ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469393.1| Oryza sativa (japonica cultivar-group), mRNA 333 3e-88
2dbj|AK103953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 3e-88
3dbj|AK073303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 3e-88
4gb|AY112537.1| Zea mays CL17574_1 mRNA sequence 222 9e-55
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 200 3e-48
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
7gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 200 3e-48
8gb|BT018444.1| Zea mays clone EL01N0403C06.d mRNA sequence 115 1e-22
9ref|NM_118359.2| Arabidopsis thaliana ATCES1 (Acyl-CoA independe... 72 2e-09
10gb|BT008652.1| Arabidopsis thaliana clone RAFL09-74-E03 (R19654)... 72 2e-09
11gb|BT008549.1| Arabidopsis thaliana clone U19654 unknown protein... 72 2e-09
12gb|AY090947.1| Arabidopsis thaliana At4g22330 mRNA sequence 72 2e-09
13dbj|AB063253.1| Arabidopsis thaliana AtCES1 mRNA for Acyl-CoA in... 72 2e-09
14emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, ... 70 8e-09
15emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, B... 70 8e-09
16emb|BX827086.1|CNS0A3AB Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
17gb|BT014130.1| Lycopersicon esculentum clone 133246F, mRNA sequence 52 0.002
18ref|XR_003419.1| PREDICTED: Mus musculus similar to Histone H2B ... 42 1.8
19emb|X90779.1|MMPSHIS2B M.musculus psH2B gene 42 1.8
20emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on ch... 42 1.8
21gb|AY683136.1| Suid herpesvirus 1 strain SH glycoprotein gI (US7... 40 7.0
22gb|AY683135.1| Suid herpesvirus 1 strain LA glycoprotein gI (US7... 40 7.0
23gb|AY683134.1| Suid herpesvirus 1 strain RongA glycoprotein gI (... 40 7.0
24ref|XM_867927.1| PREDICTED: Bos taurus similar to Olfactory rece... 40 7.0
25dbj|AB197878.1| Bombyx mori BmGRP3 mRNA for glycine rich protein... 40 7.0
26gb|AF306511.1|AF306511 Pseudorabies virus Ea glycoprotein I (gI)... 40 7.0
27dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.0

>ref|XM_469393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1344

 Score =  333 bits (168), Expect = 3e-88
 Identities = 312/360 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
           |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 200 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 259

                                                                       
Query: 220 cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
           |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 260 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 319

                                                                       
Query: 280 accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
            || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 320 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 379

                                                                       
Query: 340 gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
            || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 380 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 439

                                                                       
Query: 400 tgcaaccttgcaacatgtcttacagcagagtgatgagactccaatggtgtgggaaatcct 459
           ||| ||||| || || || ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 440 tgccaccttacagcacgttttacagcagagcgatgagactccaatggtgtgggagattct 499

                                                                       
Query: 460 cctatatctgtatgtcctttattcaccagactggcattacaggagcaccatgcctacttt 519
           ||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 500 cctatatctttatgtactttattcaccagactggcattaccggagcactatgcctacttt 559



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>dbj|AK103953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G02, full
           insert sequence
          Length = 1313

 Score =  333 bits (168), Expect = 3e-88
 Identities = 312/360 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
           |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 196 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 255

                                                                       
Query: 220 cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
           |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 256 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 315

                                                                       
Query: 280 accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
            || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 316 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 375

                                                                       
Query: 340 gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
            || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 376 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 435

                                                                       
Query: 400 tgcaaccttgcaacatgtcttacagcagagtgatgagactccaatggtgtgggaaatcct 459
           ||| ||||| || || || ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 436 tgccaccttacagcacgttttacagcagagcgatgagactccaatggtgtgggagattct 495

                                                                       
Query: 460 cctatatctgtatgtcctttattcaccagactggcattacaggagcaccatgcctacttt 519
           ||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 496 cctatatctttatgtactttattcaccagactggcattaccggagcactatgcctacttt 555



