ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20m03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168
2gb|BT017270.1| Zea mays clone EL01N0312E10.c mRNA sequence 464 e-127
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 430 e-117
4gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 430 e-117
5gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 430 e-117
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 430 e-117
7gb|AY109412.1| Zea mays CL3751_1 mRNA sequence 396 e-107
8gb|DQ226613.1| Boechera divaricarpa isolate SLW-3-G03 mRNA sequence 70 9e-09
9ref|NM_124662.2| Arabidopsis thaliana oxidoreductase, acting on ... 62 2e-06
10gb|AY079117.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, comp... 62 2e-06
11gb|AY054251.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, comp... 62 2e-06
12emb|BX833220.1|CNS0A1UY Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
13dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.008
14gb|AF439273.1|AF439273 Retama raetam NADH-ubiquinone oxidoreduct... 44 0.49
15ref|XM_958190.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.9
16ref|XM_329456.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.9
17gb|AE009357.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.9
18gb|AE008255.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.9
19gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.9
20gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase ... 42 1.9
21gb|AE005962.1| Caulobacter crescentus CB15 section 288 of 359 of... 42 1.9
22gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA,... 42 1.9
23gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 o... 42 1.9
24emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.9
25ref|XM_464309.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
26ref|NM_001016021.2| Xenopus tropicalis hypothetical protein LOC5... 40 7.6
27gb|BC085002.1| Xenopus tropicalis cDNA clone IMAGE:7029264 40 7.6
28gb|BC084194.1| Xenopus laevis orthodenticle homolog 5, mRNA (cDN... 40 7.6
29ref|XM_370515.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 7.6
30gb|BC077545.1| Xenopus laevis OTX5b protein, mRNA (cDNA clone MG... 40 7.6
31gb|BC058629.1| Mus musculus RIKEN cDNA 4121402D02 gene, mRNA (cD... 40 7.6
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.6
33gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
34ref|XM_994112.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.6
35ref|XM_994091.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.6
36ref|XM_994132.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 g... 40 7.6
37ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface prot... 40 7.6
38emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chro... 40 7.6
39emb|AL356423.15| Human DNA sequence from clone RP11-295B17 on ch... 40 7.6
40gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of... 40 7.6
41emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 7.6
42emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 7.6
43emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (... 40 7.6
44ref|NM_028722.1| Mus musculus RIKEN cDNA 4121402D02 gene (412140... 40 7.6
45gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, comple... 40 7.6
46dbj|AK053719.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 7.6
47dbj|AK014463.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.6
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
50dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
51dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
52gb|AY105501.1| Zea mays PCO142408 mRNA sequence 40 7.6
53emb|CR848167.2| Xenopus tropicalis finished cDNA, clone TGas127o03 40 7.6
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.6
55emb|AL590963.11| Mouse DNA sequence from clone RP23-395E10 on ch... 40 7.6
56dbj|AB034702.1| Xenopus laevis Xotx5 mRNA, complete cds 40 7.6 
>dbj|AK068580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157B08, full
           insert sequence
          Length = 873

 Score =  599 bits (302), Expect = e-168
 Identities = 407/442 (92%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
           ||||||||||||||||| ||||||| ||||| ||||||||| | |||||||| |||||| 
Sbjct: 160 tgaaggagacgacggggctcgtggggctggaggtggtgcccaacgcgcgggaggtgctcg 219

                                                                       
Query: 179 tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tcggcctctacacccgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 279

                                                                       
Query: 239 gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 280 gcaaggccgtcgagtccttcacccgccaccgcctccagatctgccaggaggaggacgact 339

                                                                       
Query: 299 ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
           |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 340 ggaagcgcatcgaggaccgcatcggctgcggccaggtcgaggagctcatcgaggaggccc 399

                                                                       
Query: 359 aggacgagctcaagctcatcggcaagatgatcgagtgggatccctggggtgttcctgatg 418
           ||||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||
Sbjct: 400 aggacgagctcaagctcatcgccaagatgatcgaatgggacccatggggtgttcctgatg 459

