ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20h17 |
|---|---|
| Clone Library Name | barley_pub |
>PRP2_RAT (P10164) Acidic proline-rich protein PRP25 precursor (Fragment)| Length = 172 Score = 34.3 bits (77), Expect = 0.29 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -1 Query: 369 PSATPALGKLRTPPSRGGCRCKERMPGRPMIPGSRHEPQTKSP 241 P PA G + PP +GG + PG+P P + PQ K P Sbjct: 40 PPRPPANGSQQGPPPQGGPQQSPLQPGKPQDPPPQGSPQQKPP 82 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Frame = -1 Query: 495 PAASSPIVQEEPCHKPLL*YRPCSGTPWS*GTCSSREGTWPC--PSATPAL-GKLRTPPS 325 P I+ + P KP P G P S++G P P +P GK + PP Sbjct: 19 PGDELQILDQTPNQKP-----PPPGFPPRPPANGSQQGPPPQGGPQQSPLQPGKPQDPPP 73 Query: 324 RGGCRCKERMPGRPMIPGSRHEPQTKSP 241 +G + K PG+P P PQ K P Sbjct: 74 QGSPQQKPPQPGKPQGPPPPGGPQKKPP 101 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -1 Query: 357 PALGKLRTPPSRGGCRCKERMPGRPMIPGSRHEPQTKSP 241 P GK + PP GG + K PG+P P PQ K P Sbjct: 101 PQPGKPQGPPPPGGPQKKPPQPGKPQGPTPPGGPQQKPP 139 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -1 Query: 357 PALGKLRTPPSRGGCRCKERMPGRPMIPGSRHEPQTKSP 241 P GK + PP GG + K PG+P P PQ K P Sbjct: 82 PQPGKPQGPPPPGGPQKKPPQPGKPQGPPPPGGPQKKPP 120
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 33.9 bits (76), Expect = 0.37 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 23/108 (21%) Frame = -1 Query: 510 RGTRAPAASSPIVQEEPCHKPLL*-----------YRPCSGTPWS*GTCSSREGTWPCP- 367 R +AP+ASS Q P H+P RPC+ +P S S E PCP Sbjct: 171 RFLQAPSASS---QCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESDAESLSPCPP 227 Query: 366 ----SATPALGKLRT---PPSRGGCRCKERMPGRPM----IPGSRHEP 256 S +P+LG + P +R +P RP +P SR +P Sbjct: 228 QRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQP 275
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 33.1 bits (74), Expect = 0.64 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 23/108 (21%) Frame = -1 Query: 510 RGTRAPAASSPIVQEEPCHKPLL*-----------YRPCSGTPWS*GTCSSREGTWPCP- 367 R +AP+ASS Q P H+P RPC+ +P S S E PCP Sbjct: 171 RFLQAPSASS---QCAPAHRPYSPPFFSLALAQDSSRPCATSPQSGSWESDAESLSPCPP 227 Query: 366 ----SATPALGKLRT---PPSRGGCRCKERMPGRPM----IPGSRHEP 256 S +P+LG + P +R +P RP +P SR +P Sbjct: 228 QRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQP 275
>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)| Length = 1285 Score = 32.7 bits (73), Expect = 0.83 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 10/87 (11%) Frame = -1 Query: 516 GCRGTRAPAASSPIVQEEPCHKPLL*YRPCSGTPWS*GTCSSREGTWPCPSATPALGKLR 337 GCRG A SP + + C + G W C + PC SA A G+ Sbjct: 1053 GCRGAPV-CAPSPCLHDGACRDLFDAFACACGPGWEGPRCEAHVD--PCHSAPCARGRCH 1109 Query: 336 T----------PPSRGGCRCKERMPGR 286 T PP GG RC+ +P + Sbjct: 1110 THPDGRFECRCPPGFGGPRCRLPVPSK 1136
>GAT1B_XENLA (P23768) GATA-binding factor 1-B (Transcription factor xGATA-1B)| Length = 364 Score = 32.7 bits (73), Expect = 0.83 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 483 SPIVQEEPCHKPLL*YRPCSGTPWS*GTCSSREGTWPC-PSATPALGKLRTPP 328 SP++Q P H P +G P S T GT P PSA ALG + +PP Sbjct: 57 SPVLQTFPLHWP----ETSAGIPQSLTTYGRSPGTLPLYPSAASALGSITSPP 105
>MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alpha-glucosidase)| Length = 605 Score = 31.6 bits (70), Expect = 1.8 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +3 Query: 243 DSWSEARDGSPGSWDVLASVPCIDNHLEKVVFEVYRGQE 359 D +S + DG+ W AS+P +D E +V E+YRG++ Sbjct: 280 DWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGED 318
