ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags21a24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 613 bits (309), Expect = e-172 Identities = 495/557 (88%) Strand = Plus / Plus Query: 15 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 74 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 265 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 324 Query: 75 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 134 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 325 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 384 Query: 135 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 194 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 385 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 444 Query: 195 cttagctcttacgatcacgcatcaatccgccgtggacatcaagtttaccagcaagtgtgt 254 ||||||||||| || || ||||| || || ||||||||||||||||| ||||||||| Sbjct: 445 cttagctcttatgaccatgcatctattcggcgtggacatcaagtttatacacaagtgtgt 504 Query: 255 gcatcttgtcactccatgtcattgatttcataccgtgatttggttggggtggcctatact 314 || ||||| || ||||||||||| ||||| ||||| ||||||||||| |||||||| ||| Sbjct: 505 gcctcttgccattccatgtcattaatttcgtaccgagatttggttggtgtggcctacact 564 Query: 315 gaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgag 374 ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 565 gaagaagaaacaaaggctatggctgctgagattgaggtggttgatggtcctaatgatgag 624 Query: 375 ggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagccttatccaaat 434 |||||||||||||| |||||||| ||| | ||||| || ||||| || || ||||||||| Sbjct: 625 ggtgaaatgttcacacgtcctggtaagttaagtgaccggttcccacaaccatatccaaat 684 Query: 435 gagcaagcagcccgatttgcaaatggtggggcatatcccccagatctcagccttatcacg 494 |||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 685 gagcaagcagcccgttttgcaaatggtggggcatacccaccagatctcagtcttatcacg 744 Query: 495 aaggcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgaccca 554 |||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 745 aaggcaaggcacaatggccagaactatgtgtttgctcttcttactggttaccgtgatcca 804 Query: 555 cctgctggtgttcagat 571 ||||| ||||||||||| Sbjct: 805 cctgccggtgttcagat 821
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 593 bits (299), Expect = e-166 Identities = 479/539 (88%) Strand = Plus / Plus Query: 33 tcatttcggggaaagcatgaagagtcctctgctggactgagagcattggctcttctcgga 92 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 200 tcatttcggggaaagcatgaagaatcctctgctggactgagagcattggctcttcttgga 259 Query: 93 gttggtgcttctggtcttttatgttttggtacgatagcatctgcagatgaagccgagcat 152 |||||||| ||||||||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 260 gttggtgcctctggtcttttgagtttttctacaatagcatctgctgatgaagctgagcat 319 Query: 153 ggtttggcagctgcagagtacccctggccgcatgctggcatccttagctcttacgatcac 212 || |||||||| |||| || |||||||| |||||||||||| | ||||| || |||||| Sbjct: 320 ggcttggcagccccagattatccctggccacatgctggcatcatgagctcgtatgatcac 379 Query: 213 gcatcaatccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatg 272 |||||||| || ||||| |||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 380 gcatcaattcggcgtgggcatcaagtttacacgcaagtttgtgcctcttgtcactccatg 439 Query: 273 tcattgatttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggca 332 || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 440 tccttgatttcataccgtgatttggttggcgtggcctatactgaagaggaaacaaaggca 499 Query: 333 atggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgt 392 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || Sbjct: 500 atggctgctgagattgaggtagttgatggtcctaatgatgagggtgaaatgttcacccgc 559 Query: 393 cctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagcccgattt 452 ||||| || ||||| ||||||||||| ||||||||| |||| |||||||||||||| ||| Sbjct: 560 cctggtaaactgagcgatcgcttcccacagccttatgcaaacgagcaagcagcccggttt 619 Query: 453 gcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggcacgatggc 512 || |||||||| ||||| || || || || || || ||||| |||||||||||| |||| Sbjct: 620 gctaatggtggtgcataccctccggaccttagtctcatcacaaaggcaaggcacaatggt 679 Query: 513 cagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgttcagat 571 |||||||| || || |||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 680 cagaactatgttttcgctcttcttactggatatcatgatccacctgctggtgttcagat 738
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 587 bits (296), Expect = e-164 Identities = 485/548 (88%) Strand = Plus / Plus Query: 24 ctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgagagcattggct 83 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 235 ctgctttcttcatttcggggaaatcatgaagagtcctctgctggattgagagcattggcg 294 Query: 84 cttctcggagttggtgcttctggtcttttatgttttggtacgatagcatctgcagatgaa 143 ||||| ||||||||||| || |||||||| |||||| ||| ||||||||||| |||||| Sbjct: 295 cttcttggagttggtgcctccggtcttttgagttttgctacaatagcatctgctgatgaa 354 Query: 144 gccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatccttagctct 203 || ||||||||||||||||| |||| || || ||||| |||||||||||| | |||||| Sbjct: 355 gctgagcatggtttggcagccccagattatccgtggccacatgctggcatcatgagctct 414 Query: 204 tacgatcacgcatcaatccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgt 263 || ||||| |||||||| ||||| || |||||||||||| ||||| ||||| |||||| Sbjct: 415 tatgatcatgcatcaattcgccgagggcatcaagtttacacacaagtttgtgcttcttgt 474 Query: 264 cactccatgtcattgatttcataccgtgatttggttggggtggcctatactgaagaggaa 323 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 475 cactccatgtccttgatttcataccgtgatttggttggggtggcctatactgaggaggaa 534 Query: 324 actaaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatg 383 || ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 535 acaaaggcaatggctgctgagattgaggtcgttgatggtcctaatgatgagggtgaaatg 594 Query: 384 ttcacgcgtcctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagca 443 ||||| || ||||| || || || |||||||| || ||||||||| |||||||||||||| Sbjct: 595 ttcacccgccctggtaaactcagcgatcgctttccacagccttatgcaaatgagcaagca 654 Query: 444 gcccgatttgcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaagg 503 ||||||||||| |||||||| || || || || || || || |||||||| ||||||||| Sbjct: 655 gcccgatttgctaatggtggcgcctacccgccggaccttagtcttatcacaaaggcaagg 714 Query: 504 cacgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggt 563 ||| |||| |||||||| || || |||||||||||||| |||| ||| |||||||||||| Sbjct: 715 cacaatggtcagaactatgttttcgctcttcttactggataccgtgatccacctgctggt 774 Query: 564 gttcagat 571 |||||||| Sbjct: 775 gttcagat 782