                                                                       
Query: 419 actacgaatgcgaggtgattgaagataacacacctattcccaagcatgttccgcagcacc 478
           |||| ||||||||||| ||||||||| |||||| ||| || || |||||||||||||| |
Sbjct: 460 actatgaatgcgaggttattgaagatgacacacttatcccgaaacatgttccgcagcatc 519

                                                                       
Query: 479 ggcccgttgcactacccgaggagttcttcaagacactagatgccatcaagtcagatccag 538
           |||| |||||||| || ||||||||||||||||||||||||||  |||| || ||||| |
Sbjct: 520 ggcctgttgcactccctgaggagttcttcaagacactagatgctgtcaaatctgatcctg 579

                                 
Query: 539 ctctgcagggtgactctcctcc 560
           ||||||||||||| ||||||||
Sbjct: 580 ctctgcagggtgagtctcctcc 601
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>gb|BT017270.1| Zea mays clone EL01N0312E10.c mRNA sequence
          Length = 800

 Score =  464 bits (234), Expect = e-127
 Identities = 372/418 (88%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
           |||||||||||||||||||||| || || || |||| |||| | |||||||| || ||||
Sbjct: 138 tgaaggagacgacggggatcgtcggccttgaggtggcgcccaacgcgcgggaggttctca 197

                                                                       
Query: 179 tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
           |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 198 tcgggctctacacgcgtacgctcaaggagatcgaggccgtccccaaagacgagggctacc 257

                                                                       
Query: 239 gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
           |||||||||| ||||||||||||   || |||||||||||||||||||||||||| ||||
Sbjct: 258 gcaaggccgttgagtccttcaccaatcaccgcctccagatctgccaggaggaggacgact 317

                                                                       
Query: 299 ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
           ||| | |||||||||||||  |||| ||||| || || || |||||||||||||||||| 
Sbjct: 318 ggatgtgcatcgaggaccgaatcggatgcgggcaagtcgaggagctcatcgaggaggccg 377

                                                                       
Query: 359 aggacgagctcaagctcatcggcaagatgatcgagtgggatccctggggtgttcctgatg 418
           ||||||||||||||||||||| ||| ||||| || |||||||| |||||||| |||||||
Sbjct: 378 aggacgagctcaagctcatcgccaaaatgattgaatgggatccgtggggtgtccctgatg 437

                                                                       
Query: 419 actacgaatgcgaggtgattgaagataacacacctattcccaagcatgttccgcagcacc 478
           |||||||||| ||||||||||||||  |||| || ||||| ||||||||||| |||||||
Sbjct: 438 actacgaatgtgaggtgattgaagacgacaccccaattcctaagcatgttcctcagcacc 497

                                                                     
Query: 479 ggcccgttgcactacccgaggagttcttcaagacactagatgccatcaagtcagatcc 536
           |||||||||| || || ||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 498 ggcccgttgctcttcctgaggagttcttcaagacactagatgccgtcaaatcagatcc 555
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  430 bits (217), Expect = e-117
 Identities = 259/273 (94%)
 Strand = Plus / Plus

                                                                            
Query: 119      tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
                ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| 
Sbjct: 11154308 tgaaggagacgacggggatcgtggggctggaggtggtgcccaacgcgcgggaggtgctcg 11154367

                                                                            
Query: 179      tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
                |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11154368 tcggcctctacacccgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 11154427

                                                                            
Query: 239      gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 11154428 gcaaggccgtcgagtccttcacccgccaccgcctccagatctgccaggaggaggacgact 11154487

                                                                            
Query: 299      ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
                |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 11154488 ggaagcgcatcgaggaccgcatcggctgcggccaggtcgaggagctcatcgaggaggccc 11154547

                                                 
Query: 359      aggacgagctcaagctcatcggcaagatgatcg 391
                ||||||||||||||||||||| |||||||||||
Sbjct: 11154548 aggacgagctcaagctcatcgccaagatgatcg 11154580



