ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20k12 |
|---|---|
| Clone Library Name | barley_pub |
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 216 bits (550), Expect = 3e-56 Identities = 107/151 (70%), Positives = 123/151 (81%) Frame = +3 Query: 54 MSSEAAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQ 233 M+ +K VVPESVL KRKREE W + E RK+IF RAKQY++EY + Sbjct: 1 MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60 Query: 234 DKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLK 413 ++EL+QLKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLK Sbjct: 61 ERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 120 Query: 414 VNKATINMLRRVEPYVAYGYPNLKSVRELIY 506 VNKATINMLRRVEPYV YGYPNLKSV+ELIY Sbjct: 121 VNKATINMLRRVEPYVTYGYPNLKSVKELIY 151
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 213 bits (541), Expect = 3e-55 Identities = 105/146 (71%), Positives = 122/146 (83%) Frame = +3 Query: 69 AKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELV 248 +KVVVPESVL KRKREE W + ENRK+IF RA+QY++EY ++KEL+ Sbjct: 4 SKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELI 63 Query: 249 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 428 LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT Sbjct: 64 SLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT 123 Query: 429 INMLRRVEPYVAYGYPNLKSVRELIY 506 +NMLRRVEPYV YG+PNLKSV+ELIY Sbjct: 124 MNMLRRVEPYVTYGFPNLKSVKELIY 149
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 211 bits (536), Expect = 1e-54 Identities = 105/146 (71%), Positives = 120/146 (82%) Frame = +3 Query: 69 AKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELV 248 +KVVVPESVL K KR+E W S E RK+IF RA+QYA+EY +D EL+ Sbjct: 4 SKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELI 63 Query: 249 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 428 +LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT Sbjct: 64 RLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT 123 Query: 429 INMLRRVEPYVAYGYPNLKSVRELIY 506 +NMLRRVEPYV YGYPNLKSV+ELIY Sbjct: 124 VNMLRRVEPYVTYGYPNLKSVKELIY 149
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 150 bits (379), Expect = 2e-36 Identities = 72/144 (50%), Positives = 102/144 (70%) Frame = +3 Query: 75 VVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 254 V+VPE++L KRK + + E KVIF+RA++Y +EY ++E ++L Sbjct: 12 VLVPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVIFSRAEKYVKEYREAEREQIRL 71 Query: 255 KREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATIN 434 +REA++ G FYV E KL+FV+RI+GI+ M PK +K+LQLLRL QI NGVF+++ KAT Sbjct: 72 RREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAE 131 Query: 435 MLRRVEPYVAYGYPNLKSVRELIY 506 +LR VEPY+A+GYPNL SVR+L+Y Sbjct: 132 LLRIVEPYIAFGYPNLASVRQLVY 155
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 146 bits (369), Expect = 3e-35 Identities = 74/144 (51%), Positives = 101/144 (70%) Frame = +3 Query: 75 VVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 254 V+VPE++L KRK +E + E R VIF RA+ Y +EY ++E ++L Sbjct: 11 VLVPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRL 70 Query: 255 KREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATIN 434 +R A+ G F++ EAKL+F++RI+GIN + PK +KILQLLRL QI NGVF++V KAT Sbjct: 71 QRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAE 130 Query: 435 MLRRVEPYVAYGYPNLKSVRELIY 506 M++ VEP+VAYGYPNLKSV+ELIY Sbjct: 131 MIKIVEPWVAYGYPNLKSVKELIY 154
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 143 bits (360), Expect = 3e-34 Identities = 72/142 (50%), Positives = 97/142 (68%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPES+L KR + ++ V F RA++Y EY ++E ++L R Sbjct: 11 VPESILKKRATSQKKAXDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYHKTEREAIRLNR 70 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 A+ G FYV P AK+ FV+RIRGIN + PK +K+L+LLRL Q+ NGVF+K+NKA+INML Sbjct: 71 IAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINML 130 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 + VEPYVAYG+PNLKS++ELIY Sbjct: 131 KLVEPYVAYGFPNLKSIKELIY 152
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 142 bits (359), Expect = 4e-34 Identities = 72/142 (50%), Positives = 96/142 (67%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPE+VL +RK+ + E + F RA++Y +EY KE ++LKR Sbjct: 10 VPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKEGLRLKR 69 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 EA KG FYV E K+ FVVRIRGIN +HPK +K LQ+LRLRQI NGVF+K+NKAT+ +L Sbjct: 70 EAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLL 129 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 R +EPYVA+GYPN K++ +L+Y Sbjct: 130 RIIEPYVAWGYPNNKTIHDLLY 151
