ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags21b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLH12_RAT (Q8R2H4) Kelch-like protein 12 (CUL3-interacting prote... 31 2.3
2KLH12_MOUSE (Q8BZM0) Kelch-like protein 12 (CUL3-interacting pro... 31 2.3
3KLH12_HUMAN (Q53G59) Kelch-like protein 12 (CUL3-interacting pro... 31 2.3

>KLH12_RAT (Q8R2H4) Kelch-like protein 12 (CUL3-interacting protein 1)|
          Length = 568

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 105 FLILETVGTILKNMM*YPPS*CITRKLNVNIERSIEFLSSIL*-CKCLGTSIFKHNHNTV 281
           F+  ETV   ++N+    P+ C+ +   V  +   EFL S L    CLG   F   HN V
Sbjct: 90  FVYTETVHVTVENVQELLPAACLLQLKGVK-QACCEFLESQLDPSNCLGIRDFAETHNCV 148

Query: 282 DL 287
           DL
Sbjct: 149 DL 150



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>KLH12_MOUSE (Q8BZM0) Kelch-like protein 12 (CUL3-interacting protein 1)|
          Length = 568

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 105 FLILETVGTILKNMM*YPPS*CITRKLNVNIERSIEFLSSIL*-CKCLGTSIFKHNHNTV 281
           F+  ETV   ++N+    P+ C+ +   V  +   EFL S L    CLG   F   HN V
Sbjct: 90  FVYTETVHVTVENVQELLPAACLLQLKGVK-QACCEFLESQLDPSNCLGIRDFAETHNCV 148

Query: 282 DL 287
           DL
Sbjct: 149 DL 150



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>KLH12_HUMAN (Q53G59) Kelch-like protein 12 (CUL3-interacting protein 1)|
          Length = 568

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 105 FLILETVGTILKNMM*YPPS*CITRKLNVNIERSIEFLSSIL*-CKCLGTSIFKHNHNTV 281
           F+  ETV   ++N+    P+ C+ +   V  +   EFL S L    CLG   F   HN V
Sbjct: 90  FVYTETVHVTVENVQELLPAACLLQLKGVK-QACCEFLESQLDPSNCLGIRDFAETHNCV 148

Query: 282 DL 287
           DL
Sbjct: 149 DL 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,712,766
Number of Sequences: 219361
Number of extensions: 1072559
Number of successful extensions: 2140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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