 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Plus

                                                                            
Query: 394      tgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacct 453
                ||||| || |||||||||||||||||||| ||||||||||| ||||||||| |||||| |
Sbjct: 11156614 tgggacccatggggtgttcctgatgactatgaatgcgaggttattgaagatgacacactt 11156673

                                                                            
Query: 454      attcccaagcatgttccgcagcaccggcccgttgcactacccgaggagttcttcaagaca 513
                || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 11156674 atcccgaaacatgttccgcagcatcggcctgttgcactccctgaggagttcttcaagaca 11156733

                                                               
Query: 514      ctagatgccatcaagtcagatccagctctgcagggtgactctcctcc 560
                ||||||||  |||| || ||||| |||||||||||||| ||||||||
Sbjct: 11156734 ctagatgctgtcaaatctgatcctgctctgcagggtgagtctcctcc 11156780
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>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score =  430 bits (217), Expect = e-117
 Identities = 259/273 (94%)
 Strand = Plus / Plus

                                                                         
Query: 119   tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
             ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| 
Sbjct: 67665 tgaaggagacgacggggatcgtggggctggaggtggtgcccaacgcgcgggaggtgctcg 67724

                                                                         
Query: 179   tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
             |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67725 tcggcctctacacccgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 67784

                                                                         
Query: 239   gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 67785 gcaaggccgtcgagtccttcacccgccaccgcctccagatctgccaggaggaggacgact 67844

                                                                         
Query: 299   ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
             |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 67845 ggaagcgcatcgaggaccgcatcggctgcggccaggtcgaggagctcatcgaggaggccc 67904

                                              
Query: 359   aggacgagctcaagctcatcggcaagatgatcg 391
             ||||||||||||||||||||| |||||||||||
Sbjct: 67905 aggacgagctcaagctcatcgccaagatgatcg 67937



 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Plus

                                                                         
Query: 394   tgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacct 453
             ||||| || |||||||||||||||||||| ||||||||||| ||||||||| |||||| |
Sbjct: 69971 tgggacccatggggtgttcctgatgactatgaatgcgaggttattgaagatgacacactt 70030

                                                                         
Query: 454   attcccaagcatgttccgcagcaccggcccgttgcactacccgaggagttcttcaagaca 513
             || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 70031 atcccgaaacatgttccgcagcatcggcctgttgcactccctgaggagttcttcaagaca 70090

                                                            
Query: 514   ctagatgccatcaagtcagatccagctctgcagggtgactctcctcc 560
             ||||||||  |||| || ||||| |||||||||||||| ||||||||
Sbjct: 70091 ctagatgctgtcaaatctgatcctgctctgcagggtgagtctcctcc 70137
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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score =  430 bits (217), Expect = e-117
 Identities = 259/273 (94%)
 Strand = Plus / Minus

                                                                          
Query: 119    tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
              ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| 
Sbjct: 126421 tgaaggagacgacggggatcgtggggctggaggtggtgcccaacgcgcgggaggtgctcg 126362

                                                                          
Query: 179    tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
              |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126361 tcggcctctacacccgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 126302

                                                                          
Query: 239    gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 126301 gcaaggccgtcgagtccttcacccgccaccgcctccagatctgccaggaggaggacgact 126242

                                                                          
Query: 299    ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
              |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 126241 ggaagcgcatcgaggaccgcatcggctgcggccaggtcgaggagctcatcgaggaggccc 126182

                                               
Query: 359    aggacgagctcaagctcatcggcaagatgatcg 391
              ||||||||||||||||||||| |||||||||||
Sbjct: 126181 aggacgagctcaagctcatcgccaagatgatcg 126149



 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Minus

                                                                          
Query: 394    tgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacct 453
              ||||| || |||||||||||||||||||| ||||||||||| ||||||||| |||||| |
Sbjct: 124115 tgggacccatggggtgttcctgatgactatgaatgcgaggttattgaagatgacacactt 124056

