ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20h21 |
|---|---|
| Clone Library Name | barley_pub |
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 36.2 bits (82), Expect = 0.070 Identities = 24/79 (30%), Positives = 32/79 (40%) Frame = +2 Query: 146 CPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLT 325 CP+C+E DAVL C+ H C + L+ S R+S SG Sbjct: 794 CPICLEALEDAVLTPCA----------------HRLCRECLLASWRNSTSG--------L 829 Query: 326 CPLCRGEVKGYTLVEPARE 382 CP+CR V L+ E Sbjct: 830 CPVCRNTVSKQELITAPTE 848
>IP23_LYCES (Q43502) Proteinase inhibitor type-2 CEVI57 precursor (Proteinase| inhibitor type II CEVI57) Length = 201 Score = 34.3 bits (77), Expect = 0.27 Identities = 38/147 (25%), Positives = 50/147 (34%), Gaps = 3/147 (2%) Frame = +2 Query: 86 VATQEPALAAMEKCAWKD-AICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLD 262 V+T E A A ++C ICP P + + C S KGC Y +F+ D Sbjct: 21 VSTVEHANACTKECGNLGYGICPGSEGSPENPICTNCCSGYKGCNYYYANGTFICEGTSD 80 Query: 263 QLIKSCRSSGSGDDPGSIVLTCPLCRGEVKGYTLVEPAREQLNRNRRTCM--QDGCSYSG 436 K+ S DP CP G+ T++ P TC GC Y G Sbjct: 81 P--KNPNICPSYCDPQIAYSKCPRSEGK----TIIYPT------GCTTCCTGYKGCYYFG 128 Query: 437 TYRELCRHARKKHPSAKPRAVDPLQTY 517 E P + DP Y Sbjct: 129 QDGEFVCEGESIEPKGCTKECDPRVAY 155
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 33.5 bits (75), Expect = 0.46 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Frame = +2 Query: 95 QEPALAAMEKCAWKDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIK 274 +E A E A KD CP+C E P A++ LC + C CL Q++ Sbjct: 189 EETKEAPKEYGAAKDYRCPICFEPPETALMTLCG------HVFCC-------PCLFQMVN 235 Query: 275 S---CRSSGSGDDPGSIVLTCPLCRGEV 349 S CR G C LCR +V Sbjct: 236 SSRTCRQFGH----------CALCRSKV 253
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = +2 Query: 104 ALAAMEKCAWKDAICPVCIECPH---DAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIK 274 A+ +++ W+ C VC C D+ +L+C + DKG H+ CL ++K Sbjct: 373 AVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKG----------YHTFCLQPVMK 422 Query: 275 SCRSSG 292 S ++G Sbjct: 423 SVPTNG 428
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = +2 Query: 104 ALAAMEKCAWKDAICPVCIECPH---DAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIK 274 A+ +++ W+ C VC C D+ +L+C + DKG H+ CL ++K Sbjct: 374 AVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKG----------YHTFCLQPVMK 423 Query: 275 SCRSSG 292 S ++G Sbjct: 424 SVPTNG 429
>CRDL2_MOUSE (Q8VEA6) Chordin-like protein 2 precursor| Length = 426 Score = 33.1 bits (74), Expect = 0.60 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Frame = +2 Query: 167 PHDAVLLLCSSHDKGCRPYVCGTSFLHSN---CLDQLIKSCRSSGSGDDPGSIVLT-CPL 334 P +L C + C C T + S + K C + DD ++ T CP Sbjct: 270 PMPCILCTCIDGYQDCHRVTCPTQYPCSQPKKVAGKCCKICPEDEAEDDHSEVISTRCPK 329 Query: 335 CRGEVKGYTLVEPAREQLNR 394 G+ YTL P+ + L+R Sbjct: 330 VPGQFHVYTLASPSPDSLHR 349
>IP21_TOBAC (Q40561) Proteinase inhibitor type-2 precursor (Proteinase| inhibitor type II) Length = 197 Score = 32.7 bits (73), Expect = 0.78 Identities = 34/137 (24%), Positives = 45/137 (32%), Gaps = 3/137 (2%) Frame = +2 Query: 104 ALAAMEKCA-WKDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSC 280 A A ++C + ICP P D + C + KGC Y +F+ D K+ Sbjct: 24 AKACTKECGNFAYGICPRSQGTPDDPICTTCCAGYKGCNYYSANGTFICEGSSDP--KNP 81 Query: 281 RSSGSGDDPGSIVLTCPLCRGEVKGYTLVEPAREQLNRNRRTCM--QDGCSYSGTYRELC 454 DP CP GE T++ P TC GC Y G E Sbjct: 82 NVCPQFCDPDIAYSKCPRSEGE----TIINPT------GCTTCCTGYKGCYYFGQDGEFV 131 Query: 455 RHARKKHPSAKPRAVDP 505 P + DP Sbjct: 132 CEGESDEPKSCTTECDP 148
