ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20i15 |
|---|---|
| Clone Library Name | barley_pub |
>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 228 Score = 204 bits (520), Expect = 1e-52 Identities = 109/181 (60%), Positives = 119/181 (65%), Gaps = 2/181 (1%) Frame = +2 Query: 23 STCTNVARWYNHIDALLKLSGVTAPGQGVKVLSSIVPETST--TXXXXXXXXXXXXXXXX 196 S+ TNVARW+ HIDALL+LSGVTA GQGVKV S+ VP ST Sbjct: 48 SSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDV 107 Query: 197 XLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKM 376 LF VLLDVKPWDDETDM KLEEAVR++KM Sbjct: 108 DLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKM 167 Query: 377 EGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNK 556 EGLLWGASKL+PVGYGIKKLQIMMTI+DDLVSVD+LIED+ EPANEYIQSCDIVAFNK Sbjct: 168 EGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNK 227 Query: 557 I 559 I Sbjct: 228 I 228
>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 225 Score = 190 bits (483), Expect = 3e-48 Identities = 102/183 (55%), Positives = 115/183 (62%) Frame = +2 Query: 11 SCSPSTCTNVARWYNHIDALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXX 190 S ++ NV RWY+HI ALL+ SGVTA G+GVKV S+ S T Sbjct: 44 SAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTAC-SVSPTADQKAPAADEEDDD 102 Query: 191 XXXLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSI 370 LF VLLDVKPWDDETDM KLEEAVR++ Sbjct: 103 DVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNV 162 Query: 371 KMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAF 550 KMEGLLWGASKL+PVGYGIKKLQIMMTI+DDLVSVD+LIED+ EPANE+IQSCDIVAF Sbjct: 163 KMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAF 222 Query: 551 NKI 559 NKI Sbjct: 223 NKI 225
>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 225 Score = 187 bits (474), Expect = 3e-47 Identities = 100/179 (55%), Positives = 112/179 (62%) Frame = +2 Query: 23 STCTNVARWYNHIDALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXL 202 S NV+RWYNH++ALL++SGV+A G GV V S V T L Sbjct: 48 SKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVA-TPPVADTKASAAEDDDDDDVDL 106 Query: 203 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEG 382 F VLLDVKPWDDETDM KLEEAVRSIKM+G Sbjct: 107 FGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDG 166 Query: 383 LLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 559 LLWGASKL+ VGYGIKKLQIM+TI+DDLVSVD L+ED+L EPANEYIQSCDIVAFNKI Sbjct: 167 LLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 225
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 180 bits (457), Expect = 3e-45 Identities = 101/192 (52%), Positives = 115/192 (59%), Gaps = 6/192 (3%) Frame = +2 Query: 2 TRLSCSP-STCTNVARWYNHIDALLKLSGVTAPGQGVKVLSS--IVPETSTT---XXXXX 163 T LS P S NV+RW+NHIDALL++SGV+A G GV V S I E T Sbjct: 40 TALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKD 99 Query: 164 XXXXXXXXXXXXLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMV 343 LF VL+D+KPWDDETDM Sbjct: 100 TAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMK 159 Query: 344 KLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEY 523 KLEEAVRSI+MEGL WGASKL+PVGYGIKKL IM TI+DDLVS+DT+IE+ L VEP NEY Sbjct: 160 KLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEY 219 Query: 524 IQSCDIVAFNKI 559 +QSCDIVAFNKI Sbjct: 220 VQSCDIVAFNKI 231
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 179 bits (453), Expect = 8e-45 Identities = 96/184 (52%), Positives = 111/184 (60%), Gaps = 5/184 (2%) Frame = +2 Query: 23 STCTNVARWYNHIDALLKLSGVTAPGQGVKVLSS--IVPETSTT---XXXXXXXXXXXXX 187 S N +RWYNHIDALL++SGV+A G GV V S I E T Sbjct: 48 SQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDD 107 Query: 188 XXXXLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRS 367 LF VL+D+KPWDDETDM KLEEAV+S Sbjct: 108 DDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKS 167 Query: 368 IKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVA 547 I+MEGL WGASKL+PVGYGIKKLQI+ TI+DDLVS+DT+IE+ L VEP NEY+QSCDIVA Sbjct: 168 IQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVA 227 Query: 548 FNKI 559 FNKI Sbjct: 228 FNKI 231