>FA53C_MOUSE (Q8BXQ8) Protein FAM53C| Length = 393 Score = 31.6 bits (70), Expect = 1.8 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 23/108 (21%) Frame = -1 Query: 510 RGTRAPAASSPIVQEEPCHKPLL*-----------YRPCSGTPWS*GTCSSREGTWPCP- 367 R +AP+ASS Q P H+P +PC+ +P S S E PCP Sbjct: 171 RFLQAPSASS---QCAPAHRPYSPPFFSLALAQDSAQPCATSPQSGSWESDAESLSPCPP 227 Query: 366 ----SATPALGKLRT---PPSRGGCRCKERMPGRPM----IPGSRHEP 256 S +P+LG + P +R +P RP +P SR +P Sbjct: 228 QRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQP 275
>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7| Length = 1303 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -1 Query: 390 REGTWPCPSATPALGKLRTPPSRGGCRCKERMPGRPMIPGSRHEPQTKSP 241 ++G P P P +G L TPP G + GRPM G P P Sbjct: 501 KQGINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPP 550
>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| [Contains: Transforming protein Int-3; Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 1964 Score = 31.2 bits (69), Expect = 2.4 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 167 DMPLRCVPQLDGYCPEAWHNG 105 ++PL C+P D YC + +HNG Sbjct: 1242 EIPLTCIPAYDQYCRDHFHNG 1262
>LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1192 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Frame = +2 Query: 296 IRSLHRQPPREGGVRSLPRAGVAEGHGQVPSREEQVPQDHGVPLHGRYYKRGLWQGSS*T 475 I L +PP RSLP + + + Q P+ P D GR KRG W G+ Sbjct: 494 IDQLRGRPPSYS--RSLPGSALELRYSQAPTLPSGAPLDPYGAGSGRAGKRGRWSGAKDE 551 Query: 476 MGEE-----AAGALVPRQPG 520 ++ AG++ P PG Sbjct: 552 SSKDWDRSTPAGSIPPPFPG 571
>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1043 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Frame = +2 Query: 296 IRSLHRQPPREGGVRSLPRAGVAEGHGQVPSREEQVPQDHGVPLHGRYYKRGLWQGSS*T 475 I L +PP RSLP + + + Q P+ P D GR KRG W G+ Sbjct: 343 IDQLRGRPPSSYS-RSLPGSALELRYSQAPTLPSGAPLDPYGAGSGRAGKRGRWSGAKDE 401 Query: 476 MGEE-----AAGALVPRQPG 520 ++ AG++ P PG Sbjct: 402 SSKDWDRSAPAGSIPPPFPG 421
>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7| homolog Length = 1304 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = -1 Query: 390 REGTWPCPSATPALGKLRTPPSRGGCRCKERMPGRPMIPGSRHEPQTKSP 241 ++G P P P +G L TPP G GRPM G P P Sbjct: 500 KQGINPLPKPPPGVGLLPTPPRPPGPPAPTSPNGRPMQGGPPPPPPPPPP 549
>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich| proteoglycan 1) Length = 206 Score = 30.0 bits (66), Expect = 5.4 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 10/123 (8%) Frame = -1 Query: 591 RHGRYHDG*PRA--------DS*RRGNEHLWRPGCRGTRAPAASSPIVQEEPCHKPLL*Y 436 +HG++H P A DS ++ G R R P + P H Sbjct: 41 KHGQHHQKPPPASDENGDGDDSDDGDDDGSGDDGNRPERPPPHGGNHQRPPPGHHH---G 97 Query: 435 RPCSGTPWS*GTCSSREGTWPC--PSATPALGKLRTPPSRGGCRCKERMPGRPMIPGSRH 262 P SG P + + +G P P P G + PP +GG + + PG+P P + Sbjct: 98 PPPSGGPQTSSQPGNPQGPPPQGGPQGPPQPGNPQGPPPQGGPQQRPPQPGKPQGPPPQG 157 Query: 261 EPQ 253 PQ Sbjct: 158 GPQ 160