>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor| Length = 515 Score = 32.7 bits (73), Expect = 0.78 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +2 Query: 188 LCSS--HDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRG 343 LCSS H K C Y + LH C ++ C + SG+D + P+C G Sbjct: 131 LCSSNYHGKRCNRYCIANAKLHWECSTHGVRRCSAGWSGEDCSN-----PICAG 179
>GATA5_CHICK (P43692) Transcription factor GATA-5 (GATA-binding factor 5)| Length = 391 Score = 32.7 bits (73), Expect = 0.78 Identities = 22/72 (30%), Positives = 29/72 (40%) Frame = -3 Query: 504 GSTARGFAEGCFFRACLQSSLYVPLYEQPSCMQVLLFLFSCSRAGSTSVYPLTSPRQSGH 325 G +A G F + S +YVP PS +Q L +L SC S P + SG Sbjct: 12 GQSAYSHDSGNFLHSSAGSPVYVPTTRVPSVLQTLPYLQSCEPHQSHLGNPPGWAQSSGE 71 Query: 324 VSTIEPGSSPLP 289 + GS P Sbjct: 72 TTAFNAGSPHPP 83
>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)| Length = 1972 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +2 Query: 128 AWKDAI----CPVCIECPHDAVLLLCSSHDKGCRPY 223 AW+ +I C +C + ++ +LLLC DKGC Y Sbjct: 1728 AWEKSIMKVYCQICRKGDNEELLLLCDGCDKGCHTY 1763
>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B (Extracellular| matrix protein F22) Length = 2130 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +2 Query: 128 AWKDAI----CPVCIECPHDAVLLLCSSHDKGCRPY 223 AW+ +I C +C + ++ +LLLC DKGC Y Sbjct: 1888 AWEKSIMKVYCQICRKGDNEELLLLCDGCDKGCHTY 1923
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 32.0 bits (71), Expect = 1.3 Identities = 22/83 (26%), Positives = 32/83 (38%) Frame = +2 Query: 146 CPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLT 325 CP+C+E D VL C+ H C + L+ S RS G Sbjct: 1040 CPICLESADDPVLTPCA----------------HRMCRECLLTSWRSPSCG--------L 1075 Query: 326 CPLCRGEVKGYTLVEPAREQLNR 394 CP+CR +K L+ + + R Sbjct: 1076 CPICRTILKRTELISCPTDSIFR 1098
>ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2| Length = 631 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/68 (36%), Positives = 36/68 (52%) Frame = +2 Query: 143 ICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVL 322 ICP+C E VLL CR + CG + +H C+ +++ + + +GS S VL Sbjct: 146 ICPICQE-----VLLEKKLPVTFCR-FGCGNN-VHIKCM-RILANYQDTGSD----SSVL 193 Query: 323 TCPLCRGE 346 CPLCR E Sbjct: 194 RCPLCREE 201
>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)| Length = 837 Score = 31.2 bits (69), Expect = 2.3 Identities = 24/93 (25%), Positives = 35/93 (37%) Frame = +2 Query: 68 HCSFKRVATQEPALAAMEKCAWKDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLH 247 HC K + T+ PA+ + PVC L+ S C P+V + Sbjct: 322 HCPHKGLTTKRPAITTPGPFPENCTVSPVC--------QLIMDSLFSQCHPFVPPKHYYE 373 Query: 248 SNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGE 346 + D SC +GSG + S+ LC E Sbjct: 374 ACLFD----SCFVAGSGMECASVQAYAALCAQE 402
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +2 Query: 146 CPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLT 325 CP+C+E D +LL C+ L +C +++ S SSG +P Sbjct: 10 CPICLELFEDPLLLPCAHS-------------LCFSCAHRILVSSCSSGESIEP-ITAFQ 55 Query: 326 CPLCR 340 CP CR Sbjct: 56 CPTCR 60
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +2 Query: 146 CPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLT 325 CP+C+E D +LL C+ L +C +++ S SSG +P Sbjct: 10 CPICLELFEDPLLLPCAHS-------------LCFSCAHRILVSSCSSGESIEP-ITAFQ 55 Query: 326 CPLCR 340 CP CR Sbjct: 56 CPTCR 60
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +2 Query: 89 ATQEPALAAMEKCAWKDAICPVCIECP---HDAVLLLCSSHDKG 211 A + AL A ++ W+ C VC C +D+ +L+C + DKG Sbjct: 254 ACLDTALTARKRAGWQCPECKVCQACRKPGNDSKMLVCETCDKG 297
>TRI54_BOVIN (Q58D15) Tripartite motif protein 54| Length = 366 Score = 30.8 bits (68), Expect = 3.0 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K ICP+C+E V++L H+ CR F SN L Q S S G Sbjct: 22 KQLICPICLEMFSKPVVILPCQHNL-CRK-CANDVFQASNPLWQSRSSTTVSSGGR---- 75 Query: 314 IVLTCPLCRGEV 349 CP CR EV Sbjct: 76 --FRCPSCRHEV 85
