ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20g22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464016.1| Oryza sativa (japonica cultivar-group), mRNA 303 3e-79
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
3dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
4gb|AY106555.1| Zea mays PCO112740 mRNA sequence 149 1e-32
5gb|AY112025.1| Zea mays CL12360_1 mRNA sequence 103 7e-19
6emb|AL138788.6| Human DNA sequence from clone RP4-692D3 on chrom... 44 0.52
7gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23... 44 0.52
8gb|AC005554.2|AC005554 Drosophila melanogaster, chromosome 2L, r... 44 0.52
9gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10... 44 0.52
10gb|AY288982.1| Homo sapiens antigen MLAA-39 mRNA, complete cds 42 2.1
11emb|AL445528.16| Human DNA sequence from clone RP11-419N10 on ch... 42 2.1
12emb|X65292.1|GGVIG G.gallus mRNA for vigilin 42 2.1
13ref|NM_205096.1| Gallus gallus high density lipoprotein binding ... 42 2.1
14gb|AC023043.8| Homo sapiens chromosome 18, clone RP11-49I11, com... 42 2.1
15gb|AC055840.10| Homo sapiens chromosome 18, clone RP11-645I23, c... 42 2.1
16dbj|AB168516.1| Macaca fascicularis testis cDNA clone: QtsA-1271... 42 2.1
17emb|AJ238085.1|DME238085 Drosophila melanogaster single P{lacW} ... 42 2.1
18gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, com... 40 8.2
19gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome... 40 8.2
20gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome... 40 8.2
21gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, com... 40 8.2
22gb|DQ479851.1| Homo sapiens ubiquitin A-52 residue ribosomal pro... 40 8.2
23ref|XM_505225.1| Yarrowia lipolytica CLIB122, YALI0F09856g predi... 40 8.2
24emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chro... 40 8.2
25gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosom... 40 8.2
26gb|AC022450.5| Homo sapiens chromosome 5 clone RP11-96F10, compl... 40 8.2
27gb|AC084361.19| Homo sapiens 12 BAC RP11-364C11 (Roswell Park Ca... 40 8.2
28gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosom... 40 8.2
29gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.2
30gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, comple... 40 8.2
31gb|AC142452.5| Mus musculus BAC clone RP24-266E20 from 3, comple... 40 8.2
32gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, comp... 40 8.2
33gb|AC005253.1|AC005253 Homo sapiens chromosome 19, cosmid R26445... 40 8.2
34gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, comple... 40 8.2
35emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 8.2
36gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, compl... 40 8.2 
>ref|XM_464016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1605

 Score =  303 bits (153), Expect = 3e-79
 Identities = 353/417 (84%), Gaps = 2/417 (0%)
 Strand = Plus / Plus

                                                                        
Query: 179  gctttgaagcgcagtaggaagagagtcaggaatgctcttcaaactgaactgccgcacctg 238
            |||||||||||||| | |||||||||||||||||| ||||| |||||||||||  |||| 
Sbjct: 1165 gctttgaagcgcagcaagaagagagtcaggaatgcccttcagactgaactgccctaccta 1224

                                                                        
Query: 239  atatcaacagaattctcatctagtcaagagaacgaaccatccattgcacattcttctgaa 298
            |||||||||||||| |||| ||  |||||||||||||||||| ||| |||||||||||| 
Sbjct: 1225 atatcaacagaattttcatataaccaagagaacgaaccatccgttgtacattcttctgat 1284

                                                                        
Query: 299  gctgggcccactggaaaaacagtttcagaagaacatgttgcacggtggaggtctctattc 358
            | |||  | ||||||||||||||| ||||||  ||||| ||||| ||| ||||||| || 
Sbjct: 1285 ggtggatctactggaaaaacagttccagaagcgcatgtggcacgatggcggtctcttttt 1344

                                                                        
Query: 359  cttcagatggaaagaacactgcaggaggaagggaggcacttggaaattcggttgaaggaa 418
            ||||||||||| |||||||| |||||||| |||| |||  |||| | |||||||||||||
Sbjct: 1345 cttcagatggacagaacacttcaggaggaggggatgcatctggagaatcggttgaaggaa 1404

                                                                        
Query: 419  gtgcaaggaatgttgcagaattgtgataaaggcctaaaacaagtgacttgtgaggctcca 478
            ||||||| ||||     ||||||||| ||||| || | | |  || |||| |||||||||
Sbjct: 1405 gtgcaagaaatgcaaatgaattgtgagaaagggctcagatacatggcttgcgaggctcca 1464

                                                                        
Query: 479  ctgctaggcccaatggctgaattatggaagctgaagaacccggagatctctgagaggtga 538
             |  |||| |||||||||||||||||||| ||||||||| ||||||   |||||| | ||
Sbjct: 1465 ttagtaggaccaatggctgaattatggaaactgaagaactcggagactcctgaga-gcga 1523