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 466 bits (235), Expect = e-128 Identities = 436/503 (86%) Strand = Plus / Plus Query: 64 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 123 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 110 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 169 Query: 124 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 183 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 170 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 229 Query: 184 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 243 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 230 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 289 Query: 244 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 303 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 290 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 349 Query: 304 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 363 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 350 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 409 Query: 364 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 423 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 410 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 469 Query: 424 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 483 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 470 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 529 Query: 484 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttcttactggtt 543 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| ||||||| Sbjct: 530 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttctcactggtt 589 Query: 544 accatgacccacctgctggtgtt 566 | | ||| ||||||||||||||| Sbjct: 590 atcgtgatccacctgctggtgtt 612
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 466 bits (235), Expect = e-128 Identities = 436/503 (86%) Strand = Plus / Plus Query: 64 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 123 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 334 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 393 Query: 124 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 183 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 394 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 453 Query: 184 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 243 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 454 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 513 Query: 244 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 303 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 514 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 573 Query: 304 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 363 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 574 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 633 Query: 364 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 423 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 634 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 693 Query: 424 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 483 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 694 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 753 Query: 484 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttcttactggtt 543 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| ||||||| Sbjct: 754 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttctcactggtt 813 Query: 544 accatgacccacctgctggtgtt 566 | | ||| ||||||||||||||| Sbjct: 814 atcgtgatccacctgctggtgtt 836
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 466 bits (235), Expect = e-128 Identities = 436/503 (86%) Strand = Plus / Plus Query: 64 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 123 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 258 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 317 Query: 124 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 183 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 318 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 377 Query: 184 atgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaagtttacc 243 ||||||||||||||||||| || ||||| |||||||| | ||||| ||||||||||| Sbjct: 378 atgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttata 437 Query: 244 agcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttggttgggg 303 ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 438 cacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtg 497 Query: 304 tggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggttgatggtc 363 |||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||| Sbjct: 498 tggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtc 557 Query: 364 ctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttcccgcagc 423 |||||||||| |||||||||||||| ||||| || |||||||| || || ||||| || | Sbjct: 558 ctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaac 617 Query: 424 cttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatcccccagatctca 483 | || |||||||||||||||| |||||| ||||||| |||||||| ||||| ||||||| Sbjct: 618 cctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctca 677 Query: 484 gccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttcttactggtt 543 | || ||||| ||||| |||||| ||||||||||||| || ||||||||||| ||||||| Sbjct: 678 gtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttctcactggtt 737 Query: 544 accatgacccacctgctggtgtt 566 | | ||| ||||||||||||||| Sbjct: 738 atcgtgatccacctgctggtgtt 760