>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 230 Score = 170 bits (430), Expect = 4e-42 Identities = 95/185 (51%), Positives = 108/185 (58%), Gaps = 4/185 (2%) Frame = +2 Query: 17 SPSTCTNVARWYNHIDALLKLSGVTAPGQGVKVLSSIVPE---TSTTXXXXXXXXXXXXX 187 S ++ NV+RWY HIDALL++SGV+ G GV V + T Sbjct: 46 SLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDD 105 Query: 188 XXXXLFXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXVLLDVKPWDDETDMVKLEEAVR 364 LF VLLDVKPWDDETDM KLEEAVR Sbjct: 106 DDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVR 165 Query: 365 SIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIV 544 S++ EGL GASKL+PVGYGIKKL IMMTI+DDLVSVD LIED+L VEP NEY+QSCDIV Sbjct: 166 SVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIV 225 Query: 545 AFNKI 559 AFNKI Sbjct: 226 AFNKI 230
>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 223 Score = 156 bits (394), Expect = 5e-38 Identities = 89/181 (49%), Positives = 101/181 (55%), Gaps = 6/181 (3%) Frame = +2 Query: 35 NVARWYNHIDALL------KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXX 196 N ARWY+ + A L K GV PG G +S Sbjct: 52 NAARWYDTVAAALASRFPGKAVGVNLPGGGAA--------SSAAAAAPAAKDADEDDDDL 103 Query: 197 XLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKM 376 LF VLLDVKPWDDETDM KLEEAVRS++M Sbjct: 104 DLFGDETEEDKKAADERAASKASSKKKESGKSS-VLLDVKPWDDETDMKKLEEAVRSVQM 162 Query: 377 EGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNK 556 EGL WGASKL+PVGYGIKKLQIM+TI+DDLVSVD+LIE+HL EP NE++QSCDIVAFNK Sbjct: 163 EGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNK 222 Query: 557 I 559 I Sbjct: 223 I 223
>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation| factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) Length = 228 Score = 149 bits (375), Expect = 9e-36 Identities = 87/179 (48%), Positives = 100/179 (55%), Gaps = 4/179 (2%) Frame = +2 Query: 35 NVARWYNHIDALLKLSGVTAPGQ--GVKVLSSIVP--ETSTTXXXXXXXXXXXXXXXXXL 202 N ++WY+ + + L S PG+ GV+V + P E L Sbjct: 53 NASKWYDSVASHLAKS---FPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDL 109 Query: 203 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEG 382 F VLL+VKPWDDETDM KLEEAVRS++M G Sbjct: 110 FADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPG 169 Query: 383 LLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 559 L WGASKL+PVGYGIKKL IMMTI+DDLVSVD LIEDHL EP NEYIQS DIVAFNKI Sbjct: 170 LTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation| factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta' 2) (EF-1-beta' 2) Length = 224 Score = 144 bits (363), Expect = 2e-34 Identities = 70/87 (80%), Positives = 75/87 (86%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 VL+DVKPWDDETDM KLEEAVR ++M GL WGASKL+PVGYGIKKL IM TI+DDLVS D Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPD 197 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 LIED L EP NEYIQSCDIVAFNKI Sbjct: 198 NLIEDFLTSEPNNEYIQSCDIVAFNKI 224
>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 215 Score = 142 bits (359), Expect = 6e-34 Identities = 70/87 (80%), Positives = 77/87 (88%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 VL+D+KPWDDETDM KLEEAVRS++MEGL WGASKLMPVGYGIKKLQIM+TIIDDL S Sbjct: 131 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLAS-- 188 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 T IE+ LC P NEY+QSCDIVAFNKI Sbjct: 189 TPIEEVLCEAPINEYVQSCDIVAFNKI 215
>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)| Length = 227 Score = 115 bits (289), Expect = 8e-26 Identities = 57/87 (65%), Positives = 67/87 (77%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VRSI+MEGL+WGASKL+PVGYGIKKLQI + DD V D Sbjct: 144 ILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTD 203 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ E +++QS D+ AFNKI Sbjct: 204 VLEENITAFE---DFVQSMDVAAFNKI 227
