ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476192.1| Oryza sativa (japonica cultivar-group), predic... 339 5e-90
2dbj|AK109456.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 5e-90
3gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome... 220 3e-54
4gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome... 220 3e-54
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
6ref|NM_114655.3| Arabidopsis thaliana unknown protein AT3G47850 ... 46 0.11
7emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in l... 46 0.11
8gb|AY116964.1| Arabidopsis thaliana AT3g47850/T23J7_180 mRNA, co... 46 0.11
9ref|XM_685788.1| PREDICTED: Danio rerio similar to phosphorylase... 46 0.11
10gb|AF428310.1|AF428310 Arabidopsis thaliana AT3g47850/T23J7_180 ... 46 0.11
11emb|BX822580.1|CNS0A765 Arabidopsis thaliana Full-length cDNA Co... 46 0.11
12emb|BX825399.1|CNS0A6EB Arabidopsis thaliana Full-length cDNA Co... 46 0.11
13emb|BX842231.1|CNS09YEF Arabidopsis thaliana Full-length cDNA Co... 46 0.11
14gb|AY086386.1| Arabidopsis thaliana clone 2485 mRNA, complete se... 46 0.11
15gb|AC117475.2| Homo sapiens 3 BAC RP11-742C10 (Roswell Park Canc... 44 0.44
16gb|AF056724.1|HSSLC21A06 Homo sapiens prostaglandin transporter ... 44 0.44
17gb|AC163696.3| Ornithorhynchus anatinus BAC clone OABb-153I22 fr... 44 0.44
18gb|AC136922.8| Mus musculus chromosome 1, clone RP23-81L22, comp... 42 1.7
19gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, com... 42 1.7
20emb|AL627250.8| Human DNA sequence from clone RP13-222H17 on chr... 42 1.7
21gb|AC092846.5| Homo sapiens BAC clone RP11-617A17 from 4, comple... 42 1.7
22gb|AC084377.5| Homo sapiens BAC clone RP11-478L9 from 2, complet... 42 1.7
23gb|AC019060.5|AC019060 Homo sapiens BAC clone RP11-125K5 from Y,... 42 1.7
24ref|NM_103836.3| Arabidopsis thaliana RTV1; DNA binding / transc... 40 6.9
25gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome... 40 6.9
26gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 6.9
27gb|AC133518.3| Mus musculus BAC clone RP23-138G24 from chromosom... 40 6.9
28gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 geno... 40 6.9
29gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence 40 6.9
30emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BA... 40 6.9
31gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswel... 40 6.9
32ref|XM_694860.1| PREDICTED: Danio rerio similar to ribosomal pro... 40 6.9
33emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19,... 40 6.9
34gb|AC147643.4| Mus musculus BAC clone RP23-35L23 from chromosome... 40 6.9
35gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 6.9
36gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, comp... 40 6.9
37emb|BX814364.1|CNS0AEI2 Arabidopsis thaliana Full-length cDNA Co... 40 6.9
38emb|BX815859.1|CNS0AD86 Arabidopsis thaliana Full-length cDNA Co... 40 6.9
39emb|BX816536.1|CNS0AD6P Arabidopsis thaliana Full-length cDNA Co... 40 6.9
40emb|BX816391.1|CNS0AD3Z Arabidopsis thaliana Full-length cDNA Co... 40 6.9
41gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, compl... 40 6.9
42gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63... 40 6.9
43gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, comple... 40 6.9
44gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 m... 40 6.9 
>ref|XM_476192.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score =  339 bits (171), Expect = 5e-90
 Identities = 373/439 (84%), Gaps = 6/439 (1%)
 Strand = Plus / Plus

                                                                       
Query: 25  ttgaagaaaggaagagagagttgactgacaagctggataccttgaataagaaaaagcatg 84
           ||||||||||||| | ||| |||| ||||||||||||||| || || |||||||||||||
Sbjct: 497 ttgaagaaaggaaaaaagaattgagtgacaagctggatactttaaacaagaaaaagcatg 556

