaagcaattgaagatacccttgagaaggttgtaaggttacttgcctacattagtgaca 1258 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 ||||| | ||||||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct: 1259 aggacttgtttgctgagttctatagaaagaagcttgcaaggagattgctttttgacaaga 1318 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || | Sbjct: 1319 gtgctaatgatgaacatgagagaagcatccttaccaagctaaagcaacaatgtggagggc 1378 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 | || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || Sbjct: 1379 agttcacttccaaaatggagggcatggttactgatctcactgtggcaagagatcaccagg 1438 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 1439 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 1498 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 1499 ttactgtcctcacaacaggattttggc 1525
>gb|AY336990.1| Oryza sativa (japonica cultivar-group) CUL1 mRNA, complete cds Length = 2478 Score = 458 bits (231), Expect = e-126 Identities = 439/507 (86%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || || || || ||||| |||||||| |||||||||| ||||| Sbjct: 1139 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttccataagg 1198 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 1199 cacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtgctg 1258 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 |||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct: 1259 aattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagcttagtg 1318 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| | Sbjct: 1319 atgaagcaattgaagatacccttgagaaggttgtaaggttacttgcctacattagtgaca 1378 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 ||||| | ||||||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct: 1379 aggacttgtttgctgagttctatagaaagaagcttgcaaggagattgctttttgacaaga 1438 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || | Sbjct: 1439 gtgctaatgatgaacatgagagaagcatccttaccaagctaaagcaacaatgtggagggc 1498 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 | || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || Sbjct: 1499 agttcacttccaaaatggagggcatggttactgatctcactgtggcaagagatcaccagg 1558 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 1559 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 1618 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 1619 ttactgtcctcacaacaggattttggc 1645
>dbj|AK120580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135L18, full insert sequence Length = 3731 Score = 458 bits (231), Expect = e-126 Identities = 439/507 (86%), Gaps = 1/507 (0%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || || || || ||||| |||||||| |||||||||| ||||| Sbjct: 3391 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttccataagg 3332 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 3331 cacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtgctg 3272 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 |||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct: 3271 aattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagcttagtg 3212 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| | Sbjct: 3211 atgaagcaattgaagatacccttgagaaggttgtaaggttacttgcctacattagtgaca 3152 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 ||||| | ||||||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct: 3151 aggacttgtttgctgagttctatagaaagaagcttgcaaggagattgctttttgacaaga 3092 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || | Sbjct: 3091 gtgctaatgatgaacatgagagaagcatccttaccaagctaaagcaacaatgtggagggc 3032 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 | || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || Sbjct: 3031 agttcacttccaaaatggagggcatggttactgatctcactgtggcaagagatcaccagg 2972 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 2971 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 2912 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 2911 ttactgtcctcacaacaggattttggc 2885
>dbj|AK104340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G02, full insert sequence Length = 2950 Score = 458 bits (231), Expect = e-126 Identities = 439/507 (86%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || || || || ||||| |||||||| |||||||||| ||||| Sbjct: 1196 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttccataagg 1255 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 1256 cacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtgctg 1315 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 |||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct: 1316 aattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagcttagtg 1375 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| | Sbjct: 1376 atgaagcaattgaagatacccttgagaaggttgtaaggttacttgcctacattagtgaca 1435 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 ||||| | ||||||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct: 1436 aggacttgtttgctgagttctatagaaagaagcttgcaaggagattgctttttgacaaga 1495 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || | Sbjct: 1496 gtgctaatgatgaacatgagagaagcatccttaccaagctaaagcaacaatgtggagggc 1555 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 | || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || Sbjct: 1556 agttcacttccaaaatggagggcatggttactgatctcactgtggcaagagatcaccagg 1615 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 1616 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 1675 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 1676 ttactgtcctcacaacaggattttggc 1702
