ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480031.1| Oryza sativa (japonica cultivar-group), mRNA 295 7e-77
2dbj|AK072710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 7e-77
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
5dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
6dbj|AK100884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
7ref|NM_116741.2| Arabidopsis thaliana calcium ion binding / disu... 64 5e-07
8gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
9gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
10emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, ... 64 5e-07
11gb|AY039856.1| Arabidopsis thaliana AT4g05020/T32N4_4 mRNA, comp... 64 5e-07
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
13emb|BX827398.1|CNS0A2CJ Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
14gb|BT002241.1| Arabidopsis thaliana At4g05020/T32N4_4 mRNA, comp... 64 5e-07
15gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana... 64 5e-07
16gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 64 5e-07
17ref|NM_118269.2| Arabidopsis thaliana NADH dehydrogenase AT4G214... 58 3e-05
18emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 58 3e-05
19emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BA... 58 3e-05
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
21gb|AY086046.1| Arabidopsis thaliana clone 20805 mRNA, complete s... 52 0.002
22dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
23dbj|AK103572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
24dbj|AK102878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
25emb|AJ245862.1|STU245862 Solanum tuberosum mRNA for external rot... 48 0.029
26dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 48 0.029
27ref|XM_538779.2| PREDICTED: Canis familiaris similar to Kruppel-... 46 0.11
28ref|NM_118962.3| Arabidopsis thaliana NADH dehydrogenase/ disulf... 44 0.45
29gb|BT025339.1| Arabidopsis thaliana At4g28220 mRNA, complete cds 44 0.45
30emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ... 44 0.45
31emb|BX828330.1|CNS0A2WJ Arabidopsis thaliana Full-length cDNA Co... 44 0.45
32emb|BX828002.1|CNS0A29V Arabidopsis thaliana Full-length cDNA Co... 44 0.45
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.45
34gb|AY106876.1| Zea mays PCO100812 mRNA sequence 44 0.45
35ref|XM_463859.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
36ref|XM_506680.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.8
37gb|BT013752.1| Lycopersicon esculentum clone 132615R, mRNA sequence 42 1.8
38gb|AC087774.27| Homo sapiens 12p BAC RP11-633O13 (Roswell Park C... 42 1.8
39dbj|AK016606.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.8
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
41dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
42dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
43dbj|AK073508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
44dbj|AK061078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
45dbj|D10985.1|RICCBP3 Oryza sativa (japonica cultivar-group) cbp3... 42 1.8
46ref|NM_188734.1| Oryza sativa (japonica cultivar-group), predic... 40 7.1
47ref|NM_184912.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
48ref|XM_478877.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
49gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 7.1
50gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, co... 40 7.1
51gb|AC120375.11| Mus musculus chromosome 14, clone RP24-123H11, c... 40 7.1
52ref|XM_365940.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.1
53gb|AY658848.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.1
54gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
55gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, compl... 40 7.1
56gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome 40 7.1
57ref|XM_838246.1| Leishmania major strain Friedlin hypothetical p... 40 7.1
58ref|XM_800646.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.1
59emb|AJ843249.1| Physcomitrella patens mRNA for GDSL-like lipase ... 40 7.1
60emb|CR847546.6| Zebrafish DNA sequence from clone CH211-261D5 in... 40 7.1
61gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 7.1
62gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.1
63emb|AL358781.19| Human DNA sequence from clone RP11-334J6 on chr... 40 7.1
64emb|AL139344.24| Human DNA sequence from clone RP1-223H12 on chr... 40 7.1
65emb|BX014754.1|CNS08JJQ Single read from an extremity of a full-... 40 7.1
66emb|Y11547.1|SVSNBDE S.virginiae snbDE gene, partial 40 7.1
67emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 7.1
68dbj|AK134910.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.1
69ref|NM_172000.2| Homo sapiens transmembrane epididymal protein 1... 40 7.1
70emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in... 40 7.1
71gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 7.1
72dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
73dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
74dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
75gb|AE004633.1| Pseudomonas aeruginosa PAO1, section 194 of 529 o... 40 7.1
76dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
77dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
78dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.1
79dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
80dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
81emb|X86533.1|AVALGJ A.vinelandii algJ gene 40 7.1
82emb|AJ515384.2|HSA515384 Homo sapiens mRNA for transmembrane epi... 40 7.1
83gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genom... 40 7.1 
>ref|XM_480031.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2247

 Score =  295 bits (149), Expect = 7e-77
 Identities = 280/321 (87%), Gaps = 2/321 (0%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaagaagaaagtagtggttcttggaactggctgggctggcaccacattcctgaggaatct 262
           |||||||||| | || |||||||| || || |||| ||||||||| ||||||||||||||
Sbjct: 257 aaagaagaaaatcgttgttcttggcaccggttggggtggcaccacgttcctgaggaatct 316

                                                                       
Query: 263 tgatagcaaactgtatgatgtccaggtcatttcacctcggaactactttgcattcacacc 322
           ||| |||| |||||||||||| |||||||||||||||||||| || || |||||||| ||
Sbjct: 317 tgacagcagactgtatgatgttcaggtcatttcacctcggaattatttcgcattcacgcc 376

