ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF479056.1| Triticum aestivum ste20-related protein mRNA, par... 644 0.0
2dbj|AK100288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 6e-93
3ref|NM_197379.1| Oryza sativa (japonica cultivar-group) putative... 252 1e-63
4dbj|AK121970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
5gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 geno... 167 5e-38
6gb|AC092696.5| Oryza sativa chromosome 10 BAC OSJNBa0056G08 geno... 167 5e-38
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 167 5e-38
9ref|NM_187542.1| Oryza sativa (japonica cultivar-group), predic... 139 1e-29
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 9e-15
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
12gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 90 9e-15
13emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-7... 48 0.029
14dbj|AK121729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
15gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, comp... 44 0.45
16gb|AC146210.2| Pan troglodytes BAC clone RP43-25O2 from 7, compl... 44 0.45
17gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Ca... 44 0.45
18gb|AC009245.11| Homo sapiens chromosome 7 clone RP11-351B12, com... 44 0.45
19gb|AC009179.17|AC009179 Homo sapiens chromosome 7 clone RP11-228... 44 0.45
20gb|AY714387.1| Carassius carassius mitochondrion, complete genome 42 1.8
21gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's H... 42 1.8
22gb|AC091395.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.8
23gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's ... 42 1.8
24emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in l... 42 1.8
25gb|AY694420.1| Carassius auratus x Cyprinus carpio mitochondrion... 42 1.8
26gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's ... 42 1.8
27dbj|AB111951.1| Carassius auratus auratus mitochondrial DNA, com... 42 1.8
28dbj|AP004521.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.8
29gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, comp... 40 7.1
30gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 7.1
31gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
32gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, com... 40 7.1
33ref|XM_660977.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.1
34gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 7.1
35emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on ch... 40 7.1
36emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chr... 40 7.1
37emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on ch... 40 7.1
38emb|AJ298298.1|BP2298298 Bacteriophage P27 complete genome 40 7.1
39gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 40 7.1
40gb|AC117401.3| Homo sapiens 3 BAC RP11-521J5 (Roswell Park Cance... 40 7.1
41gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 40 7.1
42ref|XM_701864.1| PREDICTED: Danio rerio similar to Spectrin beta... 40 7.1
43ref|XM_701863.1| PREDICTED: Danio rerio similar to Spectrin beta... 40 7.1
44ref|XM_678179.1| PREDICTED: Danio rerio similar to Spectrin beta... 40 7.1
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
47gb|AC073120.5| Homo sapiens BAC clone RP11-612D17 from 2, comple... 40 7.1
48dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 7.1
49gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complet... 40 7.1
50dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
51emb|CT025939.7| Zebrafish DNA sequence from clone DKEY-99P10 in ... 40 7.1
52gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence 40 7.1
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
54emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10,... 40 7.1 
>gb|AF479056.1| Triticum aestivum ste20-related protein mRNA, partial cds
          Length = 687

 Score =  644 bits (325), Expect = 0.0
 Identities = 368/381 (96%), Gaps = 1/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
           ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aagagaccgacggctgag-aagttgctcaagcattcatttttcaaaactgcaaaacctcc 353

                                                                       
Query: 62  agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
           ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 354 agaatcgacaatgaagggtatgttaactgatctgcctcctctatgggagcgtgtaaaggc 413

                                                                       
Query: 122 actccagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcagga 181
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 414 actccagcttaaagacgcagcacaattggctttgaagaaaatgccttcttctgagcagga 473

                                                                       
Query: 182 ggcactttccctgagtgaataccagcgaggtgttagtgcgtggcactttgatattgaaga 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggcactttccctgagtgaataccagcgaggtgttagtgcgtggcactttgatattgaaga 533

                                                                       
Query: 242 cctcaaggctcaagcatcactaatttatgaagatgaaccatctgaaatgaaagaagatga 301
           |||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||
Sbjct: 534 cctcaaggctcaagcatcactaatttatgaggatgaaccatctgaaacaaaagaggatga 593

                                                                       
Query: 302 tgttgctgcaagaatcactgaatctgaaaagagtttatattcgaggaacccttcaggaca 361
           ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 594 tgtcgctgcaagaatcattgaatctgaaaagagtttatattcgaggaccccttcaggaca 653