>dbj|AK064940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P07, full insert sequence Length = 3029 Score = 458 bits (231), Expect = e-126 Identities = 439/507 (86%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || || || || ||||| |||||||| |||||||||| ||||| Sbjct: 1248 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttccataagg 1307 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 1308 cacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtgctg 1367 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 |||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct: 1368 aattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagcttagtg 1427 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| ||||| |||||||| |||||||| || || ||||| |||||||| ||||| | Sbjct: 1428 atgaagcaattgaagatacccttgagaaggttgtaaggttacttgcctacattagtgaca 1487 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 ||||| | ||||||||||| || || |||||||| || ||||||||||| |||||||||| Sbjct: 1488 aggacttgtttgctgagttctatagaaagaagcttgcaaggagattgctttttgacaaga 1547 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || | Sbjct: 1548 gtgctaatgatgaacatgagagaagcatccttaccaagctaaagcaacaatgtggagggc 1607 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 | || ||||| ||||||||||||||||| || || || ||||| ||||||||||| || Sbjct: 1608 agttcacttccaaaatggagggcatggttactgatctcactgtggcaagagatcaccagg 1667 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 1668 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 1727 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 1728 ttactgtcctcacaacaggattttggc 1754
>dbj|AK073947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073A13, full insert sequence Length = 2869 Score = 410 bits (207), Expect = e-111 Identities = 433/507 (85%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc-taagg 59 |||||||||||||||| || ||||| || ||||||||||| || || ||||| | ||||| Sbjct: 1281 atgacaagtatgtagcttatgtcacagaatgtttccagggtcacaccctctttcataagg 1340 Query: 60 cgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtgctg 119 | |||||||| || || || || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 1341 cccttaaagaagcattcgaggtcttctgtaacaagggtgtctctggcagttcaagtgctg 1400 Query: 120 aattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtg 179 || ||||||||||||||||||| |||||| | |||||||| |||||||||||||||||| Sbjct: 1401 aactgcttgccaccttctgtgacaatattctgaagaaaggttgcagtgaaaagctcagtg 1460 Query: 180 atgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagtgata 239 ||||||| || || ||| | || |||||||| ||| |||| || || |||||||| |||| Sbjct: 1461 atgaagccatcgaagatgctcttgagaaggtggtgcgattgcttgcatacatcagcgata 1520 Query: 240 aggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgacaaga 299 | ||||| |||||||||||||||||||| || || || ||||||||||| ||||| |||| Sbjct: 1521 aagacctctttgctgagttttacaggaaaaaacttgcaaggagattgctttttgataaga 1580 Query: 300 gtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggcc 359 |||| |||||||| |||||||||||||| || ||||| || || || ||||||||||| | Sbjct: 1581 gtgccaatgatgaacatgaaagaagcatacttaccaaactcaagcagcagtgtggtggac 1640 Query: 360 aatttacttcaaaaatggagggcatggtcaccgaccttactgttgcaagagatcatcaaa 419 |||||||||| ||||||||||| ||||| || || |||||||||||||| || ||||||| Sbjct: 1641 aatttacttctaaaatggagggaatggttactgatcttactgttgcaagggaccatcaaa 1700 Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||||||||||||||| | |||| | || ||||||||||||||||||||||| | Sbjct: 1701 ctaagtttgaagagtttgtggctgcacatcaggagttgaatcctgggatagacttggctg 1760 Query: 480 tcactgttctgacaacaggattttggc 506 |||||||| ||||||||||||| |||| Sbjct: 1761 tcactgttttgacaacaggattctggc 1787
>gb|AY106256.1| Zea mays PCO138766 mRNA sequence Length = 1503 Score = 305 bits (154), Expect = 7e-80 Identities = 319/374 (85%) Strand = Plus / Plus Query: 133 cttctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctattga 192 |||||| || |||||| | |||||||| ||||||||||||||||||||||||| || || Sbjct: 57 cttctgcgacaatattctgaagaaaggttgcagtgaaaagctcagtgatgaagccatcga 116 Query: 193 ggataccctggagaaggtagtgagattactcgcctacatcagtgataaggacctttttgc 252 ||| |||| |||||||| |||||| | || || |||||||||||||| ||||| ||||| Sbjct: 117 agatgcccttgagaaggtggtgagaatgcttgcatacatcagtgataaagacctgtttgc 176 Query: 253 tgagttttacaggaagaagctggctaggagattgctatttgacaagagtgctaatgatga 312 ||||| || ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 177 cgagttctataggaagaagcttgcaagaagattactttttgacaaaagtgctaatgatga 236 Query: 313 gcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggccaatttacttcaaa 372 |||||| ||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 237 gcatgagagaagtattctgacaaagctcaaacaacagtgtgggggacagtttacttcaaa 296 Query: 373 aatggagggcatggtcaccgaccttactgttgcaagagatcatcaaactaagtttgaaga 432 ||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| || Sbjct: 297 aatggagggcatggttactgaccttactgtcgctagagatcatcaaactaagtttgagga 356 Query: 433 gttcataagcacacaccctgaattgaatcctgggatagacttggcggtcactgttctgac 492 ||| || ||| || || |||||||||||||||||||| || || |||||| |||| Sbjct: 357 gtttgtagctggacatccagagttgaatcctgggatagacttagctgttactgttttgac 416 Query: 493 aacaggattttggc 506 ||| ||||| |||| Sbjct: 417 aacgggattctggc 430
