>gb|AF369907.1| Haemophilus influenzae biogroup aegyptius Iga1 protease type 2 (iga1)
            gene, complete cds
          Length = 5719

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 427  atgaatatgtccattttttaa 447
            |||||||||||||||||||||
Sbjct: 2950 atgaatatgtccattttttaa 2930

>emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in linkage group 1,
             complete sequence
          Length = 219280

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 519   ctgcaaatttgcctctagtct 539
             |||||||||||||||||||||
Sbjct: 72592 ctgcaaatttgcctctagtct 72612

>emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 in linkage group 5,
              complete sequence
          Length = 213232

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 388    taaatataaagactaaggcga 408
              |||||||||||||||||||||
Sbjct: 137229 taaatataaagactaaggcga 137249

>gb|BC031585.1| Homo sapiens hypothetical protein MGC35338, mRNA (cDNA clone
            MGC:35338 IMAGE:5180383), complete cds
          Length = 2292

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 416  tggacctatagatgaatatg 435
            ||||||||||||||||||||
Sbjct: 1752 tggacctatagatgaatatg 1771

>ref|XM_659271.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6759.2), mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  gctgaggaattgaaaggaac 82
           ||||||||||||||||||||
Sbjct: 412 gctgaggaattgaaaggaac 431

>emb|CR318659.26| Zebrafish DNA sequence from clone CH211-215M5 in linkage group 17,
              complete sequence
          Length = 167230

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    attttttaacacaatctcat 458
              ||||||||||||||||||||
Sbjct: 135205 attttttaacacaatctcat 135224

>emb|CR387922.7| Zebrafish DNA sequence from clone CH211-254C11 in linkage group 17,
             complete sequence
          Length = 36100

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   attttttaacacaatctcat 458
             ||||||||||||||||||||
Sbjct: 10669 attttttaacacaatctcat 10650

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    cctgggtctggcccagttcg 199
              ||||||||||||||||||||
Sbjct: 118991 cctgggtctggcccagttcg 118972

>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
             complete sequence
          Length = 143730

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   ttcatgtgctgcagctgcat 378
             ||||||||||||||||||||
Sbjct: 39695 ttcatgtgctgcagctgcat 39676

>emb|CR523956.1| Gallus gallus finished cDNA, clone ChEST690o5
          Length = 964

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 430 aatatgtccattttttaaca 449
           ||||||||||||||||||||
Sbjct: 833 aatatgtccattttttaaca 814

>emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in linkage group 1, complete
              sequence
          Length = 181272

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 380    gtaaatactaaatataaagactaa 403
              |||||||||||||||||| |||||
Sbjct: 140810 gtaaatactaaatataaatactaa 140787

>gb|DQ295238.1| Uncultured marine bacterium Ant4E12, partial genomic sequence
          Length = 43087

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   gcgttcatgtgctgcagctg 375
             ||||||||||||||||||||
Sbjct: 25849 gcgttcatgtgctgcagctg 25868

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    ttcatgtgctgcagctgcat 378
              ||||||||||||||||||||
Sbjct: 508727 ttcatgtgctgcagctgcat 508708

>gb|AC096719.3| Homo sapiens BAC clone RP11-14M23 from 4, complete sequence
          Length = 158398

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 19   ggaatctaagtctagggaatgtca 42
            ||||||||||| ||||||||||||
Sbjct: 8718 ggaatctaagtttagggaatgtca 8741

>gb|AC105053.3| Homo sapiens BAC clone RP11-688J22 from 2, complete sequence
          Length = 108768

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    caagctgaggaattgaaagg 79
             ||||||||||||||||||||
Sbjct: 13313 caagctgaggaattgaaagg 13294

>gb|AC068195.6| Homo sapiens BAC clone RP11-114B24 from 2, complete sequence
          Length = 178147

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   tagggcctggcccattcctg 221
             ||||||||||||||||||||
Sbjct: 48625 tagggcctggcccattcctg 48606

>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence
          Length = 169741

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    tggacctatagatgaatatg 435
              ||||||||||||||||||||
Sbjct: 113839 tggacctatagatgaatatg 113820

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 380     gtaaatactaaatataaaga 399
               ||||||||||||||||||||
Sbjct: 1724635 gtaaatactaaatataaaga 1724654

>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     tttaatagtactttcttaat 111
              ||||||||||||||||||||
Sbjct: 114071 tttaatagtactttcttaat 114090

>ref|NM_152389.2| Homo sapiens hypothetical protein DKFZp434O0527 (DKFZp434O0527),
            transcript variant 2, mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 416  tggacctatagatgaatatg 435
            ||||||||||||||||||||
Sbjct: 1750 tggacctatagatgaatatg 1769

>dbj|AB021765.1| Stemonidium hypomelas mitochondrial gene for 16S ribosomal RNA,
           partial sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  aaatttaatagtactttctt 108
           ||||||||||||||||||||
Sbjct: 834 aaatttaatagtactttctt 815


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,745,603
Number of Sequences: 3902068
Number of extensions: 4745603
Number of successful extensions: 85438
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85360
Number of HSP's gapped (non-prelim): 78
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)