                                
Query: 362 gtcgccatctgcaaatgaaaa 382
           |||| ||||||||||||||||
Sbjct: 654 gtcgtcatctgcaaatgaaaa 674
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>dbj|AK100288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075H06, full
            insert sequence
          Length = 2982

 Score =  349 bits (176), Expect = 6e-93
 Identities = 278/312 (89%)
 Strand = Plus / Plus

                                                                        
Query: 21   aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
            |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 1074 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 1133

                                                                        
Query: 81   atcttaactgatctacctcctctatgggagcgtgtaaaggcactccagcttaaagacgca 140
            |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |  
Sbjct: 1134 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccagcttaaagatgag 1193

                                                                        
Query: 141  gcacaattggctttgaagaagatgccttcttctgagcaggaggcactttccctgagtgaa 200
            ||||| ||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct: 1194 gcacagttggccttgaagaaaatgccttcttctgagcaggaggcactctccatgagtgaa 1253

                                                                        
Query: 201  taccagcgaggtgttagtgcgtggcactttgatattgaagacctcaaggctcaagcatca 260
            ||||| |||||||||||||| ||| |||| ||| ||||||| |||||||| |||||||||
Sbjct: 1254 taccaacgaggtgttagtgcatggaacttcgatgttgaagatctcaaggcccaagcatca 1313

                                                                        
Query: 261  ctaatttatgaagatgaaccatctgaaatgaaagaagatgatgttgctgcaagaatcact 320
            ||||||  ||| ||||||||  ||||||| |||||||| |||| | ||||||||| || |
Sbjct: 1314 ctaattcgtgatgatgaaccccctgaaataaaagaagacgatgatactgcaagaaccatt 1373

                        
Query: 321  gaatctgaaaag 332
            |||  |||||||
Sbjct: 1374 gaagttgaaaag 1385



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                        
Query: 429  atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
            |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 1542 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 1601

                                        
Query: 489  gaa---ccagagtcaaaatattggagaa 513
             ||   ||||||||||||||||||||||
Sbjct: 1602 caagatccagagtcaaaatattggagaa 1629
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>ref|NM_197379.1| Oryza sativa (japonica cultivar-group) putative Ste20-related
           protein kinase (OSJNBb0018B10.1), mRNA
          Length = 1932

 Score =  252 bits (127), Expect = 1e-63
 Identities = 157/167 (94%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
           |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 613 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 672

                                                                       
Query: 81  atcttaactgatctacctcctctatgggagcgtgtaaaggcactccagcttaaagacgca 140
           |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 673 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccagcttaaagatgca 732

                                                          
Query: 141 gcacaattggctttgaagaagatgccttcttctgagcaggaggcact 187
           ||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 733 gcacagttggccttgaagaaaatgccttcttctgagcaggaggcact 779



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                        
Query: 429  atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
            |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 1012 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 1071

                                        
Query: 489  gaa---ccagagtcaaaatattggagaa 513
             ||   ||||||||||||||||||||||
Sbjct: 1072 caagatccagagtcaaaatattggagaa 1099
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>dbj|AK121970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108H17, full
            insert sequence
          Length = 2902

 Score =  174 bits (88), Expect = 2e-40
 Identities = 247/299 (82%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
            |||||||| ||||||||  ||||| || ||||| ||||||||||| |  |||||||||||
Sbjct: 982  aagaggccaacggctga-aaagttactaaagcactcatttttcaagaacgcaaaacctcc 1040

                                                                        
Query: 62   agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
            |||   |||  | ||| |||| ||||||||| | || ||||| ||||| |||||||| ||
Sbjct: 1041 agagctgactgttaagagtattttaactgatttgccccctctgtgggatcgtgtaaaagc 1100

                                                                        
Query: 122  actccagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcagga 181
             |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 1101 gctccagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacagga 1160

                                                                        
Query: 182  ggcactttccctgagtgaataccagcgaggtgttagtgcgtggcactttgatattgaaga 241
            |||||||||  ||||||| |||||  |||| || || || ||| |||| |||||||| ||
Sbjct: 1161 ggcactttctatgagtgagtaccaaagaggcgtaagcgcatggaacttcgatattgagga 1220