                                                                       
Query: 85  atctcgtgcagatgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagca 144
           |||| ||||||||||||||||||||||||||||| |||||||||||||| |  |||| ||
Sbjct: 557 atcttgtgcagatgctgaagcagattttaaatgctgaagaagaaatcaggatgcgcacca 616

                                                                       
Query: 145 tgcaggcttcgctgcgtgctgccatgcctcagccgccagaaaacacagctgatggaagtg 204
           ||||||| ||  ||||  || |  ||||||||||  |||||||| |||| ||||||||| 
Sbjct: 617 tgcaggcctcattgcgcactactgtgcctcagccatcagaaaacgcagccgatggaagtt 676

                                                                       
Query: 205 ---ttcccagacaggtgcccagaatgaccgttgatgtcaatttcagcgagtttgctgggg 261
              || | || | |||||||||||||||||||||||||||||| || ||  ||||||| |
Sbjct: 677 ctatttctaggctggtgcccagaatgaccgttgatgtcaattttagtgatgttgctggcg 736

                                                                       
Query: 262 agtcagatgctggttccaaccagggcactcctggacgtcccttgcatcatgtccacagta 321
           |||| || || ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 737 agtctgaggcgggttccaaccagggcactcctggacgtcccttgcatcatgttcatagta 796

                                                                       
Query: 322 tttctccttcaacagcctcctttgctaggtctccatttggttctcgcaaccacaaccctg 381
           ||||||||||||||||||| |||||||||||||| || ||||||| | | |||||  |||
Sbjct: 797 tttctccttcaacagcctcttttgctaggtctccgttcggttctctccaacacaattctg 856

                                                                       
Query: 382 gcaacactccaagaagtccagcagcacctttctctacagcaagcccgtctcgcttcgcag 441
           |  |||||||||||||||   ||||  ||||||| |||||||| ||||| ||||| ||||
Sbjct: 857 gtcacactccaagaagtc---cagcgactttctcgacagcaagtccgtcccgctttgcag 913

                              
Query: 442 gtaccgggcatcaaggaca 460
            ||| ||  ||||||||||
Sbjct: 914 ctactggaaatcaaggaca 932
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>dbj|AK109456.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D12, full
            insert sequence
          Length = 1535

 Score =  339 bits (171), Expect = 5e-90
 Identities = 373/439 (84%), Gaps = 6/439 (1%)
 Strand = Plus / Plus

                                                                        
Query: 25   ttgaagaaaggaagagagagttgactgacaagctggataccttgaataagaaaaagcatg 84
            ||||||||||||| | ||| |||| ||||||||||||||| || || |||||||||||||
Sbjct: 763  ttgaagaaaggaaaaaagaattgagtgacaagctggatactttaaacaagaaaaagcatg 822

                                                                        
Query: 85   atctcgtgcagatgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagca 144
            |||| ||||||||||||||||||||||||||||| |||||||||||||| |  |||| ||
Sbjct: 823  atcttgtgcagatgctgaagcagattttaaatgctgaagaagaaatcaggatgcgcacca 882

                                                                        
Query: 145  tgcaggcttcgctgcgtgctgccatgcctcagccgccagaaaacacagctgatggaagtg 204
            ||||||| ||  ||||  || |  ||||||||||  |||||||| |||| ||||||||| 
Sbjct: 883  tgcaggcctcattgcgcactactgtgcctcagccatcagaaaacgcagccgatggaagtt 942

                                                                        
Query: 205  ---ttcccagacaggtgcccagaatgaccgttgatgtcaatttcagcgagtttgctgggg 261
               || | || | |||||||||||||||||||||||||||||| || ||  ||||||| |
Sbjct: 943  ctatttctaggctggtgcccagaatgaccgttgatgtcaattttagtgatgttgctggcg 1002

                                                                        
Query: 262  agtcagatgctggttccaaccagggcactcctggacgtcccttgcatcatgtccacagta 321
            |||| || || ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 1003 agtctgaggcgggttccaaccagggcactcctggacgtcccttgcatcatgttcatagta 1062

                                                                        
Query: 322  tttctccttcaacagcctcctttgctaggtctccatttggttctcgcaaccacaaccctg 381
            ||||||||||||||||||| |||||||||||||| || ||||||| | | |||||  |||
Sbjct: 1063 tttctccttcaacagcctcttttgctaggtctccgttcggttctctccaacacaattctg 1122

