| Clone Name | bags20j17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506198.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.29 mRNA Length = 1626 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 526 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 585 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 586 tctttgaagaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 645 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 646 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 705 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 706 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 765 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 766 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 825 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 826 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 885 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 886 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 945 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 946 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 1005 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1006 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 1061
>ref|XM_476866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2005 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 867 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 926 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 927 tctttgaagaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 986 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 987 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 1046 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1047 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 1106 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 1107 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 1166 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 1167 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 1226 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 1227 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 1286 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1287 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 1346 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1347 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 1402
>dbj|AK070512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055B17, full insert sequence Length = 2023 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 885 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 944 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 945 tctttgaagaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 1004 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 1005 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 1064 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1065 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 1124 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 1125 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 1184 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 1185 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 1244 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 1245 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 1304 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 1305 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 1364 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1365 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 1420
>dbj|AK066918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089N03, full insert sequence Length = 1625 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 525 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 584 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 585 tctttgaagaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 644 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 645 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 704 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 705 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 764 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 765 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 824 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 825 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 884 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 885 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 944 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 945 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 1004 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1005 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 1060
>dbj|AK062119.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C09, full insert sequence Length = 1328 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 231 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 290 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 291 tctttgaggaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 350 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 351 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 410 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 411 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 470 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 471 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 530 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 531 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 590 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 591 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 650 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 651 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 710 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 711 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 766
>dbj|AK060932.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B03, full insert sequence Length = 1105 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 5 atagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcatcgac 64 ||||| |||||||| |||||||| |||||||| || ||||| |||||||||||||| ||| Sbjct: 71 atagctgcaaggagccgtggcagcgatatagcagtcattgccaagatcgagagcattgac 130 Query: 65 tctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccagaggg 124 ||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||| Sbjct: 131 tctttgaagaacttggaggagataatccgtgcttcagatggtgccatggtagcccgaggg 190 Query: 125 gacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagttaaa 184 || |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 191 gatatgggtgcacaaattcccttggagcaagtcccctcagtacaacaaaagatagttaaa 250 Query: 185 ctgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgatgatt 244 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 251 ctgtgcaggcagctcaacaagccagtcattgttgcgtcgcagcttcttgaatcgatgatt 310 Query: 245 gagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccaccaacgt 304 |||||||||| ||||||||||| || ||||||||||||||||||||||| | || ||| Sbjct: 311 gagtatcctacgcccaccagggccgaggttgctgatgtttctgaagcagttcgtcagcgt 370 Query: 305 gcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggcgctc 364 || ||||| | |||||||| || || || |||||||| ||||||||||| || || || Sbjct: 371 gcagatgcgcttatgctttcaggtgagtcagcaatggggagatatccagagaaagctctt 430 Query: 365 agtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagcaccat 424 ||||||||| | | ||||||| |||||||||| | |||||||| |||||||||| |||| Sbjct: 431 agtgtcctccggagtgttagcctaaggattgagaagtggtggagagaggagaagcgccat 490 Query: 425 gagccactagaacttgaggacgtttcgtcttctttctctgacaaaatatcagaagagatc 484 ||| ||| |||||| | || ||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 491 gaggaactggaacttaaagatgtttcatcttccttctctgacaaaatatcagaagaaatc 550 Query: 485 tgcatttctgctgctaaaatggctaacaagttggaagtagatgccgttttcgtcta 540 |||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 551 tgcatttcggccgctaaaatggccaacaaattggaggtagatgccgttttcgtcta 606
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 474 bits (239), Expect = e-130 Identities = 422/483 (87%) Strand = Plus / Plus Query: 29 gatatagcggttattgcaaagatcgagagcatcgactctttgacaaacttggaggagatc 88 |||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||| Sbjct: 4302379 gatatagcagtcattgccaagatcgagagcattgactctttgaagaacttggaggagata 4302438 Query: 89 atccgtgcatcggatggtgccatggtagccagaggggacttgggagcacaaattcccttg 148 |||||||| || |||||||||||||||||| ||||||| |||| ||||||||||||||| Sbjct: 4302439 atccgtgcttcagatggtgccatggtagcccgaggggatatgggtgcacaaattcccttg 4302498 Query: 149 gagcaggtcccttcaatacaacaaaagatagttaaactgtgcaggcagctaaacaagcca 208 ||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4302499 gagcaagtcccctcagtacaacaaaagatagttaaactgtgcaggcagctcaacaagcca 4302558 Query: 209 gtcattgttgcttcccagcttcttgaatcgatgattgagtatcctatacccaccagggct 268 ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4302559 gtcattgttgcgtcgcagcttcttgaatcgatgattgagtatcctacgcccaccagggcc 4302618 Query: 269 gaagttgctgatgtttctgaagcagtccaccaacgtgcggatgctttaatgctttctggc 328 || ||||||||||||||||||||||| | || ||||| ||||| | |||||||| || Sbjct: 4302619 gaggttgctgatgtttctgaagcagttcgtcagcgtgcagatgcgcttatgctttcaggt 4302678 Query: 