                                                                       
Query: 242  cctcaaggctcaagcatcactaatttatgaagatgaaccatctgaaatgaaagaagatg 300
              | ||||||||||||||| | ||| |||| ||||| ||| ||||||| || |||||||
Sbjct: 1221 tttaaaggctcaagcatcattgattcatgatgatgatccacctgaaataaaggaagatg 1279
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>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence,
            complete sequence
          Length = 135789

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                        
Query: 21   aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
            |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 2530 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 2589

                                                            
Query: 81   atcttaactgatctacctcctctatgggagcgtgtaaaggcactccag 128
            |||||||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 2590 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccag 2637



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                        
Query: 126  cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
            ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 2718 cagcttaaagatgcagcacagttggccttgaagaaaatgccttcttctgagcaggaggca 2777

              
Query: 186  ct 187
            ||
Sbjct: 2778 ct 2779



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                        
Query: 194  gagtgaataccagcgaggtgttagtgcgtggcactttgatattgaagacctcaaggctca 253
            |||||||||||| |||||||||||||| ||| |||| ||| ||||||| |||||||| ||
Sbjct: 3599 gagtgaataccaacgaggtgttagtgcatggaacttcgatgttgaagatctcaaggccca 3658

                      
Query: 254  agcatcacta 263
            ||||||||||
Sbjct: 3659 agcatcacta 3668



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                        
Query: 429  atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
            |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 4766 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 4825

                                        
Query: 489  gaa---ccagagtcaaaatattggagaa 513
             ||   ||||||||||||||||||||||
Sbjct: 4826 caagatccagagtcaaaatattggagaa 4853
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>gb|AC092696.5| Oryza sativa chromosome 10 BAC OSJNBa0056G08 genomic sequence,
            complete sequence
          Length = 12717

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                        
Query: 21   aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
            |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 9491 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 9550

                                                            
Query: 81   atcttaactgatctacctcctctatgggagcgtgtaaaggcactccag 128
            |||||||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 9551 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccag 9598



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                        
Query: 126  cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
            ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 9679 cagcttaaagatgcagcacagttggccttgaagaaaatgccttcttctgagcaggaggca 9738

              
Query: 186  ct 187
            ||
Sbjct: 9739 ct 9740



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 194   gagtgaataccagcgaggtgttagtgcgtggcactttgatattgaagacctcaaggctca 253
             |||||||||||| |||||||||||||| ||| |||| ||| ||||||| |||||||| ||
Sbjct: 10560 gagtgaataccaacgaggtgttagtgcatggaacttcgatgttgaagatctcaaggccca 10619

                       
Query: 254   agcatcacta 263
             ||||||||||
Sbjct: 10620 agcatcacta 10629



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                         
Query: 429   atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
             |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 11727 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 11786

                                         
Query: 489   gaa---ccagagtcaaaatattggagaa 513
              ||   ||||||||||||||||||||||
Sbjct: 11787 caagatccagagtcaaaatattggagaa 11814
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                            
Query: 21       aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
                |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 19545339 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 19545398

                                                                
Query: 81       atcttaactgatctacctcctctatgggagcgtgtaaaggcactccag 128
                |||||||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 19545399 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccag 19545446



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                            
Query: 126      cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
                ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 19545527 cagcttaaagatgcagcacagttggccttgaagaaaatgccttcttctgagcaggaggca 19545586

                  
Query: 186      ct 187
                ||
Sbjct: 19545587 ct 19545588



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 194      gagtgaataccagcgaggtgttagtgcgtggcactttgatattgaagacctcaaggctca 253
                |||||||||||| |||||||||||||| ||| |||| ||| ||||||| |||||||| ||
Sbjct: 19546408 gagtgaataccaacgaggtgttagtgcatggaacttcgatgttgaagatctcaaggccca 19546467

                          
Query: 254      agcatcacta 263
                ||||||||||
Sbjct: 19546468 agcatcacta 19546477



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                            
Query: 429      atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
                |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 19547575 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 19547634