                                                                          
Query: 454    attcccaagcatgttccgcagcaccggcccgttgcactacccgaggagttcttcaagaca 513
              || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 124055 atcccgaaacatgttccgcagcatcggcctgttgcactccctgaggagttcttcaagaca 123996

                                                             
Query: 514    ctagatgccatcaagtcagatccagctctgcagggtgactctcctcc 560
              ||||||||  |||| || ||||| |||||||||||||| ||||||||
Sbjct: 123995 ctagatgctgtcaaatctgatcctgctctgcagggtgagtctcctcc 123949
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  430 bits (217), Expect = e-117
 Identities = 259/273 (94%)
 Strand = Plus / Plus

                                                                            
Query: 119      tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
                ||||||||||||||||||||||||| ||||| ||||||||| | |||||||| |||||| 
Sbjct: 11151071 tgaaggagacgacggggatcgtggggctggaggtggtgcccaacgcgcgggaggtgctcg 11151130

                                                                            
Query: 179      tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
                |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11151131 tcggcctctacacccgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 11151190

                                                                            
Query: 239      gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 11151191 gcaaggccgtcgagtccttcacccgccaccgcctccagatctgccaggaggaggacgact 11151250

                                                                            
Query: 299      ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
                |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct: 11151251 ggaagcgcatcgaggaccgcatcggctgcggccaggtcgaggagctcatcgaggaggccc 11151310

                                                 
Query: 359      aggacgagctcaagctcatcggcaagatgatcg 391
                ||||||||||||||||||||| |||||||||||
Sbjct: 11151311 aggacgagctcaagctcatcgccaagatgatcg 11151343



 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Plus

                                                                            
Query: 394      tgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacct 453
                ||||| || |||||||||||||||||||| ||||||||||| ||||||||| |||||| |
Sbjct: 11153377 tgggacccatggggtgttcctgatgactatgaatgcgaggttattgaagatgacacactt 11153436

                                                                            
Query: 454      attcccaagcatgttccgcagcaccggcccgttgcactacccgaggagttcttcaagaca 513
                || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||||
Sbjct: 11153437 atcccgaaacatgttccgcagcatcggcctgttgcactccctgaggagttcttcaagaca 11153496

                                                               
Query: 514      ctagatgccatcaagtcagatccagctctgcagggtgactctcctcc 560
                ||||||||  |||| || ||||| |||||||||||||| ||||||||
Sbjct: 11153497 ctagatgctgtcaaatctgatcctgctctgcagggtgagtctcctcc 11153543
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>gb|AY109412.1| Zea mays CL3751_1 mRNA sequence
          Length = 1279

 Score =  396 bits (200), Expect = e-107
 Identities = 368/424 (86%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgaaggagacgacggggatcgtgggtctggacgtggtgcccgaggcgcgggatgtgctca 178
           ||||||||||||||||||||||||| || || ||||||||  | ||||| || || ||  
Sbjct: 129 tgaaggagacgacggggatcgtgggccttgaggtggtgcctaacgcgcgagaggttctgg 188

                                                                       
Query: 179 tcgggctctacacgcgcaccctcaaggagatcgaggccgtccccaaggacgagggctacc 238
           | |||||||||  |||||| ||||| |||||| ||||||||||| | |||||||| ||||
Sbjct: 189 tagggctctacgagcgcacgctcaaagagatcaaggccgtccccgaagacgagggttacc 248

                                                                       
Query: 239 gcaaggccgtcgagtccttcacccgccatcgcctccagatctgccaggaggaggaggact 298
           |||||||||| || ||||||||| | || |||||||||||||||||||||||||||||||
Sbjct: 249 gcaaggccgttgaatccttcaccggtcaccgcctccagatctgccaggaggaggaggact 308

                                                                       
Query: 299 ggaagcgcatcgaggaccgcctcggctgcggccaggttgaagagctcatcgaggaggccc 358
           |||||||||||||||||||  |||| ||||| ||||| || |||||||||||||||||| 
Sbjct: 309 ggaagcgcatcgaggaccgaatcggatgcgggcaggtcgaggagctcatcgaggaggccg 368