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 216 bits (109), Expect = 5e-53 Identities = 208/241 (86%) Strand = Plus / Minus Query: 266 aagaagctggctaggagattgctatttgacaagagtgctaatgatgagcatgaaagaagc 325 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 131891 aagaagcttgcaaggagattgctttttgacaagagtgctaatgatgaacatgagagaagc 131832 Query: 326 attctgaccaagctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatg 385 || || ||||||||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct: 131831 atccttaccaagctaaagcaacaatgtggagggcagttcacttccaaaatggagggcatg 131772 Query: 386 gtcaccgaccttactgttgcaagagatcatcaaactaagtttgaagagttcataagcaca 445 || || || || ||||| ||||||||||| || |||| ||||||||||||||||||||| Sbjct: 131771 gttactgatctcactgtggcaagagatcaccaggctaaatttgaagagttcataagcaca 131712 Query: 446 caccctgaattgaatcctgggatagacttggcggtcactgttctgacaacaggattttgg 505 ||| | || ||||||||||| |||| ||| || || ||||| || ||||||||||||||| Sbjct: 131711 cactcagagttgaatcctggaatagccttagctgttactgtcctcacaacaggattttgg 131652 Query: 506 c 506 | Sbjct: 131651 c 131651 Score = 180 bits (91), Expect = 3e-42 Identities = 139/155 (89%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| ||||| |||||||||||||| || |||||||||||||| ||||| |||||||||| Sbjct: 132270 aggcacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtg 132211 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 132210 ctgaattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagctta 132151 Query: 177 gtgatgaagctattgaggataccctggagaaggta 211 |||||||||| ||||| |||||||| ||||||||| Sbjct: 132150 gtgatgaagcaattgaagatacccttgagaaggta 132116 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 148232 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 148285 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc 54 |||||||||||||||| || || || || ||||| |||||||| |||||||||| Sbjct: 132409 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttcc 132356 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 218 ttactcgcctacatcagtgataaggacctttttgctgagtt 258 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 132034 ttacttgcctacattagtgacaaggacttgtttgctgagtt 131994
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 216 bits (109), Expect = 5e-53 Identities = 208/241 (86%) Strand = Plus / Minus Query: 266 aagaagctggctaggagattgctatttgacaagagtgctaatgatgagcatgaaagaagc 325 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 69500 aagaagcttgcaaggagattgctttttgacaagagtgctaatgatgaacatgagagaagc 69441 Query: 326 attctgaccaagctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatg 385 || || ||||||||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct: 69440 atccttaccaagctaaagcaacaatgtggagggcagttcacttccaaaatggagggcatg 69381 Query: 386 gtcaccgaccttactgttgcaagagatcatcaaactaagtttgaagagttcataagcaca 445 || || || || ||||| ||||||||||| || |||| ||||||||||||||||||||| Sbjct: 69380 gttactgatctcactgtggcaagagatcaccaggctaaatttgaagagttcataagcaca 69321 Query: 446 caccctgaattgaatcctgggatagacttggcggtcactgttctgacaacaggattttgg 505 ||| | || ||||||||||| |||| ||| || || ||||| || ||||||||||||||| Sbjct: 69320 cactcagagttgaatcctggaatagccttagctgttactgtcctcacaacaggattttgg 69261 Query: 506 c 506 | Sbjct: 69260 c 69260 Score = 180 bits (91), Expect = 3e-42 Identities = 139/155 (89%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| ||||| |||||||||||||| || |||||||||||||| ||||| |||||||||| Sbjct: 69879 aggcacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtg 69820 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 69819 ctgaattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagctta 69760 Query: 177 gtgatgaagctattgaggataccctggagaaggta 211 |||||||||| ||||| |||||||| ||||||||| Sbjct: 69759 gtgatgaagcaattgaagatacccttgagaaggta 69725 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 85842 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 85895 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc 54 |||||||||||||||| || || || || ||||| |||||||| |||||||||| Sbjct: 70018 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttcc 69965 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 218 ttactcgcctacatcagtgataaggacctttttgctgagtt 258 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 69643 ttacttgcctacattagtgacaaggacttgtttgctgagtt 69603
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 216 bits (109), Expect = 5e-53 Identities = 208/241 (86%) Strand = Plus / Minus Query: 266 aagaagctggctaggagattgctatttgacaagagtgctaatgatgagcatgaaagaagc 325 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 15115839 aagaagcttgcaaggagattgctttttgacaagagtgctaatgatgaacatgagagaagc 15115780 Query: 326 attctgaccaagctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatg 385 || || ||||||||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct: 15115779 atccttaccaagctaaagcaacaatgtggagggcagttcacttccaaaatggagggcatg 15115720 Query: 386 gtcaccgaccttactgttgcaagagatcatcaaactaagtttgaagagttcataagcaca 445 || || || || ||||| ||||||||||| || |||| ||||||||||||||||||||| Sbjct: 15115719 gttactgatctcactgtggcaagagatcaccaggctaaatttgaagagttcataagcaca 15115660 Query: 446 caccctgaattgaatcctgggatagacttggcggtcactgttctgacaacaggattttgg 505 ||| | || ||||||||||| |||| ||| || || ||||| || ||||||||||||||| Sbjct: 15115659 cactcagagttgaatcctggaatagccttagctgttactgtcctcacaacaggattttgg 15115600 Query: 506 c 506 | Sbjct: 15115599 c 15115599 Score = 180 bits (91), Expect = 3e-42 Identities = 139/155 (89%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| ||||| |||||||||||||| || |||||||||||||| ||||| |||||||||| Sbjct: 15116218 aggcacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtg 15116159 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 15116158 ctgaattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagctta 15116099 Query: 177 gtgatgaagctattgaggataccctggagaaggta 211 |||||||||| ||||| |||||||| ||||||||| Sbjct: 15116098 gtgatgaagcaattgaagatacccttgagaaggta 15116064 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 15132180 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 15132233 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc 54 |||||||||||||||| || || || || ||||| |||||||| |||||||||| Sbjct: 15116357 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttcc 15116304 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 218 ttactcgcctacatcagtgataaggacctttttgctgagtt 258 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 15115982 ttacttgcctacattagtgacaaggacttgtttgctgagtt 15115942