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>dbj|AK073303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P22, full
           insert sequence
          Length = 1335

 Score =  333 bits (168), Expect = 3e-88
 Identities = 312/360 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
           |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 218 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 277

                                                                       
Query: 220 cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
           |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 278 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 337

                                                                       
Query: 280 accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
            || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 338 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 397

                                                                       
Query: 340 gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
            || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 398 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 457

                                                                       
Query: 400 tgcaaccttgcaacatgtcttacagcagagtgatgagactccaatggtgtgggaaatcct 459
           ||| ||||| || || || ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 458 tgccaccttacagcacgttttacagcagagcgatgagactccaatggtgtgggagattct 517

                                                                       
Query: 460 cctatatctgtatgtcctttattcaccagactggcattacaggagcaccatgcctacttt 519
           ||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 518 cctatatctttatgtactttattcaccagactggcattaccggagcactatgcctacttt 577



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>gb|AY112537.1| Zea mays CL17574_1 mRNA sequence
          Length = 535

 Score =  222 bits (112), Expect = 9e-55
 Identities = 251/299 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 atggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtgc 220
           ||||| ||||| ||||| || |||||||     ||||| || ||||| |||||| |||||
Sbjct: 209 atggcagattcaatggtagcaagcttctnnnnncctgtgacatcaacgactgagttgtgc 268

                                                                       
Query: 221 gaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgca 280
           |||||||| ||||| | ||||||||||||||| || |||||||||||  |||||||||  
Sbjct: 269 gaggagaattatgcacactcgtcatatatcgcagaattctacaataccatctctaatgtc 328

                                                                       
Query: 281 ccctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaag 340
           || ||| |||||||||| ||||||||| | ||||||||| || ||||  |||| ||||| 
Sbjct: 329 ccatgcgttcttttggcacttattggattagtgaatgctttctgccaaggttttgagaaa 388

                                                                       
Query: 341 cgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttccat 400
           || || || ||||||||||||||||||||||||||| | ||||||||||| || ||||||
Sbjct: 389 cgatttagtgtcctgcacatatccaatatgatacttgctattgggagtatgattttccat 448

                                                                      
Query: 401 gcaaccttgcaacatgtcttacagcagagtgatgagactccaatggtgtgggaaatcct 459
           || |||||||||| | || |||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 449 gccaccttgcaacttctcctacaacagagtgatgagactcctatggtttgggagatcct 507



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  200 bits (101), Expect = 3e-48
 Identities = 212/249 (85%)
 Strand = Plus / Minus

                                                                            
Query: 160      catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
                |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 27726483 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 27726424

                                                                            
Query: 220      cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
                |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 27726423 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 27726364

                                                                            
Query: 280      accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
                 || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 27726363 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 27726304

                                                                            
Query: 340      gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
                 || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 27726303 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 27726244

                         
Query: 400      tgcaacctt 408
                ||| |||||
Sbjct: 27726243 tgccacctt 27726235



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Minus

                                                                            
Query: 419      ttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctt 478
                ||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 27724514 ttacagcagagcgatgagactccaatggtgtgggagattctcctatatctttatgtactt 27724455

                                                         
Query: 479      tattcaccagactggcattacaggagcaccatgcctacttt 519
                ||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 27724454 tattcaccagactggcattaccggagcactatgcctacttt 27724414



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  200 bits (101), Expect = 3e-48
 Identities = 212/249 (85%)
 Strand = Plus / Minus

                                                                            
Query: 160      catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
                |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 27817806 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 27817747

                                                                            
Query: 220      cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
                |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 27817746 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 27817687

                                                                            
Query: 280      accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
                 || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 27817686 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 27817627

                                                                            
Query: 340      gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
                 || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 27817626 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 27817567

                         
Query: 400      tgcaacctt 408
                ||| |||||
Sbjct: 27817566 tgccacctt 27817558



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Minus

                                                                            
Query: 419      ttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctt 478
                ||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 27815837 ttacagcagagcgatgagactccaatggtgtgggagattctcctatatctttatgtactt 27815778