>ABC3G_LAGLA (Q694B8) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 381 Score = 30.0 bits (66), Expect = 5.4 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%) Frame = +3 Query: 138 ELRHTPEGHVNKHYINWFMQLLKVFPCLETIYIKSDSWSEARDGSPGSWDVLASVPCIDN 317 ++ PE H ++++WF L + C + SW+ + LA P + Sbjct: 59 QVSFNPEHHAEMYFLSWFRGNL-LPACKRSQITWFVSWNPCLYCVAKVAEFLAEHPKVTL 117 Query: 318 HLEKVVFEVYRGQEWQRDMAKFLHGRSRFLKTMEF----HCMDDTTREVYGRAPPEQW 479 + YR ++W+R + K +R +K M++ HC D+ R P E W Sbjct: 118 TVSTARLYCYRKKDWRRALRKLSQTGAR-VKIMDYEEFQHCWDNFVDN--QREPFEPW 172
>ILVD_THET8 (Q5SIY0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 555 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Frame = +2 Query: 107 HYAKPQD--------NSRRAEAHTGGACQQTLHQLVYAAAQGVPLLGDDLHQV 241 H KP+D N+ A A TGG+ LH L A GV L DD Q+ Sbjct: 241 HDWKPKDFLTRKSFLNAIAAVAATGGSTNAVLHLLALAKEAGVELSLDDFDQI 293
>ILVD_THET2 (Q72JA8) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 555 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Frame = +2 Query: 107 HYAKPQD--------NSRRAEAHTGGACQQTLHQLVYAAAQGVPLLGDDLHQV 241 H KP+D N+ A A TGG+ LH L A GV L DD Q+ Sbjct: 241 HDWKPKDFLTRKSFLNAVAAVAATGGSTNAVLHLLALAKEAGVELSLDDFDQI 293
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Frame = -1 Query: 384 GTWPCPSATPALGKLRTPPSRGGCRCKERMPGRP---MIPGSRHEPQTKSPT*CRSSPSK 214 G PC ++P + R P G CRC+ G PG H P + C SP+ Sbjct: 537 GCQPCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQL---CGCSPAG 593 Query: 213 GTP 205 P Sbjct: 594 TLP 596
>DGTL1_BORPE (Q7VT92) Deoxyguanosinetriphosphate triphosphohydrolase-like| protein Length = 384 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Frame = +3 Query: 9 KLEFLGYLGMNNEIEFGNTKFTNFRKMNIHAETIMPSLRT---------IAVELRHTPEG 161 +LE+ + +N+E + T+ T+ ++ A T+ SLR +A +L HTP G Sbjct: 54 RLEYKTQVFVNHEGDLFRTRLTHSLEVAQIARTLARSLRVSEDLTEAIALAHDLGHTPFG 113 Query: 162 HVNKHYINWFMQLL 203 H + +N M+ L Sbjct: 114 HAGQDELNACMREL 127
>DGTL1_BORPA (Q7W2B5) Deoxyguanosinetriphosphate triphosphohydrolase-like| protein Length = 384 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Frame = +3 Query: 9 KLEFLGYLGMNNEIEFGNTKFTNFRKMNIHAETIMPSLRT---------IAVELRHTPEG 161 +LE+ + +N+E + T+ T+ ++ A T+ SLR +A +L HTP G Sbjct: 54 RLEYKTQVFVNHEGDLFRTRLTHSLEVAQIARTLARSLRVSEDLTEAIALAHDLGHTPFG 113 Query: 162 HVNKHYINWFMQLL 203 H + +N M+ L Sbjct: 114 HAGQDELNACMREL 127
>DGTL1_BORBR (Q7WR83) Deoxyguanosinetriphosphate triphosphohydrolase-like| protein Length = 384 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 9/74 (12%) Frame = +3 Query: 9 KLEFLGYLGMNNEIEFGNTKFTNFRKMNIHAETIMPSLRT---------IAVELRHTPEG 161 +LE+ + +N+E + T+ T+ ++ A T+ SLR +A +L HTP G Sbjct: 54 RLEYKTQVFVNHEGDLFRTRLTHSLEVAQIARTLARSLRVSEDLTEAIALAHDLGHTPFG 113 Query: 162 HVNKHYINWFMQLL 203 H + +N M+ L Sbjct: 114 HAGQDELNACMREL 127
>ILVD_TROWT (Q83GP9) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 569 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 155 GGACQQTLHQLVYAAAQGVPLLGDDLHQVGLLV*GS*RLPGIMG-RPGIRSLHRQPPREG 331 GG+ LH L A VPL DD +++G R+P I +P R + R G Sbjct: 285 GGSTNAVLHLLAIAHEAHVPLTIDDFNKIGN------RVPHIADLKPFGRYVMNDVDRVG 338 Query: 332 GVRSLPRAGVAEG--HGQV 382 G+ + A + EG HG V Sbjct: 339 GIPVVINALMREGFIHGDV 357
>ILVD_TROW8 (Q83HI6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 569 Score = 29.6 bits (65), Expect = 7.0 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 155 GGACQQTLHQLVYAAAQGVPLLGDDLHQVGLLV*GS*RLPGIMG-RPGIRSLHRQPPREG 331 GG+ LH L A VPL DD +++G R+P I +P R + R G Sbjct: 285 GGSTNAVLHLLAIAHEAHVPLTIDDFNKIGN------RVPHIADLKPFGRYVMNDVDRVG 338 Query: 332 GVRSLPRAGVAEG--HGQV 382 G+ + A + EG HG V Sbjct: 339 GIPVVINALMREGFIHGDV 357