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 305 bits (154), Expect = 8e-80 Identities = 244/274 (89%) Strand = Plus / Minus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 94714 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 94655 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 94654 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 94595 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 94594 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 94535 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 ||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 94534 agtgaccggttcccacaaccatatccaaatgagcaagcagcccgttttgcaaatggtggg 94475 Query: 465 gcatatcccccagatctcagccttatcacgaagg 498 ||||| || ||||||||||| ||||||||||||| Sbjct: 94474 gcatacccaccagatctcagtcttatcacgaagg 94441 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 15 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 74 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 95193 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 95134 Query: 75 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 134 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 95133 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 95074 Query: 135 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 194 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 95073 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 95014 Query: 195 cttagctctta 205 ||||||||||| Sbjct: 95013 cttagctctta 95003 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 496 aggcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccac 555 ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 94358 aggcaaggcacaatggccagaactatgtgtttgctcttcttactggttaccgtgatccac 94299 Query: 556 ctgctggtgttcag 569 |||| ||||||||| Sbjct: 94298 ctgccggtgttcag 94285
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 305 bits (154), Expect = 8e-80 Identities = 244/274 (89%) Strand = Plus / Minus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 13411251 cgtggacatcaagtttatacacaagtgtgtgcctcttgccattccatgtcattaatttcg 13411192 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 13411191 taccgagatttggttggtgtggcctacactgaagaagaaacaaaggctatggctgctgag 13411132 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct: 13411131 attgaggtggttgatggtcctaatgatgagggtgaaatgttcacacgtcctggtaagtta 13411072 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 ||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13411071 agtgaccggttcccacaaccatatccaaatgagcaagcagcccgttttgcaaatggtggg 13411012 Query: 465 gcatatcccccagatctcagccttatcacgaagg 498 ||||| || ||||||||||| ||||||||||||| Sbjct: 13411011 gcatacccaccagatctcagtcttatcacgaagg 13410978 Score = 212 bits (107), Expect = 9e-52 Identities = 170/191 (89%) Strand = Plus / Minus Query: 15 ggctcatctctgctttcttcatttcggggaaagcatgaagagtcctctgctggactgaga 74 |||||||||||||| || || || ||| |||||||||||| ||||| |||||||||||| Sbjct: 13411730 ggctcatctctgctatcctcgttccggataaagcatgaagaatcctccgctggactgaga 13411671 Query: 75 gcattggctcttctcggagttggtgcttctggtcttttatgttttggtacgatagcatct 134 |||||||||||||| |||||||||||||||||||||||| | |||| ||| ||||| ||| Sbjct: 13411670 gcattggctcttcttggagttggtgcttctggtcttttaagctttgctacaatagcttct 13411611 Query: 135 gcagatgaagccgagcatggtttggcagctgcagagtacccctggccgcatgctggcatc 194 ||||||||||| ||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 13411610 gcagatgaagctgagcatggtttggcagcagctgaatatccctggccacatgctggcatt 13411551 Query: 195 cttagctctta 205 ||||||||||| Sbjct: 13411550 cttagctctta 13411540 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 496 aggcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccac 555 ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 13410895 aggcaaggcacaatggccagaactatgtgtttgctcttcttactggttaccgtgatccac 13410836 Query: 556 ctgctggtgttcag 569 |||| ||||||||| Sbjct: 13410835 ctgccggtgttcag 13410822
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 266 bits (134), Expect = 7e-68 Identities = 239/274 (87%) Strand = Plus / Plus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 41069204 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 41069263 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 41069264 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 41069323 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 41069324 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 41069383 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 || || || ||||| || || || |||||||||||||||| |||||| ||||||| ||| Sbjct: 41069384 agcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggg 41069443 Query: 465 gcatatcccccagatctcagccttatcacgaagg 498 ||||| ||||| |||||||| || ||||| |||| Sbjct: 41069444 gcataccccccggatctcagtctaatcacaaagg 41069477 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 64 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 123 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 41068724 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 41068783 Query: 124 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 183 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 41068784 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 41068843 Query: 184 atgctggcatccttagctcttacgatcacgcatc 217 ||||||||||||||||||| || ||||| ||||| Sbjct: 41068844 atgctggcatccttagctcatatgatcatgcatc 41068877 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 496 aggcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccac 555 |||| |||||| ||||||||||||| || ||||||||||| |||||||| | ||| |||| Sbjct: 41069564 aggccaggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccac 41069623 Query: 556 ctgctggtgtt 566 ||||||||||| Sbjct: 41069624 ctgctggtgtt 41069634