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 142 bits (359), Expect = 4e-34 Identities = 78/155 (50%), Positives = 99/155 (63%), Gaps = 2/155 (1%) Frame = +3 Query: 48 VEMSSEAAKVV--VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEE 221 +E + E K V VPE++ KRK RK+I+ +AK Y +E Sbjct: 1 MEGAEEKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60 Query: 222 YDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNG 401 Y + +++ R AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNG 120 Query: 402 VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIY 506 F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIY Sbjct: 121 TFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIY 155
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 141 bits (356), Expect = 9e-34 Identities = 73/142 (51%), Positives = 93/142 (65%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 36 VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 95 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INML Sbjct: 96 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML 155 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 R VEPY+A+GYPNLKSV ELIY Sbjct: 156 RIVEPYIAWGYPNLKSVNELIY 177
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 141 bits (355), Expect = 1e-33 Identities = 73/142 (51%), Positives = 93/142 (65%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 14 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 73 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INML Sbjct: 74 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML 133 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 R VEPY+A+GYPNLKSV ELIY Sbjct: 134 RIVEPYIAWGYPNLKSVNELIY 155
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 141 bits (355), Expect = 1e-33 Identities = 72/142 (50%), Positives = 93/142 (65%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 26 VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 85 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML Sbjct: 86 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNML 145 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 R VEPY+A+GYPNLKSV ELIY Sbjct: 146 RIVEPYIAWGYPNLKSVNELIY 167
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 139 bits (349), Expect = 6e-33 Identities = 71/145 (48%), Positives = 96/145 (66%) Frame = +3 Query: 72 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 251 ++ PES+L K+K +E + R++I RA+ Y EY ++E ++ Sbjct: 13 QIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIE 72 Query: 252 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 431 L R+AR +G +YV E KL+FV+RIRGIN + PK +KI+QLLRL QI NGVF+K NKAT Sbjct: 73 LGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATK 132 Query: 432 NMLRRVEPYVAYGYPNLKSVRELIY 506 ML+ VEPYV YG PNLK+VREL+Y Sbjct: 133 EMLQVVEPYVTYGIPNLKTVRELLY 157
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 136 bits (343), Expect = 3e-32 Identities = 66/147 (44%), Positives = 94/147 (63%) Frame = +3 Query: 66 AAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKEL 245 A K++ PES L K K ++ + E R I R Y +EY+ ++ + Sbjct: 2 ADKILTPESQLKKSKAQQKSAEQVAAERAARKAANKEKRAAILERNAAYHKEYETAERAV 61 Query: 246 VQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKA 425 +Q KREA+ G +YV + KL+FV+RI+GIN + PK +K+LQLLRL QI +GVF+KV KA Sbjct: 62 IQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKA 121 Query: 426 TINMLRRVEPYVAYGYPNLKSVRELIY 506 T +LR VEPYVAYGYP+ ++R+L+Y Sbjct: 122 TTELLRLVEPYVAYGYPSYSTIRQLVY 148
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 134 bits (337), Expect = 1e-31 Identities = 72/142 (50%), Positives = 91/142 (64%) Frame = +3 Query: 81 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 260 VPES L K++ +K RA++Y EY ++ ++L+R Sbjct: 17 VPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRR 76 Query: 261 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 440 A+ + FYV EAKL FVVRIRGIN + PK +K+LQL RLRQI NGVF+K+NKATINML Sbjct: 77 LAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINML 136 Query: 441 RRVEPYVAYGYPNLKSVRELIY 506 R EPY+ +GYPNLKSVRELIY Sbjct: 137 RIAEPYITWGYPNLKSVRELIY 158
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 134 bits (337), Expect = 1e-31 Identities = 62/147 (42%), Positives = 95/147 (64%) Frame = +3 Query: 66 AAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKEL 245 A K++ PES L K K ++ + E R +I R Y +EY+ ++ + Sbjct: 2 AEKILTPESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIILERNAAYQKEYETAERNI 61 Query: 246 VQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKA 425 +Q KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KA Sbjct: 62 IQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKA 121 Query: 426 TINMLRRVEPYVAYGYPNLKSVRELIY 506 T+ +L+ +EPYVAYGYP+ ++R+L+Y Sbjct: 122 TLELLKLIEPYVAYGYPSYSTIRQLVY 148
