>K0323_MOUSE (Q80U38) Protein KIAA0323|
          Length = 671

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 173 LQHLHGAQSSHPA--GPPRRTQCGWWQG-ADPQRARRERGDKQQQG 301
           LQ LH   +S P    PP   +  W  G  D  R R +RGDKQQ G
Sbjct: 340 LQRLHNGSASPPRVPSPPPAPEPPWPCGDRDRDRDRGDRGDKQQAG 385

>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney|
            disease protein 1)
          Length = 4303

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 161  AHVCLQHLHGAQSSHPAGPPRRTQ 232
            AHV L ++HG QSS   GPPR  Q
Sbjct: 3728 AHVLLPYVHGNQSSPELGPPRLRQ 3751

>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 191 AQSSHPAGPPRRTQCGWWQGADPQRARRERGDKQQQG 301
           +Q   P GPPR ++ G    A  QR R  RG +  +G
Sbjct: 530 SQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGNRG 566

>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 139 GCASKRKSSCLPTTSPWC-SEQPSSWAS*THSVRLVARR*PPT 264
           GC +K  ++C P T P C S   ++  + T +      R PPT
Sbjct: 27  GCPTKATTTCAPPTKPTCKSTSTTTTTTTTTTTTTTTTRAPPT 69

>TR19L_MACFA (Q9N092) Tumor necrosis factor receptor superfamily member 19L|
           precursor (Receptor expressed in lymphoid tissues)
          Length = 430

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 303 RPCCCLSPRSLRARWGSAPCHQPH 232
           RPC    P +  A WGS+PC QPH
Sbjct: 49  RPC---PPGTFSAAWGSSPC-QPH 68

>TR19L_HUMAN (Q969Z4) Tumor necrosis factor receptor superfamily member 19L|
           precursor (Receptor expressed in lymphoid tissues)
          Length = 430

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 303 RPCCCLSPRSLRARWGSAPCHQPH 232
           RPC    P +  A WGS+PC QPH
Sbjct: 49  RPC---PPGTFSAAWGSSPC-QPH 68

>CB010_HUMAN (Q7Z570) Protein C2orf10|
          Length = 1209

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 260 GGQRLATSRTECV*EAQLDGCSEHHGDVVGKHELLRLEAQPIV 132
           G   L  SRT C  + ++  CS+ H  +V ++++ R+     V
Sbjct: 712 GKHNLTYSRTYCCWKTKMSSCSQDHRSLVLQNDMKRMSQNQAV 754

>TTC16_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat protein|
           16)
          Length = 872

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 158 RAHVCLQHLHGAQSSHPAGPPRRTQCGWWQGADPQRARRERGDKQQQGR 304
           + H+C + LHGA   +P  P  R        A  Q+AR++ G    QGR
Sbjct: 219 KPHLCYRDLHGALLLNPKHPQARMLL-QKMVAQAQQARQDAGILAVQGR 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,093,344
Number of Sequences: 219361
Number of extensions: 682748
Number of successful extensions: 1644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)