>ATL5I_ARATH (Q9FL07) RING-H2 finger protein ATL5I| Length = 376 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Frame = +2 Query: 167 PHDAVLLLC--SSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCR 340 P D + LC S DK +C +F H NC+D ++S TCPLCR Sbjct: 140 PFDCAVCLCEFSEKDKLRLLPMCSHAF-HLNCIDTWLQSNS-------------TCPLCR 185 Query: 341 GEV--KGYTLVEP 373 G + G+++ P Sbjct: 186 GTLFSPGFSMENP 198
>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) Length = 1850 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +2 Query: 128 AWKDAI----CPVCIECPHDAVLLLCSSHDKGCRPY 223 AW+ ++ C VC + +D LLLC D+GC Y Sbjct: 1616 AWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIY 1651
>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3) Length = 1878 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +2 Query: 128 AWKDAI----CPVCIECPHDAVLLLCSSHDKGCRPY 223 AW+ ++ C VC + +D LLLC D+GC Y Sbjct: 1642 AWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIY 1677
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 30.4 bits (67), Expect = 3.9 Identities = 28/113 (24%), Positives = 42/113 (37%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K+ CP+C+E + + L CG SF + C+ IK G+ Sbjct: 11 KEVTCPICLELLTEPLSL------------DCGHSFCQA-CITAKIKESVIISRGES--- 54 Query: 314 IVLTCPLCRGEVKGYTLVEPAREQLNRNRRTCMQDGCSYSGTYRELCRHARKK 472 +CP+C+ + L P R N R G R++C H KK Sbjct: 55 ---SCPVCQTRFQPGNL-RPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKK 103
>TRI54_PONPY (Q5REJ9) Tripartite motif protein 54| Length = 358 Score = 30.0 bits (66), Expect = 5.0 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K ICP+C+E V++L H+ CR F SN L Q S S G Sbjct: 22 KQLICPICLEMFSKPVVILPCQHNL-CRK-CANDVFQASNPLWQSRGSTTVSSGGR---- 75 Query: 314 IVLTCPLCRGEV 349 CP CR EV Sbjct: 76 --FRCPSCRHEV 85
>TRI54_HUMAN (Q9BYV2) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 358 Score = 30.0 bits (66), Expect = 5.0 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K ICP+C+E V++L H+ CR F SN L Q S S G Sbjct: 22 KQLICPICLEMFSKPVVILPCQHNL-CRK-CANDVFQASNPLWQSRGSTTVSSGGR---- 75 Query: 314 IVLTCPLCRGEV 349 CP CR EV Sbjct: 76 --FRCPSCRHEV 85
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 30.0 bits (66), Expect = 5.0 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%) Frame = +2 Query: 116 MEKCAWKDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGS 295 ++K ++ +CP+C E +AV C CR CL Q ++ +SG Sbjct: 4 LQKDNQEEGVCPICQESLKEAVSTNCG--HLFCRV-----------CLTQHVEKASASG- 49 Query: 296 GDDPGSIVLTCPLCR----GEVKGYTLVEPAREQLNRNRRTC 409 V CPLCR EV G + P N +R C Sbjct: 50 -------VFCCPLCRKPCSEEVLGTGYICP-----NHQKRVC 79
>TRI54_RAT (Q5XIH6) Tripartite motif protein 54 (RING finger protein 30)| Length = 364 Score = 30.0 bits (66), Expect = 5.0 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K ICP+C+E V++L H+ CR F SN L Q S S G Sbjct: 22 KQLICPICLEMFSKPVVILPCQHNL-CRK-CANDVFQASNPLWQSRGSTTVSSGGR---- 75 Query: 314 IVLTCPLCRGEV 349 CP CR EV Sbjct: 76 --FRCPSCRHEV 85
>TRI54_MOUSE (Q9ERP3) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 366 Score = 30.0 bits (66), Expect = 5.0 Identities = 25/72 (34%), Positives = 30/72 (41%) Frame = +2 Query: 134 KDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGS 313 K ICP+C+E V++L H+ CR F SN L Q S S G Sbjct: 22 KQLICPICLEMFSKPVVILPCQHNL-CRK-CANDVFQASNPLWQSRGSTTVSSGGR---- 75 Query: 314 IVLTCPLCRGEV 349 CP CR EV Sbjct: 76 --FRCPSCRHEV 85