                                                                       
Query: 323 cttgctcccaagtgttacctgtggaacagttgaaccaaggagtgttgttgagccaatccg 382
           | ||||||||||||| || ||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 377 cctgctcccaagtgtcacttgtgggacagttgagccaaggagcgttgttgagccgattcg 436

                                                                       
Query: 383 taggattctggagaagaaaggtggagacttcaaattctgggaagcagagtgcttcaagat 442
           ||||||| |||||||||||||||||||  ||||||||||||||||||| ||||| |||||
Sbjct: 437 taggattttggagaagaaaggtggagatatcaaattctgggaagcagaatgctttaagat 496

                                                                       
Query: 443 tgatccagcaaacaaaaagattcattgccgcctcaaatgtggggacaaaatcttgatgga 502
           |||| || ||||||| ||||| ||||||||  || ||| | ||||| |||||||||||||
Sbjct: 497 tgattcatcaaacaagaagatccattgccg-gtccaatatagggac-aaatcttgatgga 554

                                
Query: 503 aatggagagttcttagttgac 523
           ||||| || ||||| ||||||
Sbjct: 555 aatggcgaattcttggttgac 575



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/129 (85%), Gaps = 6/129 (4%)
 Strand = Plus / Plus

                                                                       
Query: 50  gatgaggtggacggcgttcgcgtgggagagcgcgtcccgggccttcaacaaccgccccac 109
           |||||||||||||||||||  ||||||| |||||||  |||| |||||| ||||||||||
Sbjct: 92  gatgaggtggacggcgttcatgtgggagggcgcgtcgagggcgttcaaccaccgccccac 151

                                                                       
Query: 110 cttcaccggcctcgtcgtcgtcct---cgccgcaagtagtggaggaggcctcgtcgcata 166
           |||||||  ||||||| |||||||   |||||| ||||||||||||   || || |||||
Sbjct: 152 cttcaccaacctcgtcctcgtcctcggcgccgccagtagtggagga---ctagtagcata 208

                    
Query: 167 tgcggattc 175
           |||||||||
Sbjct: 209 tgcggattc 217
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>dbj|AK072710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142K02, full
           insert sequence
          Length = 2323

 Score =  295 bits (149), Expect = 7e-77
 Identities = 280/321 (87%), Gaps = 2/321 (0%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaagaagaaagtagtggttcttggaactggctgggctggcaccacattcctgaggaatct 262
           |||||||||| | || |||||||| || || |||| ||||||||| ||||||||||||||
Sbjct: 334 aaagaagaaaatcgttgttcttggcaccggttggggtggcaccacgttcctgaggaatct 393

                                                                       
Query: 263 tgatagcaaactgtatgatgtccaggtcatttcacctcggaactactttgcattcacacc 322
           ||| |||| |||||||||||| |||||||||||||||||||| || || |||||||| ||
Sbjct: 394 tgacagcagactgtatgatgttcaggtcatttcacctcggaattatttcgcattcacgcc 453

                                                                       
Query: 323 cttgctcccaagtgttacctgtggaacagttgaaccaaggagtgttgttgagccaatccg 382
           | ||||||||||||| || ||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 454 cctgctcccaagtgtcacttgtgggacagttgagccaaggagcgttgttgagccgattcg 513

                                                                       
Query: 383 taggattctggagaagaaaggtggagacttcaaattctgggaagcagagtgcttcaagat 442
           ||||||| |||||||||||||||||||  ||||||||||||||||||| ||||| |||||
Sbjct: 514 taggattttggagaagaaaggtggagatatcaaattctgggaagcagaatgctttaagat 573

                                                                       
Query: 443 tgatccagcaaacaaaaagattcattgccgcctcaaatgtggggacaaaatcttgatgga 502
           |||| || ||||||| ||||| ||||||||  || ||| | ||||| |||||||||||||
Sbjct: 574 tgattcatcaaacaagaagatccattgccg-gtccaatatagggac-aaatcttgatgga 631

                                
Query: 503 aatggagagttcttagttgac 523
           ||||| || ||||| ||||||
Sbjct: 632 aatggcgaattcttggttgac 652



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/129 (85%), Gaps = 6/129 (4%)
 Strand = Plus / Plus

                                                                       
Query: 50  gatgaggtggacggcgttcgcgtgggagagcgcgtcccgggccttcaacaaccgccccac 109
           |||||||||||||||||||  ||||||| |||||||  |||| |||||| ||||||||||
Sbjct: 169 gatgaggtggacggcgttcatgtgggagggcgcgtcgagggcgttcaaccaccgccccac 228

                                                                       
Query: 110 cttcaccggcctcgtcgtcgtcct---cgccgcaagtagtggaggaggcctcgtcgcata 166
           |||||||  ||||||| |||||||   |||||| ||||||||||||   || || |||||
Sbjct: 229 cttcaccaacctcgtcctcgtcctcggcgccgccagtagtggagga---ctagtagcata 285

                    
Query: 167 tgcggattc 175
           |||||||||
Sbjct: 286 tgcggattc 294
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  198 bits (100), Expect = 1e-47
 Identities = 172/196 (87%)
 Strand = Plus / Minus