                                                                       
Query: 359 aggacgagctcaagctcatcggcaagatgatcgagtgggatccctggggtgttcctgatg 418
           |||||||||||||||||||||  || ||||| || |||||||| ||||||||||| ||||
Sbjct: 369 aggacgagctcaagctcatcgctaaaatgattgaatgggatccatggggtgttcccgatg 428

                                                                       
Query: 419 actacgaatgcgaggtgattgaagataacacacctattcccaagcatgttccgcagcacc 478
           |||||||||| ||||||||||||||  |||| || ||||| ||||||||||| |||||||
Sbjct: 429 actacgaatgtgaggtgattgaagacgacaccccaattcctaagcatgttcctcagcacc 488

                                                                       
Query: 479 ggcccgttgcactacccgaggagttcttcaagacactagatgccatcaagtcagatccag 538
           |||| ||||| || || ||||||||||||||| ||||||||||  |||| || ||||| |
Sbjct: 489 ggcctgttgctcttcctgaggagttcttcaaggcactagatgctgtcaaatctgatcctg 548

               
Query: 539 ctct 542
           ||||
Sbjct: 549 ctct 552
to top
>gb|DQ226613.1| Boechera divaricarpa isolate SLW-3-G03 mRNA sequence
          Length = 535

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                       
Query: 385 atgatcgagtgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagat 444
           |||||||| |||||||| ||||||||||| ||||| ||||| ||||| || |||||  ||
Sbjct: 231 atgatcgaatgggatccttggggtgttccagatgattacgagtgcgaagtcattgagaat 172

                                              
Query: 445 aacacacctattcccaagcatgttccgcagcaccg 479
            |  |||| || ||||| |||||||||||||||||
Sbjct: 171 gatgcaccgatacccaaacatgttccgcagcaccg 137
to top
>ref|NM_124662.2| Arabidopsis thaliana oxidoreductase, acting on NADH or NADPH
           AT5G52840 mRNA, complete cds
          Length = 786

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 337 gaagagctcatcgaggaggcccaggacgagctcaagctcatcggcaagatgatcgagtgg 396
           |||||||| ||||| ||||| |  || |||||||  ||||| || || ||||| ||||||
Sbjct: 323 gaagagcttatcgaagaggctcgcgatgagctcacactcattgggaaaatgattgagtgg 382

                                                                       
Query: 397 gatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacctatt 456
           ||||| |||||||| || ||||| ||||| || || ||||||||  || |  | || |||
Sbjct: 383 gatccttggggtgtaccagatgattacgagtgtgaagtgattgagaatgatgcgccgatt 442

                                  
Query: 457 cccaagcatgttccgcagcaccg 479
           || ||||||||||| ||||||||
Sbjct: 443 ccaaagcatgttcctcagcaccg 465
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>gb|AY079117.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, complete cds
          Length = 510

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 337 gaagagctcatcgaggaggcccaggacgagctcaagctcatcggcaagatgatcgagtgg 396
           |||||||| ||||| ||||| |  || |||||||  ||||| || || ||||| ||||||
Sbjct: 259 gaagagcttatcgaagaggctcgcgatgagctcacactcattgggaaaatgattgagtgg 318

                                                                       
Query: 397 gatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacctatt 456
           ||||| |||||||| || ||||| ||||| || || ||||||||  || |  | || |||
Sbjct: 319 gatccttggggtgtaccagatgattacgagtgtgaagtgattgagaatgatgcgccgatt 378

                                  
Query: 457 cccaagcatgttccgcagcaccg 479
           || ||||||||||| ||||||||
Sbjct: 379 ccaaagcatgttcctcagcaccg 401
to top
>gb|AY054251.1| Arabidopsis thaliana AT5g52840/MXC20_6 mRNA, complete cds
          Length = 737

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 337 gaagagctcatcgaggaggcccaggacgagctcaagctcatcggcaagatgatcgagtgg 396
           |||||||| ||||| ||||| |  || |||||||  ||||| || || ||||| ||||||
Sbjct: 323 gaagagcttatcgaagaggctcgcgatgagctcacactcattgggaaaatgattgagtgg 382