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 216 bits (109), Expect = 5e-53 Identities = 208/241 (86%) Strand = Plus / Minus Query: 266 aagaagctggctaggagattgctatttgacaagagtgctaatgatgagcatgaaagaagc 325 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 87805 aagaagcttgcaaggagattgctttttgacaagagtgctaatgatgaacatgagagaagc 87746 Query: 326 attctgaccaagctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatg 385 || || ||||||||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct: 87745 atccttaccaagctaaagcaacaatgtggagggcagttcacttccaaaatggagggcatg 87686 Query: 386 gtcaccgaccttactgttgcaagagatcatcaaactaagtttgaagagttcataagcaca 445 || || || || ||||| ||||||||||| || |||| ||||||||||||||||||||| Sbjct: 87685 gttactgatctcactgtggcaagagatcaccaggctaaatttgaagagttcataagcaca 87626 Query: 446 caccctgaattgaatcctgggatagacttggcggtcactgttctgacaacaggattttgg 505 ||| | || ||||||||||| |||| ||| || || ||||| || ||||||||||||||| Sbjct: 87625 cactcagagttgaatcctggaatagccttagctgttactgtcctcacaacaggattttgg 87566 Query: 506 c 506 | Sbjct: 87565 c 87565 Score = 180 bits (91), Expect = 3e-42 Identities = 139/155 (89%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| ||||| |||||||||||||| || |||||||||||||| ||||| |||||||||| Sbjct: 88184 aggcacttaaggaggcttttgaagttttttgcaacaaaggtgtttctggcagttcaagtg 88125 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 88124 ctgaattactagctaccttctgtgacaatatcttaaagaaaggcggtagtgaaaagctta 88065 Query: 177 gtgatgaagctattgaggataccctggagaaggta 211 |||||||||| ||||| |||||||| ||||||||| Sbjct: 88064 gtgatgaagcaattgaagatacccttgagaaggta 88030 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 104146 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 104199 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggggcatactctcttcc 54 |||||||||||||||| || || || || ||||| |||||||| |||||||||| Sbjct: 88323 atgacaagtatgtagcttatgttacggattgttttcaggggcacactctcttcc 88270 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 218 ttactcgcctacatcagtgataaggacctttttgctgagtt 258 ||||| |||||||| ||||| |||||| | ||||||||||| Sbjct: 87948 ttacttgcctacattagtgacaaggacttgtttgctgagtt 87908
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 200 bits (101), Expect = 3e-48 Identities = 197/229 (86%) Strand = Plus / Minus Query: 278 aggagattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaag 337 ||||||||||| ||||| |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 54080 aggagattgctttttgataagagtgccaatgatgaacatgaaagaagcatacttaccaaa 54021 Query: 338 ctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatggtcaccgacctt 397 || || || ||||||||||| ||||||||||| ||||||||||| ||||| || || ||| Sbjct: 54020 ctcaagcagcagtgtggtggacaatttacttctaaaatggagggaatggttactgatctt 53961 Query: 398 actgttgcaagagatcatcaaactaagtttgaagagttcataagcacacaccctgaattg 457 ||||||||||| || ||||||||||||||||||||||| | |||| | || ||| Sbjct: 53960 actgttgcaagggaccatcaaactaagtttgaagagtttgtggctgcacatcaggagttg 53901 Query: 458 aatcctgggatagacttggcggtcactgttctgacaacaggattttggc 506 |||||||||||||||||||| ||||||||| ||||||||||||| |||| Sbjct: 53900 aatcctgggatagacttggctgtcactgttttgacaacaggattctggc 53852 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| |||||||| || || || || ||||| ||||| ||||||||||| |||||||||| Sbjct: 54489 aggcccttaaagaagcattcgaggtcttctgtaacaagggtgtctctggcagttcaagtg 54430 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||| ||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 54429 ctgaactgcttgccaccttctgtgacaatattctgaagaaaggttgcagtgaaaagctca 54370 Query: 177 gtgatgaagc 186 |||||||||| Sbjct: 54369 gtgatgaagc 54360 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 227 tacatcagtgataaggacctttttgctgagttttacagg 265 |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 54237 tacatcagcgataaagacctctttgctgagttttacagg 54199 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggg 40 |||||||||||||||| || ||||| || ||||||||||| Sbjct: 54638 atgacaagtatgtagcttatgtcacagaatgtttccaggg 54599
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 200 bits (101), Expect = 3e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 278 aggagattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaag 337 ||||||||||| ||||| |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 91820 aggagattgctttttgataagagtgccaatgatgaacatgaaagaagcatacttaccaaa 91879 Query: 338 ctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatggtcaccgacctt 397 || || || ||||||||||| ||||||||||| ||||||||||| ||||| || || ||| Sbjct: 91880 ctcaagcagcagtgtggtggacaatttacttctaaaatggagggaatggttactgatctt 91939 Query: 398 actgttgcaagagatcatcaaactaagtttgaagagttcataagcacacaccctgaattg 457 ||||||||||| || ||||||||||||||||||||||| | |||| | || ||| Sbjct: 91940 actgttgcaagggaccatcaaactaagtttgaagagtttgtggctgcacatcaggagttg 91999 Query: 458 aatcctgggatagacttggcggtcactgttctgacaacaggattttggc 506 |||||||||||||||||||| ||||||||| ||||||||||||| |||| Sbjct: 92000 aatcctgggatagacttggctgtcactgttttgacaacaggattctggc 92048 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| |||||||| || || || || ||||| ||||| ||||||||||| |||||||||| Sbjct: 91411 aggcccttaaagaagcattcgaggtcttctgtaacaagggtgtctctggcagttcaagtg 91470 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||| ||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 91471 ctgaactgcttgccaccttctgtgacaatattctgaagaaaggttgcagtgaaaagctca 91530 Query: 177 gtgatgaagc 186 |||||||||| Sbjct: 91531 gtgatgaagc 91540 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 227 tacatcagtgataaggacctttttgctgagttttacagg 265 |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 91663 tacatcagcgataaagacctctttgctgagttttacagg 91701 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggg 40 |||||||||||||||| || ||||| || ||||||||||| Sbjct: 91262 atgacaagtatgtagcttatgtcacagaatgtttccaggg 91301