                                            
Query: 489      gaa---ccagagtcaaaatattggagaa 513
                 ||   ||||||||||||||||||||||
Sbjct: 19547635 caagatccagagtcaaaatattggagaa 19547662
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                            
Query: 21       aagttgctcaagcattcatttttcaaaactgcaaaacctccagaatcgacaatgaagggt 80
                |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 19556615 aagttgctaaagcattcatttttcaaaaatgcaaaacctccagaattgacaatgaagggt 19556674

                                                                
Query: 81       atcttaactgatctacctcctctatgggagcgtgtaaaggcactccag 128
                |||||||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 19556675 atcttaactgatttacctcctctatgggaccgtgtaaaggctctccag 19556722



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                            
Query: 126      cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
                ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 19556803 cagcttaaagatgcagcacagttggccttgaagaaaatgccttcttctgagcaggaggca 19556862

                  
Query: 186      ct 187
                ||
Sbjct: 19556863 ct 19556864



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 194      gagtgaataccagcgaggtgttagtgcgtggcactttgatattgaagacctcaaggctca 253
                |||||||||||| |||||||||||||| ||| |||| ||| ||||||| |||||||| ||
Sbjct: 19557684 gagtgaataccaacgaggtgttagtgcatggaacttcgatgttgaagatctcaaggccca 19557743

                          
Query: 254      agcatcacta 263
                ||||||||||
Sbjct: 19557744 agcatcacta 19557753



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 74/88 (84%), Gaps = 3/88 (3%)
 Strand = Plus / Plus

                                                                            
Query: 429      atgcccaatggacatgcaaattctagatcagagaatgattcattgccctctacatcaaag 488
                |||||||||||  ||| |||  ||||||||||||||   ||||  |||||||||||||||
Sbjct: 19558851 atgcccaatgggtatgaaaacgctagatcagagaatagctcatcaccctctacatcaaag 19558910

                                            
Query: 489      gaa---ccagagtcaaaatattggagaa 513
                 ||   ||||||||||||||||||||||
Sbjct: 19558911 caagatccagagtcaaaatattggagaa 19558938
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>ref|NM_187542.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1938

 Score =  139 bits (70), Expect = 1e-29
 Identities = 160/189 (84%), Gaps = 1/189 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
            |||||||| ||||||||  ||||| || ||||| ||||||||||| |  |||||||||||
Sbjct: 871  aagaggccaacggctga-aaagttactaaagcactcatttttcaagaacgcaaaacctcc 929

                                                                        
Query: 62   agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
            |||   |||  | ||| |||| ||||||||| | || ||||| ||||| |||||||| ||
Sbjct: 930  agagctgactgttaagagtattttaactgatttgccccctctgtgggatcgtgtaaaagc 989

                                                                        
Query: 122  actccagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcagga 181
             |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 990  gctccagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacagga 1049

                     
Query: 182  ggcactttc 190
            |||||||||
Sbjct: 1050 ggcactttc 1058
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                          
Query: 126    cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
              ||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 781532 cagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggca 781591

                   
Query: 186    ctttc 190
              |||||
Sbjct: 781592 ctttc 781596



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/127 (81%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
              |||||||| ||||||||  ||||| || ||||| ||||||||||| |  |||||||||||
Sbjct: 781322 aagaggccaacggctga-aaagttactaaagcactcatttttcaagaacgcaaaacctcc 781380

                                                                          
Query: 62     agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
              |||   |||  | ||| |||| ||||||||| | || ||||| ||||| |||||||| ||
Sbjct: 781381 agagctgactgttaagagtattttaactgatttgccccctctgtgggatcgtgtaaaagc 781440

                     
Query: 122    actccag 128
               ||||||
Sbjct: 781441 gctccag 781447



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      acctcaaggctcaagcatca 260
                ||||||||||||||||||||
Sbjct: 31149607 acctcaaggctcaagcatca 31149626
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                          
Query: 126    cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
              ||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 781530 cagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggca 781589

                   
Query: 186    ctttc 190
              |||||
Sbjct: 781590 ctttc 781594



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/127 (81%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
              |||||||| ||||||||  ||||| || ||||| ||||||||||| |  |||||||||||
Sbjct: 781320 aagaggccaacggctga-aaagttactaaagcactcatttttcaagaacgcaaaacctcc 781378

