ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20i18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 438 bits (221), Expect = e-120 Identities = 431/501 (86%) Strand = Plus / Plus Query: 6 tatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgagagg 65 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 433 tatgagggcaatgttgaggccactggtgaggatttctctgttgagccagctgatgagagg 492 Query: 66 aggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgtgtg 125 |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 493 aggcctttccgtgctctcttggatgttggccttattaggactacaactgggaaccgtgtc 552 Query: 126 tttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaagaga 185 |||||||| || |||||||||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 553 tttggtgccctcaagggagctttggatggtggcctggatattcctcacagcgagaagagg 612 Query: 186 tttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtacatc 245 |||||||||||||||||||| || ||| ||||||||||| || || |||||||||||| Sbjct: 613 tttgctggtttcaagaaggatgacaagcagctggatgctgatatccatcgcaagtacatc 672 Query: 246 tatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaagtac 305 ||||| || ||||||||||||||||||||| || || || ||||| || ||||||||| Sbjct: 673 tatggtggccatgttgctgactacatgaggaacctcgctgaagaggagccagagaagtac 732 Query: 306 caaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagcagtt 365 || ||||||||||||||||||| ||||||||||| ||||||||||||||||| | Sbjct: 733 cagtctcacttcagtgagtacattaagaagggaattgaggctgatgacatggaagctctg 792 Query: 366 tacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaagcca 425 ||||||||||| || ||||||||||| ||||||||| ||| | ||| |||||||||| Sbjct: 793 tacaagaaggtccatgctgccatccgtgctgatccttccattgtcaagtcaaccaagcag 852 Query: 426 gctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaaggcc 485 | || ||| || ||||||||||||||||||||||| || || ||| ||||||||||| Sbjct: 853 ccaccaaaggagcataagaggtacaaccccaagaagctgacatatgagcagaggaaggcc 912 Query: 486 agcctcgtcgagaggctcaac 506 |||||| | || ||||||||| Sbjct: 913 agcctcattgaaaggctcaac 933
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 430 bits (217), Expect = e-117 Identities = 430/501 (85%) Strand = Plus / Plus Query: 6 tatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgagagg 65 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 417 tatgagggcaatgttgaggccactggtgaggacttctctgttgagccagctgatgagagg 476 Query: 66 aggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgtgtg 125 |||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 477 aggcctttccgtgctctcttggatgttggccttattaggactacaactgggaaccgtgtc 536 Query: 126 tttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaagaga 185 |||||||| || |||||||||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 537 tttggtgccctcaagggagctttggatggtggcctggatattcctcacagcgagaagagg 596 Query: 186 tttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtacatc 245 |||||||||||||||||||| || ||| ||||||||||| || || |||||||||||| Sbjct: 597 tttgctggtttcaagaaggatgacaagcagctggatgctgatatccatcgcaagtacatc 656 Query: 246 tatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaagtac 305 ||||| || ||||||||||||||||||||| || || || ||||| || ||||||||| Sbjct: 657 tatggtggccatgttgctgactacatgaggaacctcgctgaagaggagccagagaagtac 716 Query: 306 caaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagcagtt 365 || ||||||||||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 717 cagtctcacttcagtgagtacattaagaagggaattgaggctgacgacatggaagctctg 776 Query: 366 tacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaagcca 425 ||||||||||| || ||||||||||| ||||||||| ||| ||| |||||||||| Sbjct: 777 tacaagaaggtccatgctgccatccgtgctgatccttctgtggtcaagtcaaccaagcag 836 Query: 426 gctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaaggcc 485 | || ||| ||||||||||||||||||||||| || || |||||| ||||||||||| Sbjct: 837 ccaccaaaggagcacaagaggtacaaccccaagaaactgacatacgagcagaggaaggcc 896 Query: 486 agcctcgtcgagaggctcaac 506 || ||| | || ||||||||| Sbjct: 897 agtctcattgaaaggctcaac 917
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 416 bits (210), Expect = e-113 Identities = 462/546 (84%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || |||||| ||||||||||||| ||||||| || |||||| || |||||||| Sbjct: 345 ggagtacgagggcaatattgaggccactggggaggactactatgttgaaccagctgatga 404 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||| ||||||||||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 405 aaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccg 464 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 465 tgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaa 524 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 525 gaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagta 584 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 |||||| || ||||| || ||||||||||||||||| | || || |||||||| ||||| Sbjct: 585 catctacggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaa 644 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 | |||| | ||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 645 attccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagc 704 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaa 421 | | ||||||||||| || ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 705 actgtacaagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaa 764 Query: 422 gccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 | | || ||| |||||||| ||||||| ||||||||| |||||||| ||||||| Sbjct: 765 gaaggaaccggcgacccacaagagatacaacctcaagaagctaacctacgaacagaggaa 824 Query: 482 ggccagcctcgtcgagaggctcaacgccctcaacaactctgctggtgccgccgacgatga 541 |||||| || ||||| || | || || |||||| |||||||||||| | || ||||| Sbjct: 825 ggccagtcttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatga 884 Query: 542 cgagga 547 |||||| Sbjct: 885 cgagga 890
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 416 bits (210), Expect = e-113 Identities = 462/546 (84%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || |||||| ||||||||||||| ||||||| || |||||| || |||||||| Sbjct: 441 ggagtacgagggcaatattgaggccactggggaggactactatgttgaaccagctgatga 500 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||| ||||||||||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 501 aaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccg 560 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 561 tgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaa 620 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 621 gaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagta 680 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 |||||| || ||||| || ||||||||||||||||| | || || |||||||| ||||| Sbjct: 681 catctacggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaa 740 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 | |||| | ||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 741 attccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagc 800 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaa 421 | | ||||||||||| || ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 801 actgtacaagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaa 860 Query: 422 gccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 | | || ||| |||||||| ||||||| ||||||||| |||||||| ||||||| Sbjct: 861 gaaggaaccggcgacccacaagagatacaacctcaagaagctaacctacgaacagaggaa 920 Query: 482 ggccagcctcgtcgagaggctcaacgccctcaacaactctgctggtgccgccgacgatga 541 |||||| || ||||| || | || || |||||| |||||||||||| | || ||||| Sbjct: 921 ggccagtcttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatga 980 Query: 542 cgagga 547 |||||| Sbjct: 981 cgagga 986