                                                                        
Query: 382  gcaacactccaagaagtccagcagcacctttctctacagcaagcccgtctcgcttcgcag 441
            |  |||||||||||||||   ||||  ||||||| |||||||| ||||| ||||| ||||
Sbjct: 1123 gtcacactccaagaagtc---cagcgactttctcgacagcaagtccgtcccgctttgcag 1179

                               
Query: 442  gtaccgggcatcaaggaca 460
             ||| ||  ||||||||||
Sbjct: 1180 ctactggaaatcaaggaca 1198
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>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0043H23, complete sequence
          Length = 134097

 Score =  220 bits (111), Expect = 3e-54
 Identities = 227/265 (85%), Gaps = 3/265 (1%)
 Strand = Plus / Plus

                                                                         
Query: 105   cagattttaaatgccgaagaagaaatcagaagacgcagcatgcaggcttcgctgcgtgct 164
             |||||||||||||| |||||||||||||| |  |||| ||||||||| ||  ||||  ||
Sbjct: 39701 cagattttaaatgctgaagaagaaatcaggatgcgcaccatgcaggcctcattgcgcact 39760

                                                                         
Query: 165   gccatgcctcagccgccagaaaacacagctgatggaagtg---ttcccagacaggtgccc 221
              |  ||||||||||  |||||||| |||| |||||||||    || | || | |||||||
Sbjct: 39761 actgtgcctcagccatcagaaaacgcagccgatggaagttctatttctaggctggtgccc 39820

                                                                         
Query: 222   agaatgaccgttgatgtcaatttcagcgagtttgctggggagtcagatgctggttccaac 281
             ||||||||||||||||||||||| || ||  ||||||| ||||| || || |||||||||
Sbjct: 39821 agaatgaccgttgatgtcaattttagtgatgttgctggcgagtctgaggcgggttccaac 39880

                                                                         
Query: 282   cagggcactcctggacgtcccttgcatcatgtccacagtatttctccttcaacagcctcc 341
             |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| 
Sbjct: 39881 cagggcactcctggacgtcccttgcatcatgttcatagtatttctccttcaacagcctct 39940

                                      
Query: 342   tttgctaggtctccatttggttctc 366
             |||||||||||||| || |||||||
Sbjct: 39941 tttgctaggtctccgttcggttctc 39965



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                         
Query: 25    ttgaagaaaggaagagagagttgactgacaagctggataccttgaataagaaaaagcatg 84
             ||||||||||||| | ||| |||| ||||||||||||||| || || |||||||||||||
Sbjct: 38543 ttgaagaaaggaaaaaagaattgagtgacaagctggatactttaaacaagaaaaagcatg 38602

                                    
Query: 85    atctcgtgcagatgctgaagcag 107
             |||| ||||||||||||||||||
Sbjct: 38603 atcttgtgcagatgctgaagcag 38625
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>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08,
             complete sequence
          Length = 152527

 Score =  220 bits (111), Expect = 3e-54
 Identities = 227/265 (85%), Gaps = 3/265 (1%)
 Strand = Plus / Plus

                                                                         
Query: 105   cagattttaaatgccgaagaagaaatcagaagacgcagcatgcaggcttcgctgcgtgct 164
             |||||||||||||| |||||||||||||| |  |||| ||||||||| ||  ||||  ||
Sbjct: 75179 cagattttaaatgctgaagaagaaatcaggatgcgcaccatgcaggcctcattgcgcact 75238

                                                                         
Query: 165   gccatgcctcagccgccagaaaacacagctgatggaagtg---ttcccagacaggtgccc 221
              |  ||||||||||  |||||||| |||| |||||||||    || | || | |||||||
Sbjct: 75239 actgtgcctcagccatcagaaaacgcagccgatggaagttctatttctaggctggtgccc 75298

                                                                         
Query: 222   agaatgaccgttgatgtcaatttcagcgagtttgctggggagtcagatgctggttccaac 281
             ||||||||||||||||||||||| || ||  ||||||| ||||| || || |||||||||
Sbjct: 75299 agaatgaccgttgatgtcaattttagtgatgttgctggcgagtctgaggcgggttccaac 75358

