>PKNF_MYCTU (P72003) Probable serine/threonine-protein kinase pknF (EC|
           2.7.11.1)
          Length = 476

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +2

Query: 158 QSSQPWPSTCLRCCFLCTSVASCTLNHQAPRLPSASTIPWTSSASTTTSVRLHGFVKYPT 337
           +++QP  +         TSVA  +    AP  P+ +    T++AS T +V   G + +P 
Sbjct: 336 RAAQPARTRTTTSAGTTTSVAPASTTRPAPTTPTTTGAADTATASPTAAVVAIGALCFPL 395

Query: 338 GKTDDPKNYVT 370
           G T   K   T
Sbjct: 396 GSTGTTKTGAT 406

>PKNF_MYCBO (Q7TZN1) Probable serine/threonine-protein kinase pknF (EC|
           2.7.11.1)
          Length = 476

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +2

Query: 158 QSSQPWPSTCLRCCFLCTSVASCTLNHQAPRLPSASTIPWTSSASTTTSVRLHGFVKYPT 337
           +++QP  +         TSVA  +    AP  P+ +    T++AS T +V   G + +P 
Sbjct: 336 RAAQPARTRTTTSAGTTTSVAPASTTRPAPTTPTTTGAADTATASPTAAVVAIGALCFPL 395

Query: 338 GKTDDPKNYVT 370
           G T   K   T
Sbjct: 396 GSTGTTKTGAT 406

>YPX5_CAEEL (Q09277) Hypothetical protein F40H6.5|
          Length = 1216

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/75 (29%), Positives = 29/75 (38%)
 Frame = +2

Query: 152  RAQSSQPWPSTCLRCCFLCTSVASCTLNHQAPRLPSASTIPWTSSASTTTSVRLHGFVKY 331
            R+ ++   PST L       S  S TL      +PS S IP TS+    TS  L      
Sbjct: 816  RSHTTTVEPSTPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 875

Query: 332  PTGKTDDPKNYVTVS 376
             +  T+      T S
Sbjct: 876  TSSSTESTTTSPTTS 890

>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)|
          Length = 831

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
 Frame = +2

Query: 68  GSVEVPSVGAASTSPPSASHLLELLLWGRAQS--SQPWPSTCLRCCFLCTSVASCTLNHQ 241
           GS +V    A    PP+  HLL+  LW   Q      +   C+ C    T +AS     +
Sbjct: 531 GSPQVTFQPAVLNEPPTEDHLLQNTLWPEIQKLYGHGYEIVCVACNNSKTLLASAC---K 587

Query: 242 APRLPSASTIPW-TSSASTTTSVRLHGFVKYPTGKTDDPKNYVTVS 376
           A +   A+ I W T+S     S+  H         + D K  + VS
Sbjct: 588 ASQKEHAAIILWSTASWKQVQSLAFHTLTVTQMTFSPDDKFLLAVS 633

>NHR22_CAEEL (Q09587) Nuclear hormone receptor family member nhr-22|
          Length = 579

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +2

Query: 98  ASTSPPSASHLLELLLWGRAQSS---QPWPSTCLRCCFLCTSVASCTLN 235
           +S+ PP ++HL E++   +A +S    P P T  R C +C+S  + TL+
Sbjct: 62  SSSPPPESNHLPEIV--NKASTSPRGMPSPLTDSRSCHVCSSPTANTLH 108

>PAPOA_HUMAN (P51003) Poly(A) polymerase alpha (EC 2.7.7.19) (PAP)|
           (Polynucleotide adenylyltransferase alpha)
          Length = 744

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = -2

Query: 228 VHEATEVHKKQQRKQVDGHGWEL*ARPHSSSSKRCEADGGEVDAAPTDGTSTDPVMAQGW 49
           +H+    H  Q++K+    G +L A   SS     ++D      +PT  T T P+ + G 
Sbjct: 492 LHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGS 551

Query: 48  LEAEQAGAAGMRPTS 4
            +   + A  +   S
Sbjct: 552 SQGRNSPAPAVTAAS 566

>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
          Length = 860

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = +2

Query: 65  TGSVEVPSVGAASTSPPSASHLLELLLWGRAQSSQPW-------PSTCLRCCFLCTSVAS 223
           TGS  + +V   S  PPS +      +  R+ S++P        PST +       S ++
Sbjct: 396 TGSTSIETVTTRSQEPPSTT------ISTRSASTEPVTTRSQEPPSTTIS----TRSAST 445

Query: 224 CTLNHQAPRLPSASTIPWTSSASTTTS 304
            T+  ++   PS +   W++S  T+TS
Sbjct: 446 ETVTTRSQEPPSTTISTWSASTETSTS 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,494,374
Number of Sequences: 219361
Number of extensions: 1231166
Number of successful extensions: 4514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4511
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)