>EF1B2_BOMMO (P29522) Elongation factor 1-beta'| Length = 221 Score = 114 bits (286), Expect = 2e-25 Identities = 57/87 (65%), Positives = 68/87 (78%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM ++E VR+I+MEGLLWGASKL+PVGYGI KLQIM I DD VSVD Sbjct: 138 ILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVD 197 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E ++ +++QS DI AFNKI Sbjct: 198 LLTEK---IQEFEDFVQSVDIAAFNKI 221
>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)| Length = 221 Score = 114 bits (284), Expect = 3e-25 Identities = 68/175 (38%), Positives = 83/175 (47%) Frame = +2 Query: 35 NVARWYNHIDALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXX 214 NVARWY HI + G + L+ P + Sbjct: 50 NVARWYRHIASFEAAERAAWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDDEEDE 109 Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMVKLEEAVRSIKMEGLLWG 394 VLLDVKPWDDETDM ++E VR+I+M+GLLWG Sbjct: 110 EAERIKQERVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWG 169 Query: 395 ASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANEYIQSCDIVAFNKI 559 ASKL+PVGYGI KLQIM I DD VS+D L E +E +++QS DI AFNKI Sbjct: 170 ASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEK---IEEFEDFVQSVDIAAFNKI 221
>EF1D_XENLA (P29693) Elongation factor 1-delta (EF-1-delta) (P36)| Length = 265 Score = 113 bits (283), Expect = 4e-25 Identities = 54/87 (62%), Positives = 67/87 (77%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VR+++M+GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 241 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ + +Y+QS DI AFNKI Sbjct: 242 ILEEE---ITKFEDYVQSVDIAAFNKI 265
>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 113 bits (283), Expect = 4e-25 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDMVKLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 113 bits (282), Expect = 5e-25 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E + +EY+QS D+ AFNKI Sbjct: 201 MLEEQ---ITAFDEYVQSMDVAAFNKI 224
>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 112 bits (279), Expect = 1e-24 Identities = 55/87 (63%), Positives = 65/87 (74%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE VRSI+ +GL+WG+SKL+PVGYGIKKLQI + DD V D Sbjct: 141 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 200 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E E +Y+QS D+ AFNKI Sbjct: 201 MLEEQITAFE---DYVQSMDVAAFNKI 224
>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)| Length = 226 Score = 111 bits (278), Expect = 2e-24 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM KLEE +RSI+M+GLLWG+SKL+PVGYGIKKLQI + DD V D Sbjct: 143 ILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 202 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E E +++QS D+ AFNKI Sbjct: 203 VLEEKITAFE---DFVQSMDVAAFNKI 226
>EF1D_ARTSA (P32192) Elongation factor 1-delta (EF-1-delta)| Length = 237 Score = 110 bits (276), Expect = 3e-24 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLD+KPWDDETDM +E VRSI M+GL+WGASKL+PV +G+KKLQI + DD VSVD Sbjct: 154 ILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVD 213 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L+E +E +Y+QS DI AFNKI Sbjct: 214 ELVEK---IEAFEDYVQSVDIAAFNKI 237
>EF1D_RABIT (P53787) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 109 bits (272), Expect = 8e-24 Identities = 52/87 (59%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM +LE VRS++++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ + E++QS DI AFNKI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFNKI 280
>EF1D_HUMAN (P29692) Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4)| Length = 280 Score = 109 bits (272), Expect = 8e-24 Identities = 53/87 (60%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM +LE VRSI+++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ + E++QS DI AFNKI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFNKI 280