                                                                         
Query: 282   cagggcactcctggacgtcccttgcatcatgtccacagtatttctccttcaacagcctcc 341
             |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| 
Sbjct: 75359 cagggcactcctggacgtcccttgcatcatgttcatagtatttctccttcaacagcctct 75418

                                      
Query: 342   tttgctaggtctccatttggttctc 366
             |||||||||||||| || |||||||
Sbjct: 75419 tttgctaggtctccgttcggttctc 75443



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                         
Query: 25    ttgaagaaaggaagagagagttgactgacaagctggataccttgaataagaaaaagcatg 84
             ||||||||||||| | ||| |||| ||||||||||||||| || || |||||||||||||
Sbjct: 74021 ttgaagaaaggaaaaaagaattgagtgacaagctggatactttaaacaagaaaaagcatg 74080

                                    
Query: 85    atctcgtgcagatgctgaagcag 107
             |||| ||||||||||||||||||
Sbjct: 74081 atcttgtgcagatgctgaagcag 74103
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  220 bits (111), Expect = 3e-54
 Identities = 227/265 (85%), Gaps = 3/265 (1%)
 Strand = Plus / Plus

                                                                           
Query: 105     cagattttaaatgccgaagaagaaatcagaagacgcagcatgcaggcttcgctgcgtgct 164
               |||||||||||||| |||||||||||||| |  |||| ||||||||| ||  ||||  ||
Sbjct: 7336924 cagattttaaatgctgaagaagaaatcaggatgcgcaccatgcaggcctcattgcgcact 7336983

                                                                           
Query: 165     gccatgcctcagccgccagaaaacacagctgatggaagtg---ttcccagacaggtgccc 221
                |  ||||||||||  |||||||| |||| |||||||||    || | || | |||||||
Sbjct: 7336984 actgtgcctcagccatcagaaaacgcagccgatggaagttctatttctaggctggtgccc 7337043

                                                                           
Query: 222     agaatgaccgttgatgtcaatttcagcgagtttgctggggagtcagatgctggttccaac 281
               ||||||||||||||||||||||| || ||  ||||||| ||||| || || |||||||||
Sbjct: 7337044 agaatgaccgttgatgtcaattttagtgatgttgctggcgagtctgaggcgggttccaac 7337103

                                                                           
Query: 282     cagggcactcctggacgtcccttgcatcatgtccacagtatttctccttcaacagcctcc 341
               |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| 
Sbjct: 7337104 cagggcactcctggacgtcccttgcatcatgttcatagtatttctccttcaacagcctct 7337163

                                        
Query: 342     tttgctaggtctccatttggttctc 366
               |||||||||||||| || |||||||
Sbjct: 7337164 tttgctaggtctccgttcggttctc 7337188



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                           
Query: 25      ttgaagaaaggaagagagagttgactgacaagctggataccttgaataagaaaaagcatg 84
               ||||||||||||| | ||| |||| ||||||||||||||| || || |||||||||||||
Sbjct: 7335766 ttgaagaaaggaaaaaagaattgagtgacaagctggatactttaaacaagaaaaagcatg 7335825

                                      
Query: 85      atctcgtgcagatgctgaagcag 107
               |||| ||||||||||||||||||
Sbjct: 7335826 atcttgtgcagatgctgaagcag 7335848
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>ref|NM_114655.3| Arabidopsis thaliana unknown protein AT3G47850 mRNA, complete cds
          Length = 1235

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 613 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 659
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>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete
              sequence
          Length = 263757

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 86     tctcgtgcagatgctgaagcaga 108
              |||||||||||||||||||||||
Sbjct: 234705 tctcgtgcagatgctgaagcaga 234727
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>gb|AY116964.1| Arabidopsis thaliana AT3g47850/T23J7_180 mRNA, complete cds
          Length = 969

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 524 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 570
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>ref|XM_685788.1| PREDICTED: Danio rerio similar to phosphorylase kinase alpha 1
            (LOC562402), mRNA
          Length = 3228