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 266 bits (134), Expect = 7e-68 Identities = 239/274 (87%) Strand = Plus / Plus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 106134 cgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttca 106193 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 106194 taccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgag 106253 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 106254 attgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctg 106313 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 || || || ||||| || || || |||||||||||||||| |||||| ||||||| ||| Sbjct: 106314 agcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggg 106373 Query: 465 gcatatcccccagatctcagccttatcacgaagg 498 ||||| ||||| |||||||| || ||||| |||| Sbjct: 106374 gcataccccccggatctcagtctaatcacaaagg 106407 Score = 139 bits (70), Expect = 1e-29 Identities = 133/154 (86%) Strand = Plus / Plus Query: 64 ctggactgagagcattggctcttctcggagttggtgcttctggtcttttatgttttggta 123 ||||| |||||||||||||| |||| ||||||||||||||||| |||||| |||||| || Sbjct: 105654 ctggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgcta 105713 Query: 124 cgatagcatctgcagatgaagccgagcatggtttggcagctgcagagtacccctggccgc 183 | || |||||||| |||||||| |||||||| |||| ||| || | || |||||||| | Sbjct: 105714 caattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccac 105773 Query: 184 atgctggcatccttagctcttacgatcacgcatc 217 ||||||||||||||||||| || ||||| ||||| Sbjct: 105774 atgctggcatccttagctcatatgatcatgcatc 105807 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 496 aggcaaggcacgatggccagaactacgtgtttgctcttcttactggttaccatgacccac 555 |||| |||||| ||||||||||||| || ||||||||||| |||||||| | ||| |||| Sbjct: 106494 aggccaggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccac 106553 Query: 556 ctgctggtgtt 566 ||||||||||| Sbjct: 106554 ctgctggtgtt 106564
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 204 bits (103), Expect = 2e-49 Identities = 277/335 (82%) Strand = Plus / Plus Query: 231 catcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgt 290 ||||| |||||||||||||||||||| || || ||||| ||||| | ||||| |||||| Sbjct: 494 catcaggtttaccagcaagtgtgtgcgtcctgccactcaatgtcgctaatttcctaccgt 553 Query: 291 gatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaa 350 ||| | ||||| || || || |||||||| ||||||||||| ||||| || |||||||| Sbjct: 554 gatcttgttggtgttgcatacactgaagaagaaactaaggccatggcagcagaaattgag 613 Query: 351 gtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgat 410 ||||||||||| ||||||||||||||||| |||||||| || ||||| ||| |||||||| Sbjct: 614 gtggttgatggccctaatgatgagggtgagatgttcacccgccctgggaagttgagtgat 673 Query: 411 cgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggggcatat 470 || || || |||||||| |||||||| ||| || | ||||||||||||||||| ||| Sbjct: 674 cgttttccacagccttacccaaatgaagcagctgcaaggtttgcaaatggtggggcttat 733 Query: 471 cccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgtttgct 530 || || ||||| || |||||||| ||||| |||| | || || ||||| || |||||| Sbjct: 734 cctcctgatctaagtcttatcactaaggcccggcataacggtcaaaactatgtttttgct 793 Query: 531 cttcttactggttaccatgacccacctgctggtgt 565 ||||| ||||| |||| ||||| |||||| |||| Sbjct: 794 cttctaactggctaccgggaccctcctgcttgtgt 828
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 178 bits (90), Expect = 1e-41 Identities = 315/390 (80%) Strand = Plus / Plus Query: 177 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 236 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 93 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 152 Query: 237 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 296 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 153 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 212 Query: 297 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 356 || |||||||| ||||| || |||||| ||||| ||||| ||||| ||||| |||| Sbjct: 213 gtcggggtggcatatacagaggaggaagtaaaggctatggcagctgagattgaggtggag 272 Query: 357 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 416 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 273 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 332 Query: 417 ccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatccccca 476 || ||||| ||||||||||| || || ||||||| ||||| ||||| || || ||| Sbjct: 333 cctcagccatatccaaatgaagctgctgctagatttgctaatgggggggcctaccctcca 392 Query: 477 gatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttctt 536 ||| | || ||||| || || ||| | || |||| || ||||| ||||||||||||||| Sbjct: 393 gatttaagtcttattacaaaagcacgccataatggtcaaaactatgtgtttgctcttctt 452 Query: 537 actggttaccatgacccacctgctggtgtt 566 ||||| || | ||| || |||||||||||| Sbjct: 453 actggctatcgtgatcctcctgctggtgtt 482
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 170 bits (86), Expect = 3e-39 Identities = 314/390 (80%) Strand = Plus / Plus Query: 177 tggccgcatgctggcatccttagctcttacgatcacgcatcaatccgccgtggacatcaa 236 ||||| ||||| ||||| ||||| || |||||||| || || || || ||||| || || Sbjct: 390 tggcctcatgcaggcattcttagttcatacgatcatgcttcgattcgtcgtggtcaccag 449 Query: 237 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 296 ||||| || ||||| |||||||||||||| || |||||| | ||||||| ||||| ||| Sbjct: 450 gtttatcaacaagtatgtgcatcttgtcattcaatgtcacttgtttcatatcgtgacttg 509 Query: 297 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 356 || |||||||| ||||| || || ||| ||||| ||||| ||||| ||||| |||| Sbjct: 510 gtcggggtggcatatacagaggaagaagtaaaggctatggcagctgagattgaggtggcg 569 Query: 357 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 416 ||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| || Sbjct: 570 gatgggcctaatgatgagggtgaaatgtttacccgtcctggtaaactgagtgatcgtttt 629 Query: 417 ccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggggcatatccccca 476 || ||||| ||||||||||| ||| || ||||||| ||||| || || || || ||| Sbjct: 630 cctcagccatatccaaatgaagcagctgctagatttgctaatgggggagcctaccctcca 689 Query: 477 gatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgtttgctcttctt 536 ||| | || ||||| || || ||| | || |||| || ||||| ||||||||||||||| Sbjct: 690 gatttaagtcttattacaaaagcacgccataatggtcaaaactatgtgtttgctcttctt 749 Query: 537 actggttaccatgacccacctgctggtgtt 566 ||||| || | ||| || |||||||||||| Sbjct: 750 actggctatcgtgatcctcctgctggtgtt 779