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 410 bits (207), Expect = e-111 Identities = 423/495 (85%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || |||||||||||||||||||| ||||||| || |||||| || |||||||| Sbjct: 354 ggagtacgagggcaatgttgaggccactggggaggactactatgttgaaccagctgatga 413 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||||||||||||||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 414 aaggaggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccg 473 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 474 tgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaa 533 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 534 gaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagta 593 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 |||||| || ||||| || ||||||||||||||||| | || || |||||||| ||||| Sbjct: 594 catctacggtgggcacgtggctgactacatgaggtctatggctgaggaggaacctgagaa 653 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 | |||| | ||||| ||||||||| ||||||||||||| ||||||| ||||||| | Sbjct: 654 attccaagcccactttagtgagtacctcaagaagggaattgacgctgatggcatggaatc 713 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaa 421 | | ||||||||||| || |||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 714 actgtacaagaaggtccatgctgccatccgcgccgatcctaccatggccaaatcgaccaa 773 Query: 422 gccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 | | || || |||||||| ||||||| ||||||||| ||||||||| ||||||| Sbjct: 774 gaaggaaccggctacccacaagagatacaacctcaagaagctgacctacgagcagaggaa 833 Query: 482 ggccagcctcgtcga 496 |||||| |||||||| Sbjct: 834 ggccagtctcgtcga 848
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 402 bits (203), Expect = e-109 Identities = 462/547 (84%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || |||||| ||||||||||||| ||||||| || |||||| || |||||||| Sbjct: 354 ggagtacgagggcaatattgaggccactggggaggactactatgttgaaccagctgatga 413 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||| ||||||||||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 414 aaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccg 473 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 474 tgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaa 533 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||||||| || ||| |||| |||||||||||||| Sbjct: 534 gaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagta 593 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 |||||| || ||||| || ||||||||||||||||| | || || |||||||| ||||| Sbjct: 594 catctacggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaa 653 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 | |||| | ||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 654 attccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagc 713 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgat-cctagcatggccaaatcaacca 420 | | ||||||||||| || ||||||||||| |||||| |||| ||||||||||||||||| Sbjct: 714 actgtacaagaaggtccatgctgccatccgtgctgatccctaccatggccaaatcaacca 773 Query: 421 agccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagagga 480 || | || ||| |||||||| ||||||| ||||||||| |||||||| |||||| Sbjct: 774 agaaggaaccggcgacccacaagagatacaacctcaagaagctaacctacgaacagagga 833 Query: 481 aggccagcctcgtcgagaggctcaacgccctcaacaactctgctggtgccgccgacgatg 540 ||||||| || ||||| || | || || |||||| |||||||||||| | || |||| Sbjct: 834 aggccagtcttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatg 893 Query: 541 acgagga 547 ||||||| Sbjct: 894 acgagga 900
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 400 bits (202), Expect = e-108 Identities = 461/546 (84%), Gaps = 1/546 (0%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || |||||| ||||||||||||| ||||||| || |||||| || |||||||| Sbjct: 442 ggagtacgagggcaatattgaggccactggggaggactactatgttgaaccagctgatga 501 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||| ||||||||||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct: 502 aaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccg 561 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 562 tgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaa 621 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||||||| || ||| ||| |||||||||||||| Sbjct: 622 gaggtttgctgggttcaagaaggacgagaagcagcttgattctggtattcaccgcaagta 681 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 |||||| || ||||| || ||||||||||||||||| | || || |||||||| ||||| Sbjct: 682 catctacggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaa 741 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 | |||| | ||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 742 attccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagc 801 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaa 421 | | ||||||||||| || ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 802 actgtacaagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaa 861 Query: 422 gccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 | | || ||| |||||||| ||||||| ||||||||| |||||||| ||||||| Sbjct: 862 gaaggaaccggcgacccacaagagatacaacctcaagaagctaacctacgaacagaggaa 921 Query: 482 ggccagcctcgtcgagaggctcaacgccctcaacaactctgctggtgccgccgacgatga 541 |||||| || ||||| || | || || |||||| |||||||||||| | || ||||| Sbjct: 922 ggccagtct-gtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatga 980 Query: 542 cgagga 547 |||||| Sbjct: 981 cgagga 986
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 343 bits (173), Expect = 4e-91 Identities = 422/505 (83%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 428 ggagtacgagggcaatgttgaggccactggtgaggacttctctgttgagccagctgatga 487 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 |||||||||||||||||| |||||||||||||| |||||||||||||| || || ||||| Sbjct: 488 gaggaggcctttccgtgctctcttggatgttggccttatcaggactacaacagggaaccg 547 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||| ||||| || || ||||| ||||| ||||| || || Sbjct: 548 tgtctttggtgccctcaagggagcattggatggaggcctggatattcctcacagcgagaa 607 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| |||||||||||||| ||| |||||||||| | ||||||| ||| Sbjct: 608 gaggtttgctggattcaagaaggacgacaagcagttggatgctgatacccaccgcaggta 667 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 ||||||||| || ||||||||||||||||||| | || || || ||||| || || || Sbjct: 668 catctatggtggccatgttgctgactacatgaagaaccttgctgaagaggagccagaaaa 727 Query: 302 gtaccaaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagc 361 |||||| | |||||||||| |||||| ||||||||| | |||||||| || ||||| Sbjct: 728 gtaccagagccacttcagtgcgtacattaagaagggagttgaggctgatgaaatagaagc 787 Query: 362 agtttacaagaaggttcacgctgccatccgcgctgatcctagcatggccaaatcaaccaa 421 | ||||||||||| || ||||||||||| || |||||| ||| | || |||||||| Sbjct: 788 gctgtacaagaaggtccatgctgccatccgtgccgatccttccattgttaagtcaaccaa 847 Query: 422 gccagctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 || | || ||| || ||||||||||||||||||||||| || || ||| ||||||| Sbjct: 848 gcagccaccaaaggagcataagaggtacaaccccaagaagctgacatatgagcagaggaa 907 Query: 482 ggccagcctcgtcgagaggctcaac 506 |||||||||| | || ||||||||| Sbjct: 908 ggccagcctcattgaaaggctcaac 932
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 301 bits (152), Expect = 1e-78 Identities = 290/336 (86%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 ||||||||| ||||||||||||||||||||||||||||||||||| ||||| || || || Sbjct: 252 ggagtatgagggcaatgttgaggccactggtgaggacttctctgtcgagccagcggaaga 311 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 |||||||||||||||||| ||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 312 gaggaggcctttccgtgccctcttagatgtcggccttattaggactactactggaaaccg 371 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||| |||||||| || |||||||||||||| |||||||| || ||||| ||||| || || Sbjct: 372 tgtctttggtgccctcaagggagctttggatggtggtctagatattcctcacagcgataa 431 Query: 182 gagatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagta 241 ||| |||||||| ||||||||||| || ||| ||||||||||| || || |||||||| Sbjct: 432 gaggtttgctggcttcaagaaggatgataagcagctggatgctgatatccatcgcaagta 491 Query: 242 catctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaa 301 ||||||||| ||||||||||| || |||| | || || |||||||| |||||||| Sbjct: 492 catctatggtctccatgttgctgagtatatgaagaatctggctgatgaggagcccgagaa 551 Query: 302 gtaccaaactcacttcagtgagtacatcaagaaggg 337 |||||| |||||||||| ||||||||||||||||| Sbjct: 552 gtaccaggctcacttcagcgagtacatcaagaaggg 587