                                                                       
Query: 397 gatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacctatt 456
           ||||| |||||||| || ||||| ||||| || || ||||||||  || |  | || |||
Sbjct: 383 gatccttggggtgtaccagatgattacgagtgtgaagtgattgagaatgatgcgccgatt 442

                                  
Query: 457 cccaagcatgttccgcagcaccg 479
           || ||||||||||| ||||||||
Sbjct: 443 ccaaagcatgttcctcagcaccg 465
to top
>emb|BX833220.1|CNS0A1UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL39ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 724

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 337 gaagagctcatcgaggaggcccaggacgagctcaagctcatcggcaagatgatcgagtgg 396
           |||||||| ||||| ||||| |  || |||||||  ||||| || || ||||| ||||||
Sbjct: 302 gaagagcttatcgaagaggctcgcgatgagctcacactcattgggaaaatgattgagtgg 361

                                                                       
Query: 397 gatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacacacctatt 456
           ||||| |||||||| || ||||| ||||| || || ||||||||  || |  | || |||
Sbjct: 362 gatccttggggtgtaccagatgattacgagtgtgaagtgattgagaatgatgcgccgatt 421

                                  
Query: 457 cccaagcatgttccgcagcaccg 479
           || ||||||||||| ||||||||
Sbjct: 422 ccaaagcatgttcctcagcaccg 444
to top
>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20
          Length = 81575

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                         
Query: 391   gagtgggatccctggggtgttcctgatgactacgaatgcgaggtgattgaagataacaca 450
             ||||||||||| |||||||| || ||||| ||||| || || ||||||||  || |  | 
Sbjct: 19653 gagtgggatccttggggtgtaccagatgattacgagtgtgaagtgattgagaatgatgcg 19712

                                          
Query: 451   cctattcccaagcatgttccgcagcaccg 479
             || ||||| ||||||||||| ||||||||
Sbjct: 19713 ccgattccaaagcatgttcctcagcaccg 19741
to top
>gb|AF439273.1|AF439273 Retama raetam NADH-ubiquinone oxidoreductase mRNA, partial cds
          Length = 622

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 133 gggatcgtgggtctggacgtggtgcc 158
           |||||||||||||| |||||||||||
Sbjct: 14  gggatcgtgggtctagacgtggtgcc 39
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>ref|XM_958190.1| Neurospora crassa OR74A hypothetical protein (NCU08411.1) partial
           mRNA
          Length = 1290

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 202 aaggagatcgaggccgtccccaaggacgagggc 234
           ||||||||||||||||||  ||||||| |||||
Sbjct: 676 aaggagatcgaggccgtcgtcaaggacaagggc 708
to top
>ref|XM_329456.1| Neurospora crassa OR74A hypothetical protein (NCU08411.1) partial
           mRNA
          Length = 1290

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 202 aaggagatcgaggccgtccccaaggacgagggc 234
           ||||||||||||||||||  ||||||| |||||
Sbjct: 676 aaggagatcgaggccgtcgtcaaggacaagggc 708
to top
>gb|AE009357.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 127 of
            187 of the complete sequence
          Length = 11647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 304  cgcatcgaggaccgcctcggc 324
            |||||||||||||||||||||
Sbjct: 5626 cgcatcgaggaccgcctcggc 5606
to top
>gb|AE008255.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 59 of 187
             of the complete sequence
          Length = 10966

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   cgcatcgaggaccgcctcggc 324
             |||||||||||||||||||||
Sbjct: 10013 cgcatcgaggaccgcctcggc 10033
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     gaccgcctcggctgcggccag 333
               |||||||||||||||||||||
Sbjct: 4796636 gaccgcctcggctgcggccag 4796656
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>gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase gene, complete cds
          Length = 3312