                                                                           
Query: 203     aaagaagaaagtagtggttcttggaactggctgggctggcaccacattcctgaggaatct 262
               |||||||||| | || |||||||| || || |||| ||||||||| ||||||||||||||
Sbjct: 2307282 aaagaagaaaatcgttgttcttggcaccggttggggtggcaccacgttcctgaggaatct 2307223

                                                                           
Query: 263     tgatagcaaactgtatgatgtccaggtcatttcacctcggaactactttgcattcacacc 322
               ||| |||| |||||||||||| |||||||||||||||||||| || || |||||||| ||
Sbjct: 2307222 tgacagcagactgtatgatgttcaggtcatttcacctcggaattatttcgcattcacgcc 2307163

                                                                           
Query: 323     cttgctcccaagtgttacctgtggaacagttgaaccaaggagtgttgttgagccaatccg 382
               | ||||||||||||| || ||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 2307162 cctgctcccaagtgtcacttgtgggacagttgagccaaggagcgttgttgagccgattcg 2307103

                               
Query: 383     taggattctggagaag 398
               ||||||| ||||||||
Sbjct: 2307102 taggattttggagaag 2307087



 Score =  101 bits (51), Expect = 2e-18
 Identities = 110/127 (86%), Gaps = 2/127 (1%)
 Strand = Plus / Minus

                                                                           
Query: 397     agaaaggtggagacttcaaattctgggaagcagagtgcttcaagattgatccagcaaaca 456
               |||||||||||||  ||||||||||||||||||| ||||| ||||||||| || ||||||
Sbjct: 2306726 agaaaggtggagatatcaaattctgggaagcagaatgctttaagattgattcatcaaaca 2306667

                                                                           
Query: 457     aaaagattcattgccgcctcaaatgtggggacaaaatcttgatggaaatggagagttctt 516
               | ||||| ||||||||  || ||| | ||||| |||||||||||||||||| || |||||
Sbjct: 2306666 agaagatccattgccg-gtccaatatagggac-aaatcttgatggaaatggcgaattctt 2306609

                      
Query: 517     agttgac 523
                ||||||
Sbjct: 2306608 ggttgac 2306602



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                           
Query: 50      gatgaggtggacggcgttcgcgtgggagagcgcgtcccgggccttcaacaaccgccccac 109
               |||||||||||||||||||  ||||||| |||||||  |||| |||||| ||||||||||
Sbjct: 2308750 gatgaggtggacggcgttcatgtgggagggcgcgtcgagggcgttcaaccaccgccccac 2308691

                                         
Query: 110     cttcaccggcctcgtcgtcgtcctcg 135
               |||||||  ||||||| |||||||||
Sbjct: 2308690 cttcaccaacctcgtcctcgtcctcg 2308665
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>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473D02
          Length = 146185

 Score =  198 bits (100), Expect = 1e-47
 Identities = 172/196 (87%)
 Strand = Plus / Minus

                                                                         
Query: 203   aaagaagaaagtagtggttcttggaactggctgggctggcaccacattcctgaggaatct 262
             |||||||||| | || |||||||| || || |||| ||||||||| ||||||||||||||
Sbjct: 54781 aaagaagaaaatcgttgttcttggcaccggttggggtggcaccacgttcctgaggaatct 54722

                                                                         
Query: 263   tgatagcaaactgtatgatgtccaggtcatttcacctcggaactactttgcattcacacc 322
             ||| |||| |||||||||||| |||||||||||||||||||| || || |||||||| ||
Sbjct: 54721 tgacagcagactgtatgatgttcaggtcatttcacctcggaattatttcgcattcacgcc 54662

                                                                         
Query: 323   cttgctcccaagtgttacctgtggaacagttgaaccaaggagtgttgttgagccaatccg 382
             | ||||||||||||| || ||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 54661 cctgctcccaagtgtcacttgtgggacagttgagccaaggagcgttgttgagccgattcg 54602

                             
Query: 383   taggattctggagaag 398
             ||||||| ||||||||
Sbjct: 54601 taggattttggagaag 54586



 Score =  101 bits (51), Expect = 2e-18
 Identities = 110/127 (86%), Gaps = 2/127 (1%)
 Strand = Plus / Minus

                                                                         
Query: 397   agaaaggtggagacttcaaattctgggaagcagagtgcttcaagattgatccagcaaaca 456
             |||||||||||||  ||||||||||||||||||| ||||| ||||||||| || ||||||
Sbjct: 54225 agaaaggtggagatatcaaattctgggaagcagaatgctttaagattgattcatcaaaca 54166

                                                                         
Query: 457   aaaagattcattgccgcctcaaatgtggggacaaaatcttgatggaaatggagagttctt 516
             | ||||| ||||||||  || ||| | ||||| |||||||||||||||||| || |||||
Sbjct: 54165 agaagatccattgccg-gtccaatatagggac-aaatcttgatggaaatggcgaattctt 54108

                    
Query: 517   agttgac 523
              ||||||
Sbjct: 54107 ggttgac 54101



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 50    gatgaggtggacggcgttcgcgtgggagagcgcgtcccgggccttcaacaaccgccccac 109
             |||||||||||||||||||  ||||||| |||||||  |||| |||||| ||||||||||
Sbjct: 56249 gatgaggtggacggcgttcatgtgggagggcgcgtcgagggcgttcaaccaccgccccac 56190