>ref|NM_123336.3| Arabidopsis thaliana 5S rRNA binding / structural constituent of ribosome AT5G39740 mRNA, complete cds Length = 1223 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 412 gaggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgct 471 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 472 cttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgcactcaag 531 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 532 ggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 588
>gb|BT008706.1| Arabidopsis thaliana At5g39740 gene, complete cds Length = 906 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 370 gaggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgct 429 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 430 cttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgcactcaag 489 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 490 ggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 546
>gb|AY093123.1| Arabidopsis thaliana ribosomal protein L5 - like (At5g39740) mRNA, complete cds Length = 1100 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 400 gaggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgct 459 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 460 cttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgcactcaag 519 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 520 ggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 576
>gb|AY079020.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1128 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 412 gaggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgct 471 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 472 cttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgcactcaag 531 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 532 ggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 588
>emb|BX831866.1|CNS09ZT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 161 bits (81), Expect = 3e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || ||||||||||| Sbjct: 389 gaggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgct 448 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||||||||||||||||| ||| ||| Sbjct: 449 cttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgaactcaag 508 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 509 ggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 565
>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence Length = 1248 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| |||||||| || |||||||| ||||| Sbjct: 414 gagtatgagggaaacgttgaggccactggagaggacttttccgttgagccaactgattca 473 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 474 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 533 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 534 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 593 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 594 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 653 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 654 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 713 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 714 ttacaaactcacttcagtgcttacatcaagaa 745 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 849 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 893
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 38968709 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 38968768 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 38968769 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 38968828 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 38968829 tggctgactacatgagg 38968845 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 38963391 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 38963450 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 38963451 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 38963510 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 38963511 tggctgactacatgagg 38963527 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||||||||||||| ||||||||||||| ||| Sbjct: 38969058 gaggaacctgagaaattccaagcccacttcagtgagtacctcaagaagggaattgatgct 38969117 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| |||||||||| | ||||||||||| || ||||||||||| |||||||||| |||| Sbjct: 38969118 gatggcatggaagcactgtacaagaaggtccatgctgccatccgtgctgatcctaccatg 38969177 Query: 408 gccaaatcaaccaag 422 ||||||||||||||| Sbjct: 38969178 gccaaatcaaccaag 38969192 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||||||||||||||||| | Sbjct: 38963110 aggccactggggaggactactatgttgaaccagctgatgaaaggaggcctttccgtgctc 38963169 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 38963170 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 38963221 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||| ||||||||||||| | Sbjct: 38968426 aggccactggggaggactactatgttgaaccagctgatgaaaggcggcctttccgtgctc 38968485 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 38968486 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 38968537 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||| ||||||||| ||||||||||||| ||| Sbjct: 38963726 gaggaacctgagaaattccaagcccactttagtgagtacctcaagaagggaattgacgct 38963785 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| ||||||| || | ||||||||||| || |||||||||||||| ||||||| |||| Sbjct: 38963786 gatggcatggaatcactgtacaagaaggtccatgctgccatccgcgccgatcctaccatg 38963845 Query: 408 gccaaatcaaccaag 422 |||||||| |||||| Sbjct: 38963846 gccaaatcgaccaag 38963860 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcga 496 ||||||| ||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 38963971 tacaacctcaagaagctgacctacgagcagaggaaggccagtctcgtcga 38964020 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcgagaggctcaac 506 ||||||| ||||||||| |||||||| ||||||||||||| || ||||| || | || Sbjct: 38969301 tacaacctcaagaagctaacctacgaacagaggaaggccagtcttgtcgaaagattgaat 38969360 Query: 507 gccctcaacaactctgctggtgccgccgacgatgacgagga 547 || |||||| |||||||||||| | || ||||||||||| Sbjct: 38969361 gctctcaactcctctgctggtgctgatgatgatgacgagga 38969401