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 200 bits (101), Expect = 3e-48 Identities = 197/229 (86%) Strand = Plus / Minus Query: 278 aggagattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaag 337 ||||||||||| ||||| |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 2775754 aggagattgctttttgataagagtgccaatgatgaacatgaaagaagcatacttaccaaa 2775695 Query: 338 ctaaaacaacagtgtggtggccaatttacttcaaaaatggagggcatggtcaccgacctt 397 || || || ||||||||||| ||||||||||| ||||||||||| ||||| || || ||| Sbjct: 2775694 ctcaagcagcagtgtggtggacaatttacttctaaaatggagggaatggttactgatctt 2775635 Query: 398 actgttgcaagagatcatcaaactaagtttgaagagttcataagcacacaccctgaattg 457 ||||||||||| || ||||||||||||||||||||||| | |||| | || ||| Sbjct: 2775634 actgttgcaagggaccatcaaactaagtttgaagagtttgtggctgcacatcaggagttg 2775575 Query: 458 aatcctgggatagacttggcggtcactgttctgacaacaggattttggc 506 |||||||||||||||||||| ||||||||| ||||||||||||| |||| Sbjct: 2775574 aatcctgggatagacttggctgtcactgttttgacaacaggattctggc 2775526 Score = 139 bits (70), Expect = 1e-29 Identities = 115/130 (88%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| |||||||| || || || || ||||| ||||| ||||||||||| |||||||||| Sbjct: 2776163 aggcccttaaagaagcattcgaggtcttctgtaacaagggtgtctctggcagttcaagtg 2776104 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 ||||| ||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 2776103 ctgaactgcttgccaccttctgtgacaatattctgaagaaaggttgcagtgaaaagctca 2776044 Query: 177 gtgatgaagc 186 |||||||||| Sbjct: 2776043 gtgatgaagc 2776034 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 227 tacatcagtgataaggacctttttgctgagttttacagg 265 |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 2775911 tacatcagcgataaagacctctttgctgagttttacagg 2775873 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatacgtcactgactgtttccaggg 40 |||||||||||||||| || ||||| || ||||||||||| Sbjct: 2776312 atgacaagtatgtagcttatgtcacagaatgtttccaggg 2776273
>ref|NM_116491.2| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.1 mRNA, complete cds Length = 2747 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1408 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1467 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1468 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1527 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1528 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1587 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1588 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1647 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1648 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1693
>ref|NM_001036498.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.2 mRNA, complete cds Length = 2655 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1316 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1375 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1376 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1435 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1436 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1495 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1496 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1555 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1556 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1601
>ref|NM_001036499.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.3 mRNA, complete cds Length = 2653 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1314 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1373 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1374 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1433 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1434 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1493 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1494 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1553 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1554 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1599
>gb|AY133878.1| Arabidopsis thaliana clone U09998 putative cullin 1 protein (AT4g02570) mRNA, complete cds Length = 2248 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1139 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1198 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1199 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1258 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1259 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1318 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1319 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1378 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1379 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1424
>gb|AY046030.1| Arabidopsis thaliana putative cullin 1 protein (At4g02570) mRNA, complete cds Length = 2748 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1395 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1454 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1455 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1514 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1515 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1574 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1575 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1634 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1635 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1680