                                       
Query: 110   cttcaccggcctcgtcgtcgtcctcg 135
             |||||||  ||||||| |||||||||
Sbjct: 56189 cttcaccaacctcgtcctcgtcctcg 56164
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>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1368_G08
          Length = 107074

 Score =  198 bits (100), Expect = 1e-47
 Identities = 172/196 (87%)
 Strand = Plus / Minus

                                                                          
Query: 203    aaagaagaaagtagtggttcttggaactggctgggctggcaccacattcctgaggaatct 262
              |||||||||| | || |||||||| || || |||| ||||||||| ||||||||||||||
Sbjct: 105409 aaagaagaaaatcgttgttcttggcaccggttggggtggcaccacgttcctgaggaatct 105350

                                                                          
Query: 263    tgatagcaaactgtatgatgtccaggtcatttcacctcggaactactttgcattcacacc 322
              ||| |||| |||||||||||| |||||||||||||||||||| || || |||||||| ||
Sbjct: 105349 tgacagcagactgtatgatgttcaggtcatttcacctcggaattatttcgcattcacgcc 105290

                                                                          
Query: 323    cttgctcccaagtgttacctgtggaacagttgaaccaaggagtgttgttgagccaatccg 382
              | ||||||||||||| || ||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 105289 cctgctcccaagtgtcacttgtgggacagttgagccaaggagcgttgttgagccgattcg 105230

                              
Query: 383    taggattctggagaag 398
              ||||||| ||||||||
Sbjct: 105229 taggattttggagaag 105214



 Score =  101 bits (51), Expect = 2e-18
 Identities = 110/127 (86%), Gaps = 2/127 (1%)
 Strand = Plus / Minus

                                                                          
Query: 397    agaaaggtggagacttcaaattctgggaagcagagtgcttcaagattgatccagcaaaca 456
              |||||||||||||  ||||||||||||||||||| ||||| ||||||||| || ||||||
Sbjct: 104853 agaaaggtggagatatcaaattctgggaagcagaatgctttaagattgattcatcaaaca 104794

                                                                          
Query: 457    aaaagattcattgccgcctcaaatgtggggacaaaatcttgatggaaatggagagttctt 516
              | ||||| ||||||||  || ||| | ||||| |||||||||||||||||| || |||||
Sbjct: 104793 agaagatccattgccg-gtccaatatagggac-aaatcttgatggaaatggcgaattctt 104736

                     
Query: 517    agttgac 523
               ||||||
Sbjct: 104735 ggttgac 104729



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                          
Query: 50     gatgaggtggacggcgttcgcgtgggagagcgcgtcccgggccttcaacaaccgccccac 109
              |||||||||||||||||||  ||||||| |||||||  |||| |||||| ||||||||||
Sbjct: 106877 gatgaggtggacggcgttcatgtgggagggcgcgtcgagggcgttcaaccaccgccccac 106818

                                        
Query: 110    cttcaccggcctcgtcgtcgtcctcg 135
              |||||||  ||||||| |||||||||
Sbjct: 106817 cttcaccaacctcgtcctcgtcctcg 106792
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>dbj|AK100884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127O13, full
           insert sequence
          Length = 2052

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 294 tcacctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagtt 353
           |||||||| ||||| ||| | |||||||| ||| | || ||||| || ||||| ||||||
Sbjct: 284 tcacctcgcaactattttaccttcacacctttgttgcctagtgtgacatgtggcacagtt 343

                                                                       
Query: 354 gaaccaaggagtgttgttgagccaatccgtaggattctggagaagaaaggtggagacttc 413
           ||| || | ||| |||| ||||| |||||||  ||| ||   |||| ||| || |  || 
Sbjct: 344 gaagcacgtagtattgtagagcctatccgtaatattgtgagaaagagaggcggcgcattt 403

                                                             
Query: 414 aaattctgggaagcagagtgcttcaagattgatccagcaaacaaaaagat 463
           | ||| |||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 404 agattttgggaagcagagtgctacaagattgatccaactaacaaaaagat 453
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>ref|NM_116741.2| Arabidopsis thaliana calcium ion binding / disulfide oxidoreductase
           AT4G05020 mRNA, complete cds
          Length = 2179

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
           ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 322 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 381

                               
Query: 357 ccaaggagtgttgttgagcc 376
            |  | ||||||||||||||
Sbjct: 382 gctcgtagtgttgttgagcc 401
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>gb|AC105320.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1675_H07,
             complete sequence
          Length = 135294

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 420   tgggaagcagagtgcttcaagattgatccagcaaacaaaaagat 463
             |||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 56712 tgggaagcagagtgctacaagattgatccaactaacaaaaagat 56669
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>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
            complete sequence
          Length = 168424

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 420  tgggaagcagagtgcttcaagattgatccagcaaacaaaaagat 463
            |||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 7777 tgggaagcagagtgctacaagattgatccaactaacaaaaagat 7734
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>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
          Length = 198563