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 161 bits (81), Expect = 3e-36 Identities = 318/397 (80%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 334 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 393 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 394 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 453 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 454 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 513 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 514 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 573 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 574 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 633 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || |||||||| |||||| | ||| |||| | ||||| || | Sbjct: 634 cgtatcctcctgatctaagtcttatcactaaggcacgtcacaatggtccaaactatgtct 693 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 694 ttgcgcttctgactggttaccgtgatccccctgctgg 730
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 153 bits (77), Expect = 7e-34 Identities = 317/397 (79%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 596 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 655 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || | Sbjct: 656 cgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtct 715 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 716 ttgcgcttctgactggttaccgtgatccccctgctgg 752
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 153 bits (77), Expect = 7e-34 Identities = 317/397 (79%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 322 cagagtacccgtggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 381 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 382 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 441 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 442 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 501 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 502 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 561 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 562 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 621 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || | Sbjct: 622 cgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtct 681 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 682 ttgcgcttctgactggttaccgtgatccccctgctgg 718
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 153 bits (77), Expect = 7e-34 Identities = 317/397 (79%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 423 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 543 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 544 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 603 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || | Sbjct: 604 cgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtct 663 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 664 ttgcgcttctgactggttaccgtgatccccctgctgg 700
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 145 bits (73), Expect = 2e-31 Identities = 316/397 (79%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 221 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 280 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 281 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 340 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 341 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 400 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 401 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 460 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 461 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 520 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || | Sbjct: 521 cgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtct 580 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 581 ttgcgcttctgactggttaccgtgatccccctgctgg 617
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 145 bits (73), Expect = 2e-31 Identities = 316/397 (79%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 356 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 415 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 416 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 475 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| | || || || | ||||||||||| ||||||| Sbjct: 476 accgagacttggtgggtgtcgcctacgcagaggaagaggcaaaggcaatggcagctgaaa 535 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctga 405 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || | Sbjct: 536 tcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactca 595 Query: 406 gtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtgggg 465 |||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| | Sbjct: 596 gtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtggag 655 Query: 466 catatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtgt 525 | ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || | Sbjct: 656 cgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtct 715 Query: 526 ttgctcttcttactggttaccatgacccacctgctgg 562 |||| ||||| |||||||||| ||| || |||||||| Sbjct: 716 ttgcgcttctgactggttaccgtgatccccctgctgg 752