>emb|AJ318017.1|ATH318017 Arabidopsis thaliana mRNA for cullin 1 (cul1 gene) Length = 2456 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 1173 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 1232 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggtagtgagattac 221 | ||||||||||| |||||||||||||| || ||||| || |||||||| || | ||| | Sbjct: 1233 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggttgtcaaattgc 1292 Query: 222 tcgcctacatcagtgataaggacctttttgctgagttttacaggaagaagctggctagga 281 | || ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| | | Sbjct: 1293 ttgcatacataagtgacaaggatcttttcgctgagttctacaggaagaagctggcccgta 1352 Query: 282 gattgctatttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaa 341 | | ||||||| |||||||||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1353 ggctcttatttgatcgcagtgctaatgatgatcatgagagaagtatcctgacaaagctca 1412 Query: 342 aacaacagtgtggtggccaatttacttcaaaaatggagggcatggt 387 | ||||| |||||||| || |||||||| || |||||||||||||| Sbjct: 1413 agcaacaatgtggtggacagtttacttctaagatggagggcatggt 1458
>gb|BT013673.1| Lycopersicon esculentum clone 132492F, mRNA sequence Length = 2887 Score = 133 bits (67), Expect = 6e-28 Identities = 268/335 (80%) Strand = Plus / Plus Query: 56 aaggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagt 115 |||||||||||||| |||||||| | ||||||||||| ||||| ||||||| ||||| Sbjct: 1286 aaggcgcttaaagaagcttttgagcttttctgcaacaagggtgttgctggtagctcaagc 1345 Query: 116 gctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctc 175 |||||| | ||||||||||||||||| || ||| | || ||||| || ||||| || | Sbjct: 1346 gctgaacttcttgccaccttctgtgacaacattctcaaaaaaggagggagtgagaaattg 1405 Query: 176 agtgatgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagt 235 ||||||||||||||||| || || |||| ||||| || | |||| || || || ||| Sbjct: 1406 agtgatgaagctattgaagaaacgttggaaaaggtggtaaagctactagcttatattagt 1465 Query: 236 gataaggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgac 295 ||||||||| | ||||| || || || ||||| ||||| || || | ||| ||||||| Sbjct: 1466 gataaggacttgtttgcagaattctataggaaaaagctagcccggcggttgttatttgat 1525 Query: 296 aagagtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggt 355 |||||||| |||||||| ||||||||||| || || || ||| | || || |||||||| Sbjct: 1526 aagagtgccaatgatgaacatgaaagaagtatcctaacaaagttgaagcagcagtgtggg 1585 Query: 356 ggccaatttacttcaaaaatggagggcatggtcac 390 || || || || ||||| |||||||| |||||||| Sbjct: 1586 gggcagttcacatcaaagatggagggaatggtcac 1620
>emb|AJ344535.1|NTA344535 Nicotiana tabacum partial mRNA for cullin 1C (cul1C gene) Length = 1833 Score = 133 bits (67), Expect = 6e-28 Identities = 268/335 (80%) Strand = Plus / Plus Query: 56 aaggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagt 115 ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||| |||||| Sbjct: 222 aaggcacttaaagaagcttttgaagtcttctgcaacaagggtgttgctggtagctcaagt 281 Query: 116 gctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctc 175 |||||| | |||||||| ||||| || || ||| | || ||||| || ||||| || | Sbjct: 282 gctgaacttcttgccacattctgcgacaacattctcaaaaaaggtgggagtgagaaattg 341 Query: 176 agtgatgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagt 235 ||||||||||| ||||| || || ||||||||||| || | | || || || || ||| Sbjct: 342 agtgatgaagccattgaagagacgctggagaaggttgtaaagctgctagcatatattagt 401 Query: 236 gataaggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgac 295 ||||||||| | ||||| || || || ||||| ||||| || || | ||| ||||||| Sbjct: 402 gataaggacttgtttgcagaattctataggaaaaagctagcccggcggttgttatttgat 461 Query: 296 aagagtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggt 355 |||||||| |||||||| ||||| ||||| || ||||| ||| | || || |||||||| Sbjct: 462 aagagtgccaatgatgaacatgagagaagtatcctgacaaagttgaagcagcagtgtggg 521 Query: 356 ggccaatttacttcaaaaatggagggcatggtcac 390 ||||| || || ||||| ||||| || |||||||| Sbjct: 522 ggccagttcacatcaaagatggaaggaatggtcac 556
>dbj|AB080190.1| Pisum sativum cul1 mRNA for cullin-like protein1, complete cds Length = 2724 Score = 131 bits (66), Expect = 2e-27 Identities = 270/338 (79%) Strand = Plus / Plus Query: 56 aaggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagt 115 ||||| ||||| ||||||||||| | || |||||||| ||||| |||| || |||||| Sbjct: 1333 aaggctcttaaggaggcttttgagattttttgcaacaagggtgttgctggaagctcaagt 1392 Query: 116 gctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctc 175 || ||| |||||||||| || |||||||||||| | |||||||| || |||||||| | Sbjct: 1393 gccgaactgcttgccactttttgtgataatattctcaagaaaggaggaagtgaaaaattg 1452 Query: 176 agtgatgaagctattgaggataccctggagaaggtagtgagattactcgcctacatcagt 235 ||||||||||| ||||| ||||| | |||||||| || | |||| ||||| || ||| Sbjct: 1453 agtgatgaagcaattgaagatacttttgagaaggttgtcaagctacttgcctatattagt 1512 Query: 236 gataaggacctttttgctgagttttacaggaagaagctggctaggagattgctatttgac 295 |||||||| | ||||| || ||||| ||||| ||||| ||| | || | || ||||| Sbjct: 1513 gataaggatttgtttgccgaattttataggaaaaagcttgctcgaaggcttctttttgat 1572 Query: 296 aagagtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggt 355 ||||||||||||||||| ||||| || || ||| | || || | || ||||| |||||| Sbjct: 1573 aagagtgctaatgatgaccatgagaggagtattttaacaaaattgaagcaacaatgtggt 1632 Query: 356 ggccaatttacttcaaaaatggagggcatggtcaccga 393 || |||||||| ||||| ||||| || ||||| ||||| Sbjct: 1633 ggtcaatttacctcaaagatggaaggaatggttaccga 1670
>emb|AJ344534.1|NTA344534 Nicotiana tabacum mRNA for cullin 1B (cul1B gene) Length = 2758 Score = 121 bits (61), Expect = 2e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 137 tgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctattgaggat 196 |||||||||||| | || |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1411 tgtgataatattcttaaaaaaggcgggagtgaaaagctcagtgatgacgctattgaggag 1470 Query: 197 accctggagaaggtagtgagattactcgcctacatcagtgataaggacctttttgctgag 256 || |||| ||||| || | | ||||| ||||||||||| || ||||||| ||| ||| Sbjct: 1471 acattggataaggtggtcaagcttctcgcgtacatcagtgacaaagacctttatgcggag 1530 Query: 257 ttttacaggaagaagctggctaggagattgctatttgacaagagtgctaatgatgagcat 316 || |||||||||||||| || | ||||||| ||||| || ||||| |||||||| ||| Sbjct: 1531 ttctacaggaagaagctttctcgtcgattgctctttgataaaagtgccaatgatgaccat 1590 Query: 317 gaaag 321 ||||| Sbjct: 1591 gaaag 1595