>EF1D_MOUSE (P57776) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 107 bits (267), Expect = 3e-23 Identities = 52/87 (59%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +LLDVKPWDDETDM +LE VRSI+++GL+WGASKL+PVGYGI+KLQI + DD V D Sbjct: 197 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 256 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ + E++QS DI AF+KI Sbjct: 257 LLEEE---ITKFEEHVQSVDIAAFDKI 280
>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)| Length = 206 Score = 106 bits (264), Expect = 6e-23 Identities = 48/87 (55%), Positives = 67/87 (77%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V+LD+KPWDDETDM ++E+ VRS++M+GL+WGA+KL+P+ YGIKKL IM + DD VS+D Sbjct: 123 VILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSID 182 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E + +++QS DI AFNK+ Sbjct: 183 ELQEK---ISEFEDFVQSVDIAAFNKV 206
>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1| (EF-1-beta/delta 1) Length = 213 Score = 105 bits (263), Expect = 8e-23 Identities = 53/87 (60%), Positives = 68/87 (78%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+WG +KL+P+GYGIKKLQI+ I D VSVD Sbjct: 129 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVD 188 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 LIE +++QS DIVAFNKI Sbjct: 189 DLIEK--ITGDFEDHVQSVDIVAFNKI 213
>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2| (EF-1-beta/delta 2) Length = 262 Score = 105 bits (263), Expect = 8e-23 Identities = 53/87 (60%), Positives = 68/87 (78%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V+LDVKPWDDETD+ ++E+ VRSI+M+GL+WG +KL+P+GYGIKKLQI+ I D VSVD Sbjct: 178 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVD 237 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 LIE +++QS DIVAFNKI Sbjct: 238 DLIEK--ITGDFEDHVQSVDIVAFNKI 262
>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)| Length = 214 Score = 99.4 bits (246), Expect = 8e-21 Identities = 48/87 (55%), Positives = 66/87 (75%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V LDVKPWDDET M +LE+AVRSI+M+GL+WG SKL+PVG+G+ K QI + + DD VS++ Sbjct: 131 VTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLE 190 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ +E +Y+QS DI A +K+ Sbjct: 191 ALQEE---LEGFEDYVQSTDIAAMSKL 214
>EF1D_DROME (Q9VL18) Probable elongation factor 1-delta (EF-1-delta)| Length = 256 Score = 99.0 bits (245), Expect = 1e-20 Identities = 46/87 (52%), Positives = 62/87 (71%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 ++LDVKPWDDETD+ +E +R I +GLLWGASK +PV +GI+KL I + DD VS+D Sbjct: 173 IILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSID 232 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E+ +E +++QS DI AFNKI Sbjct: 233 WLTEE---IEKLEDFVQSVDIAAFNKI 256
>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)| Length = 213 Score = 90.5 bits (223), Expect = 4e-18 Identities = 46/87 (52%), Positives = 61/87 (70%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V LDVKPWDDETD+ +L V++I+MEGL WGA + +PVG+GIKKLQI + + D LVS+D Sbjct: 130 VTLDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDALVSLD 189 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L VE +++QS DI A K+ Sbjct: 190 DL---QAAVEEDEDHVQSTDIAAMQKL 213
>EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) (Translation| elongation factor 1B alpha) (Eukaryotic elongation factor 1Balpha) (eEF1Balpha) Length = 205 Score = 88.2 bits (217), Expect = 2e-17 Identities = 42/87 (48%), Positives = 61/87 (70%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 V LDVKPWDDET++ ++ V++I+MEGL WGA + +P+G+GIKKLQI + DD VS+D Sbjct: 122 VTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLD 181 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L + +E +++QS DI A K+ Sbjct: 182 DLQQS---IEEDEDHVQSTDIAAMQKL 205