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 29.6 bits (65), Expect = 7.0 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Frame = -1 Query: 498 APAASSP-IVQEEPCHKPLL*YRPCSGTPWS*GTCSSREGTWPCPSATPALGKLRTPP-- 328 APA P ++ ++ H + P SG PW C P PS T + ++ Sbjct: 266 APAQPPPGVINDQQLH-----HLP-SGPPWWPPICDP-----PQPSKTQGQSRGQSRGRG 314 Query: 327 -----SRGGCRCKERMPGRPMIPGSRHEPQTKSPT*CRSSPSKG 211 RG R K+R PG P P EP T SP+ SP G Sbjct: 315 RGRGRGRGKSRDKQRKPGGPWRP----EPNTSSPSMPELSPVLG 354
>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor| Length = 648 Score = 29.6 bits (65), Expect = 7.0 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Frame = +2 Query: 314 QPPREGGVRSLPRAGVAEGHGQVPSREEQVPQDHGVPLHGRYYKRGL---WQGSS*TMGE 484 Q + G + P G G GQ P +E+Q Q YY L QG G+ Sbjct: 381 QQTGQPGQKQQPGQGQQTGQGQQPEQEQQPGQG-----QQGYYPTSLQQPGQGQQQGQGQ 435 Query: 485 EAAGALVPRQPGR-QRCSFPL-LQESARGQP 571 + +QPG+ Q+ +P LQ+ +GQP Sbjct: 436 QGYYPTSLQQPGQGQQGHYPASLQQPGQGQP 466
>EDD_PSEAE (P31961) Phosphogluconate dehydratase (EC 4.2.1.12)| (6-phosphogluconate dehydratase) Length = 608 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 128 NSRRAEAHTGGACQQTLHQLVYAAAQGVPLLGDDLHQVGLLV 253 NS A TGG+ TLH L A A G+ L D+ ++ +V Sbjct: 289 NSVVALLATGGSTNHTLHLLAIAQAAGIQLTWQDMSELSHVV 330
>TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA topoisomerase| IIbeta-binding protein 1) (TopBP1) Length = 1515 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 479 PLFRRSPAINLSCSIVHAVELHGLEEPAPPVKELGHVPLPLLPSV 345 P++ A SC + A G EEP PPV E +P P P+V Sbjct: 1190 PVYHSEIAEQASC-VTQAPGHPGSEEPEPPVAERPLIPEPQAPAV 1233
>RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36| Length = 104 Score = 29.3 bits (64), Expect = 9.2 Identities = 24/75 (32%), Positives = 36/75 (48%) Frame = +3 Query: 348 RGQEWQRDMAKFLHGRSRFLKTMEFHCMDDTTREVYGRAPPEQWVRKQQELLCLDSRAAR 527 +G + ++++K H R R T + D REV G AP E R+ ELL + ++ Sbjct: 12 KGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYE---RRAMELL----KVSK 64 Query: 528 DARFLFFKSQLVVNH 572 D R L F + V H Sbjct: 65 DKRALKFIKKRVGTH 79
>RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36| Length = 104 Score = 29.3 bits (64), Expect = 9.2 Identities = 24/75 (32%), Positives = 36/75 (48%) Frame = +3 Query: 348 RGQEWQRDMAKFLHGRSRFLKTMEFHCMDDTTREVYGRAPPEQWVRKQQELLCLDSRAAR 527 +G + ++++K H R R T + D REV G AP E R+ ELL + ++ Sbjct: 12 KGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYE---RRAMELL----KVSK 64 Query: 528 DARFLFFKSQLVVNH 572 D R L F + V H Sbjct: 65 DKRALKFIKKRVGTH 79
>S27A1_MOUSE (Q60714) Long-chain fatty acid transport protein 1 (EC 6.2.1.-)| (Fatty acid transport protein 1) (FATP-1) (Solute carrier family 27 member 1) Length = 646 Score = 29.3 bits (64), Expect = 9.2 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +2 Query: 299 RSLHRQPPREGGVRSLPRAGVAEGHGQVPSREEQVPQDHGVPLHGRYY 442 R L RQP R+ V R +A G+G P+ E+ Q GVP G +Y Sbjct: 342 RYLLRQPVRD--VEQRHRVRLAVGNGLRPAIWEEFTQRFGVPQIGEFY 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,130,501 Number of Sequences: 219361 Number of extensions: 2227095 Number of successful extensions: 7635 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7620 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