329 gaatcggcaatgggcagatatccagataaggcgctcagtgtcctcagtaatgttagctta 388 || || |||||||| ||||||||||| || || || ||||||||| | | ||||||| || Sbjct: 4302679 gagtcagcaatggggagatatccagagaaagctcttagtgtcctccggagtgttagccta 4302738 Query: 389 aggattgaaagatggtggagggaggagaagcaccatgagccactagaacttgaggacgtt 448 |||||||| | |||||||| |||||||||| ||||||| ||| |||||| | || ||| Sbjct: 4302739 aggattgagaagtggtggagagaggagaagcgccatgaggaactggaacttaaagatgtt 4302798 Query: 449 tcgtcttctttctctgacaaaatatcagaagagatctgcatttctgctgctaaaatggct 508 || ||||| ||||||||||||||||||||||| ||||||||||| || |||||||||| | Sbjct: 4302799 tcatcttccttctctgacaaaatatcagaagaaatctgcatttcggccgctaaaatgggt 4302858 Query: 509 aac 511 ||| Sbjct: 4302859 aac 4302861 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 509 aacaagttggaagtagatgccgttttcgtcta 540 ||||| ||||| |||||||||||||||||||| Sbjct: 4303035 aacaaattggaggtagatgccgttttcgtcta 4303066
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 474 bits (239), Expect = e-130 Identities = 422/483 (87%) Strand = Plus / Plus Query: 29 gatatagcggttattgcaaagatcgagagcatcgactctttgacaaacttggaggagatc 88 |||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||| Sbjct: 123433 gatatagcagtcattgccaagatcgagagcattgactctttgaagaacttggaggagata 123492 Query: 89 atccgtgcatcggatggtgccatggtagccagaggggacttgggagcacaaattcccttg 148 |||||||| || |||||||||||||||||| ||||||| |||| ||||||||||||||| Sbjct: 123493 atccgtgcttcagatggtgccatggtagcccgaggggatatgggtgcacaaattcccttg 123552 Query: 149 gagcaggtcccttcaatacaacaaaagatagttaaactgtgcaggcagctaaacaagcca 208 ||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123553 gagcaagtcccctcagtacaacaaaagatagttaaactgtgcaggcagctcaacaagcca 123612 Query: 209 gtcattgttgcttcccagcttcttgaatcgatgattgagtatcctatacccaccagggct 268 ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123613 gtcattgttgcgtcgcagcttcttgaatcgatgattgagtatcctacgcccaccagggcc 123672 Query: 269 gaagttgctgatgtttctgaagcagtccaccaacgtgcggatgctttaatgctttctggc 328 || ||||||||||||||||||||||| | || ||||| ||||| | |||||||| || Sbjct: 123673 gaggttgctgatgtttctgaagcagttcgtcagcgtgcagatgcgcttatgctttcaggt 123732 Query: 329 gaatcggcaatgggcagatatccagataaggcgctcagtgtcctcagtaatgttagctta 388 || || |||||||| ||||||||||| || || || ||||||||| | | ||||||| || Sbjct: 123733 gagtcagcaatggggagatatccagagaaagctcttagtgtcctccggagtgttagccta 123792 Query: 389 aggattgaaagatggtggagggaggagaagcaccatgagccactagaacttgaggacgtt 448 |||||||| | |||||||| |||||||||| ||||||| ||| |||||| | || ||| Sbjct: 123793 aggattgagaagtggtggagagaggagaagcgccatgaggaactggaacttaaagatgtt 123852 Query: 449 tcgtcttctttctctgacaaaatatcagaagagatctgcatttctgctgctaaaatggct 508 || ||||| ||||||||||||||||||||||| ||||||||||| || |||||||||| | Sbjct: 123853 tcatcttccttctctgacaaaatatcagaagaaatctgcatttcggccgctaaaatgggt 123912 Query: 509 aac 511 ||| Sbjct: 123913 aac 123915 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 509 aacaagttggaagtagatgccgttttcgtcta 540 ||||| ||||| |||||||||||||||||||| Sbjct: 124089 aacaaattggaggtagatgccgttttcgtcta 124120
>gb|AY106719.1| Zea mays PCO096996 mRNA sequence Length = 1611 Score = 180 bits (91), Expect = 3e-42 Identities = 337/419 (80%) Strand = Plus / Plus Query: 1 ctacatagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcat 60 ||||||||| |||||||| ||||| ||||| || || || ||||| || ||||||||||| Sbjct: 471 ctacatagctgcaaggagccgtggaagtgacatggcagtcattgcgaaaatcgagagcat 530 Query: 61 cgactctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccag 120 ||||||| | | ||| |||||||||||||||| || || || || |||||||||||||| Sbjct: 531 cgactctctaaagaacctggaggagatcatccgagcgtcagacggcgccatggtagccag 590 Query: 121 aggggacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagt 180 ||||||| |||| || || ||||| ||||||||||||| || ||||| |||||||| || Sbjct: 591 aggggacatgggggcgcaggttcccctggagcaggtcccctcgatacagcaaaagatcgt 650 Query: 181 taaactgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgat 240 | | || ||||||||||| |||||||| ||||| || || |||||||| || || ||||| Sbjct: 651 tcagctctgcaggcagctgaacaagccggtcatcgtcgcctcccagctcctcgagtcgat 710 Query: 241 gattgagtatcctatacccaccagggctgaagttgctgatgtttctgaagcagtccacca 300 ||| ||||| || | ||||||||||| || || || || || || ||||| |||| ||| Sbjct: 711 gatagagtaccccacgcccaccagggccgaggtcgcggacgtctccgaagccgtccgcca 770 Query: 301 acgtgcggatgctttaatgctttctggcgaatcggcaatgggcagatatccagataaggc 360 || || || || | |||||||| ||||| ||||||||||| || || || || ||||| Sbjct: 771 gcgcgccgacgccctgatgctttccggcgagtcggcaatggggaggtacccggacaaggc 830 Query: 361 gctcagtgtcctcagtaatgttagcttaaggattgaaagatggtggagggaggagaagc 419 ||||| || || || | || ||| | ||||| || | ||||||||||||||||||| Sbjct: 831 tctcagcgttctgaggagcgtcagcctgaggatcgagaagtggtggagggaggagaagc 889