                                                         
Query: 479      tattcaccagactggcattacaggagcaccatgcctacttt 519
                ||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 27815777 tattcaccagactggcattaccggagcactatgcctacttt 27815737



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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  200 bits (101), Expect = 3e-48
 Identities = 212/249 (85%)
 Strand = Plus / Plus

                                                                         
Query: 160   catggcggattcgatggtggcgagcttctgggggcctgttacgtcaacaactgagctgtg 219
             |||||||||||| |||||| | || ||||||||||||||||| |||||||||||||| ||
Sbjct: 87411 catggcggattctatggtgtcaagtttctgggggcctgttacttcaacaactgagctctg 87470

                                                                         
Query: 220   cgaggagaactatgcgcgctcgtcatatatcgcggagttctacaatactctctctaatgc 279
             |||||| || ||||| | |||||||||||| || || |||||||||||| | ||||||| 
Sbjct: 87471 cgaggaaaattatgcacactcgtcatatattgcagaattctacaatactgtttctaatgt 87530

                                                                         
Query: 280   accctgcattcttttggcgcttattggactcgtgaatgctctccgccagcgtttcgagaa 339
              || ||  ||||| |||| ||| ||||||| ||||||||||| |||||  |||| |||||
Sbjct: 87531 tccatgtgttcttctggcacttgttggacttgtgaatgctcttcgccaaggttttgagaa 87590

                                                                         
Query: 340   gcgcttcagcgtcctgcacatatccaatatgatactttccattgggagtatcatcttcca 399
              || ||||| ||||||||||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 87591 acgattcagtgtcctgcacatatccaatatgatacttgctatcggcagtatgatcttcca 87650

                      
Query: 400   tgcaacctt 408
             ||| |||||
Sbjct: 87651 tgccacctt 87659



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Plus

                                                                         
Query: 419   ttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctt 478
             ||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 89380 ttacagcagagcgatgagactccaatggtgtgggagattctcctatatctttatgtactt 89439

                                                      
Query: 479   tattcaccagactggcattacaggagcaccatgcctacttt 519
             ||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 89440 tattcaccagactggcattaccggagcactatgcctacttt 89480



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>gb|BT018444.1| Zea mays clone EL01N0403C06.d mRNA sequence
          Length = 1361

 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                       
Query: 420 tacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtccttt 479
           |||| |||||||| |||||||||||||| ||||| ||||| || ||| ||||||||||||
Sbjct: 406 tacaacagagtgacgagactccaatggtctgggagatccttctttatatgtatgtccttt 465

                                             
Query: 480 attcaccagactggcattacaggagcaccatgcc 513
           ||||||| |||||||||||||||||||| |||||
Sbjct: 466 attcaccggactggcattacaggagcacaatgcc 499



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>ref|NM_118359.2| Arabidopsis thaliana ATCES1 (Acyl-CoA independent ceramide
           synthase); catalytic/ hydrolase, acting on
           carbon-nitrogen (but not peptide) bonds, in li>
           AT4G22330 (ATCES1) mRNA, complete cds
          Length = 1309

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 cacatatccaatatgatactttccattgggagtatcatcttccatgcaaccttgcaacat 415
           ||||| || |||||||||||| | || || || ||  ||| |||||| || |||||||| 
Sbjct: 427 cacatttcgaatatgatacttgctatcggcagcatgctctaccatgccactttgcaacac 486

                                                                       
Query: 416 gtcttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtc 475
           ||   ||| |||||||||||||| |||||||||||||| || || |||||  ||||  ||
Sbjct: 487 gtgcaacaacagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatc 546

                                   
Query: 476 ctttattcaccagactggcattac 499
           ||||| |||||||| |||||||||
Sbjct: 547 ctttactcaccagattggcattac 570



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>gb|BT008652.1| Arabidopsis thaliana clone RAFL09-74-E03 (R19654) unknown protein
           (At4g22330) mRNA, complete cds
          Length = 1204