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                          
Query: 297    cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
              ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 105421 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 105480

                                  
Query: 357    ccaaggagtgttgttgagcc 376
               |  | ||||||||||||||
Sbjct: 105481 gctcgtagtgttgttgagcc 105500
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>gb|AY039856.1| Arabidopsis thaliana AT4g05020/T32N4_4 mRNA, complete cds
          Length = 2179

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
           ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 322 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 381

                               
Query: 357 ccaaggagtgttgttgagcc 376
            |  | ||||||||||||||
Sbjct: 382 gctcgtagtgttgttgagcc 401
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 420      tgggaagcagagtgcttcaagattgatccagcaaacaaaaagat 463
                |||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 15352755 tgggaagcagagtgctacaagattgatccaactaacaaaaagat 15352712
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>emb|BX827398.1|CNS0A2CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZC05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2032

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
           ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 273 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 332

                               
Query: 357 ccaaggagtgttgttgagcc 376
            |  | ||||||||||||||
Sbjct: 333 gctcgtagtgttgttgagcc 352
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>gb|BT002241.1| Arabidopsis thaliana At4g05020/T32N4_4 mRNA, complete cds
          Length = 1749

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
           ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 265 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 324

                               
Query: 357 ccaaggagtgttgttgagcc 376
            |  | ||||||||||||||
Sbjct: 325 gctcgtagtgttgttgagcc 344
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>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
              complete sequence
          Length = 183147

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 297    cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
              ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 147688 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 147629

                                  
Query: 357    ccaaggagtgttgttgagcc 376
               |  | ||||||||||||||
Sbjct: 147628 gctcgtagtgttgttgagcc 147609
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>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
          Length = 80196

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 297   cctcggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttgaa 356
             ||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||||
Sbjct: 43896 cctcggaactactttgctttcactcctttactacctagtgttacttgtggaactgttgaa 43955

                                 
Query: 357   ccaaggagtgttgttgagcc 376
              |  | ||||||||||||||
Sbjct: 43956 gctcgtagtgttgttgagcc 43975
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>ref|NM_118269.2| Arabidopsis thaliana NADH dehydrogenase AT4G21490 mRNA, complete
           cds
          Length = 1707

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 276 tatgatgtccaggtcatttcacctcggaactactttgcattcacacccttgctcccaagt 335
           ||||| || ||||| || || ||||| ||||||||||| ||||| |||||| | || |||
Sbjct: 199 tatgaggttcaggttatatctcctcgaaactactttgctttcactcccttgttacctagt 258

                                
Query: 336 gttacctgtggaacagttgaa 356
           ||||| |||||||| ||||||
Sbjct: 259 gttacttgtggaactgttgaa 279
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>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 276   tatgatgtccaggtcatttcacctcggaactactttgcattcacacccttgctcccaagt 335
             ||||| || ||||| || || ||||| ||||||||||| ||||| |||||| | || |||
Sbjct: 56625 tatgaggttcaggttatatctcctcgaaactactttgctttcactcccttgttacctagt 56566

                                  
Query: 336   gttacctgtggaacagttgaa 356
             ||||| |||||||| ||||||
Sbjct: 56565 gttacttgtggaactgttgaa 56545
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>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project)
          Length = 95266

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 276   tatgatgtccaggtcatttcacctcggaactactttgcattcacacccttgctcccaagt 335
             ||||| || ||||| || || ||||| ||||||||||| ||||| |||||| | || |||
Sbjct: 43617 tatgaggttcaggttatatctcctcgaaactactttgctttcactcccttgttacctagt 43558

                                  
Query: 336   gttacctgtggaacagttgaa 356
             ||||| |||||||| ||||||
Sbjct: 43557 gttacttgtggaactgttgaa 43537
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 204      aagaagaaagtagtggttcttggaactggctgggctgg 241
                |||||||| || ||||||||||| ||||||||||||||
Sbjct: 28124379 aagaagaaggttgtggttcttgggactggctgggctgg 28124342
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>gb|AY086046.1| Arabidopsis thaliana clone 20805 mRNA, complete sequence
          Length = 1958

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 209 aagaagaaagtagttgttcttgggactggatgggctgg 246
to top
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 204   aagaagaaagtagtggttcttggaactggctgggctgg 241
             |||||||| || ||||||||||| ||||||||||||||
Sbjct: 55285 aagaagaaggttgtggttcttgggactggctgggctgg 55248
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>dbj|AK103572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132N13, full
           insert sequence
          Length = 2764

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||| || ||||||||||| ||||||||||||||
Sbjct: 439 aagaagaaggttgtggttcttgggactggctgggctgg 476
to top
>dbj|AK102878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112G02, full
           insert sequence
          Length = 2285

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||| || ||||||||||| ||||||||||||||
Sbjct: 293 aagaagaaggttgtggttcttgggactggctgggctgg 330
to top
>emb|AJ245862.1|STU245862 Solanum tuberosum mRNA for external rotenone-insensitive NADPH
           dehydrogenase (ndb1 gene)
          Length = 2050