>gb|M64737.1|RCCATPPPB Ricinus communis ATP:pyruvate phosphotransferase (PK-p-beta) mRNA, complete cds Length = 2022 Score = 149 bits (75), Expect = 1e-32 Identities = 237/291 (81%) Strand = Plus / Plus Query: 1 ctacatagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcat 60 |||||| || |||||| ||||| |||||||||||| || ||||| ||||| ||||| || Sbjct: 720 ctacattgctgcaaggtctcgtgacagtgatatagctgtcattgctaagatagagagtat 779 Query: 61 cgactctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccag 120 ||||| |||| ||||| || |||||||| || ||||| ||||| || |||||||| || Sbjct: 780 tgactcattgaagaacttagaagagatcattcgagcatcagatggagctatggtagcaag 839 Query: 121 aggggacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagt 180 ||| || |||| || || || || ||||| ||||| || ||| || ||||| || || Sbjct: 840 aggagatctgggtgctcagataccattggaacaggttccatcagcccagcaaaacattgt 899 Query: 181 taaactgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgat 240 | | | |||||||||||||| |||||||||||||||||||| ||| | |||||||| || Sbjct: 900 tcaggtctgcaggcagctaaataagccagtcattgttgcttctcagttacttgaatcaat 959 Query: 241 gattgagtatcctatacccaccagggctgaagttgctgatgtttctgaagc 291 |||||| || |||| ||||||||| || ||||| ||||||||||||||||| Sbjct: 960 gattgaataccctacacccaccagagcagaagtggctgatgtttctgaagc 1010
>gb|M64736.1|RCCATPPPA Ricinus communis ATP:pyruvate phosphotransferase (PK-p-alpha) mRNA, complete cds Length = 2115 Score = 149 bits (75), Expect = 1e-32 Identities = 237/291 (81%) Strand = Plus / Plus Query: 1 ctacatagcagcaaggagtcgtggcagtgatatagcggttattgcaaagatcgagagcat 60 |||||| || |||||| ||||| |||||||||||| || ||||| ||||| ||||| || Sbjct: 1062 ctacattgctgcaaggtctcgtgacagtgatatagctgtcattgctaagatagagagtat 1121 Query: 61 cgactctttgacaaacttggaggagatcatccgtgcatcggatggtgccatggtagccag 120 ||||| |||| ||||| || |||||||| || ||||| ||||| || |||||||| || Sbjct: 1122 tgactcattgaagaacttagaagagatcattcgagcatcagatggagctatggtagcaag 1181 Query: 121 aggggacttgggagcacaaattcccttggagcaggtcccttcaatacaacaaaagatagt 180 ||| || |||| || || || || ||||| ||||| || ||| || ||||| || || Sbjct: 1182 aggagatctgggtgctcagataccattggaacaggttccatcagcccagcaaaacattgt 1241 Query: 181 taaactgtgcaggcagctaaacaagccagtcattgttgcttcccagcttcttgaatcgat 240 | | | |||||||||||||| |||||||||||||||||||| ||| | |||||||| || Sbjct: 1242 tcaggtctgcaggcagctaaataagccagtcattgttgcttctcagttacttgaatcaat 1301 Query: 241 gattgagtatcctatacccaccagggctgaagttgctgatgtttctgaagc 291 |||||| || |||| ||||||||| || ||||| ||||||||||||||||| Sbjct: 1302 gattgaataccctacacccaccagagcagaagtggctgatgtttctgaagc 1352
>emb|Z28373.1|NTPKPAMR N.tabacum mRNA for pyruvate kinase (plastid isozyme) Length = 2234 Score = 99.6 bits (50), Expect = 9e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 41 attgcaaagatcgagagcatcgactctttgacaaacttggaggagatcatccgtgcatcg 100 |||||||| || |||||||| ||||| |||| ||||| || ||||| |||| ||||| Sbjct: 1073 attgcaaaaatagagagcattgactcattgaagaacttagaagagataatccaggcatca 1132 Query: 101 gatggtgccatggtagccagaggggacttgggagcacaaattcccttggagcaggtccct 160 |||||||| ||||| || ||||| || | || || |||||||| || || ||||| || Sbjct: 1133 gatggtgctatggtcgcgagaggagatcttggtgctcaaattccattagaacaggttcca 1192 Query: 161 tcaatacaacaaaagatagttaaactgtgcaggcagctaaacaagccagtcattgttgct 220 ||| || |||||||| ||| | | ||||||||||| || | ||| || || || || Sbjct: 1193 tcagagcagcaaaagattgttcagatatgcaggcagctgaataggcctgttatagtagcc 1252 Query: 221 tcccagcttcttgaatcgatgattgagtatcctatacccaccagggctgaagttgctgat 280 |||||||| || ||||| |||||||| || ||||| || || || ||||||||||||||| Sbjct: 1253 tcccagctgctggaatctatgattgaataccctattccaactagagctgaagttgctgat 1312 Query: 281 gtttctgaagcagtccaccaacgtgcggatgctttaatgctttctggcgaatcggcaatg 340 |||||||||||||| ||| | | ||||||||| ||||||||||| || ||||| ||| Sbjct: 1313 gtttctgaagcagttaggcaaaggggggatgctttgatgctttctggtgagtcggccatg 1372 Query: 341 gg 342 || Sbjct: 1373 gg 1374 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 473 tcagaagagatctgcatttctgctgctaaaatggctaacaagttggaagtagatgc 528 |||||||||||||||| ||||| || || ||||| ||||| |||||||| ||||| Sbjct: 1505 tcagaagagatctgcaactctgccgccaagatggcaaacaatttggaagttgatgc 1560
>ref|NM_113196.2| Arabidopsis thaliana pyruvate kinase AT3G22960 mRNA, complete cds Length = 2139 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 1581 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 1630
>gb|AY056196.1| Arabidopsis thaliana putative pyruvate kinase (At3g22960) mRNA, partial cds Length = 1190 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 633 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 682
