ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479405.1| Oryza sativa (japonica cultivar-group), mRNA 52 5e-04
2ref|XM_479404.1| Oryza sativa (japonica cultivar-group), mRNA 52 5e-04
3dbj|AK100864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
4dbj|AK100166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 5e-04
5dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 42 0.46
6ref|XM_231168.3| PREDICTED: Rattus norvegicus centrosomal protei... 42 0.46
7gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosom... 40 1.8
8gb|AY368999.1| Diplodactylus assimilis NADH dehydrogenase subuni... 40 1.8
9ref|XM_883459.1| Leishmania major strain Friedlin hypothetical p... 40 1.8
10emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 40 1.8
11gb|AC123534.3| Mus musculus BAC clone RP23-356I5 from chromosome... 40 1.8
12gb|AC107954.5| Homo sapiens chromosome 15, clone RP11-320A16, co... 40 1.8
13gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp... 40 1.8
14gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complet... 40 1.8
15ref|NM_102837.1| Arabidopsis thaliana unknown protein AT1G30990 ... 38 7.1
16ref|NM_195253.1| Oryza sativa (japonica cultivar-group) hypothet... 38 7.1
17ref|NM_191039.1| Oryza sativa (japonica cultivar-group), predic... 38 7.1
18ref|XM_513800.1| PREDICTED: Pan troglodytes LOC457298 (LOC457298... 38 7.1
19gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome... 38 7.1
20gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer ... 38 7.1
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 7.1
22gb|AY192358.1| Synthetic construct beta-galactosidase (lacZnls12... 38 7.1
23gb|AY192357.1| Synthetic construct beta-galactosidase (lacznls7c... 38 7.1
24gb|AY192356.1| Synthetic construct beta-galactosidase (lacZco) g... 38 7.1
25gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, comp... 38 7.1
26gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete se... 38 7.1
27emb|AL365436.26| Human DNA sequence from clone RP11-74C1 on chro... 38 7.1
28gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hosp... 38 7.1
29emb|CR858813.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0118 (from cl... 38 7.1
30ref|NM_020770.1| Homo sapiens cingulin (CGN), mRNA 38 7.1
31dbj|AK096600.1| Homo sapiens cDNA FLJ39281 fis, clone OCBBF20110... 38 7.1
32dbj|AK161552.1| Mus musculus adult male pituitary gland cDNA, RI... 38 7.1
33gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome... 38 7.1
34dbj|AK002748.1| Mus musculus adult male kidney cDNA, RIKEN full-... 38 7.1
35dbj|AK011591.1| Mus musculus 10 days embryo whole body cDNA, RIK... 38 7.1
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
39gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.1
40gb|AF263462.1|AF263462 Homo sapiens cingulin mRNA, complete cds 38 7.1
41ref|XM_574737.1| PREDICTED: Rattus norvegicus similar to Protein... 38 7.1
42dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
43dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.1
44dbj|AK111414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.1
45gb|AC154011.3| Mus musculus 6 BAC RP24-261O15 (Roswell Park Canc... 38 7.1
46emb|CT033763.2| Medicago truncatula chromosome 5 clone mth2-139a... 38 7.1
47emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-8... 38 7.1
48emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-6... 38 7.1
49dbj|AP001007.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.1
50dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.1
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.1
52ref|NM_029816.1| Mus musculus RIKEN cDNA 2610028H24 gene (261002... 38 7.1
53gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, comple... 38 7.1
54gb|BC051454.1| Mus musculus RIKEN cDNA 2610028H24 gene, mRNA (cD... 38 7.1
55dbj|AB037740.1| Homo sapiens mRNA for KIAA1319 protein, partial cds 38 7.1 
>ref|XM_479405.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1786

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 76  ggcgagggagcagcagctgatggagactctcaaaggtccggatcgngcatttgnggatct 135
           ||||||||||||  | || |||||||| |||||||||||  |||| |||||||  |||||
Sbjct: 631 ggcgagggagcaagaactaatggagacactcaaaggtccaaatcgtgcatttggtgatct 690

               
Query: 136 catt 139
           ||||
Sbjct: 691 catt 694
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>ref|XM_479404.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1646

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 76  ggcgagggagcagcagctgatggagactctcaaaggtccggatcgngcatttgnggatct 135
           ||||||||||||  | || |||||||| |||||||||||  |||| |||||||  |||||
Sbjct: 409 ggcgagggagcaagaactaatggagacactcaaaggtccaaatcgtgcatttggtgatct 468