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 145 bits (73), Expect = 2e-31 Identities = 201/241 (83%), Gaps = 2/241 (0%) Strand = Plus / Plus Query: 327 aaggcaatggctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttc 386 ||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 16 aaggccatggctgctgaaattgaggtggt-gatggtcctaatgatgaaggtgagatgttc 74 Query: 387 acg-cgtcctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagc 445 || |||||||| || | || ||||| ||||| ||||| ||| |||| || ||||| || Sbjct: 75 actacgtcctggtaaattaagcgatcgtttccctcagccatatgcaaacgaacaagctgc 134 Query: 446 ccgatttgcaaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggca 505 | |||||||||||||| |||||||| ||||| || ||||| || || ||||| | || Sbjct: 135 aaggtttgcaaatggtggagcatatcctccagacctaagcctaataactaaggctcgaca 194 Query: 506 cgatggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgt 565 | |||| |||||||| || ||||||||||||||||| |||| ||| || ||||||||||| Sbjct: 195 caatggacagaactatgtatttgctcttcttactggctaccgtgatcctcctgctggtgt 254 Query: 566 t 566 | Sbjct: 255 t 255
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 137 bits (69), Expect = 4e-29 Identities = 210/257 (81%) Strand = Plus / Plus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||| ||||||||||| |||||| ||||| || || || |||||||| ||||| ||| Sbjct: 77041 cgtggtcatcaagtttatacgcaagtctgtgcttcctgccattccatgtctttgatatca 77100 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||||||||||||||| || || || || |||| ||| |||||||||||| |||| Sbjct: 77101 taccgtgatttggttggtgttgcttacacagaagcggaggtaaaggcaatggctactgag 77160 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 ||||| ||||||||||| ||||||||||||||||| ||||| || || || ||||| || Sbjct: 77161 attgaggtggttgatggccctaatgatgagggtgagatgtttacacgacccggcaaactc 77220 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 ||||||||||| || ||||| ||| ||||||| ||| || ||||||| ||||| || Sbjct: 77221 agtgatcgctttcctcagccatattcaaatgaatcagctgctagatttgctaatggagga 77280 Query: 465 gcatatcccccagatct 481 || ||||| |||||||| Sbjct: 77281 gcctatcctccagatct 77297 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 105587 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 105646 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 105647 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 105706 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 105707 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 105766 Query: 405 agtgatcgcttcccgcagccttatccaaatga 436 ||||||||||| || ||||| ||| ||||||| Sbjct: 105767 agtgatcgctttcctcagccatatgcaaatga 105798 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 508 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 566 |||| |||||||||||||||||||||||||| ||||| | |||||| |||||||||||| Sbjct: 77401 atggtcagaactacgtgtttgctcttcttaccggttatcgtgacccccctgctggtgtt 77459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 508 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 566 |||| |||||||| ||||||||||| || || ||||| | |||||| |||||||||||| Sbjct: 105953 atggtcagaactatgtgtttgctctcctaaccggttatcgtgacccccctgctggtgtt 106011
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 237 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 296 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 4150 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 4209 Query: 297 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 356 |||||||| || ||||| || || || || ||||| ||||| || |||||||| |||||| Sbjct: 4210 gttggggttgcgtataccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 4269 Query: 357 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 416 ||||| ||||||||||| ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 4270 gatgggcctaatgatgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 4329 Query: 417 ccgcagccttatccaaatga 436 || ||||||||| ||||||| Sbjct: 4330 cctcagccttatgcaaatga 4349 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 516 aactacgtgtttgctcttcttactggttaccatgacccacctgctggtgt 565 ||||| || ||||||||||| ||||| |||| ||||| ||||||||||| Sbjct: 4496 aactatgtttttgctcttctaactggctaccgcgaccctcctgctggtgt 4545
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 131 bits (66), Expect = 3e-27 Identities = 316/398 (79%), Gaps = 1/398 (0%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 304 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 363 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| ||| |||| || || || ||||| |||| |||| Sbjct: 364 gtgggcatcaagtttatcagcaagtctgttcatcatgccattcaatgtctctgatctcat 423 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 424 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 483 Query: 346 ttgaagtggttgatggtcctaatgatgagggtgaaatgttca-cgcgtcctggcaagctg 404 | || || || ||||| ||||||||||||||||| ||||||| | || ||||| || || Sbjct: 484 tcgaggtagtagatggacctaatgatgagggtgagatgttcaccccgccctggtaaactc 543 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 ||||| || || || ||||| ||| ||||||| ||| || | ||||| |||||||| Sbjct: 544 agtgaccggtttcctcagccatatgcaaatgaatcagctgcaaggtttgctaatggtgga 603 Query: 465 gcatatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtg 524 || ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || Sbjct: 604 gcgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtc 663 Query: 525 tttgctcttcttactggttaccatgacccacctgctgg 562 ||||| ||||| |||||||||| ||| || |||||||| Sbjct: 664 tttgcgcttctgactggttaccgtgatccccctgctgg 701
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 129 bits (65), Expect = 1e-26 Identities = 238/293 (81%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 276 ttgatttcataccgtgatttggttggg-gtggcctatactgaagaggaaactaaggcaat 334 ||||| |||||||||||||||||||| || || ||||| ||||| ||| ||||| || Sbjct: 23 ttgatatcataccgtgatttggttggctgttgcttatacagaagatgaagtaaaggccat 82 Query: 335 gg-ctgctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtc 393 || | ||||| ||||| |||||||| ||||||||||||||||||||||||||||| || | Sbjct: 83 ggacagctgagattgaggtggttgacggtcctaatgatgagggtgaaatgttcactcgcc 142 Query: 394 ctggcaagctgagtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttg 453 | || || || ||||||||||| || ||||| ||| ||||||| ||| || | |||| Sbjct: 143 ccggtaaactcagtgatcgctttcctcagccatatgcaaatgaagcagctgctaggtttg 202 Query: 454 caaatggtggggcatatcccccagatctcagccttatcacgaaggcaaggcacgatggcc 513 | ||||| || || ||||| |||||||| || ||||| || ||||| | ||| |||| | Sbjct: 203 ctaatggaggagcctatcctccagatctaagtcttattaccaaggcccgtcacaatggtc 262 Query: 514 agaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 566 |||| || |||||||| ||||| |||||||| | ||| || |||||||||||| Sbjct: 263 agaattatgtgtttgcccttctaactggttatcgtgatccccctgctggtgtt 315