>gb|AY058084.1| Arabidopsis thaliana AT3g22960/F5N5_15 mRNA, complete cds Length = 2124 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 1582 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 1631
>gb|AY056793.1| Arabidopsis thaliana AT3g22960/F5N5_15 mRNA, complete cds Length = 2096 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 1555 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 1604
>emb|BX826206.1|CNS0A7HY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 132 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 181
>gb|AY085149.1| Arabidopsis thaliana clone 13351 mRNA, complete sequence Length = 2118 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 1577 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 1626 Score = 46.1 bits (23), Expect = 0.12 Identities = 77/95 (81%) Strand = Plus / Plus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcctataccc 259 ||||| || |||||||| ||||| ||||| ||||| || ||||||||||| || | || Sbjct: 1313 aacaaacccgtcattgtcgcttctcagctacttgagtccatgattgagtacccaactcca 1372 Query: 260 accagggctgaagttgctgatgtttctgaagcagt 294 ||||| || ||||| || || || ||||||||||| Sbjct: 1373 accagagcagaagtagccgacgtgtctgaagcagt 1407 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 41 attgcaaagatcgagagcatcgactctttgacaaacttggaggagatcatccgtgcatcg 100 ||||||||||||||||| ||||| || ||||| || ||||| || || || | ||||| Sbjct: 1154 attgcaaagatcgagagtatcgattcattgaccaatttggaagaaattattctagcatca 1213 Query: 101 gatggtgccatggtagccagagg 123 ||||| |||||||| || ||||| Sbjct: 1214 gatggagccatggttgcaagagg 1236
>gb|BT002329.1| Arabidopsis thaliana clone C104993 putative pyruvate kinase (At3g22960) mRNA, complete cds Length = 1822 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatggctaacaa 513 |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 1447 gacaaaatctcagaagagatctgtaactcagctgctaaaatggctaacaa 1496
>ref|XM_469230.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1647 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 1006 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 1058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 26236427 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 26236375
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 65886 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 65834
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 26327736 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 26327684
>dbj|AK109881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C12, full insert sequence Length = 1806 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 1080 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 1132
>dbj|AK103388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127I24, full insert sequence Length = 1883 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 200 aacaagccagtcattgttgcttcccagcttcttgaatcgatgattgagtatcc 252 ||||||||||| || ||||| || |||||||||||||| ||| |||||||||| Sbjct: 1081 aacaagccagtgatagttgcctctcagcttcttgaatcaatggttgagtatcc 1133
>ref|NM_192472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1872 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 95 gcatcggatggtgccatggtagccagaggggacttgggagc 135 ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 1027 gcatcggatggggctatggttgccagaggtgacttgggagc 1067
>dbj|AK106457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-G01, full insert sequence Length = 1464 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 95 gcatcggatggtgccatggtagccagaggggacttgggagc 135 ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 618 gcatcggatggggctatggttgccagaggtgacttgggagc 658
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5 Length = 71327 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 464 gacaaaatatcagaagagatctgcatttctgctgctaaaatgg 506 |||||||| |||||||||||||| | || ||||||||||||| Sbjct: 53292 gacaaaatctcagaagagatctgtaactcagctgctaaaatgg 53334
>gb|AC058823.4| Homo sapiens BAC clone RP11-810D13 from 4, complete sequence Length = 144277 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 aatacaacaaaagatagttaaa 184 |||||||||||||||||||||| Sbjct: 86650 aatacaacaaaagatagttaaa 86671
>gb|AY115672.1| Brassica oleracea FLC5 (FLC5) gene, exons 2 through 7 and partial cds Length = 2017 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 419 caccatgagccactagaacttg 440 |||||||||||||||||||||| Sbjct: 493 caccatgagccactagaacttg 514
>gb|AC144643.3| Canis familiaris clone RP81-410C20, complete sequence Length = 115479 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 aaaatatcagaagagatctgcatttctgctgct 499 |||| ||||| ||||||||||||||||| |||| Sbjct: 110992 aaaacatcagcagagatctgcatttctgttgct 111024