                                                                     
Query: 539  gtgggcagtgcaagctgctgccggcgtccatctactcaacatgcaacctggtcatga 595
            |||||||||||||||||||||| || ||||||||||| || ||||||||||||||||
Sbjct: 1524 gtgggcagtgcaagctgctgcc-gcttccatctactcgacttgcaacctggtcatga 1579



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 83/101 (82%), Gaps = 6/101 (5%)
 Strand = Plus / Plus

                                                                        
Query: 20   caactctcatcaacagtcactatggcttccgataggacatgtagtacatta------gat 73
            |||||||||||| |||||||||||||||| || ||||| || ||||||| |      |||
Sbjct: 1063 caactctcatcagcagtcactatggcttcagacaggacctgcagtacatcagccgatgat 1122

                                                     
Query: 74   catgaatctcaacatgattacatgactgtgctatcagtaaa 114
              || |||| | |||||||||||||||||| ||||||||||
Sbjct: 1123 tttgcatctaatcatgattacatgactgtgttatcagtaaa 1163
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Minus

                                                                           
Query: 179     gctttgaagcgcagtaggaagagagtcaggaatgctcttcaaactgaactgccgcacctg 238
               |||||||||||||| | |||||||||||||||||| ||||| |||||||||||  |||| 
Sbjct: 1674056 gctttgaagcgcagcaagaagagagtcaggaatgcccttcagactgaactgccctaccta 1673997

                                                                           
Query: 239     atatcaacagaattctcatctagtcaagagaacgaaccatccattgcacattcttctgaa 298
               |||||||||||||| |||| ||  |||||||||||||||||| ||| |||||||||||| 
Sbjct: 1673996 atatcaacagaattttcatataaccaagagaacgaaccatccgttgtacattcttctgat 1673937

                                                                           
Query: 299     gctgggcccactggaaaaacagtttcagaagaacatgttgcacggtggaggtctctattc 358
               | |||  | ||||||||||||||| ||||||  ||||| ||||| ||| ||||||| || 
Sbjct: 1673936 ggtggatctactggaaaaacagttccagaagcgcatgtggcacgatggcggtctcttttt 1673877

                                                 
Query: 359     cttcagatggaaagaacactgcaggaggaaggga 392
               ||||||||||| |||||||| |||||||| ||||
Sbjct: 1673876 cttcagatggacagaacacttcaggaggagggga 1673843



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 81/92 (88%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                           
Query: 504     ggaagctgaagaacccggagatctctgagaggtgagtgggcagtgcaagctgctgccggc 563
               |||| ||||||||| ||||||   |||||||  |||||||||||||||||||||||| ||
Sbjct: 1673308 ggaaactgaagaactcggagactcctgagagc-gagtgggcagtgcaagctgctgcc-gc 1673251

                                               
Query: 564     gtccatctactcaacatgcaacctggtcatga 595
                ||||||||||| || ||||||||||||||||
Sbjct: 1673250 ttccatctactcgacttgcaacctggtcatga 1673219



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 83/101 (82%), Gaps = 6/101 (5%)
 Strand = Plus / Minus

                                                                           
Query: 20      caactctcatcaacagtcactatggcttccgataggacatgtagtacatta------gat 73
               |||||||||||| |||||||||||||||| || ||||| || ||||||| |      |||
Sbjct: 1674411 caactctcatcagcagtcactatggcttcagacaggacctgcagtacatcagccgatgat 1674352

                                                        
Query: 74      catgaatctcaacatgattacatgactgtgctatcagtaaa 114
                 || |||| | |||||||||||||||||| ||||||||||
Sbjct: 1674351 tttgcatctaatcatgattacatgactgtgttatcagtaaa 1674311



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 119     gccagtgttgcctctcagtggctggagcttctgcagcaggacatacgagggcggcttgct 178
               |||| |||||| ||||||||| ||||||| || |||||||||||  ||||||| ||||||
Sbjct: 1674196 gccaatgttgcttctcagtggttggagctactacagcaggacatcagagggcgccttgct 1674137

                
Query: 179     g 179
               |
Sbjct: 1674136 g 1674136



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                           
Query: 406     tcggttgaaggaagtgcaaggaatgttgcagaattgtgataaaggcctaaaacaagtgac 465
               |||||||||||||||||||| ||||     ||||||||| ||||| || | | |  || |
Sbjct: 1673670 tcggttgaaggaagtgcaagaaatgcaaatgaattgtgagaaagggctcagatacatggc 1673611

                                                       
Query: 466     ttgtgaggctccactgctaggcccaatggctgaattatgg 505
               ||| ||||||||| |  |||| ||||||||||||||||||
Sbjct: 1673610 ttgcgaggctccattagtaggaccaatggctgaattatgg 1673571
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>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1007_D04
          Length = 125503

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Minus

                                                                          
Query: 179    gctttgaagcgcagtaggaagagagtcaggaatgctcttcaaactgaactgccgcacctg 238
              |||||||||||||| | |||||||||||||||||| ||||| |||||||||||  |||| 
Sbjct: 111159 gctttgaagcgcagcaagaagagagtcaggaatgcccttcagactgaactgccctaccta 111100