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 42342 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 42401 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 42402 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 42461 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 42462 tggctgactacatgagg 42478 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 37024 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 37083 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 37084 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 37143 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 37144 tggctgactacatgagg 37160 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||||||||||||| ||||||||||||| ||| Sbjct: 42691 gaggaacctgagaaattccaagcccacttcagtgagtacctcaagaagggaattgatgct 42750 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| |||||||||| | ||||||||||| || ||||||||||| |||||||||| |||| Sbjct: 42751 gatggcatggaagcactgtacaagaaggtccatgctgccatccgtgctgatcctaccatg 42810 Query: 408 gccaaatcaaccaag 422 ||||||||||||||| Sbjct: 42811 gccaaatcaaccaag 42825 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||||||||||||||||| | Sbjct: 36743 aggccactggggaggactactatgttgaaccagctgatgaaaggaggcctttccgtgctc 36802 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 36803 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 36854 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||| ||||||||||||| | Sbjct: 42059 aggccactggggaggactactatgttgaaccagctgatgaaaggcggcctttccgtgctc 42118 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 42119 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 42170 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||| ||||||||| ||||||||||||| ||| Sbjct: 37359 gaggaacctgagaaattccaagcccactttagtgagtacctcaagaagggaattgacgct 37418 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| ||||||| || | ||||||||||| || |||||||||||||| ||||||| |||| Sbjct: 37419 gatggcatggaatcactgtacaagaaggtccatgctgccatccgcgccgatcctaccatg 37478 Query: 408 gccaaatcaaccaag 422 |||||||| |||||| Sbjct: 37479 gccaaatcgaccaag 37493 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcga 496 ||||||| ||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 37604 tacaacctcaagaagctgacctacgagcagaggaaggccagtctcgtcga 37653 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcgagaggctcaac 506 ||||||| ||||||||| |||||||| ||||||||||||| || ||||| || | || Sbjct: 42934 tacaacctcaagaagctaacctacgaacagaggaaggccagtcttgtcgaaagattgaat 42993 Query: 507 gccctcaacaactctgctggtgccgccgacgatgacgagga 547 || |||||| |||||||||||| | || ||||||||||| Sbjct: 42994 gctctcaactcctctgctggtgctgatgatgatgacgagga 43034
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 133495 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 133554 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 133555 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 133614 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 133615 tggctgactacatgagg 133631 Score = 153 bits (77), Expect = 7e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 ||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| |||| Sbjct: 128177 agggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttca 128236 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 |||||||||||||| || ||| |||| |||||||||||||||||||| || ||||| | Sbjct: 128237 agaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacg 128296 Query: 259 ttgctgactacatgagg 275 | ||||||||||||||| Sbjct: 128297 tggctgactacatgagg 128313 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||||||||||||| ||||||||||||| ||| Sbjct: 133844 gaggaacctgagaaattccaagcccacttcagtgagtacctcaagaagggaattgatgct 133903 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| |||||||||| | ||||||||||| || ||||||||||| |||||||||| |||| Sbjct: 133904 gatggcatggaagcactgtacaagaaggtccatgctgccatccgtgctgatcctaccatg 133963 Query: 408 gccaaatcaaccaag 422 ||||||||||||||| Sbjct: 133964 gccaaatcaaccaag 133978 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||||||||||||||||| | Sbjct: 127896 aggccactggggaggactactatgttgaaccagctgatgaaaggaggcctttccgtgctc 127955 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 127956 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 128007 Score = 111 bits (56), Expect = 3e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| ||||||| || |||||| || |||||||| ||| ||||||||||||| | Sbjct: 133212 aggccactggggaggactactatgttgaaccagctgatgaaaggcggcctttccgtgctc 133271 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgc 133 ||||||||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 133272 tcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgc 133323 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 288 gaggaacccgagaagtaccaaactcacttcagtgagtacatcaagaagggaatctcagct 347 |||||||| ||||| | |||| | ||||| ||||||||| ||||||||||||| ||| Sbjct: 128512 gaggaacctgagaaattccaagcccactttagtgagtacctcaagaagggaattgacgct 128571 Query: 348 gatgacatggaagcagtttacaagaaggttcacgctgccatccgcgctgatcctagcatg 407 |||| ||||||| || | ||||||||||| || |||||||||||||| ||||||| |||| Sbjct: 128572 gatggcatggaatcactgtacaagaaggtccatgctgccatccgcgccgatcctaccatg 128631 Query: 408 gccaaatcaaccaag 422 |||||||| |||||| Sbjct: 128632 gccaaatcgaccaag 128646 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcga 496 ||||||| ||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 128757 tacaacctcaagaagctgacctacgagcagaggaaggccagtctcgtcga 128806 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 447 tacaaccccaagaagctcacctacgaggagaggaaggccagcctcgtcgagaggctcaac 506 ||||||| ||||||||| |||||||| ||||||||||||| || ||||| || | || Sbjct: 134087 tacaacctcaagaagctaacctacgaacagaggaaggccagtcttgtcgaaagattgaat 134146 Query: 507 gccctcaacaactctgctggtgccgccgacgatgacgagga 547 || |||||| |||||||||||| | || ||||||||||| Sbjct: 134147 gctctcaactcctctgctggtgctgatgatgatgacgagga 134187
>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent of ribosome AT3G25520 (ATL5) mRNA, complete cds Length = 1254 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 414 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 473 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 474 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 533 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 534 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 593 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 594 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 653 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 654 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 713 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 714 ttacaaactcacttcagtgcttacatcaagaa 745 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 849 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 893
>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 969 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 352 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 411 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 412 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 471 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 472 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 531 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 532 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 591 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 592 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 651 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 652 ttacaaactcacttcagtgcttacatcaagaa 683 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 787 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 831
>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds Length = 906 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 352 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 411 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 412 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 471 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 472 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 531 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 532 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 591 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 592 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 651 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 652 ttacaaactcacttcagtgcttacatcaagaa 683 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 787 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 831