>KRF4_COLLI (Q9PSV3) Feather keratin Cos2-3 (F-ker)| Length = 100 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 212 CRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCP 331 C+P CG + L ++C + ++ C+SS +P S+V+ P Sbjct: 9 CQP--CGPTPLANSCNEPCVRQCQSSNVVIEPSSVVVILP 46
>KRF2_COLLI (O93499) Feather keratin Cos1-2 (F-ker)| Length = 100 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 212 CRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCP 331 C+P CG + L ++C + ++ C+SS P +V+T P Sbjct: 9 CQP--CGPTPLANSCNEPCVRQCQSSTIAIQPSPVVVTLP 46
>KRF3_COLLI (O93500) Feather keratin Cos2-2 (F-ker)| Length = 100 Score = 29.6 bits (65), Expect = 6.6 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 212 CRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCP 331 C+P CG + L ++C + ++ C+SS +P S+V+ P Sbjct: 9 CQP--CGPTPLANSCNEPCVRQCQSSSVIIEPSSVVVILP 46
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 29.6 bits (65), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 388 ICAENDKDVKIEPCG----HLMCTSCLTSWQESDGQG---------CPFCRCEIKG 430
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 29.6 bits (65), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 386 ICAENDKDVKIEPCG----HLMCTSCLTSWQESDGQG---------CPFCRCEIKG 428
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 29.6 bits (65), Expect = 6.6 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Frame = +2 Query: 224 VCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKGYTLVEPAREQLNRNRR 403 +C S + N L++ + S S S CP+CR E + L + +E L + Sbjct: 223 LCHYSAVERNALNRHMASMHEDISNFY--SDTYACPVCREE---FRLSQALKEHLKSHTA 277 Query: 404 T---------CMQDGCSYSGTYRE-LCRHARKKH 475 C Q+GCSY+ R+ +H ++ H Sbjct: 278 AAAAEPLPLRCFQEGCSYAAPDRKAFIKHLKETH 311
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 29.6 bits (65), Expect = 6.6 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Frame = +2 Query: 116 MEKCAWKDAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGS 295 ++K ++ +CP+C E +AV C CR CL Q ++ +SG Sbjct: 4 LQKDNQEEGVCPICQESLKEAVSTNCG--HLFCRV-----------CLTQHVEKASASG- 49 Query: 296 GDDPGSIVLTCPLCR---GEVKGYTLVEPAREQLNRNRRTC 409 + CPLCR EV G + P N +R C Sbjct: 50 ------VFCCCPLCRKPSEEVLGTGYICP-----NHQKRVC 79
>QUEA_NITWN (Q3SRN4) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 360 Score = 29.6 bits (65), Expect = 6.6 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 375 AGSTSVYPLTSPRQSGHVSTIEPGSSPLPELLHDLISWSR 256 AGS ++ P SPR S + ++PGS + + DL W R Sbjct: 12 AGSIALRP-ASPRDSARMLVVQPGSGVRDQQVSDLPEWLR 50
>TCF8_RAT (Q62947) Transcription factor 8 (Zinc finger homeodomain| enhancer-binding protein) (Zfhep) Length = 1109 Score = 29.6 bits (65), Expect = 6.6 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%) Frame = +2 Query: 260 DQLIKSCRSSGSGD----DPGSIVLTCPLC-RGEVKGYTLVEPAREQLNRNRRTCMQDGC 424 DQ + +SG D D S +LTCP C RG + +L E + + +N C Sbjct: 126 DQRQGTPEASGHDDNGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNFSCSLC 185 Query: 425 SYSGTYRELCRHARKKHPSAK 487 SY+ YR H S + Sbjct: 186 SYTFAYRTQLERHMTSHKSGR 206
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 29.6 bits (65), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 381 ICAENDKDVKIEPCG----HLMCTSCLTSWQESEGQG---------CPFCRCEIKG 423
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 29.6 bits (65), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 383 ICAENDKDVKIEPCG----HLMCTSCLTSWQESEGQG---------CPFCRCEIKG 425
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 29.6 bits (65), Expect = 6.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 386 ICAENDKDVKIEPCG----HLMCTSCLTSWQESDGQG---------CPFCRCEIKG 428
>EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Contains:| Epidermal growth factor] Length = 1214 Score = 29.3 bits (64), Expect = 8.6 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 275 SCRSSGSGDDPGSIVLTCPLCRGEVKGYTLVEPAREQLNRNRRTCMQDGCS 427 +CR S G +P S V TC +GYTL + R+ + N GC+ Sbjct: 324 NCRGSMCGQEPKSHVCTC------AEGYTLSQDGRKCEDVNECAFWNHGCT 368
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 29.3 bits (64), Expect = 8.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 375 ICAENDKDVKIEPCG----HLMCTSCLTAWQESDGQG---------CPFCRCEIKG 417
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 29.3 bits (64), Expect = 8.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 375 ICAENDKDVKIEPCG----HLMCTSCLTAWQESDGQG---------CPFCRCEIKG 417
>MT2_CANGA (P15114) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| [Contains: Metallothionein-2' (MT-2') (Metallothionein-II') (MT-II')] Length = 51 Score = 29.3 bits (64), Expect = 8.6 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 452 RVLCTYRCMSSHLACRSSCFCLAAP 378 +V C Y C S+ AC ++C C A P Sbjct: 3 QVNCQYDCHCSNCACENTCNCCAKP 27
>DNAJ_HALMA (Q5UXH9) Chaperone protein dnaJ| Length = 384 Score = 29.3 bits (64), Expect = 8.6 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +2 Query: 290 GSGDDPGSIVLTCPLCRGEVKGYTLVEPAREQLNRNRRTCMQDGCSYSGT-YRELCRHAR 466 G+G PG+ TCP C G+ + T V+ + R TC + C GT Y E C R Sbjct: 163 GAGHPPGADSETCPECNGQGQ-TTQVQQTPMGRVQQRTTCRR--CDGEGTLYDETCSTCR 219
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 29.3 bits (64), Expect = 8.6 Identities = 20/66 (30%), Positives = 26/66 (39%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKGYTLV 367 +C+ DK R CG L+ SC + D TCP CR E+KG V Sbjct: 352 ICAERDKDVRIEPCG----------HLLCSCCLAAWQDSDSQ---TCPFCRCEIKGREAV 398 Query: 368 EPAREQ 385 + Q Sbjct: 399 SICQAQ 404
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 29.3 bits (64), Expect = 8.6 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +2 Query: 188 LCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSIVLTCPLCRGEVKG 355 +C+ +DK + CG H C L S G G CP CR E+KG Sbjct: 375 ICAENDKDVKIEPCG----HLMCTSCLTAWQESDGQG---------CPFCRCEIKG 417
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 29.3 bits (64), Expect = 8.6 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 3/130 (2%) Frame = +2 Query: 137 DAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSI 316 D C +C++ V+ C+ C+P +C Q+I S + P + Sbjct: 751 DEECAICLDSLTFPVITHCAH--VFCKPCIC-----------QVIHS-------EQPHA- 789 Query: 317 VLTCPLCRGEVKGYTLVEPAREQL--NRNRRTCMQ-DGCSYSGTYRELCRHARKKHPSAK 487 CPLCR E+ G L+E E+L + ++ + M+ S R K P+ K Sbjct: 790 --KCPLCRNEIHGDNLLECPPEELACDSDKESSMEWKSSSKINALMHALIELRTKDPNIK 847 Query: 488 PRAVDPLQTY 517 V T+ Sbjct: 848 SLVVSQFTTF 857
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 29.3 bits (64), Expect = 8.6 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%) Frame = +2 Query: 137 DAICPVCIECPHDAVLLLCSSHDKGCRPYVCGTSFLHSNCLDQLIKSCRSSGSGDDPGSI 316 D C +C++ V+ C+ C+P +C Q+I++ + P + Sbjct: 757 DEECAICLDSLTVPVITHCAH--VFCKPCIC-----------QVIQN-------EQPHA- 795 Query: 317 VLTCPLCRGEVKGYTLVEPAREQLNRN--RRTCMQ-DGCSYSGTYRELCRHARKKHPSAK 487 CPLCR ++ L+E E+L R+ +++ M+ S RKK+P+ K Sbjct: 796 --KCPLCRNDIHEDNLLECPPEELARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIK 853 Query: 488 PRAVDPLQTY 517 V T+ Sbjct: 854 SLVVSQFTTF 863 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,850,361 Number of Sequences: 219361 Number of extensions: 1909819 Number of successful extensions: 5902 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 5552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5892 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