>dbj|AK061409.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B07, full insert sequence Length = 1189 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 399 ctgttgcaagagatcatcaaactaagtttgaagagttcataagcacacaccctgaattga 458 |||||||||| || ||||||||||||||||||||||| | |||| | || |||| Sbjct: 1 ctgttgcaagggaccatcaaactaagtttgaagagtttgtggctgcacatcaggagttga 60 Query: 459 atcctgggatagacttggcggtcactgttctgacaacaggattttggc 506 ||||||||||||||||||| ||||||||| ||||||||||||| |||| Sbjct: 61 atcctgggatagacttggctgtcactgttttgacaacaggattctggc 108
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 420 ctaagtttgaagagttcataagcacacaccctgaattgaatcctgggatagacttggcgg 479 |||| |||||||||||||||||||||||| | || ||||||||||| |||| ||| || | Sbjct: 141932 ctaaatttgaagagttcataagcacacactcagagttgaatcctggaatagccttagctg 141873 Query: 480 tcactgttctgacaacaggattttggc 506 | ||||| || |||||||||||||||| Sbjct: 141872 ttactgtcctcacaacaggattttggc 141846
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 299 agtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggc 358 |||||||||||||| ||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 78987 agtgctaatgatgatcatgagagaagtatcctgacaaagctcaagcaacaatgtggtgga 78928 Query: 359 caatttacttcaaaaatggagggcatggt 387 || |||||||| || |||||||||||||| Sbjct: 78927 cagtttacttctaagatggagggcatggt 78899 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 79443 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 79384 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggta 211 | ||||||||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 79383 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggta 79334
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 299 agtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacagtgtggtggc 358 |||||||||||||| ||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 167758 agtgctaatgatgatcatgagagaagtatcctgacaaagctcaagcaacaatgtggtgga 167817 Query: 359 caatttacttcaaaaatggagggcatggt 387 || |||||||| || |||||||||||||| Sbjct: 167818 cagtttacttctaagatggagggcatggt 167846 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 102 ctggtagttcaagtgctgaattgcttgccaccttctgtgataatattttaaagaaaggcg 161 |||| ||||||||||| ||| | ||||| || || || || |||||| | || || || | Sbjct: 167302 ctggaagttcaagtgcagaactacttgcaacattttgcgacaatattctcaaaaaggggg 167361 Query: 162 gcagtgaaaagctcagtgatgaagctattgaggataccctggagaaggta 211 | ||||||||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 167362 gaagtgaaaagctgagtgatgaagctatcgaagatacgcttgagaaggta 167411
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 79.8 bits (40), Expect = 8e-12 Identities = 112/136 (82%) Strand = Plus / Minus Query: 57 aggcgcttaaagaggcttttgaagtgttctgcaacaaaggtgtctctggtagttcaagtg 116 |||| ||||||||||||||||| || || |||||||||||||| |||| | || |||| Sbjct: 81534 aggctcttaaagaggcttttgaggtcttttgcaacaaaggtgttgctggaaactctagtg 81475 Query: 117 ctgaattgcttgccaccttctgtgataatattttaaagaaaggcggcagtgaaaagctca 176 | ||| | |||||||| || |||||||| ||| | |||||||| || |||||||| | | Sbjct: 81474 cagaacttcttgccactttttgtgataacattcttaagaaaggaggaagtgaaaaattga 81415 Query: 177 gtgatgaagctattga 192 |||||||||| ||||| Sbjct: 81414 gtgatgaagcaattga 81399 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 290 tttgacaagagtgctaatgatgagcatgaaagaagcattctgaccaagctaaaacaacag 349 |||||||||||||| |||||||| || || ||||| ||| |||| || | || |||||| Sbjct: 79991 tttgacaagagtgccaatgatgatcacgagagaagtattttgacaaaattgaagcaacag 79932 Query: 350 tgtggtggccaatttacttcaaaaatggagggcatggtca 389 |||||||| || ||||| ||||| ||||| || ||||||| Sbjct: 79931 tgtggtggacagtttacctcaaagatggaaggaatggtca 79892
>emb|AJ344533.1|NTA344533 Nicotiana tabacum mRNA for cullin 1A (cul1A gene) Length = 2693 Score = 77.8 bits (39), Expect = 3e-11 Identities = 198/251 (78%) Strand = Plus / Plus Query: 137 tgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctattgaggat 196 ||||||||||| | ||||| || || |||||||| || |||||||| ||||||||||| Sbjct: 1324 tgtgataatatccttaagaagggtgggagtgaaaaacttagtgatgatgctattgaggaa 1383 Query: 197 accctggagaaggtagtgagattactcgcctacatcagtgataaggacctttttgctgag 256 || |||| ||||| || | | || || || |||||||| || ||||| ||||||||| Sbjct: 1384 acattggataaggtggtaaagcttctagcatatatcagtgacaaagacctgtttgctgag 1443 Query: 257 ttttacaggaagaagctggctaggagattgctatttgacaagagtgctaatgatgagcat 316 || |||||||||||||| || | ||||||| ||||| || ||||| ||||| || ||| Sbjct: 1444 ttctacaggaagaagctttctcgtcgattgctttttgataaaagtgccaatgacgaccat 1503 Query: 317 gaaagaagcattctgaccaagctaaaacaacagtgtggtggccaatttacttcaaaaatg 376 ||||| || | || ||| |||| || ||||||||||| || ||||| ||||| ||| Sbjct: 1504 gaaaggcttatcttaacaaagttaaagcagcagtgtggtgggcagtttacgtcaaagatg 1563 Query: 377 gagggcatggt 387 ||||| ||||| Sbjct: 1564 gagggaatggt 1574
>ref|NM_193824.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2241 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 1197 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 1250
>dbj|AK073477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D14, full insert sequence Length = 2634 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 ctgtgataatattttaaagaaaggcggcagtgaaaagctcagtgatgaagctat 189 |||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||| Sbjct: 1305 ctgtgatagtatcttaaaaagaggtggaagtgaaaagctaagtgatgaagctat 1358
>gb|AC122186.2| Mus musculus BAC clone RP23-19M20 from 1, complete sequence Length = 160653 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 tgataatattttaaagaaagg 159 ||||||||||||||||||||| Sbjct: 41236 tgataatattttaaagaaagg 41256