>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 1161 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 411 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 470 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 471 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 530 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 531 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 590 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 591 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 650 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 651 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 710 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 711 ttacaaactcacttcagtgcttacatcaagaa 742 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 846 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 890
>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 1151 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 409 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 468 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 469 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 528 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 529 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 588 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 589 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 648 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 649 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 708 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 709 ttacaaactcacttcagtgcttacatcaagaa 740 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 844 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 888
>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 925 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 352 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 411 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 412 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 471 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 472 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 531 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 532 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 591 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 592 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 651 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 652 ttacaaactcacttcagtgcttacatcaagaa 683 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 787 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 831
>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1108 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 399 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 458 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 459 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 518 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 519 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 578 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 579 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 638 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 639 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 698 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 699 ttacaaactcacttcagtgcttacatcaagaa 730 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 834 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 878
>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds Length = 906 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 352 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 411 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 412 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 471 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 472 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 531 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 532 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 591 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 592 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 651 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 652 ttacaaactcacttcagtgcttacatcaagaa 683 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 787 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 831
>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 384 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 443 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 444 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 503 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 504 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 563 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 564 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 623 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 624 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 683 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 684 ttacaaactcacttcagtgcttacatcaagaa 715 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 819 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 863
>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA, complete cds Length = 1117 Score = 151 bits (76), Expect = 3e-33 Identities = 268/332 (80%) Strand = Plus / Plus Query: 3 gagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgag 62 |||||||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 409 gagtatgagggaaacgttgaggccactggagaagacttttccgttgagccaactgattca 468 Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||| ||||||||||| || | |||||||| ||||||||||| || || ||||||||| Sbjct: 469 aggagacctttccgtgctcttcttgatgttggacttatcaggaccacaacaggaaaccgt 528 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||| ||||| |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 529 gtgttcggtgctcttaagggtgctttggatggtggtcttgatatccctcacagtgacaag 588 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 ||||||||||| ||| | ||||| | ||| || |||||||| || ||| | || ||| Sbjct: 589 agatttgctgggttccacaaggagaacaagcaacttgatgctgaaatccacaggaactac 648 Query: 243 atctatggagggcatgttgctgactacatgaggtcgctagcagatgaggaacccgagaag 302 |||||||| || ||||| | ||||||||| | | | | ||| || || || |||||| Sbjct: 649 atctatggtggccatgtctcaaactacatgaagctgttgggagaagatgagccagagaag 708 Query: 303 taccaaactcacttcagtgagtacatcaagaa 334 | |||||||||||||||| ||||||||||| Sbjct: 709 ttacaaactcacttcagtgcttacatcaagaa 740 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 844 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 888
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 141 bits (71), Expect = 3e-30 Identities = 158/187 (84%) Strand = Plus / Plus Query: 9 gaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatgagaggagg 68 ||||||||||| ||||| |||||||| || | ||| |||||||| || || || ||| Sbjct: 379 gaaggcaatgtggaggctactggtgaagattactcggttgagccagcagacaccagaagg 438 Query: 69 cctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgtgtgttt 128 || |||||||| ||| | |||||||| |||||||| ||||| ||||||||||| || ||| Sbjct: 439 ccattccgtgctctccttgatgttgggcttatcagaactacaactggaaaccgcgttttt 498 Query: 129 ggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaagagattt 188 ||||| || |||||||||||||| ||||| |||||||||| |||||||||||||| ||| Sbjct: 499 ggtgctctgaagggagctttggatggtggattggacattcctcacagtgacaagaggttt 558 Query: 189 gctggtt 195 ||||||| Sbjct: 559 gctggtt 565 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 291 gaacccgagaagtaccaaactcacttcagtgagtacatcaagaaggg 337 ||||| ||||| || ||| |||||||||| ||||||||||||||||| Sbjct: 661 gaacctgagaaatatcaatctcacttcagcgagtacatcaagaaggg 707