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 86   tctcgtgcagatgctgaagcaga 108
            |||||||||||||||||||||||
Sbjct: 2148 tctcgtgcagatgctgaagcaga 2170
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>gb|AF428310.1|AF428310 Arabidopsis thaliana AT3g47850/T23J7_180 mRNA, complete cds
          Length = 1160

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 575 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 621
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>emb|BX822580.1|CNS0A765 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB4ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 616 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 662
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>emb|BX825399.1|CNS0A6EB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZF10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1157

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 613 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 659
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>emb|BX842231.1|CNS09YEF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL88ZH01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1127

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 529 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 575
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>gb|AY086386.1| Arabidopsis thaliana clone 2485 mRNA, complete sequence
          Length = 1168

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 97  tgctgaagcagattttaaatgccgaagaagaaatcagaagacgcagc 143
           |||| ||||||||||||||||| || |||||| | | ||||||||||
Sbjct: 556 tgcttaagcagattttaaatgctgaggaagaattgaaaagacgcagc 602
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>gb|AC117475.2| Homo sapiens 3 BAC RP11-742C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 117000

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 14     acctgatggagttgaagaaagg 35
              ||||||||||||||||||||||
Sbjct: 102916 acctgatggagttgaagaaagg 102937
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>gb|AF056724.1|HSSLC21A06 Homo sapiens prostaglandin transporter (SLC21A2) gene, exon 6
          Length = 566

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 14  acctgatggagttgaagaaagg 35
           ||||||||||||||||||||||
Sbjct: 349 acctgatggagttgaagaaagg 370
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>gb|AC163696.3| Ornithorhynchus anatinus BAC clone OABb-153I22 from chromosome unknown,
             complete sequence
          Length = 139018

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ggagttgaagaaaggaagagag 42
             ||||||||||||||||||||||
Sbjct: 35126 ggagttgaagaaaggaagagag 35105
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>gb|AC136922.8| Mus musculus chromosome 1, clone RP23-81L22, complete sequence
          Length = 225579

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     gagttgaagaaaggaagagag 42
              |||||||||||||||||||||
Sbjct: 126064 gagttgaagaaaggaagagag 126084
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>gb|AC130672.10| Mus musculus chromosome 1, clone RP24-95L18, complete sequence
          Length = 208480

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 gagttgaagaaaggaagagag 42
          |||||||||||||||||||||
Sbjct: 66 gagttgaagaaaggaagagag 86
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>emb|AL627250.8| Human DNA sequence from clone RP13-222H17 on chromosome X Contains a
             novel pseudogene, complete sequence
          Length = 177796

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   acagtatttctccttcaacag 336
             |||||||||||||||||||||
Sbjct: 10504 acagtatttctccttcaacag 10524
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>gb|AC092846.5| Homo sapiens BAC clone RP11-617A17 from 4, complete sequence
          Length = 197540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   aagaaaggaagagagagttga 48
            |||||||||||||||||||||
Sbjct: 8302 aagaaaggaagagagagttga 8322
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>gb|AC084377.5| Homo sapiens BAC clone RP11-478L9 from 2, complete sequence
          Length = 152320

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   gtccacagtatttctccttca 332
             |||||||||||||||||||||
Sbjct: 95067 gtccacagtatttctccttca 95047
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>gb|AC019060.5|AC019060 Homo sapiens BAC clone RP11-125K5 from Y, complete sequence
          Length = 116795

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 316  acagtatttctccttcaacag 336
            |||||||||||||||||||||
Sbjct: 9292 acagtatttctccttcaacag 9312
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>ref|NM_103836.3| Arabidopsis thaliana RTV1; DNA binding / transcription factor
           AT1G49480 (RTV1) mRNA, complete cds
          Length = 1598

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gttgaagaaaggaagagaga 43
           ||||||||||||||||||||
Sbjct: 326 gttgaagaaaggaagagaga 307
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>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence
          Length = 227709

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   ctccttcaacagcctccttt 344
             ||||||||||||||||||||
Sbjct: 22812 ctccttcaacagcctccttt 22831
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     ttcaacagcctcctttgcta 348
               ||||||||||||||||||||
Sbjct: 1236745 ttcaacagcctcctttgcta 1236726
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>gb|AC133518.3| Mus musculus BAC clone RP23-138G24 from chromosome 7, complete sequence
          Length = 195464