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   cagaagaagaagacggcggcg 52
            |||||||||||||||||||||
Sbjct: 2885 cagaagaagaagacggcggcg 2865
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>gb|AE005962.1| Caulobacter crescentus CB15 section 288 of 359 of the complete genome
          Length = 10708

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   cgagggctaccgcaaggccgt 248
             |||||||||||||||||||||
Sbjct: 10135 cgagggctaccgcaaggccgt 10115
to top
>gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA, complete cds
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   cagaagaagaagacggcggcg 52
            |||||||||||||||||||||
Sbjct: 1304 cagaagaagaagacggcggcg 1284
to top
>gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 of the complete
            genome
          Length = 10944

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 228  cgagggctaccgcaaggccgtcgag 252
            ||||||||||||| |||||||||||
Sbjct: 6064 cgagggctaccgccaggccgtcgag 6040
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 326     gcggccaggttgaagagctcatcgaggaggcccagga 362
               ||||| || ||||||||||||  ||||||||||||||
Sbjct: 1981952 gcggcgagcttgaagagctcaaagaggaggcccagga 1981916
to top
>ref|XM_464309.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 aggaggaggaggactggaag 303
           ||||||||||||||||||||
Sbjct: 153 aggaggaggaggactggaag 172
to top
>ref|NM_001016021.2| Xenopus tropicalis hypothetical protein LOC548775 (LOC548775), mRNA
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 527 tgccaggaggaggaggactg 508
to top
>gb|BC085002.1| Xenopus tropicalis cDNA clone IMAGE:7029264
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 638 tgccaggaggaggaggactg 619
to top
>gb|BC084194.1| Xenopus laevis orthodenticle homolog 5, mRNA (cDNA clone MGC:79897
           IMAGE:5156432), complete cds
          Length = 2510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 561 tgccaggaggaggaggactg 542
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>ref|XM_370515.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG07012.4) partial mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 agctcaagctcatcggcaag 384
           ||||||||||||||||||||
Sbjct: 608 agctcaagctcatcggcaag 627
to top
>gb|BC077545.1| Xenopus laevis OTX5b protein, mRNA (cDNA clone MGC:83443
           IMAGE:4740548), complete cds
          Length = 2323

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 627 tgccaggaggaggaggactg 608
to top
>gb|BC058629.1| Mus musculus RIKEN cDNA 4121402D02 gene, mRNA (cDNA clone MGC:64809
            IMAGE:6402215), complete cds
          Length = 2933

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2175 aggacgagctcaagctcatc 2156
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 146     tggacgtggtgcccgaggcg 165
               ||||||||||||||||||||
Sbjct: 2263309 tggacgtggtgcccgaggcg 2263290
to top
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088M05, complete sequence
          Length = 153368

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gaagaagaagacggcggcgg 53
             ||||||||||||||||||||
Sbjct: 77244 gaagaagaagacggcggcgg 77225
to top
>ref|XM_994112.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 5 (4121402D02Rik), mRNA
          Length = 3193

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 1024 aggacgagctcaagctcatc 1005
to top
>ref|XM_994091.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 2 (4121402D02Rik), mRNA
          Length = 4296

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2127 aggacgagctcaagctcatc 2108
to top
>ref|XM_994132.1| PREDICTED: Mus musculus RIKEN cDNA 4121402D02 gene, transcript
            variant 2 (4121402D02Rik), mRNA
          Length = 4344

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2175 aggacgagctcaagctcatc 2156
to top
>ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface protease GP63
            (Tc00.1047053507559.110) partial mRNA
          Length = 1968

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 273  ccagatctgccaggaggaggagga 296
            |||||||||||||||||| |||||
Sbjct: 991  ccagatctgccaggaggaagagga 1014
to top
>emb|AL445255.8| Human DNA sequence from clone RP11-89A14 on chromosome 13, complete
             sequence
          Length = 165011