>emb|CR391967.7| Zebrafish DNA sequence from clone CH211-107E6 in linkage group 25, complete sequence Length = 97560 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tcagtaatgttagcttaagga 392 ||||||||||||||||||||| Sbjct: 69363 tcagtaatgttagcttaagga 69343
>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence Length = 184358 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 ttgcttcccagcttcttgaat 236 ||||||||||||||||||||| Sbjct: 130943 ttgcttcccagcttcttgaat 130963
>gb|AC158999.2| Mus musculus BAC clone RP24-201N16 from chromosome 9, complete sequence Length = 169860 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 ttgcttcccagcttcttgaat 236 ||||||||||||||||||||| Sbjct: 159175 ttgcttcccagcttcttgaat 159155
>gb|AC136021.5| Mus musculus BAC clone RP24-473P10 from 9, complete sequence Length = 171139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 ttgcttcccagcttcttgaat 236 ||||||||||||||||||||| Sbjct: 152651 ttgcttcccagcttcttgaat 152631
>ref|NM_102503.2| Arabidopsis thaliana structural constituent of ribosome AT1G27400 mRNA, complete cds Length = 826 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 562 tcttctttctctgacaaaat 543
>gb|AC164984.2| Mus musculus BAC clone RP23-18I3 from chromosome 9, complete sequence Length = 214188 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 tggtggagggaggagaagca 420 |||||||||||||||||||| Sbjct: 125787 tggtggagggaggagaagca 125806
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gtcttctttctctgacaaaa 470 |||||||||||||||||||| Sbjct: 5053077 gtcttctttctctgacaaaa 5053096
>ref|XR_003417.1| PREDICTED: Mus musculus similar to translocated promoter region protein (LOC629960), mRNA Length = 4863 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tttctctgacaaaatatcagaaga 480 |||||||||||||||||| ||||| Sbjct: 4707 tttctctgacaaaatatctgaaga 4730
>ref|XM_907012.2| PREDICTED: Mus musculus similar to Stretchin-Mlck CG18255-PA, isoform A (LOC632784), mRNA Length = 12501 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tttctctgacaaaatatcagaaga 480 |||||||||||||||||| ||||| Sbjct: 4695 tttctctgacaaaatatctgaaga 4718
>ref|XM_985773.1| PREDICTED: Mus musculus hypothetical protein LOC666749 (LOC666749), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tttctctgacaaaatatcagaaga 480 |||||||||||||||||| ||||| Sbjct: 447 tttctctgacaaaatatctgaaga 470
>emb|CR388100.7| Zebrafish DNA sequence from clone DKEY-126H23 in linkage group 19, complete sequence Length = 138214 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 124192 gcagatatccagataaggcg 124211
>gb|AC117251.3| Mus musculus BAC clone RP24-372C12 from chromosome 8, complete sequence Length = 191927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 tgcatttctgctgctaaaat 504 |||||||||||||||||||| Sbjct: 77865 tgcatttctgctgctaaaat 77884
>emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 in linkage group 16, complete sequence Length = 168543 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 151765 gcagatatccagataaggcg 151746
>gb|AE004135.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 43 of 251 of the complete chromosome Length = 12614 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 gatgctttaatgctttctggcgaa 331 |||||| ||||||||||||||||| Sbjct: 894 gatgctgtaatgctttctggcgaa 871
>gb|AC146152.2| Pan troglodytes BAC clone RP43-23M20 from 7, complete sequence Length = 141539 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tggtggagggaggagaagca 420 |||||||||||||||||||| Sbjct: 82752 tggtggagggaggagaagca 82733
>emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 in linkage group 11, complete sequence Length = 184849 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 103312 gcagatatccagataaggcg 103293
>emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on chromosome 1 Contains the 5' end of a novel gene (FLJ20605) and a CpG island, complete sequence Length = 33915 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggacttgggagcacaaattc 143 |||||||||||||||||||| Sbjct: 23393 ggacttgggagcacaaattc 23374
>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3' end of the COL4A2 gene for collagen type IV alpha 2, the RAB20 gene for a RAS oncogene family member, a novel gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene (FLJ12118) and three CpG islands, complete sequence Length = 177392 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 attgttgcttcccagcttct 231 |||||||||||||||||||| Sbjct: 27979 attgttgcttcccagcttct 27960
>emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on chromosome 20 Contains a novel gene and the PA2G4P2 gene for proliferation-associated 2G4 pseudogene 2, complete sequence Length = 139030 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cttcaatacaacaaaagata 178 |||||||||||||||||||| Sbjct: 61958 cttcaatacaacaaaagata 61939
>emb|Y18218.1|PTR18218 Populus trichocarpa GLac3 gene Length = 3423 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caagccagtcattgttgctt 221 |||||||||||||||||||| Sbjct: 1511 caagccagtcattgttgctt 1492
>emb|Y13771.1|PTY13771 Populus trichocarpa mRNA for laccase, lac3 gene Length = 1946 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caagccagtcattgttgctt 221 |||||||||||||||||||| Sbjct: 575 caagccagtcattgttgctt 556
>emb|AL772266.6| Zebrafish DNA sequence from clone CH211-147H1 in linkage group 12 Contains a novel gene similar to mouse Grid2ip (ionotropic glutamate receptor delta 2 (Grid2) interacting protein 1), a novel gene similar to zebrafish pim1, a novel gene similar to vertebrate RGS9 (regulator of G-protein signalling 9) and two CpG islands, complete sequence Length = 179911 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 86837 gcagatatccagataaggcg 86818
>emb|CR388085.9| Zebrafish DNA sequence from clone CH211-232D10, complete sequence Length = 149672 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 105584 gcagatatccagataaggcg 105603
>emb|BX085193.16| Zebrafish DNA sequence from clone DKEY-20F20 in linkage group 2, complete sequence Length = 246911 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 130896 gcagatatccagataaggcg 130915
>gb|AC109441.3| Homo sapiens chromosome 5 clone CTC-269P20, complete sequence Length = 89908 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tgctgatgtttctgaagcag 293 |||||||||||||||||||| Sbjct: 84653 tgctgatgtttctgaagcag 84634
>emb|BX936384.22| Zebrafish DNA sequence from clone CH211-76M11 in linkage group 20 Contains seven novel genes and two CpG islands, complete sequence Length = 194634 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 167295 gcagatatccagataaggcg 167276
>emb|AL845351.6| Zebrafish DNA sequence from clone DKEYP-44A9 in linkage group 20, complete sequence Length = 160701 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 18560 gcagatatccagataaggcg 18579
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 215985 gcagatatccagataaggcg 215966
>gb|AC104441.2| Homo sapiens chromosome 3 clone RP11-901H12, complete sequence Length = 177320 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 aacaaaagatagttaaactgtgca 191 ||||||||||||||||| |||||| Sbjct: 135774 aacaaaagatagttaaaatgtgca 135797
>dbj|AK132251.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732426D01 product:hypothetical protein, full insert sequence Length = 2953 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tggtagccagaggggacttgggag 134 ||||||||||||||||| |||||| Sbjct: 34 tggtagccagaggggacctgggag 11
>gb|AY077651.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 531 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 467 tcttctttctctgacaaaat 448
>gb|AF428449.1|AF428449 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 712 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 502 tcttctttctctgacaaaat 483
>gb|AF428271.1|AF428271 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 762 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 502 tcttctttctctgacaaaat 483
>gb|AC008473.6| Homo sapiens chromosome 5 clone CTC-375J15, complete sequence Length = 98360 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tgctgatgtttctgaagcag 293 |||||||||||||||||||| Sbjct: 12221 tgctgatgtttctgaagcag 12240
>emb|BX511000.12| Zebrafish DNA sequence from clone DKEY-217F4 in linkage group 2, complete sequence Length = 191671 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 100652 gcagatatccagataaggcg 100633
>emb|BX248082.11| Zebrafish DNA sequence from clone CH211-237B12 in linkage group 16, complete sequence Length = 152455 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 123149 gcagatatccagataaggcg 123168
>gb|AY037249.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 767 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 502 tcttctttctctgacaaaat 483
>emb|BX537276.5| Zebrafish DNA sequence from clone DKEYP-57A10 in linkage group 3, complete sequence Length = 165427 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 109706 gcagatatccagataaggcg 109725
>emb|BX005284.12| Zebrafish DNA sequence from clone DKEY-23L19 in linkage group 14, complete sequence Length = 213404 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 212560 gcagatatccagataaggcg 212541