               
Query: 136 catt 139
           ||||
Sbjct: 469 catt 472
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>dbj|AK100864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123P07, full
           insert sequence
          Length = 1644

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 76  ggcgagggagcagcagctgatggagactctcaaaggtccggatcgngcatttgnggatct 135
           ||||||||||||  | || |||||||| |||||||||||  |||| |||||||  |||||
Sbjct: 407 ggcgagggagcaagaactaatggagacactcaaaggtccaaatcgtgcatttggtgatct 466

               
Query: 136 catt 139
           ||||
Sbjct: 467 catt 470
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>dbj|AK100166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A05, full
           insert sequence
          Length = 1785

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 76  ggcgagggagcagcagctgatggagactctcaaaggtccggatcgngcatttgnggatct 135
           ||||||||||||  | || |||||||| |||||||||||  |||| |||||||  |||||
Sbjct: 630 ggcgagggagcaagaactaatggagacactcaaaggtccaaatcgtgcatttggtgatct 689

               
Query: 136 catt 139
           ||||
Sbjct: 690 catt 693
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     gttgatgggaaggaggaagat 49
              |||||||||||||||||||||
Sbjct: 369537 gttgatgggaaggaggaagat 369517
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>ref|XM_231168.3| PREDICTED: Rattus norvegicus centrosomal protein 1 (predicted)
            (Cep1_predicted), mRNA
          Length = 7779

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 81   gggagcagcagctgatggaga 101
            |||||||||||||||||||||
Sbjct: 6872 gggagcagcagctgatggaga 6892
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>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence
          Length = 211662

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gttgatgggaaggaggaaga 48
              ||||||||||||||||||||
Sbjct: 167898 gttgatgggaaggaggaaga 167879
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>gb|AY368999.1| Diplodactylus assimilis NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial
          Length = 1778

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   tgatgggaaggaggaagatg 50
            ||||||||||||||||||||
Sbjct: 1347 tgatgggaaggaggaagatg 1328
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>ref|XM_883459.1| Leishmania major strain Friedlin hypothetical protein (P1105.03)
            partial mRNA
          Length = 3741

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   ggagcagcagctgatggaga 101
            ||||||||||||||||||||
Sbjct: 1274 ggagcagcagctgatggaga 1255
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ggagcagcagctgatggaga 101
             ||||||||||||||||||||
Sbjct: 32621 ggagcagcagctgatggaga 32640
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>gb|AC123534.3| Mus musculus BAC clone RP23-356I5 from chromosome 14, complete
            sequence
          Length = 205222

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gttgatgggaaggaggaaga 48
            ||||||||||||||||||||
Sbjct: 2603 gttgatgggaaggaggaaga 2584
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>gb|AC107954.5| Homo sapiens chromosome 15, clone RP11-320A16, complete sequence
          Length = 63733

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    gagggagcagcagctgatgg 98
             ||||||||||||||||||||
Sbjct: 45289 gagggagcagcagctgatgg 45308
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>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence
          Length = 171297

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     gagggagcagcagctgatgg 98
              ||||||||||||||||||||
Sbjct: 153727 gagggagcagcagctgatgg 153746
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>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence
          Length = 197652

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    cgagggcttgttgatgggaaggag 43
             |||||||||||||| |||||||||
Sbjct: 25784 cgagggcttgttgaggggaaggag 25761
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>ref|NM_102837.1| Arabidopsis thaliana unknown protein AT1G30990 mRNA, complete cds
          Length = 459

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 30  ttgatgggaaggaggaaga 48
           |||||||||||||||||||
Sbjct: 185 ttgatgggaaggaggaaga 203
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>ref|NM_195253.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBb0009C07.6), mRNA
          Length = 2127

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 87   agcagctgatggagactct 105
            |||||||||||||||||||
Sbjct: 1334 agcagctgatggagactct 1352
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>ref|NM_191039.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 55  gcgtcagcggcaggagaacacgg 77
           ||||||||||||||||| |||||
Sbjct: 137 gcgtcagcggcaggagaccacgg 159
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>ref|XM_513800.1| PREDICTED: Pan troglodytes LOC457298 (LOC457298), mRNA
          Length = 3063

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 82  ggagcagcagctgatggagactc 104
           |||||||||||||| ||||||||
Sbjct: 114 ggagcagcagctgaaggagactc 136
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>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0009C07, complete sequence
          Length = 124266