>gb|AC108671.5| Homo sapiens 3 BAC RP11-443P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173877 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 cttcaaaaatggagggcatgg 386 ||||||||||||||||||||| Sbjct: 154841 cttcaaaaatggagggcatgg 154861
>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3 Contains part of a novel gene (FLJ32928), two novel genes, and the 5' end of the gene for androgen induced protein (AIG-1, CGI-103) (includes FLJ10485). Contains a CpG island, complete sequence Length = 137947 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 cacacaccctgaattgaatcctggg 466 |||||||||||||||| |||||||| Sbjct: 24015 cacacaccctgaattggatcctggg 24039
>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 cctttttgctgagttttacag 264 ||||||||||||||||||||| Sbjct: 45707 cctttttgctgagttttacag 45727
>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3, complete sequence Length = 192501 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 tgtggtggccaatttacttca 370 ||||||||||||||||||||| Sbjct: 25024 tgtggtggccaatttacttca 25004
>gb|AC167171.2| Mus musculus BAC clone RP23-409H8 from chromosome 13, complete sequence Length = 203840 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 cacacaccctgaattgaatcctgg 465 |||||||| ||||||||||||||| Sbjct: 155500 cacacaccatgaattgaatcctgg 155523
>gb|AC102540.7| Mus musculus chromosome 3, clone RP23-98H24, complete sequence Length = 207497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 actgtttccaggggcatact 47 |||||||||||||||||||| Sbjct: 78161 actgtttccaggggcatact 78142
>gb|AC112971.8| Mus musculus chromosome 1, clone RP24-444M12, complete sequence Length = 161310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatac 20 |||||||||||||||||||| Sbjct: 93418 atgacaagtatgtagcatac 93399
>gb|AC157814.10| Mus musculus chromosome 3, clone RP24-134L24, complete sequence Length = 150033 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 actgtttccaggggcatact 47 |||||||||||||||||||| Sbjct: 10562 actgtttccaggggcatact 10581
>gb|AC107482.2| Homo sapiens 3p BAC RP11-271J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180631 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ctggagaaggtagtgagatt 219 |||||||||||||||||||| Sbjct: 169295 ctggagaaggtagtgagatt 169276
>emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chromosome 6 Contains part of the UTRN gene for utrophin (homologous to dystrophin) (DRP, DRP1, DMDL). Contains two CpG islands, complete sequence Length = 129479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gataatattttaaagaaagg 159 |||||||||||||||||||| Sbjct: 39202 gataatattttaaagaaagg 39221
>emb|AL356358.19| Human DNA sequence from clone RP11-383C12 on chromosome Xq11.1-13.1 Contains the 3' end of the AR gene for androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) and a B lymphoma Mo-MLV insertion region (mouse) (BMI1) pseudogene, complete sequence Length = 161417 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 tacatcagtgataaggaccttttt 250 |||||||||| ||||||||||||| Sbjct: 114274 tacatcagtgttaaggaccttttt 114297
>emb|AL135906.19| Human DNA sequence from clone RP1-20N11 on chromosome 6, complete sequence Length = 39347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 aacagtgtggtggccaattt 364 |||||||||||||||||||| Sbjct: 27178 aacagtgtggtggccaattt 27197
>gb|AC016229.10| Homo sapiens chromosome 18, clone RP11-27G24, complete sequence Length = 149787 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cttctgtgataatattttaa 152 |||||||||||||||||||| Sbjct: 84423 cttctgtgataatattttaa 84404
>gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, complete sequence Length = 180563 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atgacaagtatgtagcatac 20 |||||||||||||||||||| Sbjct: 166144 atgacaagtatgtagcatac 166125
>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence Length = 165843 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tgaaaagctcagtgatgaag 185 |||||||||||||||||||| Sbjct: 9000 tgaaaagctcagtgatgaag 9019
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tgtgataatattttaaagaa 156 |||||||||||||||||||| Sbjct: 12056 tgtgataatattttaaagaa 12037
>ref|XM_233005.2| PREDICTED: Rattus norvegicus zinc finger and BTB domain containing 5 (predicted) (Zbtb5_predicted), mRNA Length = 2843 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gtctctggtagttcaagtgctgaa 121 |||||||||||||||| ||||||| Sbjct: 433 gtctctggtagttcaactgctgaa 410
>gb|AC087879.8| Homo sapiens 12q BAC RP11-166B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165693 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgataatattttaaagaaag 158 |||||||||||||||||||| Sbjct: 96614 tgataatattttaaagaaag 96633
>emb|CT030664.5| Mouse DNA sequence from clone RP23-357K7 on chromosome 13, complete sequence Length = 192064 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 cacacaccctgaattgaatcctgg 465 |||||||| ||||||||||||||| Sbjct: 13427 cacacaccatgaattgaatcctgg 13450
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tgtgataatattttaaagaa 156 |||||||||||||||||||| Sbjct: 43749 tgtgataatattttaaagaa 43768
>emb|AL390798.3|CNS06C7P Human chromosome 14 DNA sequence BAC R-21O19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 154140 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cttctgtgataatattttaaagaa 156 ||||||||||||||||||| |||| Sbjct: 3904 cttctgtgataatattttatagaa 3927 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,094,623 Number of Sequences: 3902068 Number of extensions: 5094623 Number of successful extensions: 97795 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97568 Number of HSP's gapped (non-prelim): 218 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