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 300 cggaactactttgcattcacacccttgctcccaagtgttacctgtggaacagttga 355
           |||||||| |||||||| ||||| ||| | || ||||| || ||||||||||||||
Sbjct: 324 cggaactattttgcatttacaccattgttacctagtgtcacatgtggaacagttga 379



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 415 aattctgggaagcagagtgcttcaagattgatccagcaaac 455
           |||||||||||||||| ||  | ||||||||||||| ||||
Sbjct: 439 aattctgggaagcagaatgtctgaagattgatccagtaaac 479
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 114     accggcctcgtcgtcgtcctcgcc 137
               ||||||||||||||||||||||||
Sbjct: 2573498 accggcctcgtcgtcgtcctcgcc 2573521
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>ref|XM_538779.2| PREDICTED: Canis familiaris similar to Kruppel-like factor 4 (Gut
           enriched kruppel-like factor) (Epithelial zinc-finger
           protein EZF) (LOC481657), mRNA
          Length = 1173

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 116 cggcctcgtcgtcgtcctcgccg 138
           |||||||||||||||||||||||
Sbjct: 356 cggcctcgtcgtcgtcctcgccg 378
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>ref|NM_118962.3| Arabidopsis thaliana NADH dehydrogenase/ disulfide oxidoreductase
           AT4G28220 mRNA, complete cds
          Length = 4493

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 226 aagaagaaagtagttgtgcttgggactggttgggctgg 263
to top
>gb|BT025339.1| Arabidopsis thaliana At4g28220 mRNA, complete cds
          Length = 1716

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 145 aagaagaaagtagttgtgcttgggactggttgggctgg 182
to top
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 204    aagaagaaagtagtggttcttggaactggctgggctgg 241
              |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 108970 aagaagaaagtagttgtgcttgggactggttgggctgg 109007
to top
>emb|BX828330.1|CNS0A2WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH77ZE08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1849

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 177 aagaagaaagtagttgtgcttgggactggttgggctgg 214
to top
>emb|BX828002.1|CNS0A29V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH43ZA11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1926

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 204 aagaagaaagtagtggttcttggaactggctgggctgg 241
           |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 226 aagaagaaagtagttgtgcttgggactggttgggctgg 263
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 67      tcgcgtgggagagcgcgtcccg 88
               ||||||||||||||||||||||
Sbjct: 3855113 tcgcgtgggagagcgcgtcccg 3855092
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>gb|AY106876.1| Zea mays PCO100812 mRNA sequence
          Length = 2361

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                       
Query: 274 tgtatgatgtccaggtcatttcacctcggaactactttgcattcacacccttgctcccaa 333
           ||||||||||||| ||  | |||||||| || |||||  | ||||| || ||| | ||||
Sbjct: 381 tgtatgatgtccatgtggtatcacctcgcaattacttcaccttcactcctttgttgccaa 440

                                                         
Query: 334 gtgttacctgtggaacagttgaaccaaggagtgttgttgagccaat 379
           |||| || ||||| ||||||||| || | ||| |||| ||||||||
Sbjct: 441 gtgtgacatgtggcacagttgaagcacgtagtattgtggagccaat 486
to top
>ref|XM_463859.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1727

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 119 cctcgtcgtcgtcctcgccgc 139
           |||||||||||||||||||||
Sbjct: 41  cctcgtcgtcgtcctcgccgc 61
to top
>ref|XM_506680.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1399_H05.34
           mRNA
          Length = 1735

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 119 cctcgtcgtcgtcctcgccgc 139
           |||||||||||||||||||||
Sbjct: 42  cctcgtcgtcgtcctcgccgc 62
to top
>gb|BT013752.1| Lycopersicon esculentum clone 132615R, mRNA sequence
          Length = 2079

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 415 aattctgggaagcagagtgcttcaagattgatccagcaaac 455
           |||||||||||||||| ||  | ||||||||||||| ||||
Sbjct: 475 aattctgggaagcagaatgtctgaagattgatccagaaaac 515
to top
>gb|AC087774.27| Homo sapiens 12p BAC RP11-633O13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    gattgatccagcaaacaaaaa 460
              |||||||||||||||||||||
Sbjct: 105524 gattgatccagcaaacaaaaa 105544
to top
>dbj|AK016606.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933401L05 product:unclassifiable, full
           insert sequence
          Length = 1337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 175 ctcagccggaccagccccaaggatt 199
           |||||||||||||||||| ||||||
Sbjct: 26  ctcagccggaccagccccgaggatt 2
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctcgtcgtcgtcctcgccgc 139
              |||||||||||||||||||||
Sbjct: 772058 cctcgtcgtcgtcctcgccgc 772038
to top
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   cctcgtcgtcgtcctcgccgc 139
             |||||||||||||||||||||
Sbjct: 50189 cctcgtcgtcgtcctcgccgc 50169
to top
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1399_H05
          Length = 147670

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    cctcgtcgtcgtcctcgccgc 139
              |||||||||||||||||||||
Sbjct: 128953 cctcgtcgtcgtcctcgccgc 128933
to top
>dbj|AK073508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O22, full
           insert sequence
          Length = 1736

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 119 cctcgtcgtcgtcctcgccgc 139
           |||||||||||||||||||||
Sbjct: 42  cctcgtcgtcgtcctcgccgc 62
to top
>dbj|AK061078.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E09, full
           insert sequence
          Length = 1727