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    agcagctgatggagactct 105
             |||||||||||||||||||
Sbjct: 26640 agcagctgatggagactct 26622
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>gb|AC168278.2| Mus musculus  BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 247493

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    agcagcagctgatggagac 102
             |||||||||||||||||||
Sbjct: 36656 agcagcagctgatggagac 36674
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 79       gagggagcagcagctgatg 97
                |||||||||||||||||||
Sbjct: 12688511 gagggagcagcagctgatg 12688529
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>gb|AY192358.1| Synthetic construct beta-galactosidase (lacZnls12co) gene, complete
            cds
          Length = 3150

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 84   agcagcagctgatggagac 102
            |||||||||||||||||||
Sbjct: 2963 agcagcagctgatggagac 2981
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>gb|AY192357.1| Synthetic construct beta-galactosidase (lacznls7co) gene, complete
            cds
          Length = 3135

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 84   agcagcagctgatggagac 102
            |||||||||||||||||||
Sbjct: 2948 agcagcagctgatggagac 2966
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>gb|AY192356.1| Synthetic construct beta-galactosidase (lacZco) gene, complete cds
          Length = 3114

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 84   agcagcagctgatggagac 102
            |||||||||||||||||||
Sbjct: 2927 agcagcagctgatggagac 2945
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>gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, complete sequence
          Length = 138740

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   acggcgagggagcagcagc 92
            |||||||||||||||||||
Sbjct: 8811 acggcgagggagcagcagc 8829
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>gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete sequence
          Length = 134674

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    gcagctgatggagactctc 106
             |||||||||||||||||||
Sbjct: 47197 gcagctgatggagactctc 47179
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>emb|AL365436.26| Human DNA sequence from clone RP11-74C1 on chromosome 1 Contains the
             CGN gene for cingulin, the TUFT1 gene for tuftelin 1, a
             ribosomal protein S10 (RPS10) pseudogene and two CpG
             isalnds, complete sequence
          Length = 91830

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 82    ggagcagcagctgatggagactc 104
             |||||||||||||| ||||||||
Sbjct: 23135 ggagcagcagctgaaggagactc 23157
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>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 212568

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 87     agcagctgatggagactct 105
              |||||||||||||||||||
Sbjct: 122680 agcagctgatggagactct 122698
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>emb|CR858813.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0118 (from clone DKFZp469P0118)
          Length = 4914

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 82   ggagcagcagctgatggagactc 104
            |||||||||||||| ||||||||
Sbjct: 2463 ggagcagcagctgaaggagactc 2485
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>ref|NM_020770.1| Homo sapiens cingulin (CGN), mRNA
          Length = 5142

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 82   ggagcagcagctgatggagactc 104
            |||||||||||||| ||||||||
Sbjct: 2377 ggagcagcagctgaaggagactc 2399
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>dbj|AK096600.1| Homo sapiens cDNA FLJ39281 fis, clone OCBBF2011067, highly similar to
            Homo sapiens cingulin mRNA
          Length = 2827

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 82   ggagcagcagctgatggagactc 104
            |||||||||||||| ||||||||
Sbjct: 1297 ggagcagcagctgaaggagactc 1319
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>dbj|AK161552.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330406A07 product:hypothetical
           Proline-rich region profile containing protein, full
           insert sequence
          Length = 1465

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  gggagcagcagctgatgga 99
           |||||||||||||||||||
Sbjct: 161 gggagcagcagctgatgga 179
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>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence
          Length = 243976

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     gggagcagcagctgatgga 99
              |||||||||||||||||||
Sbjct: 236295 gggagcagcagctgatgga 236313
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>dbj|AK002748.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610033M10 product:unclassifiable, full
           insert sequence
          Length = 1104

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 84  agcagcagctgatggagac 102
           |||||||||||||||||||
Sbjct: 225 agcagcagctgatggagac 243
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>dbj|AK011591.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610028H24 product:weakly
           similar to PROTEIN C21ORF58 [Homo sapiens], full insert
           sequence
          Length = 1594