>emb|BX255936.11| Zebrafish DNA sequence from clone CH211-113K19 in linkage group 7, complete sequence Length = 93340 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 15309 gcagatatccagataaggcg 15328
>gb|AC127460.2| Homo sapiens chromosome 5 clone RP11-689B23, complete sequence Length = 115293 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tggtggagggaggagaagca 420 |||||||||||||||||||| Sbjct: 19787 tggtggagggaggagaagca 19768
>gb|AC011445.6|AC011445 Homo sapiens chromosome 19 clone CTC-246B18, complete sequence Length = 138538 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 gaaagatggtggagggagga 414 |||||||||||||||||||| Sbjct: 39119 gaaagatggtggagggagga 39100
>gb|AC074366.6| Homo sapiens BAC clone RP11-255N19 from 2, complete sequence Length = 111517 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 acaacaaaagatagttaaactgtg 189 |||| ||||||||||||||||||| Sbjct: 47937 acaagaaaagatagttaaactgtg 47960
>gb|AY088522.1| Arabidopsis thaliana clone 749 mRNA, complete sequence Length = 747 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 562 tcttctttctctgacaaaat 543
>emb|BX649481.10| Zebrafish DNA sequence from clone CH211-103D13 in linkage group 4, complete sequence Length = 192230 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 24999 gcagatatccagataaggcg 25018
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tcttctttctctgacaaaat 471 |||||||||||||||||||| Sbjct: 60448 tcttctttctctgacaaaat 60429
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gtcttctttctctgacaaaa 470 |||||||||||||||||||| Sbjct: 1615311 gtcttctttctctgacaaaa 1615292
>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14, complete sequence Length = 238499 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 118353 gcagatatccagataaggcg 118372
>emb|BX004785.9| Zebrafish DNA sequence from clone CH211-12P12 in linkage group 18, complete sequence Length = 170077 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 38665 gcagatatccagataaggcg 38646
>emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 in linkage group 20, complete sequence Length = 182152 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 135303 gcagatatccagataaggcg 135284
>emb|BX324128.14| Zebrafish DNA sequence from clone DKEY-181O6 in linkage group 19, complete sequence Length = 139695 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 67770 gcagatatccagataaggcg 67789
>emb|BX005049.6| Zebrafish DNA sequence from clone DKEY-89O18 in linkage group 24, complete sequence Length = 251421 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 agatctgcatttctgctgct 499 |||||||||||||||||||| Sbjct: 70863 agatctgcatttctgctgct 70882
>emb|BX296533.9| Zebrafish DNA sequence from clone DKEY-54O1 in linkage group 5, complete sequence Length = 200047 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 agatctgcatttctgctgct 499 |||||||||||||||||||| Sbjct: 9930 agatctgcatttctgctgct 9949
>emb|CR383671.20| Zebrafish DNA sequence from clone CH211-127B6 in linkage group 15, complete sequence Length = 132412 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 98988 gcagatatccagataaggcg 99007
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gcaatgggcagatatccaga 354 |||||||||||||||||||| Sbjct: 160314 gcaatgggcagatatccaga 160295
>emb|AL954746.8| Zebrafish DNA sequence from clone DKEY-10P5, complete sequence Length = 231840 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 120082 gcagatatccagataaggcg 120063
>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence Length = 180029 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 gcagatatccagataaggcg 361 |||||||||||||||||||| Sbjct: 60944 gcagatatccagataaggcg 60925
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tttctctgacaaaatatcagaaga 480 |||||||||||||||||| ||||| Sbjct: 115264 tttctctgacaaaatatctgaaga 115287
>emb|AL732426.6| Mouse DNA sequence from clone RP23-132J17 on chromosome X, complete sequence Length = 140199 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tggtagccagaggggacttgggag 134 ||||||||||||||||| |||||| Sbjct: 41019 tggtagccagaggggacctgggag 40996
>emb|AL669905.14| Mouse DNA sequence from clone RP23-110H24 on chromosome 4, complete sequence Length = 138217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 catggtagccagaggggact 128 |||||||||||||||||||| Sbjct: 98372 catggtagccagaggggact 98353 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,014,720 Number of Sequences: 3902068 Number of extensions: 5014720 Number of successful extensions: 95908 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95607 Number of HSP's gapped (non-prelim): 300 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)