>EF1B_TRYCR (P34827) 25 kDa elongation factor 1-beta (EF-1-beta)| Length = 222 Score = 81.6 bits (200), Expect = 2e-15 Identities = 42/87 (48%), Positives = 57/87 (65%) Frame = +2 Query: 299 VLLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVD 478 +L DVKPWDD D+ L + ++K +GLLWG KL+PV +G+KKLQ ++ I DD V D Sbjct: 139 ILFDVKPWDDTVDLQALANKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKVLSD 198 Query: 479 TLIEDHLCVEPANEYIQSCDIVAFNKI 559 L E + E + +QS DIVA+NKI Sbjct: 199 DLEELIMSFE---DEVQSMDIVAWNKI 222
>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 77.0 bits (188), Expect = 4e-14 Identities = 41/83 (49%), Positives = 48/83 (57%) Frame = +2 Query: 311 VKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIE 490 VKPWDDE M KLEE V SI+ +GL+ L+PVGYGIK DD V D L E Sbjct: 145 VKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEE 204 Query: 491 DHLCVEPANEYIQSCDIVAFNKI 559 E +Y+QS D+ AFNKI Sbjct: 205 QITAFE---DYVQSMDVAAFNKI 224
>EF1B_ARCFU (O29681) Elongation factor 1-beta (EF-1-beta) (aEF-1beta)| Length = 88 Score = 36.6 bits (83), Expect = 0.062 Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Frame = +2 Query: 311 VKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSV-DTLI 487 V P D + D+ ++ E +++I+MEG+ S + P+ +G+K + ++M ++ D+ + D I Sbjct: 10 VMPSDVDVDLNEVLEKIKNIQMEGVEIRDSAIQPIAFGLKAI-VLMAVMPDMEGIGDRYI 68 Query: 488 ED 493 E+ Sbjct: 69 EE 70
>ATS18_MOUSE (Q4VC17) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 18) (ADAM-TS 18) (ADAM-TS18) Length = 1219 Score = 30.4 bits (67), Expect = 4.5 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 13 LLPIDLHQCCKVVQSH*CAPEAEWSYCPWSRC 108 L P+ +V SH C PE WS PWS+C Sbjct: 974 LCPVSTPTQVQVCNSHACPPE--WSPSPWSQC 1003
>SYM_BACTN (Q8A3M1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 679 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 350 EEAVRSIKMEGLLW---GASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIEDHLCVEPANE 520 E+ + + ME W G + L+PVG+ + K +++ I+D V ++ ++ L + ANE Sbjct: 503 EKLRKMLNMESFEWSELGRNDLLPVGHQLNKPELLFEKIEDSV-IEAQVQKLLDTKKANE 561
>HGF_RAT (P17945) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 70 PEAEWSYCPWSRCEGSVINCP*NLNY 147 P W YCP SRCEG NL++ Sbjct: 458 PLVPWDYCPISRCEGDTTPTIVNLDH 483
>ISPE_PELLD (Q3B2S6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 287 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -1 Query: 457 NDGHHNLELLDAISNWHE-LGSTPQKALHLDASDSFL*LDHVSLII 323 +DG+HNLE + A +WH+ L +P A+ + +++ L D +L I Sbjct: 23 DDGYHNLETIFAPVSWHDTLCFSPADAISMRCTNADLPTDGSNLCI 68
>HGF_MOUSE (Q08048) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 70 PEAEWSYCPWSRCEGSVINCP*NLNY 147 P W YCP SRCEG NL++ Sbjct: 458 PLIPWDYCPISRCEGDTTPTIVNLDH 483
>HGF_HUMAN (P14210) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 70 PEAEWSYCPWSRCEGSVINCP*NLNY 147 P W YCP SRCEG NL++ Sbjct: 457 PLIPWDYCPISRCEGDTTPTIVNLDH 482
>YLIE_ECOLI (P75800) Hypothetical protein yliE| Length = 782 Score = 29.3 bits (64), Expect = 10.0 Identities = 23/84 (27%), Positives = 37/84 (44%) Frame = +2 Query: 302 LLDVKPWDDETDMVKLEEAVRSIKMEGLLWGASKLMPVGYGIKKLQIMMTIIDDLVSVDT 481 LL + +D E+ +K + S + L G KL G++ ++ + + + Sbjct: 367 LLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLC----GLEAVEAVFGVDER-----N 417 Query: 482 LIEDHLCVEPANEYIQSCDIVAFN 553 I LC A +Y Q CDIV FN Sbjct: 418 KIVRKLCQRIAEKYAQCCDIVTFN 441
>SYM_METCA (Q60CR0) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 694 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +2 Query: 344 KLEEAVRS-IKMEGLLW-GASKLMPVGYGIKKLQIMMTIIDDLVSVDTLIE 490 +L EAV +K+ L W A L+P G+ I Q +MT ID VD L+E Sbjct: 504 RLAEAVEGFLKIPSLTWQDAQTLLPQGHTINDYQHLMTRIDP-KQVDALVE 553
>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 9) (ADAM-TS 9) (ADAM-TS9) Length = 1935 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +1 Query: 19 PIDLHQCCKVVQSH*CAPEAEWSYCPWSRCEGS 117 P D QC +H C +A WS PWS C S Sbjct: 1428 PPDREQC----NTHACPHDAAWSTGPWSSCSVS 1456 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,865,104 Number of Sequences: 219361 Number of extensions: 1449892 Number of successful extensions: 4408 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4381 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