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 127 bits (64), Expect = 4e-26 Identities = 166/200 (83%) Strand = Plus / Plus Query: 237 gtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcataccgtgatttg 296 |||||||| ||||| || || || || ||||| ||||| | |||||||| |||||| | Sbjct: 443 gtttaccaacaagtttgcgcgtcatgccactcaatgtctctaatttcatatcgtgatctt 502 Query: 297 gttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaattgaagtggtt 356 |||||||| ||||| || || || || || ||||| ||||| || |||||||| |||||| Sbjct: 503 gttggggttgcctacaccgaggaagagaccaaggccatggcagcagaaattgaggtggtt 562 Query: 357 gatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctgagtgatcgcttc 416 ||||| |||||||| || ||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 563 gatgggcctaatgacgaaggtgagatgtttacccgtcctgggaagctgagtgatcgtttc 622 Query: 417 ccgcagccttatccaaatga 436 || ||||||||| ||||||| Sbjct: 623 cctcagccttatgcaaatga 642
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 123 bits (62), Expect = 7e-25 Identities = 316/398 (79%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 166 cagagtacccctggccgcatgctggcatccttagctcttacgatcacgcatcaatccgcc 225 |||||||||| ||||| |||| |||||| |||||||| || || || || || ||||| | Sbjct: 279 cagagtacccttggcctcatgatggcattcttagctcatatgaccatgcttcgatccgtc 338 Query: 226 gtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttcat 285 |||| ||||||||||| |||||||| |||||||| || || || ||||| |||| |||| Sbjct: 339 gtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctgatctcat 398 Query: 286 accgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaaa 345 |||| || ||||| || || ||||| || || || || | ||||||||||| ||||||| Sbjct: 399 accgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggcagctgaaa 458 Query: 346 ttgaagt-ggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 | || || || ||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 459 tcgaggtaagtagatggacctaatgatgagggtgagatgttcacccgccctggtaaactc 518 Query: 405 agtgatcgcttcccgcagccttatccaaatgagcaagcagcccgatttgcaaatggtggg 464 ||||| || || || ||||| ||| ||||||| ||| || | |||| |||||||| Sbjct: 519 agtgaccggtttcctcagccatatgcaaatgaatcagctgcaag-gttgctaatggtgga 577 Query: 465 gcatatcccccagatctcagccttatcacgaaggcaaggcacgatggccagaactacgtg 524 || ||||| || ||||| || ||||| || |||||| | ||| |||| | ||||| || Sbjct: 578 gcgtatcctcctgatctaagtcttataactaaggcacgtcacaatggtccaaactatgtc 637 Query: 525 tttgctcttcttactggttaccatgacccacctgctgg 562 ||||| ||||| |||||||||| ||| || |||||||| Sbjct: 638 tttgcgcttctgactggttaccgtgatccccctgctgg 675
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Plus Query: 225 cgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattgatttca 284 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 9195 cgtggtcatcaagtttatacacaagtctgtgcttcctgtcattccatgtctttgatatca 9254 Query: 285 taccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggctgctgaa 344 ||||||||||||||||| || || || || ||||| || ||||| ||||||||||| Sbjct: 9255 taccgtgatttggttggtgttgcttacacagaagaagaggtaaaggctatggctgctgag 9314 Query: 345 attgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggcaagctg 404 ||||| |||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct: 9315 attgaggtggaagatggccctaatgatgagggtgagatgtttacacgccctggtaaactc 9374 Query: 405 agtgatcgcttcccgcagccttatccaaatga 436 ||||||||||| || ||||| ||| ||||||| Sbjct: 9375 agtgatcgctttcctcagccatatgcaaatga 9406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 508 atggccagaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgtt 566 |||| |||||||| ||||||||||| || || ||||| | |||||| |||||||||||| Sbjct: 9561 atggtcagaactatgtgtttgctctcctaaccggttatcgtgacccccctgctggtgtt 9619
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 107 bits (54), Expect = 4e-20 Identities = 177/218 (81%) Strand = Plus / Minus Query: 219 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 278 ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || Sbjct: 21228 atccgtcgtgggcatcaagtttatcagcaagtctgtgcatcatgccattcaatgtctctg 21169 Query: 279 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 338 || |||||||| || ||||| || || ||||| || || || || | ||||||||||| Sbjct: 21168 atctcataccgagacttggtgggtgtcgcctacacagaggaagaggcaaaggcaatggca 21109 Query: 339 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 398 |||||||| || || || ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 21108 gctgaaatcgaggtagtagatggacctaatgatgagggtgagatgttcacccgccctggt 21049 Query: 399 aagctgagtgatcgcttcccgcagccttatccaaatga 436 || || ||||| || || || ||||| ||| ||||||| Sbjct: 21048 aaactcagtgaccggtttcctcagccatatgcaaatga 21011
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 219 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 278 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 279 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 338 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 339 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 398 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 399 aagctgagtgatcg 412 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 219 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 278 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 399 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 458 Query: 279 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 338 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 459 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 518 Query: 339 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 398 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 519 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 578 Query: 399 aagctgagtgatcg 412 || || |||||||| Sbjct: 579 aaactcagtgatcg 592