>emb|BX832617.1|CNS09YMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 137 bits (69), Expect = 4e-29 Identities = 150/177 (84%) Strand = Plus / Plus Query: 21 gaggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcg 80 ||||||||||| |||||||| ||||| || || ||||| || || |||||||||| Sbjct: 397 gaggccactggagaggacttttctgtggaaccaactgattccagaagaactttccgtgct 456 Query: 81 ctcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaag 140 || | |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 457 cttcttgatgttggacttatcaggactaccactggaaaacgtgtgtttggtgcactcaag 516 Query: 141 ggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||| ||||| || || || || ||||| |||||||||||||||||| Sbjct: 517 ggagctttggacggaggtcttgatatccctcaaagtgaaaagagatttgctggtttc 573
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Plus Query: 63 aggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccgt 122 ||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| ||| Sbjct: 523 aggaggcctttccgtgctctcttggatgttggtcttattagaactactactggaaatcgt 582 Query: 123 gtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaag 182 ||||||||||| || ||||| || ||||| ||||| || || ||||| || |||| ||| Sbjct: 583 gtgtttggtgctctcaagggtgcattggatggtggacttgatattcctcatggtgagaag 642 Query: 183 agatttgctggtttcaagaaggacgagaagtctctggatgctgagattcaccgcaagtac 242 || |||||||| |||| || || ||| || ||||||||| ||||||||||||| Sbjct: 643 aggtttgctggattcagcaaagattccaagcaacttgatgctgaggttcaccgcaagtat 702 Query: 243 atctatggagggcatgttgc 262 || ||||| || |||||||| Sbjct: 703 atatatggtggccatgttgc 722
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 101 bits (51), Expect = 2e-18 Identities = 159/195 (81%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttgaggccactggtgaggacttctctgttgagcctgctgatga 61 ||||||||| |||||||| ||||| | ||| || || | || ||||| || |||||| Sbjct: 413 ggagtatgagggcaatgtagaggctagtggagaagattattcggttgaaccagctgattc 472 Query: 62 gaggaggcctttccgtgcgctcttggatgttggtcttatcaggactacgactggaaaccg 121 ||||||||||||||||| || | ||||||||| | | | ||| || || || ||||| Sbjct: 473 caggaggcctttccgtgctcttcttgatgttggtttggttaagaccacaaccggtaaccg 532 Query: 122 tgtgtttggtgcacttaagggagctttggacggtggtctggacattccccacagtgacaa 181 ||||||||||||||| |||||||||||||| || ||| |||| ||||| ||||||||||| Sbjct: 533 tgtgtttggtgcactcaagggagctttggatggaggtttggatattcctcacagtgacaa 592 Query: 182 gagatttgctggttt 196 || ||||||||||| Sbjct: 593 aaggtttgctggttt 607 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcac 466 |||||||||||||||| ||||||||||| Sbjct: 849 cacaagaggtacaacctgaagaagctcac 877 Score = 40.1 bits (20), Expect = 7.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 306 caaactcacttcagtgagtacatcaagaagggaatctcagctgatgacatggaagcagtt 365 ||||||||||||||| | || |||||||| || || |||||||| || || | | || Sbjct: 717 caaactcacttcagtcaatatatcaagaaagggatagaagctgatggaattgaggaactt 776 Query: 366 tacaagaaggttcacgctgc 385 |||||||||||||| ||||| Sbjct: 777 tacaagaaggttcatgctgc 796
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| |||||||| ||||| || || ||||| || || ||||||||||| | Sbjct: 7915 aggccactggagaggacttttctgtggaaccaactgattccagaagacctttccgtgctc 7974 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaagg 141 | | |||||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 7975 ttcttgatgttggacttatcaggactaccactggaaaccgtgtgtttggtgcactcaagg 8034 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttc 197 |||||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct: 8148 agggagctttggacggaggtcttgatatccctcacagtgacaagagatttgctggtttc 8206
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 79.8 bits (40), Expect = 9e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 22 aggccactggtgaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgc 81 |||||||||| || ||||| || |||||||| ||||| ||||| ||||||||||| | Sbjct: 57081 aggccactggagaagacttttccgttgagccaactgattcaaggagacctttccgtgctc 57022 Query: 82 tcttggatgttggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaagg 141 | | |||||||| ||||||||||| || || |||||||||||||| ||||| ||||||| Sbjct: 57021 ttcttgatgttggacttatcaggaccacaacaggaaaccgtgtgttcggtgctcttaagg 56962 Score = 63.9 bits (32), Expect = 5e-07 Identities = 155/196 (79%) Strand = Plus / Minus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctggtttca 198 |||| |||||||| |||||||| || || || ||||||||||||||||||||||| ||| Sbjct: 56848 agggtgctttggatggtggtcttgatatccctcacagtgacaagagatttgctgggttcc 56789 Query: 199 agaaggacgagaagtctctggatgctgagattcaccgcaagtacatctatggagggcatg 258 | ||||| | ||| || |||||||| || ||| | || ||||||||||| || |||| Sbjct: 56788 acaaggagaacaagcaacttgatgctgaaatccacaggaactacatctatggtggccatg 56729 Query: 259 ttgctgactacatgaggtcgctagcagatgaggaacccgagaagtaccaaactcacttca 318 | | ||||||||| | | | | ||| || || || ||||||| ||||||||||||| Sbjct: 56728 tctcaaactacatgaagctgttgggagaagatgagccagagaagttacaaactcacttca 56669 Query: 319 gtgagtacatcaagaa 334 ||| ||||||||||| Sbjct: 56668 gtgcttacatcaagaa 56653
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 77.8 bits (39), Expect = 4e-11 Identities = 86/98 (87%), Gaps = 4/98 (4%) Strand = Plus / Plus Query: 119 ccgtgtgtttggtg-cacttaaggga-gctttggacggtggtctggacattccccacagt 176 |||||||||||||| |||| |||||| |||||||| || ||| |||| ||||| |||||| Sbjct: 473 ccgtgtgtttggtgacactcaagggaagctttggatggaggtttggatattcctcacagt 532 Query: 177 gacaagagatttgctggttt--caagaaggacgagaag 212 |||||||| ||||||||||| ||| |||||||||||| Sbjct: 533 gacaagaggtttgctggttttgcaacaaggacgagaag 570
>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence Length = 1161 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 33 gaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgctcttggatgtt 92 ||||||| ||||||||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 439 gaggactactctgttgaacctgctgaaagcaggaggcctttccgtgctctcttggacgtc 498 Query: 93 ggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaagggagctttggac 152 || || | || ||||| || || ||||||||||||||||| || ||||| || ||||| Sbjct: 499 ggcctcttaagaactactacagggaaccgtgtgtttggtgctctcaagggtgcattggat 558 Query: 153 ggtgg 157 ||||| Sbjct: 559 ggtgg 563 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 427 ctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 |||||||||| |||||||||||||||| |||||||| || || || |||||||| Sbjct: 833 ctcccaagacacacaagaggtacaaccttaagaagctgacttatgaagagaggaa 887
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 33 gaggacttctctgttgagcctgctgatgagaggaggcctttccgtgcgctcttggatgtt 92 ||||||| ||| ||||| |||||||| ||||||||||||||||| |||||||| || Sbjct: 416 gaggactactccgttgaacctgctgaaagcaggaggcctttccgtgctctcttggacgtc 475 Query: 93 ggtcttatcaggactacgactggaaaccgtgtgtttggtgcacttaagggagctttggac 152 || || | || ||||| || || |||||||| |||||||| || ||||| || ||||| Sbjct: 476 ggcctcttaagaactaccacagggaaccgtgtttttggtgctctcaagggtgcattggat 535 Query: 153 ggtggtctggacattccccacagtgacaagagatttgctgg 193 ||||| | ||||| || || ||||| ||||| |||||||| Sbjct: 536 ggtgggattgacatccctcatagtgagaagaggtttgctgg 576 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 427 ctcccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 |||||||||| |||||||||||||||| |||||||| || || || |||||||| Sbjct: 810 ctcccaagacacacaagaggtacaaccttaagaagctgacttatgaagagaggaa 864 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tacaagaaggttcacgctgccatccgcgc 394 |||||||||||||| |||||||| ||||| Sbjct: 749 tacaagaaggttcatgctgccatacgcgc 777
>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds Length = 399 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 429 cccaagactcacaagaggtacaaccccaagaagctcacctacgaggagaggaa 481 |||||||| |||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 236 cccaagacacacaagaggtacaaccttaagaagctgacctatgaagagaggaa 288 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 229 ttcaccgcaagtacatctatggagggcatgttgctgactacatga 273 ||||||||||||| |||||||| || |||||||||| ||||||| Sbjct: 36 ttcaccgcaagtatatctatggtggccatgttgctgcatacatga 80 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 tacaagaaggttcacgctgccat 388 ||||||||||||||||||||||| Sbjct: 173 tacaagaaggttcacgctgccat 195