                                                                          
Query: 62     agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
              |||   |||  | ||| |||| ||||||||| | || ||||| ||||| |||||||| ||
Sbjct: 781379 agagctgactgttaagagtattttaactgatttgccccctctgtgggatcgtgtaaaagc 781438

                     
Query: 122    actccag 128
               ||||||
Sbjct: 781439 gctccag 781445



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      acctcaaggctcaagcatca 260
                ||||||||||||||||||||
Sbjct: 31240130 acctcaaggctcaagcatca 31240149
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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 126   cagcttaaagacgcagcacaattggctttgaagaagatgccttcttctgagcaggaggca 185
             ||||| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 77077 cagctaaaagatgcagcacaattagctttgaagaaaatgccttcttctgaacaggaggca 77136

                  
Query: 186   ctttc 190
             |||||
Sbjct: 77137 ctttc 77141



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/127 (81%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     aagaggccgacggctgagnaagttgctcaagcattcatttttcaaaactgcaaaacctcc 61
             |||||||| ||||||||  ||||| || ||||| ||||||||||| |  |||||||||||
Sbjct: 76867 aagaggccaacggctga-aaagttactaaagcactcatttttcaagaacgcaaaacctcc 76925

                                                                         
Query: 62    agaatcgacaatgaagggtatcttaactgatctacctcctctatgggagcgtgtaaaggc 121
             |||   |||  | ||| |||| ||||||||| | || ||||| ||||| |||||||| ||
Sbjct: 76926 agagctgactgttaagagtattttaactgatttgccccctctgtgggatcgtgtaaaagc 76985

                    
Query: 122   actccag 128
              ||||||
Sbjct: 76986 gctccag 76992
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>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184656

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 132    aaagacgcagcacaattggctttgaaga 159
              ||||| ||||||||||||||||||||||
Sbjct: 102501 aaagatgcagcacaattggctttgaaga 102474
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>dbj|AK121729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D12, full
           insert sequence
          Length = 2055

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 246 aaggctcaagcatcactaatttatgaagatgaaccatctgaaatgaaagaagatg 300
           ||||||||||||||| | ||| |||| ||||| ||| ||||||| || |||||||
Sbjct: 400 aaggctcaagcatcattgattcatgatgatgatccacctgaaataaaggaagatg 454
to top
>gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, complete sequence
          Length = 209731

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 468   tcattgccctctacatcaaagg 489
             ||||||||||||||||||||||
Sbjct: 44025 tcattgccctctacatcaaagg 44046
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>gb|AC146210.2| Pan troglodytes BAC clone RP43-25O2 from 7, complete sequence
          Length = 137116

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 468   tcattgccctctacatcaaagg 489
             ||||||||||||||||||||||
Sbjct: 28424 tcattgccctctacatcaaagg 28403
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>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 212172

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 376    atgaaaacgcctgcagtgaaga 397
              ||||||||||||||||||||||
Sbjct: 146608 atgaaaacgcctgcagtgaaga 146587
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>gb|AC009245.11| Homo sapiens chromosome 7 clone RP11-351B12, complete sequence
          Length = 197659

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 468   tcattgccctctacatcaaagg 489
             ||||||||||||||||||||||
Sbjct: 44368 tcattgccctctacatcaaagg 44389
to top
>gb|AC009179.17|AC009179 Homo sapiens chromosome 7 clone RP11-228I4, complete sequence
          Length = 179405

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 468   tcattgccctctacatcaaagg 489
             ||||||||||||||||||||||
Sbjct: 28494 tcattgccctctacatcaaagg 28473
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>gb|AY714387.1| Carassius carassius mitochondrion, complete genome
          Length = 16580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 502   aatattggagaactaatattg 522
             |||||||||||||||||||||
Sbjct: 11832 aatattggagaactaatattg 11812
to top
>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 213379

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    aagttgctcaagcattcatttttca 45
             ||||||||||| |||||||||||||
Sbjct: 21041 aagttgctcaatcattcatttttca 21017
to top
>gb|AC091395.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-288L22, complete
            sequence
          Length = 163323

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 27   ctcaagcattcatttttcaaa 47
            |||||||||||||||||||||
Sbjct: 7821 ctcaagcattcatttttcaaa 7801
to top
>gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 191583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    aagttgctcaagcattcatttttca 45
             ||||||||||| |||||||||||||
Sbjct: 81908 aagttgctcaatcattcatttttca 81932
to top
>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23, complete
              sequence
          Length = 127420