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 219 atccgccgtggacatcaagtttaccagcaagtgtgtgcatcttgtcactccatgtcattg 278 ||||| ||||| || |||||||| |||||||| ||||| ||||| || || ||||| || Sbjct: 15356 atccgtcgtggtcaccaagtttatcagcaagtttgtgcgtcttgccattcgatgtctctg 15415 Query: 279 atttcataccgtgatttggttggggtggcctatactgaagaggaaactaaggcaatggct 338 || |||||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct: 15416 atctcataccgagacttggtgggtgttgcctacacagaggaagaggcgaaggccatggca 15475 Query: 339 gctgaaattgaagtggttgatggtcctaatgatgagggtgaaatgttcacgcgtcctggc 398 |||||||| || || |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 15476 gctgaaatcgaggttgttgatggaccaaatgatgagggtgagatgttcacccgacctggt 15535 Query: 399 aagctgagtgatcg 412 || || |||||||| Sbjct: 15536 aaactcagtgatcg 15549
>gb|DQ228959.1| Toxoplasma gondii mitochondrial cytochrome c1 protein (Cytc1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1191 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 360 ggtcctaatgatgagggtgaaatgttcacgcgtcctgg 397 ||||| |||||| |||| ||||||| |||||||||||| Sbjct: 676 ggtccaaatgatcagggcgaaatgtacacgcgtcctgg 713
>gb|AC019201.6| Homo sapiens BAC clone RP11-383I5 from 2, complete sequence Length = 168011 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 agaggaaactaaggcaatggctgctg 342 ||||||||| |||||||||||||||| Sbjct: 158675 agaggaaaccaaggcaatggctgctg 158700
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgcttctggtcttttatgtttt 119 |||||||||||||||||||||| Sbjct: 137042 tgcttctggtcttttatgtttt 137063
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 357 gatggtcctaatgatgagggtgaaatgtt 385 |||||||| |||||||| ||||||||||| Sbjct: 331697 gatggtccaaatgatgacggtgaaatgtt 331725
>gb|AC133796.2| Homo sapiens 3 BAC RP11-10I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 tactgaagaggaaactaaggc 331 ||||||||||||||||||||| Sbjct: 23879 tactgaagaggaaactaaggc 23899
>emb|AJ235271.1|RPXX02 Rickettsia prowazekii strain Madrid E, complete genome; segment 2/4 Length = 312430 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 357 gatggtcctaatgatgagggtgaaatgtt 385 |||||||| |||||||| ||||||||||| Sbjct: 50796 gatggtccaaatgatgatggtgaaatgtt 50824
>gb|AC165069.2| Phakopsora pachyrhizi clone JGIAFNA-645A6, complete sequence Length = 40445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 atgatgagggtgaaatgttca 387 ||||||||||||||||||||| Sbjct: 1063 atgatgagggtgaaatgttca 1083
>ref|XM_629511.1| Dictyostelium discoideum hypothetical protein (DDB0184465), partial mRNA Length = 828 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 207 gatcacgcatcaatccgccgtggacatcaagtttac 242 ||||||||| |||| || ||||| |||||||||||| Sbjct: 172 gatcacgcagcaattcgtcgtggtcatcaagtttac 207
>ref|XM_741478.1| Aspergillus fumigatus Af293 DNA repair protein Rhp26 (Afu4g03840) partial mRNA Length = 3645 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctgaaattgaagtggttga 358 |||||||||||||||||||| Sbjct: 37 gctgaaattgaagtggttga 56
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gtcctggcaagctgagtgat 410 |||||||||||||||||||| Sbjct: 8614 gtcctggcaagctgagtgat 8633
>emb|AL773524.13| Human DNA sequence from clone RP11-250H24 on chromosome 9 Contains a calponin 2 (CNN2) pseudogene and a novel pseudogene, complete sequence Length = 125622 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 taatgatgagggtgaaatgt 384 |||||||||||||||||||| Sbjct: 104070 taatgatgagggtgaaatgt 104089
>ref|XM_786458.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome c-1 (LOC586686), mRNA Length = 1373 Score = 40.1 bits (20), Expect = 7.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 514 agaactacgtgtttgctcttcttactggttaccatgacccacctgctggtgt 565 |||||||| | ||||||||||| ||||| ||| ||| || ||||||||||| Sbjct: 101 agaactacatctttgctcttctgactggatactgtgaacctcctgctggtgt 152
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 gccttatccaaatgagcaagcagc 445 |||||||||||||||||| ||||| Sbjct: 915923 gccttatccaaatgagcaggcagc 915946
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcatctctgctttcttcat 36 |||||||||||||||||||| Sbjct: 59026 ctcatctctgctttcttcat 59007
>gb|AC093742.3| Homo sapiens BAC clone RP11-24M8 from 4, complete sequence Length = 114455 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 actccatgtcattgatttca 284 |||||||||||||||||||| Sbjct: 112262 actccatgtcattgatttca 112281
>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence Length = 186076 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tccatgtcattgatttcata 286 |||||||||||||||||||| Sbjct: 113972 tccatgtcattgatttcata 113991
>gb|AY107216.1| Zea mays PCO114058 mRNA sequence Length = 1442 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tggtcctaatgatgagggtg 378 |||||||||||||||||||| Sbjct: 104 tggtcctaatgatgagggtg 123
>gb|AC105072.9| Mus musculus chromosome 5, clone RP24-167C6, complete sequence Length = 173710 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gtcctggcaagctgagtgat 410 |||||||||||||||||||| Sbjct: 8815 gtcctggcaagctgagtgat 8796
>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592, complete sequence Length = 96561 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gaagaggaaactaaggcaat 334 |||||||||||||||||||| Sbjct: 91895 gaagaggaaactaaggcaat 91876
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gaagaggaaactaaggcaat 334 |||||||||||||||||||| Sbjct: 52406 gaagaggaaactaaggcaat 52387
>dbj|AP006649.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320b, complete sequence Length = 32128 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gaagaggaaactaaggcaat 334 |||||||||||||||||||| Sbjct: 3937 gaagaggaaactaaggcaat 3956 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,819,728 Number of Sequences: 3902068 Number of extensions: 4819728 Number of successful extensions: 91772 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91606 Number of HSP's gapped (non-prelim): 144 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
