>emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1
Contains the KIAA0110 gene, the FLJ30845 gene, the MRPS18A
gene for mitochondrial ribosomal protein S18A, a
pseudogene similar to OPA-interacting protein (OIP21) a
novel gene, the VEGF gene for vascular endothelial growth
factor and two CpG islands, complete sequence
Length = 172033
Score = 40.1 bits (20), Expect = 8.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tctctttgtgactggtttat 74
||||||||||||||||||||
Sbjct: 67161 tctctttgtgactggtttat 67180
>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
Contains the 3' end of a novel gene, a protein associated
with PRK1 (AWP1) pseudogene, a novel gene (KIAA0375), a
ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene,
a novel gene, a ribosomal protein S29 (RPS29) pseudogene
and a CpG island, complete sequence
Length = 153826
Score = 40.1 bits (20), Expect = 8.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tctctttgtgactggtttat 74
||||||||||||||||||||
Sbjct: 52867 tctctttgtgactggtttat 52886
>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence
Length = 209547
Score = 40.1 bits (20), Expect = 8.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 598 atcctactccccctatgaaa 617
||||||||||||||||||||
Sbjct: 150320 atcctactccccctatgaaa 150301
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,562,003
Number of Sequences: 3902068
Number of extensions: 4562003
Number of successful extensions: 80758
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80626
Number of HSP's gapped (non-prelim): 128
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)