>ARGA_HAEDU (Q7VLN8) Amino-acid acetyltransferase (EC 2.3.1.1)|
           (N-acetylglutamate synthase) (AGS) (NAGS)
          Length = 437

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
 Frame = +1

Query: 37  YTFILERGEEVISAATVRIHGTDLAEMPFIGTRGMYRGQGMCHRLLNAIESALCSLNVRR 216
           YT I   G  +  AA +      +AEM  +     YR       LL AI+     LN+ +
Sbjct: 330 YTIIERDGIVIACAALIHYPAEKMAEMACVAVHPDYRDSARGDILLEAIKRRAYKLNIEK 389

Query: 217 LVIPAIPEMQKTWTTVFGFKPVGP--MKKQKTKSFN 318
           L +     +Q  W    GF  + P  +  +K + +N
Sbjct: 390 LFVLTTQTIQ--WFQERGFVQIQPTDLPVEKQRHYN 423

>ITPR_DROME (P29993) Inositol 1,4,5-trisphosphate receptor (InsP3 receptor)|
           (InsP3R)
          Length = 2838

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -3

Query: 456 TCFPKRLRSCLVKFNGVNCPRSGLSIH*SCWQQALLQKTSTMDNQEIKRLRFLLLHRANR 277
           +C PK+ R CL+K     CP +  S     W+ A    +S  D   +KR     LH A  
Sbjct: 50  SCPPKKFRDCLIKI----CPMNRYSAQKQFWKAAKQSASSNTDPNLLKR-----LHHAAE 100

Query: 276 LKTK 265
           ++ K
Sbjct: 101 IEKK 104

>FREM3_MOUSE (Q5H8B9) FRAS1-related extracellular matrix protein 3 precursor (NV|
            domain-containing protein 2)
          Length = 2123

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  LTPVHVSQEFAVGGYPETKDHVTCAL-IESSSGLASNLPPVSDKKTKETISPVS 621
            LTP HV+ E        +KD + C L ++ SSG   NL P    +     +P+S
Sbjct: 1078 LTPQHVNIE----DVDTSKDEILCTLTVQPSSGYLENLAPAPGSEVSRAGNPIS 1127

>FLO9_YEAST (P39712) Flocculation protein FLO9 precursor|
          Length = 1322

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 19/90 (21%), Positives = 36/90 (40%)
 Frame = +1

Query: 391  TSGTVNAVEFDKTASQTFGEASGSLTPVHVSQEFAVGGYPETKDHVTCALIESSSGLASN 570
            TS + +     +T S +   +S S++       ++    P      T      S  + S+
Sbjct: 954  TSSSTSGSSESETGSASSASSSSSISSESPKSTYSSSSLPPVTSATT------SQEITSS 1007

Query: 571  LPPVSDKKTKETISPVSIAGVNLHTSEDDM 660
            LPPV+  KT E  + V++     H   + +
Sbjct: 1008 LPPVTTTKTSEQTTLVTVTSCESHVCTESI 1037

>TRPH_SALTY (O54453) Protein trpH|
          Length = 293

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
 Frame = +1

Query: 394 SGTVNAVEFDKTASQTFGEASGSLTP---VHVSQEFAVGGYPETKDHVTCALIE------ 546
           S T  AV +D  +  T  +  G LTP   VH + E  VG    T DH T A I       
Sbjct: 6   SDTNYAVIYDLHSHTTASD--GLLTPETLVHRAVEMRVGTLAIT-DHDTTAAIPAAREEI 62

Query: 547 SSSGLASNLPPVSDKKTKETISPVSIAGVNLHTSEDDM 660
           S SGLA NL P  +  T      + I G+N+  +   M
Sbjct: 63  SRSGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAM 100

>TRPH_ECOLI (P77766) Protein trpH|
          Length = 293

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
 Frame = +1

Query: 394 SGTVNAVEFDKTASQTFGEASGSLTP---VHVSQEFAVGGYPETKDHVTCALIE------ 546
           S T  AV +D  +  T  +  G LTP   VH + E  VG    T DH T A I       
Sbjct: 2   SDTNYAVIYDLHSHTTASD--GCLTPEALVHRAVEMRVGTLAIT-DHDTTAAIAPAREEI 58

Query: 547 SSSGLASNLPPVSDKKTKETISPVSIAGVNL 639
           S SGLA NL P  +  T      + I G+N+
Sbjct: 59  SRSGLALNLIPGVEISTVWENHEIHIVGLNI 89

>CLPB_AQUAE (O67588) Chaperone clpB|
          Length = 1006

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 20/157 (12%)
 Frame = +1

Query: 232 IPEMQKTWTTVFGFKPVGPMKKQKTKSFNLLIIHGTGLLEKCLLPTALVNRQTTSGTVNA 411
           + +++K+ +TVF  + V    + K            GL+ K L  + L+ +    G    
Sbjct: 155 LEQVEKSLSTVFAPEDVKAFLENKLSI--------DGLIRKALEKSPLIEQVKELGISPD 206

Query: 412 VEFDKTASQTFG-----EASGSLTPV-HVSQEFAV--GGYPETKDHVTCALIESSSGLAS 567
              DK A + FG     + S  LT V   +Q+ AV  G       H++ ALIE+   +  
Sbjct: 207 RIIDKVAEKVFGKKPTFDYSQYLTQVLEKAQDKAVSEGEAQVQPSHISAALIEAKDTIGG 266

Query: 568 NL------------PPVSDKKTKETISPVSIAGVNLH 642
            L              V+ +  +E  SP+   GVNL+
Sbjct: 267 KLINQVLGGEKEMKKDVTQELKEEEKSPLERFGVNLN 303

>RL11_MYCMO (Q6KIF0) 50S ribosomal protein L11|
          Length = 199

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = -1

Query: 407 LTVPEVVCRFTRAVGSKHFSRRPVPWIIKRLKDFVFCFFIGPTGLKPKTVVQVFCISGMA 228
           + +PE   +F  A   +     PV  I+ + K F F  F  PT    K    +   S  +
Sbjct: 33  IVMPEFTKQFNDATRERSGEPVPVQIIVYKDKSFDFKLFTAPTSFMLKKAAGIKSGSANS 92

Query: 227 GITSLRTLREQRADSIA 177
             T + T+++ + + IA
Sbjct: 93  KTTIVATIKKSQLEDIA 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,683,218
Number of Sequences: 219361
Number of extensions: 1928292
Number of successful extensions: 5597
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5595
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)