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  gggagcagcagctgatgga 99
           |||||||||||||||||||
Sbjct: 307 gggagcagcagctgatgga 325
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 87      agcagctgatggagactct 105
               |||||||||||||||||||
Sbjct: 5754759 agcagctgatggagactct 5754777
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 79       gagggagcagcagctgatg 97
                |||||||||||||||||||
Sbjct: 12685274 gagggagcagcagctgatg 12685292
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 55       gcgtcagcggcaggagaacacgg 77
                ||||||||||||||||| |||||
Sbjct: 34448988 gcgtcagcggcaggagaccacgg 34449010
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>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    gagggagcagcagctgatg 97
             |||||||||||||||||||
Sbjct: 42964 gagggagcagcagctgatg 42982
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>gb|AF263462.1|AF263462 Homo sapiens cingulin mRNA, complete cds
          Length = 5142

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 82   ggagcagcagctgatggagactc 104
            |||||||||||||| ||||||||
Sbjct: 2377 ggagcagcagctgaaggagactc 2399
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>ref|XM_574737.1| PREDICTED: Rattus norvegicus similar to Protein C21orf58
           (LOC499419), mRNA
          Length = 973

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  gggagcagcagctgatgga 99
           |||||||||||||||||||
Sbjct: 351 gggagcagcagctgatgga 369
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 55     gcgtcagcggcaggagaacacgg 77
              ||||||||||||||||| |||||
Sbjct: 131332 gcgtcagcggcaggagaccacgg 131354
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 55    gcgtcagcggcaggagaacacgg 77
             ||||||||||||||||| |||||
Sbjct: 24707 gcgtcagcggcaggagaccacgg 24729
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>dbj|AK111414.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G01, full
           insert sequence
          Length = 1164

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 79  gagggagcagcagctgatg 97
           |||||||||||||||||||
Sbjct: 631 gagggagcagcagctgatg 649
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>gb|AC154011.3| Mus musculus 6 BAC RP24-261O15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 146781

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    agcagcagctgatggagac 102
             |||||||||||||||||||
Sbjct: 69293 agcagcagctgatggagac 69275
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>emb|CT033763.2| Medicago truncatula chromosome 5 clone mth2-139a2, COMPLETE SEQUENCE
          Length = 132108

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    atgggaaggaggaagatgc 51
             |||||||||||||||||||
Sbjct: 43782 atgggaaggaggaagatgc 43800
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>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191563

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     ggagcagcagctgatggag 100
              |||||||||||||||||||
Sbjct: 150270 ggagcagcagctgatggag 150288
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>emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-600F24 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181652

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   ggagcagcagctgatggag 100
            |||||||||||||||||||
Sbjct: 5227 ggagcagcagctgatggag 5245
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>dbj|AP001007.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-687M24, complete
              sequence
          Length = 203840

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     agggcttgttgatgggaag 40
              |||||||||||||||||||
Sbjct: 194135 agggcttgttgatgggaag 194153
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>dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-100P11, complete
             sequence
          Length = 176129

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    agggcttgttgatgggaag 40
             |||||||||||||||||||
Sbjct: 66274 agggcttgttgatgggaag 66292
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 87      agcagctgatggagactct 105
               |||||||||||||||||||
Sbjct: 5755946 agcagctgatggagactct 5755964
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>ref|NM_029816.1| Mus musculus RIKEN cDNA 2610028H24 gene (2610028H24Rik), mRNA
          Length = 1693

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  gggagcagcagctgatgga 99
           |||||||||||||||||||
Sbjct: 288 gggagcagcagctgatgga 306
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>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence
          Length = 236774

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    gggagcagcagctgatgga 99
             |||||||||||||||||||
Sbjct: 11850 gggagcagcagctgatgga 11868
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>gb|BC051454.1| Mus musculus RIKEN cDNA 2610028H24 gene, mRNA (cDNA clone MGC:56854
           IMAGE:6308081), complete cds
          Length = 1693

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  gggagcagcagctgatgga 99
           |||||||||||||||||||
Sbjct: 288 gggagcagcagctgatgga 306
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>dbj|AB037740.1| Homo sapiens mRNA for KIAA1319 protein, partial cds
          Length = 5073

 Score = 38.2 bits (19), Expect = 7.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 82   ggagcagcagctgatggagactc 104
            |||||||||||||| ||||||||
Sbjct: 2343 ggagcagcagctgaaggagactc 2365


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,182,079
Number of Sequences: 3902068
Number of extensions: 1182079
Number of successful extensions: 93289
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93058
Number of HSP's gapped (non-prelim): 231
length of query: 148
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 127
effective length of database: 17,151,101,840
effective search space: 2178189933680
effective search space used: 2178189933680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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