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 133 bits (335), Expect = 2e-31 Identities = 70/146 (47%), Positives = 94/146 (64%) Frame = +3 Query: 69 AKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELV 248 A + PES+L K K ++ + R++I RA+ Y EY A ++E + Sbjct: 11 ASIFAPESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAYEAEYRAAEREQI 70 Query: 249 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 428 +L R+AR +G ++V E KL+FVVRIRGIN + PK +KI+QLLRL QI NG+F+K NKA Sbjct: 71 ELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAI 130 Query: 429 INMLRRVEPYVAYGYPNLKSVRELIY 506 ML+ VEPYV YG PN K+VRELIY Sbjct: 131 KEMLQVVEPYVTYGIPNHKTVRELIY 156
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 133 bits (334), Expect = 3e-31 Identities = 61/145 (42%), Positives = 94/145 (64%) Frame = +3 Query: 72 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 251 K++ PES L K K ++ + E R +I R Y +EY+ ++ ++Q Sbjct: 4 KILTPESQLKKTKAQQKTAEQIAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQ 63 Query: 252 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 431 KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KAT+ Sbjct: 64 AKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATL 123 Query: 432 NMLRRVEPYVAYGYPNLKSVRELIY 506 +L+ +EPYVAYGYP+ ++R+L+Y Sbjct: 124 ELLKLIEPYVAYGYPSYSTIRQLVY 148
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 131 bits (330), Expect = 9e-31 Identities = 62/146 (42%), Positives = 94/146 (64%) Frame = +3 Query: 69 AKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELV 248 A + PE+++ K K ++ + E RK+IF RA Y +EY ++ ++ Sbjct: 2 ASTLKPETLVKKSKAQQKTAEERAAAKVVRQASNQEKRKIIFDRAAAYQKEYTDAERAVI 61 Query: 249 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 428 + KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI GVF+++ KAT Sbjct: 62 KAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKAT 121 Query: 429 INMLRRVEPYVAYGYPNLKSVRELIY 506 +L+ EPY+AYGYPNL ++R L+Y Sbjct: 122 SELLKLAEPYIAYGYPNLSTIRHLVY 147
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 130 bits (326), Expect = 3e-30 Identities = 64/147 (43%), Positives = 93/147 (63%) Frame = +3 Query: 66 AAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKEL 245 A K++ PES L K K +E + + R I R + +EY+A ++ + Sbjct: 3 AEKILKPESQLKKAKYDEKKSEEFLKARAARRVANKQKRAAILERNAAHQKEYEAAERAV 62 Query: 246 VQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKA 425 + KREA+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI +G F+KV KA Sbjct: 63 IDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKA 122 Query: 426 TINMLRRVEPYVAYGYPNLKSVRELIY 506 T +L+ +EPYVAYGYP+ +VR+L+Y Sbjct: 123 TSELLKLIEPYVAYGYPSYSTVRQLVY 149
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 123 bits (309), Expect = 2e-28 Identities = 66/141 (46%), Positives = 85/141 (60%) Frame = +3 Query: 84 PESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKRE 263 PE +L KRK E +NRK F RA+ + Y +++E ++L R Sbjct: 15 PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRS 74 Query: 264 ARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLR 443 A+ KG +V E KLLFV+RI G+ M PK +K+L+LLRL +I N VF++ NKA MLR Sbjct: 75 AKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLR 134 Query: 444 RVEPYVAYGYPNLKSVRELIY 506 VEPYV YG PNL SVRELIY Sbjct: 135 IVEPYVMYGIPNLHSVRELIY 155
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 87.8 bits (216), Expect = 2e-17 Identities = 49/142 (34%), Positives = 78/142 (54%) Frame = +3 Query: 78 VVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLK 257 +VPE++L KRK + + + + F R + + + Q +++V+L+ Sbjct: 11 LVPENLLKKRKAYQALKATQAEQALLAKKEQRKGKGLRFKRLESFLHDSWRQKRDMVRLR 70 Query: 258 REARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINM 437 R + + L FVVRI I+ + ++ + LRL++IF+GVF+KV + M Sbjct: 71 RLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKM 130 Query: 438 LRRVEPYVAYGYPNLKSVRELI 503 LR VEPYV +G+PNLKSVRELI Sbjct: 131 LRIVEPYVTWGFPNLKSVRELI 152
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 85.5 bits (210), Expect = 8e-17 Identities = 49/142 (34%), Positives = 77/142 (54%) Frame = +3 Query: 78 VVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLK 257 +VPE++L KRK + + + + F R + + + Q ++ V+L+ Sbjct: 11 LVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQKRDKVRLR 70 Query: 258 REARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINM 437 R + + L FVVRI I+ + ++ + LRL++IF+GVF+KV + M Sbjct: 71 RLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKM 130 Query: 438 LRRVEPYVAYGYPNLKSVRELI 503 LR VEPYV +G+PNLKSVRELI Sbjct: 131 LRIVEPYVTWGFPNLKSVRELI 152
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 69.7 bits (169), Expect = 4e-12 Identities = 40/141 (28%), Positives = 76/141 (53%) Frame = +3 Query: 84 PESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKRE 263 P+S + K++ E + N + ++ +Y Q++E+ L+++ Sbjct: 9 PQSSIRKKEYEARMSRIRSRQEKEFRERKSANARYAEETTEKLLNKYYEQEREI--LEKK 66 Query: 264 ARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLR 443 + MK GFYV EA+ V+ IR PK +K+L+L RL++I V ++ NK+T ML+ Sbjct: 67 SSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQ 126 Query: 444 RVEPYVAYGYPNLKSVRELIY 506 ++ +VA+G ++ +R+L+Y Sbjct: 127 IIKDHVAFGTIGMELLRKLVY 147