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 139 agggagctttggacggtggtctggacattccccacagtgacaagagatttgctgg 193 ||||||| ||||| || |||||||| ||||| |||||||| || ||||||||||| Sbjct: 46778 agggagccttggatgggggtctggatattcctcacagtgataaaagatttgctgg 46724 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 456 aagaagctcacctacgaggagaggaaggc 484 |||||||||||||| |||||||||||||| Sbjct: 46135 aagaagctcacctatgaggagaggaaggc 46107
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || |||||| || |||||||| || ||||||||||| |||||| Sbjct: 1230 tggatgatgagactctccgcaaatatatctatggtggccatgttgctgaatacatg 1285
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 531 gccgacgatgacgaggatgacgag 554 |||||||||||||||||||||||| Sbjct: 1108 gccgacgatgacgaggatgacgag 1131 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gccgacgatgacgaggatga 550 |||||||||||||||||||| Sbjct: 1168 gccgacgatgacgaggatga 1187
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || ||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 20270 tggatgatgagactctccgtaagtatatctatggtggtcatgttgctgaatacatg 20215
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || ||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 569 tggatgatgagactctccgtaagtatatctatggtggtcatgttgctgaatacatg 624
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || |||||| || |||||||| || ||||||||||| |||||| Sbjct: 569 tggatgatgagactctccgcaaatatatctatggtggccatgttgctgaatacatg 624
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || |||||| || |||||||| || ||||||||||| |||||| Sbjct: 605 tggatgatgagactctccgcaaatatatctatggtggccatgttgctgaatacatg 660
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 217 tggatgctgagattcaccgcaagtacatctatggagggcatgttgctgactacatg 272 |||||| ||||| || ||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 431 tggatgatgagactctccgtaagtatatctatggtggtcatgttgctgaatacatg 486
>ref|XM_500389.1| Yarrowia lipolytica CLIB122, YALI0B01540g predicted mRNA Length = 210 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 533 cgacgatgacgaggatgacgagt 555 ||||||||||||||||||||||| Sbjct: 186 cgacgatgacgaggatgacgagt 208
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacgagt 555 ||||||||||||||||||||||| Sbjct: 245173 cgacgatgacgaggatgacgagt 245151
>ref|XM_366233.1| Magnaporthe grisea 70-15 predicted protein (MG10452.4) partial mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 521 tgctggtgccgccgacgatgacgaggatga 550 ||||| |||||||||||||||||| ||||| Sbjct: 423 tgctgctgccgccgacgatgacgacgatga 452 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 521 tgctggtgccgccgacgatgacgaggatga 550 ||||| |||||||||||||||||| ||||| Sbjct: 354 tgctgctgccgccgacgatgacgacgatga 383 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 tgctggtgccgccgacgatgacga 544 ||||| |||||||||||||||||| Sbjct: 630 tgctgctgccgccgacgatgacga 653
>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds, clone: RAFL22-05-O03 Length = 517 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 gagaagtaccaaactcacttcagtgagtacatcaagaa 334 ||||||| |||||||||||||||| ||||||||||| Sbjct: 77 gagaagttacaaactcacttcagtgcttacatcaagaa 114 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 438 cacaagaggtacaaccccaagaagctcacctacgaggagaggaag 482 ||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 218 cacaagaggtacaacttgaagaaacttacttacgaggagaggaag 262
>ref|XM_363564.1| Magnaporthe grisea 70-15 hypothetical protein (MG01490.4) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 529 ccgccgacgatgacgaggatg 549 ||||||||||||||||||||| Sbjct: 281 ccgccgacgatgacgaggatg 261
>gb|BC067999.1| Xenopus tropicalis ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome), mRNA (cDNA clone MGC:69536 IMAGE:5336627), complete cds Length = 2948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttga 22 ||||||||||||||||||||| Sbjct: 2274 ggagtatgaaggcaatgttga 2294
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 150442 cgacgatgacgaggatgacga 150462
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 211 cgacgatgacgaggatgacga 191
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 69393 gaggagaggaaggccagcctc 69373
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 112671 gaggagaggaaggccagcctc 112651
>gb|AF513502.1| Homo sapiens STRA8 (STRA8) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 568 gaggagaggaaggccagcctc 588
>ref|NM_001001213.1| Xenopus tropicalis ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) (ube3a), mRNA Length = 2948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttga 22 ||||||||||||||||||||| Sbjct: 2274 ggagtatgaaggcaatgttga 2294
>emb|AJ890137.1| Murid Herpesvirus 2 r138 gene (partial), r139 gene, r140 gene, r141 gene and r142 gene (partial) Length = 7462 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 3360 cgacgatgacgaggatgacga 3340
>ref|NM_001007318.1| Danio rerio zgc:92173 (zgc:92173), mRNA Length = 4093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttga 22 ||||||||||||||||||||| Sbjct: 2140 ggagtatgaaggcaatgttga 2160
>gb|BC085646.1| Danio rerio zgc:92173, mRNA (cDNA clone MGC:92173 IMAGE:7050907), complete cds Length = 4093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttga 22 ||||||||||||||||||||| Sbjct: 2140 ggagtatgaaggcaatgttga 2160
>gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence Length = 173428 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ccactggtgaggacttctctg 45 ||||||||||||||||||||| Sbjct: 64839 ccactggtgaggacttctctg 64859
>ref|NM_182489.1| Homo sapiens STRA8 (LOC346673), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 568 gaggagaggaaggccagcctc 588
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 13699 cgacgatgacgaggatgacga 13719
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 111746 cgacgatgacgaggatgacga 111766
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 190817 cgacgatgacgaggatgacga 190797
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 942 cgacgatgacgaggatgacga 962
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 92668 gaggagaggaaggccagcctc 92688
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 gaggagaggaaggccagcctc 491 ||||||||||||||||||||| Sbjct: 89850 gaggagaggaaggccagcctc 89870
>emb|CR388007.7| Zebrafish DNA sequence from clone DKEY-22G9 in linkage group 6, complete sequence Length = 221983 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggagtatgaaggcaatgttga 22 ||||||||||||||||||||| Sbjct: 108300 ggagtatgaaggcaatgttga 108320
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 131000 cgacgatgacgaggatgacga 130980
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 115917 cgacgatgacgaggatgacga 115897
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 cgacgatgacgaggatgacga 553 ||||||||||||||||||||| Sbjct: 129640 cgacgatgacgaggatgacga 129620
>dbj|AK115905.1| Ciona intestinalis cDNA, clone:cilv039f09, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 129 ggtgcacttaagggagctttggacggtggtctggacattccccac 173 |||||| | ||||||||| ||||||||||| |||||||||||| Sbjct: 532 ggtgcaatgaagggagctgctgacggtggtctcgacattccccac 576
>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end Length = 2006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 gtgagtacatcaagaagggaa 339 ||||||||||||||||||||| Sbjct: 926 gtgagtacatcaagaagggaa 906
>dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1483D9 Length = 162604 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ccactggtgaggacttctctg 45 ||||||||||||||||||||| Sbjct: 103580 ccactggtgaggacttctctg 103560