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   tccctggggtgttcctgatgacta 422
             |||||||||||||||| |||||||
Sbjct: 44662 tccctggggtgttccttatgacta 44639
to top
>emb|AL356423.15| Human DNA sequence from clone RP11-295B17 on chromosome 13 Contains the
              5' end of the STK24 gene for serine/threonine kinase 24, a
              novel gene, a novel pseudogene, a cytochrome c pseudogene,
              a calmodulin 2 (CALM2) pseudogene and a CpG island,
              complete sequence
          Length = 174041

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    caggaggaggaggactggaa 302
              ||||||||||||||||||||
Sbjct: 133740 caggaggaggaggactggaa 133721
to top
>gb|AE008902.1| Salmonella typhimurium LT2, section 206 of 220 of the complete genome
          Length = 21440

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 321  cggctgcggccaggttgaagagct 344
            |||| |||||||||||||||||||
Sbjct: 8840 cggcggcggccaggttgaagagct 8863
to top
>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              2/8
          Length = 341553

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    gccgtcgagtccttcacccg 263
              ||||||||||||||||||||
Sbjct: 299580 gccgtcgagtccttcacccg 299561
to top
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   gcccaggacgagctcaagct 374
             ||||||||||||||||||||
Sbjct: 61176 gcccaggacgagctcaagct 61195
to top
>emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (otx5b gene)
          Length = 1575

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 696 tgccaggaggaggaggactg 677
to top
>ref|NM_028722.1| Mus musculus RIKEN cDNA 4121402D02 gene (4121402D02Rik), mRNA
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2428 aggacgagctcaagctcatc 2409
to top
>gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, complete sequence
          Length = 177300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   tgggatccctggggtgttcc 413
             ||||||||||||||||||||
Sbjct: 97196 tgggatccctggggtgttcc 97215
to top
>dbj|AK053719.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130302B09 product:hypothetical protein,
            full insert sequence
          Length = 2839

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2098 aggacgagctcaagctcatc 2079
to top
>dbj|AK014463.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4121402D02 product:hypothetical
            Proline-rich region containing protein, full insert
            sequence
          Length = 3161

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  aggacgagctcaagctcatc 378
            ||||||||||||||||||||
Sbjct: 2428 aggacgagctcaagctcatc 2409
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       gaagaagaagacggcggcgg 53
                ||||||||||||||||||||
Sbjct: 18284032 gaagaagaagacggcggcgg 18284013
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     aggaggaggaggactggaag 303
               ||||||||||||||||||||
Sbjct: 4024839 aggaggaggaggactggaag 4024858
to top
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A21
          Length = 170051

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aggaggaggaggactggaag 303
             ||||||||||||||||||||
Sbjct: 71505 aggaggaggaggactggaag 71524
to top
>dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M07, full
           insert sequence
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 aggaggaggaggactggaag 303
           ||||||||||||||||||||
Sbjct: 153 aggaggaggaggactggaag 172
to top
>gb|AY105501.1| Zea mays PCO142408 mRNA sequence
          Length = 1374

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 aggaggaggaggactggaag 303
           ||||||||||||||||||||
Sbjct: 134 aggaggaggaggactggaag 153
to top
>emb|CR848167.2| Xenopus tropicalis finished cDNA, clone TGas127o03
          Length = 2162

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 527 tgccaggaggaggaggactg 508
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 317     gcctcggctgcggccaggttgaag 340
               ||||||||| ||||||||||||||
Sbjct: 3290488 gcctcggcttcggccaggttgaag 3290465
to top
>emb|AL590963.11| Mouse DNA sequence from clone RP23-395E10 on chromosome 11, complete
             sequence
          Length = 196724

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   aggacgagctcaagctcatc 378
             ||||||||||||||||||||
Sbjct: 52883 aggacgagctcaagctcatc 52902
to top
>dbj|AB034702.1| Xenopus laevis Xotx5 mRNA, complete cds
          Length = 1310

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgccaggaggaggaggactg 299
           ||||||||||||||||||||
Sbjct: 572 tgccaggaggaggaggactg 553


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,807,185
Number of Sequences: 3902068
Number of extensions: 4807185
Number of successful extensions: 94305
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93805
Number of HSP's gapped (non-prelim): 493
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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