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 63.9 bits (154), Expect = 2e-10 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 2/105 (1%) Frame = +3 Query: 195 ARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMH--PKTKKIL 368 A ++ ++ D +D+E L RE + G E LLFV+R++G A+ K K+L Sbjct: 105 ATSESELQDVDEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVL 159 Query: 369 QLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELI 503 LLRL ++ GVF+K+ K +L+ V PY+ G P+L S+R LI Sbjct: 160 SLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLI 204
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 63.2 bits (152), Expect = 4e-10 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 16/155 (10%) Frame = +3 Query: 84 PESVLLKRK---REELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 254 PE +L KRK R+ L + R F RA+ Y + + E ++ Sbjct: 8 PEILLRKRKNNDRKRLEKQEQARQRQLEQKKKNDQRSKKFVRAETLVSNYKSNELENKRI 67 Query: 255 KREARMKGGFYVSP---------EAKLLFVVRI----RGINAMHPKTKKILQLLRLRQIF 395 K + + AKLLF++RI +G+ + K +K+L LLRL + Sbjct: 68 KHITKFEKQLQADKISQAKEDDESAKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPN 126 Query: 396 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVREL 500 GVF+K+ AT+ +L+ + PY+ G P+L S+R+L Sbjct: 127 TGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKL 161
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 58.5 bits (140), Expect = 1e-08 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 2/71 (2%) Frame = +3 Query: 297 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 470 E +LLFV+R++G + A P K +IL LRL ++ VF+K+ + T ++L+ + PYV G Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192 Query: 471 YPNLKSVRELI 503 P+LKS+R LI Sbjct: 193 KPSLKSIRSLI 203
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Frame = +3 Query: 306 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 479 LLF+VR+RG A++ K KIL LLRL + GVF+K+ K +L+ + PYV G P+ Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200 Query: 480 LKSVRELI 503 L S+R LI Sbjct: 201 LSSIRSLI 208
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 54.7 bits (130), Expect = 1e-07 Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Frame = +3 Query: 300 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 473 A LLFVVR+RG A + K ++L LLRL ++ GVF+++ +L+ V PYV G Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169 Query: 474 PNLKSVRELI 503 P+L S+R L+ Sbjct: 170 PSLASIRALV 179
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 50.4 bits (119), Expect = 3e-06 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Frame = +3 Query: 291 SPEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 464 S + L +VR G + A P K +K+LQLLRL +I +GVF+K+ + +L+ + PY Sbjct: 27 SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86 Query: 465 YGYPNLKSVRELI 503 P+L++VR+L+ Sbjct: 87 IXQPSLQTVRQLV 99
>RL30_ARCFU (O28375) 50S ribosomal protein L30P| Length = 152 Score = 40.8 bits (94), Expect = 0.002 Identities = 23/63 (36%), Positives = 39/63 (61%) Frame = +3 Query: 315 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 494 VVR+RG +H K K+ L++LRL + ++ V + + ML+ V+ YVAYG N +++ Sbjct: 4 VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLA 63 Query: 495 ELI 503 L+ Sbjct: 64 LLL 66
>RL30_SULAC (O05642) 50S ribosomal protein L30P| Length = 156 Score = 36.6 bits (83), Expect = 0.040 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +3 Query: 303 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 482 +L+ V+RIRG A + L +LRL+ FN + + + ML V YV +G N Sbjct: 3 ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62 Query: 483 KSVRELI 503 + +R L+ Sbjct: 63 EGLRLLV 69
>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P| Length = 158 Score = 36.6 bits (83), Expect = 0.040 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +3 Query: 303 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 482 +LL ++RIRG + L +LRLR FN + + ML +V PY+ +G + Sbjct: 3 ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDP 62 Query: 483 KSVRELI 503 +++ LI Sbjct: 63 DTLKLLI 69
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Frame = +3 Query: 309 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 485 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 486 SVRELI 503 ++ +LI Sbjct: 63 TLAKLI 68
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Frame = +3 Query: 309 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 485 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 486 SVRELI 503 ++ +LI Sbjct: 63 TLAKLI 68