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 119 cctcgtcgtcgtcctcgccgc 139
           |||||||||||||||||||||
Sbjct: 41  cctcgtcgtcgtcctcgccgc 61
to top
>dbj|D10985.1|RICCBP3 Oryza sativa (japonica cultivar-group) cbp3 gene for serine
            carboxypeptidase III, complete cds
          Length = 7945

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 119  cctcgtcgtcgtcctcgccgc 139
            |||||||||||||||||||||
Sbjct: 2091 cctcgtcgtcgtcctcgccgc 2111
to top
>ref|NM_188734.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 cctcgtcgtcgtcctcgccg 138
           ||||||||||||||||||||
Sbjct: 304 cctcgtcgtcgtcctcgccg 285
to top
>ref|NM_184912.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1122

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 cggcctcgtcgtcgtcctcg 135
           ||||||||||||||||||||
Sbjct: 303 cggcctcgtcgtcgtcctcg 322
to top
>ref|XM_478877.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 6102

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 115  ccggcctcgtcgtcgtcctcgccg 138
            ||||||||||| ||||||||||||
Sbjct: 2549 ccggcctcgtcttcgtcctcgccg 2572
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    cctcgtcgtcgtcctcgccg 138
              ||||||||||||||||||||
Sbjct: 955521 cctcgtcgtcgtcctcgccg 955502
to top
>gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, complete sequence
          Length = 216410

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    accagccccaaggatttaaaaaga 207
              |||||||||||||| |||||||||
Sbjct: 199345 accagccccaaggagttaaaaaga 199322
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>gb|AC120375.11| Mus musculus chromosome 14, clone RP24-123H11, complete sequence
          Length = 158760

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   accagccccaaggatttaaaaaga 207
             |||||||||||||| |||||||||
Sbjct: 49943 accagccccaaggagttaaaaaga 49920
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>ref|XM_365940.1| Magnaporthe grisea 70-15 hypothetical protein (MG10160.4) partial
           mRNA
          Length = 567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 cctcgtcgtcgtcctcgccg 138
           ||||||||||||||||||||
Sbjct: 511 cctcgtcgtcgtcctcgccg 492
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>gb|AY658848.1| Synthetic construct Peudomonas aeruginosa clone FLH042336.01F
           PA2064 gene, partial cds
          Length = 978

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 gcctcgtcgtcgtcctcgcc 137
           ||||||||||||||||||||
Sbjct: 944 gcctcgtcgtcgtcctcgcc 925
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 116      cggcctcgtcgtcgtcctcg 135
                ||||||||||||||||||||
Sbjct: 31892762 cggcctcgtcgtcgtcctcg 31892781
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>gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, complete sequence
          Length = 159624

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   aaggatttaaaaagaagaaa 212
             ||||||||||||||||||||
Sbjct: 52879 aaggatttaaaaagaagaaa 52860
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>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome
          Length = 359853

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aggatttaaaaagaagaaag 213
              ||||||||||||||||||||
Sbjct: 275573 aggatttaaaaagaagaaag 275554
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>ref|XM_838246.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1163)
            partial mRNA
          Length = 2760

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  cctcgtcgtcgtcctcgccg 138
            ||||||||||||||||||||
Sbjct: 1132 cctcgtcgtcgtcctcgccg 1113
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>ref|XM_800646.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503477.10) partial mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 tcgtcgtcgtcctcgccgca 140
           ||||||||||||||||||||
Sbjct: 67  tcgtcgtcgtcctcgccgca 48
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>emb|AJ843249.1| Physcomitrella patens mRNA for GDSL-like lipase precursor (gdslll
            gene)
          Length = 1752

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  gacttcaaattctgggaagc 427
            ||||||||||||||||||||
Sbjct: 1327 gacttcaaattctgggaagc 1346
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>emb|CR847546.6| Zebrafish DNA sequence from clone CH211-261D5 in linkage group 1,
             complete sequence
          Length = 147811

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   taaaaagaagaaagtagtggttct 223
             |||||| |||||||||||||||||
Sbjct: 47845 taaaaaaaagaaagtagtggttct 47822
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   cggcctcgtcgtcgtcctcg 135
             ||||||||||||||||||||
Sbjct: 46511 cggcctcgtcgtcgtcctcg 46530
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cggcctcgtcgtcgtcctcg 135
               ||||||||||||||||||||
Sbjct: 2722969 cggcctcgtcgtcgtcctcg 2722988
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>emb|AL358781.19| Human DNA sequence from clone RP11-334J6 on chromosome 9 Contains the
             3' end of the gene for a novel protein (KIAA0515), the
             RNU62 gene for U62 small nucleolar RNA, a novel gene
             identical to the RNU62 gene, the POMT1 gene for
             protein-O-mannosyltransferase 1, a novel gene, the gene
             for uridine-cytidine kinase 1 (UCK1) and three CpG
             islands, complete sequence
          Length = 147492