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 cacatatccaatatgatactttccattgggagtatcatcttccatgcaaccttgcaacat 415
           ||||| || |||||||||||| | || || || ||  ||| |||||| || |||||||| 
Sbjct: 386 cacatttcgaatatgatacttgctatcggcagcatgctctaccatgccactttgcaacac 445

                                                                       
Query: 416 gtcttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtc 475
           ||   ||| |||||||||||||| |||||||||||||| || || |||||  ||||  ||
Sbjct: 446 gtgcaacaacagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatc 505

                                   
Query: 476 ctttattcaccagactggcattac 499
           ||||| |||||||| |||||||||
Sbjct: 506 ctttactcaccagattggcattac 529



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>gb|BT008549.1| Arabidopsis thaliana clone U19654 unknown protein (At4g22330) mRNA,
           complete cds
          Length = 799

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 cacatatccaatatgatactttccattgggagtatcatcttccatgcaaccttgcaacat 415
           ||||| || |||||||||||| | || || || ||  ||| |||||| || |||||||| 
Sbjct: 193 cacatttcgaatatgatacttgctatcggcagcatgctctaccatgccactttgcaacac 252

                                                                       
Query: 416 gtcttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtc 475
           ||   ||| |||||||||||||| |||||||||||||| || || |||||  ||||  ||
Sbjct: 253 gtgcaacaacagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatc 312

                                   
Query: 476 ctttattcaccagactggcattac 499
           ||||| |||||||| |||||||||
Sbjct: 313 ctttactcaccagattggcattac 336



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>gb|AY090947.1| Arabidopsis thaliana At4g22330 mRNA sequence
          Length = 1193

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 cacatatccaatatgatactttccattgggagtatcatcttccatgcaaccttgcaacat 415
           ||||| || |||||||||||| | || || || ||  ||| |||||| || |||||||| 
Sbjct: 386 cacatttcgaatatgatacttgctatcggcagcatgctctaccatgccactttgcaacac 445

                                                                       
Query: 416 gtcttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtc 475
           ||   ||| |||||||||||||| |||||||||||||| || || |||||  ||||  ||
Sbjct: 446 gtgcaacaacagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatc 505

                                   
Query: 476 ctttattcaccagactggcattac 499
           ||||| |||||||| |||||||||
Sbjct: 506 ctttactcaccagattggcattac 529



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>dbj|AB063253.1| Arabidopsis thaliana AtCES1 mRNA for Acyl-CoA independent ceramide
           synthase, complete cds
          Length = 1235

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 cacatatccaatatgatactttccattgggagtatcatcttccatgcaaccttgcaacat 415
           ||||| || |||||||||||| | || || || ||  ||| |||||| || |||||||| 
Sbjct: 427 cacatttcgaatatgatacttgctatcggcagcatgctctaccatgccactttgcaacac 486

                                                                       
Query: 416 gtcttacagcagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtc 475
           ||   ||| |||||||||||||| |||||||||||||| || || |||||  ||||  ||
Sbjct: 487 gtgcaacaacagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatc 546

                                   
Query: 476 ctttattcaccagactggcattac 499
           ||||| |||||||| |||||||||
Sbjct: 547 ctttactcaccagattggcattac 570



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>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57
          Length = 199577

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                         
Query: 425   cagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctttattca 484
             |||||||||||||| |||||||||||||| || || |||||  ||||  ||||||| |||
Sbjct: 35750 cagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatcctttactca 35809

                            
Query: 485   ccagactggcattac 499
             ||||| |||||||||
Sbjct: 35810 ccagattggcattac 35824



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>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project)
          Length = 82891

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                         
Query: 425   cagagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctttattca 484
             |||||||||||||| |||||||||||||| || || |||||  ||||  ||||||| |||
Sbjct: 69655 cagagtgatgagaccccaatggtgtgggagatacttctatacatgtacatcctttactca 69714