>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P| Length = 155 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Frame = +3 Query: 309 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 485 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 486 SVRELI 503 ++ +LI Sbjct: 63 TLAKLI 68
>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P| Length = 162 Score = 33.9 bits (76), Expect = 0.26 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +3 Query: 306 LLFVVRIRGINAMHPKTKKILQLLRLRQIFN-GVFLKVNKATINMLRRVEPYVAYGYPNL 482 L V+RIRG + P K L LLRLR+ + ++ +MLR VE + YG Sbjct: 6 LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEE 65 Query: 483 KSVRELI 503 + + EL+ Sbjct: 66 RVLEELL 72
>RL30_METVA (P14035) 50S ribosomal protein L30P| Length = 154 Score = 33.9 bits (76), Expect = 0.26 Identities = 18/63 (28%), Positives = 35/63 (55%) Frame = +3 Query: 315 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 494 VVR+RG + +++LRL ++ + V + N M+++V+ YV YG + +++ Sbjct: 5 VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLV 64 Query: 495 ELI 503 LI Sbjct: 65 SLI 67
>RL30_METTH (O26132) 50S ribosomal protein L30P| Length = 152 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/63 (23%), Positives = 36/63 (57%) Frame = +3 Query: 315 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 494 VVR+RG + +++LRL +I + V ++ + + ML++ + Y+ +G + +++ Sbjct: 4 VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLT 63 Query: 495 ELI 503 +I Sbjct: 64 AMI 66
>RL30_METJA (P54046) 50S ribosomal protein L30P| Length = 154 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/63 (28%), Positives = 35/63 (55%) Frame = +3 Query: 315 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 494 V+RIRG + L++LRL ++ + V + + ML++V+ YV +G + ++ Sbjct: 5 VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLV 64 Query: 495 ELI 503 +LI Sbjct: 65 KLI 67
>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)| Length = 154 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/63 (22%), Positives = 34/63 (53%) Frame = +3 Query: 315 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 494 +V++RG MH + L++L + + + + A M+ +V +VA+G P+ +++ Sbjct: 4 LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLE 63 Query: 495 ELI 503 ++ Sbjct: 64 TVL 66
>POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 674 Score = 30.0 bits (66), Expect = 3.7 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 17/104 (16%) Frame = +3 Query: 216 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGIN------AMH 347 EE+D Q KEL+ LK + M F V+ EA K VV + +N A + Sbjct: 255 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 314 Query: 348 PKTK-KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 476 P K ++L L+R ++IF+ K + + + P A+ P Sbjct: 315 PPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 358
>NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 637 Score = 29.3 bits (64), Expect = 6.4 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -3 Query: 460 TYGSTLRSMLMVALLTLRNTPLNICLKRKSWRIFLVFGCMALI 332 T ++++S+ + L L NTPLNI L + FLVF +ALI Sbjct: 85 TCNNSIQSINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALI 127
>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17) Length = 295 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 7/45 (15%) Frame = -2 Query: 461 NIWLDPAEHV-------DGGLVNLEEHSIEYLSQTQKLEDLLGLW 348 N+W+ P HV DGGL L E S +L Q Q LGLW Sbjct: 120 NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLW 164
>POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.3 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 216 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 347 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 319 Query: 348 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 476 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363
>POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.3 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 216 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 347 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319 Query: 348 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 476 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363
>POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.3 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 216 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 347 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319 Query: 348 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 476 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,882,796 Number of Sequences: 219361 Number of extensions: 868358 Number of successful extensions: 2873 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 2839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2868 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