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttgaagaaaggaagagagag 44
             ||||||||||||||||||||
Sbjct: 90950 ttgaagaaaggaagagagag 90931
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>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence, complete
             sequence
          Length = 125021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    gttgaagaaaggaagagaga 43
             ||||||||||||||||||||
Sbjct: 27589 gttgaagaaaggaagagaga 27570
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>gb|AC095021.2| Sus scrofa clone RP44-290D23, complete sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   aagtgttcccagacaggtgcccag 223
             |||||||||||| |||||||||||
Sbjct: 15426 aagtgttcccaggcaggtgcccag 15403
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>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
          Length = 92493

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 104   gcagattttaaatgccgaagaagaaatcagaagacgcagc 143
             ||||||||||||||| || |||||| | | ||||||||||
Sbjct: 78985 gcagattttaaatgctgaggaagaattgaaaagacgcagc 78946
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>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179649

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     agaaaggaagagagagttga 48
              ||||||||||||||||||||
Sbjct: 103105 agaaaggaagagagagttga 103124
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>ref|XM_694860.1| PREDICTED: Danio rerio similar to ribosomal protein S6 kinase, 90kDa,
            polypeptide 2 isoform a (LOC571285), mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   acctgatggagttgaagaaa 33
            ||||||||||||||||||||
Sbjct: 1029 acctgatggagttgaagaaa 1048
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>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence
          Length = 148298

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     acctgatggagttgaagaaa 33
              ||||||||||||||||||||
Sbjct: 111888 acctgatggagttgaagaaa 111907
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>gb|AC147643.4| Mus musculus BAC clone RP23-35L23 from chromosome 7, complete sequence
          Length = 205110

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttgaagaaaggaagagagag 44
             ||||||||||||||||||||
Sbjct: 21101 ttgaagaaaggaagagagag 21120
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>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttgaagaaaggaagagagag 44
             ||||||||||||||||||||
Sbjct: 27643 ttgaagaaaggaagagagag 27624
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>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ctccttcaacagcctccttt 344
              ||||||||||||||||||||
Sbjct: 179714 ctccttcaacagcctccttt 179733
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>emb|BX814364.1|CNS0AEI2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZF03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 350

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gttgaagaaaggaagagaga 43
           ||||||||||||||||||||
Sbjct: 315 gttgaagaaaggaagagaga 296
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>emb|BX815859.1|CNS0AD86 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH13ZB06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gttgaagaaaggaagagaga 43
           ||||||||||||||||||||
Sbjct: 214 gttgaagaaaggaagagaga 195
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>emb|BX816536.1|CNS0AD6P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH54ZB06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gttgaagaaaggaagagaga 43
           ||||||||||||||||||||
Sbjct: 218 gttgaagaaaggaagagaga 199
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>emb|BX816391.1|CNS0AD3Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1420

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gttgaagaaaggaagagaga 43
           ||||||||||||||||||||
Sbjct: 325 gttgaagaaaggaagagaga 306
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>gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, complete sequence
          Length = 194040

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    ccgccagaaaacacagctga 196
              ||||||||||||||||||||
Sbjct: 174532 ccgccagaaaacacagctga 174551
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>gb|AE003522.3| Drosophila melanogaster chromosome 3L, section 63 of 83 of the complete
              sequence
          Length = 302050

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     agaaaggaagagagagttga 48
              ||||||||||||||||||||
Sbjct: 101353 agaaaggaagagagagttga 101334
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>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence
          Length = 194931

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    ccgccagaaaacacagctga 196
              ||||||||||||||||||||
Sbjct: 172588 ccgccagaaaacacagctga 172569
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>gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 map 5, complete sequence
          Length = 203821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    ccgccagaaaacacagctga 196
              ||||||||||||||||||||
Sbjct: 199898 ccgccagaaaacacagctga 199879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,098,129
Number of Sequences: 3902068
Number of extensions: 5098129
Number of successful extensions: 105021
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104910
Number of HSP's gapped (non-prelim): 111
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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