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    aagatgaaccatctgaaatga 291
              |||||||||||||||||||||
Sbjct: 113338 aagatgaaccatctgaaatga 113318
to top
>gb|AY694420.1| Carassius auratus x Cyprinus carpio mitochondrion, complete genome
          Length = 16580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 502   aatattggagaactaatattg 522
             |||||||||||||||||||||
Sbjct: 11832 aatattggagaactaatattg 11812
to top
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    aagacctcaaggctcaagcat 258
              |||||||||||||||||||||
Sbjct: 145541 aagacctcaaggctcaagcat 145561
to top
>dbj|AB111951.1| Carassius auratus auratus mitochondrial DNA, complete genome
          Length = 16580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 502   aatattggagaactaatattg 522
             |||||||||||||||||||||
Sbjct: 11832 aatattggagaactaatattg 11812
to top
>dbj|AP004521.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17K09, TM0049a,
             complete sequence
          Length = 92504

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   ttgaagacctcaaggctcaag 255
             |||||||||||||||||||||
Sbjct: 44682 ttgaagacctcaaggctcaag 44662
to top
>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence
          Length = 239600

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     attcatttttcaaaactgcaaaac 57
              ||||||||||||||||| ||||||
Sbjct: 131647 attcatttttcaaaacttcaaaac 131624
to top
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     cacaattggctttgaagaag 161
               ||||||||||||||||||||
Sbjct: 2293292 cacaattggctttgaagaag 2293273
to top
>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0069E11, complete sequence
          Length = 136959

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gacctcaaggctcaagcatc 259
             ||||||||||||||||||||
Sbjct: 59123 gacctcaaggctcaagcatc 59142
to top
>gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, complete sequence
          Length = 231678

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    attgaagacctcaaggctca 253
              ||||||||||||||||||||
Sbjct: 161202 attgaagacctcaaggctca 161183
to top
>ref|XM_660977.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30165)
           partial mRNA
          Length = 618

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 275 tgaaccatctgaaatgaaagaagatgat 302
           |||||| ||||||| |||||||||||||
Sbjct: 384 tgaaccctctgaaaagaaagaagatgat 411
to top
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    aatattggagaactaatatt 521
              ||||||||||||||||||||
Sbjct: 280980 aatattggagaactaatatt 280999
to top
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the
             5' end of the CBARA1 gene for calcium binding
             atopy-related autoantigen 1, an HMG17 pseudogene, a
             cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a
             novel gene, a novel pseudogene (FLJ12684) and a CpG
             island, complete sequence
          Length = 163632

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   tgaagatgaaccatctgaaa 288
             ||||||||||||||||||||
Sbjct: 63462 tgaagatgaaccatctgaaa 63481
to top
>emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chromosome 1 Contains two
             novel genes, the PFKFB2 gene for
             6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 2, the
             C4BPB gene for complement component 4 binding protein
             beta, the C4BPA gene for complement component 4 binding
             protein alpha, a novel pseudogene and a complement
             component 4 binding protein pseudogene, complete sequence
          Length = 158939

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tcatttttcaaaactgcaaa 55
             ||||||||||||||||||||
Sbjct: 71692 tcatttttcaaaactgcaaa 71711
to top
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a
              novel gene (FLJ13657), the PLAA gene for phospholipase
              A2-activating protein (PLAP), a novel gene, the 5' end of
              capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1)
              and 3 CpG islands, complete sequence
          Length = 187805

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    aagaatcactgaatctgaaaagag 334
              ||||||||||||| ||||||||||
Sbjct: 183916 aagaatcactgaaactgaaaagag 183893
to top
>emb|AJ298298.1|BP2298298 Bacteriophage P27 complete genome
          Length = 42575

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   gaaatgaaagaagatgatgt 304
             ||||||||||||||||||||
Sbjct: 25692 gaaatgaaagaagatgatgt 25711
to top
>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete
              Sequence, complete sequence
          Length = 256933