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   ttcaaattctgggaagcaga 430
             ||||||||||||||||||||
Sbjct: 42102 ttcaaattctgggaagcaga 42083
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>emb|AL139344.24| Human DNA sequence from clone RP1-223H12 on chromosome 1q25.1-25.3
             Contains the GLUL gene for glutamate-ammonia ligase
             (glutamine synthase), the gene for putative membrane
             protein HE9 (HE9), a novel gene (LOC388719), a  membrane
             protein family pseudogene, the RGSL2 gene for regulator of
             G-protein signalling like 2, the 5' end of the RGSL1 gene
             for regulator of G-protein signalling like 1 and a CpG
             island, complete sequence
          Length = 152057

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ggaggaagatgaggtggacg 62
             ||||||||||||||||||||
Sbjct: 56260 ggaggaagatgaggtggacg 56279
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>emb|BX014754.1|CNS08JJQ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA22AG08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 890

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 cctcgtcgtcgtcctcgccg 138
           ||||||||||||||||||||
Sbjct: 842 cctcgtcgtcgtcctcgccg 823
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>emb|Y11547.1|SVSNBDE S.virginiae snbDE gene, partial
          Length = 5994

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 115  ccggcctcgtcgtcgtcctcgccg 138
            |||||||||||||||||| |||||
Sbjct: 2194 ccggcctcgtcgtcgtccccgccg 2217
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cggcctcgtcgtcgtcctcg 135
              ||||||||||||||||||||
Sbjct: 146529 cggcctcgtcgtcgtcctcg 146548
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>dbj|AK134910.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430514P08
           product:unclassifiable, full insert sequence
          Length = 2920

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 184 accagccccaaggatttaaaaaga 207
           |||||||||||||| |||||||||
Sbjct: 875 accagccccaaggagttaaaaaga 898
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>ref|NM_172000.2| Homo sapiens transmembrane epididymal protein 1 (TEDDM1), mRNA
          Length = 2338

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  ggaggaagatgaggtggacg 62
           ||||||||||||||||||||
Sbjct: 999 ggaggaagatgaggtggacg 980
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>emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in linkage group 15,
              complete sequence
          Length = 248279

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ggaggaagagcaaagcgtac 36
              ||||||||||||||||||||
Sbjct: 192537 ggaggaagagcaaagcgtac 192518
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    gaggaggcctcgtcgcatatgcgg 171
              |||||||||||||||||| |||||
Sbjct: 125264 gaggaggcctcgtcgcatgtgcgg 125287
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 115      ccggcctcgtcgtcgtcctcgccg 138
                ||||||||||| ||||||||||||
Sbjct: 23444047 ccggcctcgtcttcgtcctcgccg 23444024
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 116      cggcctcgtcgtcgtcctcg 135
                ||||||||||||||||||||
Sbjct: 31983278 cggcctcgtcgtcgtcctcg 31983297
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     cctcgtcgtcgtcctcgccg 138
               ||||||||||||||||||||
Sbjct: 7926256 cctcgtcgtcgtcctcgccg 7926275
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>gb|AE004633.1| Pseudomonas aeruginosa PAO1, section 194 of 529 of the complete
            genome
          Length = 10107

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  gcctcgtcgtcgtcctcgcc 137
            ||||||||||||||||||||
Sbjct: 2765 gcctcgtcgtcgtcctcgcc 2784
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1066G12
          Length = 136263

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctcgtcgtcgtcctcgccg 138
              ||||||||||||||||||||
Sbjct: 121202 cctcgtcgtcgtcctcgccg 121221
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>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1008C01
          Length = 144141

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   cctcgtcgtcgtcctcgccg 138
             ||||||||||||||||||||
Sbjct: 32568 cctcgtcgtcgtcctcgccg 32587
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     ggctggcaccacattcctga 255
               ||||||||||||||||||||
Sbjct: 1076935 ggctggcaccacattcctga 1076954
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>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1301_C12
          Length = 128396

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 115  ccggcctcgtcgtcgtcctcgccg 138
            ||||||||||| ||||||||||||
Sbjct: 4440 ccggcctcgtcttcgtcctcgccg 4417
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>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453G03
          Length = 144480

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ccggcctcgtcgtcgtcctcgccg 138
             ||||||||||| ||||||||||||
Sbjct: 63944 ccggcctcgtcttcgtcctcgccg 63921
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>emb|X86533.1|AVALGJ A.vinelandii algJ gene
          Length = 1740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 98   caaccgccccaccttcaccggcct 121
            ||||||| ||||||||||||||||
Sbjct: 1217 caaccgctccaccttcaccggcct 1240
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>emb|AJ515384.2|HSA515384 Homo sapiens mRNA for transmembrane epididymal protein 1 (TEDDM1
           gene)
          Length = 2338

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  ggaggaagatgaggtggacg 62
           ||||||||||||||||||||
Sbjct: 999 ggaggaagatgaggtggacg 980
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>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
             sequence
          Length = 150663

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   cggcctcgtcgtcgtcctcg 135
             ||||||||||||||||||||
Sbjct: 94015 cggcctcgtcgtcgtcctcg 94034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,519,233
Number of Sequences: 3902068
Number of extensions: 5519233
Number of successful extensions: 123082
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122205
Number of HSP's gapped (non-prelim): 868
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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