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcagctgatgacatggaag 360 |||||||||||||||||||| Sbjct: 367 ctcagctgatgacatggaag 386
>gb|AC113006.9| Mus musculus chromosome 16, clone RP23-332O12, complete sequence Length = 195941 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 aagggaatctcagctgatga 352 |||||||||||||||||||| Sbjct: 107276 aagggaatctcagctgatga 107257
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tgccgccgacgatgacgagg 546 |||||||||||||||||||| Sbjct: 302669 tgccgccgacgatgacgagg 302688
>gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete sequence Length = 193262 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaggccactggtgaggactt 40 |||||||||||||||||||| Sbjct: 122467 gaggccactggtgaggactt 122448
>ref|XM_754221.1| Ustilago maydis 521 hypothetical protein (UM03167.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gacgatgacgaggatgacga 553 |||||||||||||||||||| Sbjct: 1729 gacgatgacgaggatgacga 1748
>ref|XM_754531.1| Ustilago maydis 521 hypothetical protein (UM03477.1) partial mRNA Length = 3900 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gacgatgacgaggatgacga 553 |||||||||||||||||||| Sbjct: 1000 gacgatgacgaggatgacga 1019
>ref|XM_746920.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g08130) partial mRNA Length = 546 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttgagcctgctgatgagagg 65 |||||||||||||||||||| Sbjct: 476 ttgagcctgctgatgagagg 495
>ref|XM_380961.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00785.1) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gacgatgacgaggatgacga 553 |||||||||||||||||||| Sbjct: 574 gacgatgacgaggatgacga 593
>gb|AF315713.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds Length = 1767 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgagga 547 |||||||||||||||||||| Sbjct: 304 gccgccgacgatgacgagga 323
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gcatgttgctgactacatga 273 |||||||||||||||||||| Sbjct: 16507 gcatgttgctgactacatga 16526
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 agaggctcaacgccctcaac 515 |||||||||||||||||||| Sbjct: 125841 agaggctcaacgccctcaac 125822
>gb|BC037840.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4814643) Length = 1531 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tagcatggccaaatcaacca 420 |||||||||||||||||||| Sbjct: 466 tagcatggccaaatcaacca 447
>gb|AY043490.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg1) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgagga 547 |||||||||||||||||||| Sbjct: 364 gccgccgacgatgacgagga 383
>gb|BC047625.1| Homo sapiens cDNA clone IMAGE:4795909 Length = 2187 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gcagtttacaagaaggttcacgct 383 ||||||||||| |||||||||||| Sbjct: 1307 gcagtttacaataaggttcacgct 1284
>gb|BC036587.2| Homo sapiens cDNA clone IMAGE:4799072 Length = 2187 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gcagtttacaagaaggttcacgct 383 ||||||||||| |||||||||||| Sbjct: 1307 gcagtttacaataaggttcacgct 1284
>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4811633), partial cds Length = 4424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tagcatggccaaatcaacca 420 |||||||||||||||||||| Sbjct: 3352 tagcatggccaaatcaacca 3333
>ref|NM_206123.1| Drosophila melanogaster CG33464-PA (CG33464) mRNA, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaggccactggtgaggactt 40 |||||||||||||||||||| Sbjct: 839 gaggccactggtgaggactt 820
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gcagtttacaagaaggttcacgct 383 |||||| ||||||||||||||||| Sbjct: 96318 gcagttcacaagaaggttcacgct 96341
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcagctgatgacatggaag 360 |||||||||||||||||||| Sbjct: 393 ctcagctgatgacatggaag 412
>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone BACR04J01, complete sequence Length = 182560 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gaggccactggtgaggactt 40 |||||||||||||||||||| Sbjct: 180323 gaggccactggtgaggactt 180342
>gb|AY039230.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) mRNA, complete cds Length = 2301 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgagga 547 |||||||||||||||||||| Sbjct: 517 gccgccgacgatgacgagga 536
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gcatgttgctgactacatga 273 |||||||||||||||||||| Sbjct: 611 gcatgttgctgactacatga 630
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgaggatgacgagt 555 ||||||||||| |||||||| ||||||| Sbjct: 24219597 gccgccgacgacgacgaggaggacgagt 24219624
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcagctgatgacatggaag 360 |||||||||||||||||||| Sbjct: 26259363 ctcagctgatgacatggaag 26259382
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 gccgccgacgatgacgaggatgacgagt 555 ||||||||||| |||||||| ||||||| Sbjct: 576 gccgccgacgacgacgaggaggacgagt 549
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 527 tgccgccgacgatgacgaggatgacgag 554 |||||||||||||||||| || |||||| Sbjct: 2243603 tgccgccgacgatgacgatgaagacgag 2243576
>gb|AF457942.1| Zea mays clone cho1c.pk003.i13, mRNA sequence Length = 542 Score = 40.1 bits (20), Expect = 7.7 Identities = 37/42 (88%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 12 ggcaatgttgaggccactggtga-ggacttctctgttgagcc 52 ||||||||| | | ||||||||| |||| ||||||||||||| Sbjct: 414 ggcaatgttnaaggcactggtgaaggacntctctgttgagcc 455
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 tcgagaggctcaacgccctc 512 |||||||||||||||||||| Sbjct: 433367 tcgagaggctcaacgccctc 433386
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcagctgatgacatggaag 360 |||||||||||||||||||| Sbjct: 82204 ctcagctgatgacatggaag 82223
>gb|AE005004.1| Halobacterium sp. NRC-1 section 35 of 170 of the complete genome Length = 11030 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgagga 547 |||||||||||||||||||| Sbjct: 5077 gccgccgacgatgacgagga 5096
>dbj|AB125365.1| Corvus macrorhynchos DRD4 gene for dopamine receptor D4, exon 1, partial cds Length = 182 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 527 tgccgccgacgatgacgaggatga 550 ||||||||||||||| |||||||| Sbjct: 84 tgccgccgacgatgaggaggatga 61
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 528 gccgccgacgatgacgaggatgacgagt 555 ||||||||||| |||||||| ||||||| Sbjct: 570 gccgccgacgacgacgaggaggacgagt 543
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcagctgatgacatggaag 360 |||||||||||||||||||| Sbjct: 367 ctcagctgatgacatggaag 386
>gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41 of 73 of the complete sequence Length = 262533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gaggccactggtgaggactt 40 |||||||||||||||||||| Sbjct: 191891 gaggccactggtgaggactt 191910
>gb|AC005556.1|AC005556 Drosophila melanogaster DNA sequence (P1s DS08658 (D196) and DS00960 (D268)), complete sequence Length = 98695 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaggccactggtgaggactt 40 |||||||||||||||||||| Sbjct: 75475 gaggccactggtgaggactt 75456
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgaggatgacgagt 555 ||||||||||| |||||||| ||||||| Sbjct: 24147803 gccgccgacgacgacgaggaggacgagt 24147830
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 528 gccgccgacgatgacgaggatgacgagt 555 ||||||||||| |||||||| ||||||| Sbjct: 104288 gccgccgacgacgacgaggaggacgagt 104315
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gcagtttacaagaaggttcacgct 383 ||||||||||| |||||||||||| Sbjct: 41675 gcagtttacaataaggttcacgct 41652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,414,972 Number of Sequences: 3902068 Number of extensions: 4414972 Number of successful extensions: 82636 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82072 Number of HSP's gapped (non-prelim): 535 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