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 139    cagcacaattggctttgaagaaga 162
              ||||||||||| ||||||||||||
Sbjct: 131038 cagcacaattgtctttgaagaaga 131015
to top
>gb|AC117401.3| Homo sapiens 3 BAC RP11-521J5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ttctgagcaggaggcacttt 189
              ||||||||||||||||||||
Sbjct: 115256 ttctgagcaggaggcacttt 115275
to top
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   acctcaaggctcaagcatca 260
             ||||||||||||||||||||
Sbjct: 70248 acctcaaggctcaagcatca 70267
to top
>ref|XM_701864.1| PREDICTED: Danio rerio similar to Spectrin beta chain, brain 2
           (Spectrin, non-erythroid beta chain 2) (Beta-III
           spectrin) (SPNB-3) (Beta SpIII sigma 1) (Spectrin-like
           protein GTRAP41), transcript variant 3 (LOC558044), mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  aaactgcaaaacctccagaa 65
           ||||||||||||||||||||
Sbjct: 867 aaactgcaaaacctccagaa 848
to top
>ref|XM_701863.1| PREDICTED: Danio rerio similar to Spectrin beta chain, brain 2
           (Spectrin, non-erythroid beta chain 2) (Beta-III
           spectrin) (SPNB-3) (Beta SpIII sigma 1) (Spectrin-like
           protein GTRAP41), transcript variant 2 (LOC558044), mRNA
          Length = 1851

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  aaactgcaaaacctccagaa 65
           ||||||||||||||||||||
Sbjct: 867 aaactgcaaaacctccagaa 848
to top
>ref|XM_678179.1| PREDICTED: Danio rerio similar to Spectrin beta chain, brain 2
           (Spectrin, non-erythroid beta chain 2) (Beta-III
           spectrin) (SPNB-3) (Beta SpIII sigma 1) (Spectrin-like
           protein GTRAP41), transcript variant 1 (LOC558044), mRNA
          Length = 1899

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  aaactgcaaaacctccagaa 65
           ||||||||||||||||||||
Sbjct: 867 aaactgcaaaacctccagaa 848
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gacctcaaggctcaagcatc 259
               ||||||||||||||||||||
Sbjct: 8380197 gacctcaaggctcaagcatc 8380216
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 437     tggacatgcaaattctagat 456
               ||||||||||||||||||||
Sbjct: 3241573 tggacatgcaaattctagat 3241554
to top
>gb|AC073120.5| Homo sapiens BAC clone RP11-612D17 from 2, complete sequence
          Length = 43877

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 420   tgtagaaggatgcccaatggacat 443
             ||||||| ||||||||||||||||
Sbjct: 15914 tgtagaatgatgcccaatggacat 15891
to top
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     gcaagaatcactgaatctga 328
               ||||||||||||||||||||
Sbjct: 2232881 gcaagaatcactgaatctga 2232862
to top
>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence
          Length = 193015

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   catctgaaatgaaagaagat 299
             ||||||||||||||||||||
Sbjct: 29925 catctgaaatgaaagaagat 29944
to top
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1103G11
          Length = 182931

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    tggacatgcaaattctagat 456
              ||||||||||||||||||||
Sbjct: 113760 tggacatgcaaattctagat 113741
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>emb|CT025939.7| Zebrafish DNA sequence from clone DKEY-99P10 in linkage group 5,
             complete sequence
          Length = 56634

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    aaactgcaaaacctccagaa 65
             ||||||||||||||||||||
Sbjct: 35417 aaactgcaaaacctccagaa 35436
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>gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence
          Length = 42810

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  aagaagatgatgttgctgcaagaa 315
            ||||||| ||||||||||||||||
Sbjct: 4015 aagaagaagatgttgctgcaagaa 4038
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gacctcaaggctcaagcatc 259
               ||||||||||||||||||||
Sbjct: 8450960 gacctcaaggctcaagcatc 8450979
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>emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10, complete sequence
          Length = 188491

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    aagaatcactgaatctgaaaagag 334
              ||||||||||||| ||||||||||
Sbjct: 157008 aagaatcactgaaactgaaaagag 157031


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,447,526
Number of Sequences: 3902068
Number of extensions: 5447526
Number of successful extensions: 120968
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120511
Number of HSP's gapped (non-prelim): 448
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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