                            
Query: 485   ccagactggcattac 499
             ||||| |||||||||
Sbjct: 69715 ccagattggcattac 69729



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>emb|BX827086.1|CNS0A3AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB93ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1137

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 426 agagtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctttattcac 485
           ||||||||||||| |||||||||||||| || || |||||  ||||  ||||||| ||||
Sbjct: 469 agagtgatgagaccccaatggtgtgggagatacttctatacatgtacatcctttactcac 528

                         
Query: 486 cagactggcattac 499
           |||| |||||||||
Sbjct: 529 cagattggcattac 542



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>gb|BT014130.1| Lycopersicon esculentum clone 133246F, mRNA sequence
          Length = 1225

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 429 gtgatgagactccaatggtgtgggaaatcctcctatatctgtatgtcctttattcaccag 488
           |||||||||| |||||||| ||||| || || || ||| | ||| |||| ||||||||||
Sbjct: 437 gtgatgagacaccaatggtctgggagatgcttctgtatatctatatcctctattcaccag 496

                     
Query: 489 actggcatta 498
           | ||||||||
Sbjct: 497 attggcatta 506



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>ref|XR_003419.1| PREDICTED: Mus musculus similar to Histone H2B F (H2B 291A)
           (LOC384052), mRNA
          Length = 377

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  ttggtgccctccaacaccgcg 104
           |||||||||||||||||||||
Sbjct: 346 ttggtgccctccaacaccgcg 326



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>emb|X90779.1|MMPSHIS2B M.musculus psH2B gene
          Length = 1312

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   ttggtgccctccaacaccgcg 104
            |||||||||||||||||||||
Sbjct: 1148 ttggtgccctccaacaccgcg 1128



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>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete
              sequence
          Length = 214456

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     ttggtgccctccaacaccgcg 104
              |||||||||||||||||||||
Sbjct: 140834 ttggtgccctccaacaccgcg 140854



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>gb|AY683136.1| Suid herpesvirus 1 strain SH glycoprotein gI (US7) and glycoprotein
           gE (US8) genes, partial cds
          Length = 848

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 cgatggtggcgagcttctgg 190
           ||||||||||||||||||||
Sbjct: 332 cgatggtggcgagcttctgg 313



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>gb|AY683135.1| Suid herpesvirus 1 strain LA glycoprotein gI (US7) and glycoprotein
           gE (US8) genes, partial cds
          Length = 851

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 cgatggtggcgagcttctgg 190
           ||||||||||||||||||||
Sbjct: 333 cgatggtggcgagcttctgg 314



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>gb|AY683134.1| Suid herpesvirus 1 strain RongA glycoprotein gI (US7) and
           glycoprotein gE (US8) genes, partial cds
          Length = 848

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 cgatggtggcgagcttctgg 190
           ||||||||||||||||||||
Sbjct: 333 cgatggtggcgagcttctgg 314



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>ref|XM_867927.1| PREDICTED: Bos taurus similar to Olfactory receptor 5A2
           (LOC505072), mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  gcactgcacggcacagccca 32
           ||||||||||||||||||||
Sbjct: 132 gcactgcacggcacagccca 113



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>dbj|AB197878.1| Bombyx mori BmGRP3 mRNA for glycine rich protein, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 catggcggattcgatggtgg 179
           ||||||||||||||||||||
Sbjct: 197 catggcggattcgatggtgg 216



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>gb|AF306511.1|AF306511 Pseudorabies virus Ea glycoprotein I (gI) gene, complete cds
          Length = 1187

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  cgatggtggcgagcttctgg 190
            ||||||||||||||||||||
Sbjct: 1117 cgatggtggcgagcttctgg 1098



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 86      ggtgccctccaacaccgcgc 105
               ||||||||||||||||||||
Sbjct: 4922643 ggtgccctccaacaccgcgc 4922662


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,070,715
Number of Sequences: 3902068
Number of extensions: 3070715
Number of successful extensions: 46902
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46795
Number of HSP's gapped (non-prelim): 107
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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