                                                                          
Query: 239    atatcaacagaattctcatctagtcaagagaacgaaccatccattgcacattcttctgaa 298
              |||||||||||||| |||| ||  |||||||||||||||||| ||| |||||||||||| 
Sbjct: 111099 atatcaacagaattttcatataaccaagagaacgaaccatccgttgtacattcttctgat 111040

                                                                          
Query: 299    gctgggcccactggaaaaacagtttcagaagaacatgttgcacggtggaggtctctattc 358
              | |||  | ||||||||||||||| ||||||  ||||| ||||| ||| ||||||| || 
Sbjct: 111039 ggtggatctactggaaaaacagttccagaagcgcatgtggcacgatggcggtctcttttt 110980

                                                
Query: 359    cttcagatggaaagaacactgcaggaggaaggga 392
              ||||||||||| |||||||| |||||||| ||||
Sbjct: 110979 cttcagatggacagaacacttcaggaggagggga 110946



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 81/92 (88%), Gaps = 2/92 (2%)
 Strand = Plus / Minus

                                                                          
Query: 504    ggaagctgaagaacccggagatctctgagaggtgagtgggcagtgcaagctgctgccggc 563
              |||| ||||||||| ||||||   |||||||  |||||||||||||||||||||||| ||
Sbjct: 110411 ggaaactgaagaactcggagactcctgagagc-gagtgggcagtgcaagctgctgcc-gc 110354

                                              
Query: 564    gtccatctactcaacatgcaacctggtcatga 595
               ||||||||||| || ||||||||||||||||
Sbjct: 110353 ttccatctactcgacttgcaacctggtcatga 110322



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 83/101 (82%), Gaps = 6/101 (5%)
 Strand = Plus / Minus

                                                                          
Query: 20     caactctcatcaacagtcactatggcttccgataggacatgtagtacatta------gat 73
              |||||||||||| |||||||||||||||| || ||||| || ||||||| |      |||
Sbjct: 111514 caactctcatcagcagtcactatggcttcagacaggacctgcagtacatcagccgatgat 111455

                                                       
Query: 74     catgaatctcaacatgattacatgactgtgctatcagtaaa 114
                || |||| | |||||||||||||||||| ||||||||||
Sbjct: 111454 tttgcatctaatcatgattacatgactgtgttatcagtaaa 111414



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 119    gccagtgttgcctctcagtggctggagcttctgcagcaggacatacgagggcggcttgct 178
              |||| |||||| ||||||||| ||||||| || |||||||||||  ||||||| ||||||
Sbjct: 111299 gccaatgttgcttctcagtggttggagctactacagcaggacatcagagggcgccttgct 111240

               
Query: 179    g 179
              |
Sbjct: 111239 g 111239



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                          
Query: 406    tcggttgaaggaagtgcaaggaatgttgcagaattgtgataaaggcctaaaacaagtgac 465
              |||||||||||||||||||| ||||     ||||||||| ||||| || | | |  || |
Sbjct: 110773 tcggttgaaggaagtgcaagaaatgcaaatgaattgtgagaaagggctcagatacatggc 110714

                                                      
Query: 466    ttgtgaggctccactgctaggcccaatggctgaattatgg 505
              ||| ||||||||| |  |||| ||||||||||||||||||
Sbjct: 110713 ttgcgaggctccattagtaggaccaatggctgaattatgg 110674
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>gb|AY106555.1| Zea mays PCO112740 mRNA sequence
          Length = 546

 Score =  149 bits (75), Expect = 1e-32
 Identities = 284/351 (80%), Gaps = 2/351 (0%)
 Strand = Plus / Plus

                                                                       
Query: 245 acagaattctcatctagtcaagagaacgaaccatccattgcacattcttctgaagctggg 304
           |||||||| |||||||  |||||||||||| ||||||||||| || | | ||| ||||| 
Sbjct: 11  acagaattttcatctaaccaagagaacgaatcatccattgcaaatacgtgtgatgctgga 70

                                                                       
Query: 305 cccactggaaaaacagtttcagaagaacatgttgcacggtggaggtctctattccttcag 364
              |||| |||| ||||||||||||  ||||| ||||| ||||||||||| ||  | |||
Sbjct: 71  tgtactgaaaaagcagtttcagaagcgcatgtggcacgatggaggtctctgtttgtccag 130

                                                                       
Query: 365 atggaaagaacactgcaggaggaagggaggcacttggaaattcggttgaaggaagtgcaa 424
           |||||  || |||| |||||||||||||  ||  |||| |  ||||||||| ||||||||
Sbjct: 131 atggaccgagcacttcaggaggaagggaaacagctggagaaccggttgaagcaagtgcaa 190

                                                                       
Query: 425 ggaatgttgcagaattgtgataaaggcctaaaacaagtgacttgtgaggctccactgcta 484
           | ||||     |||||||||||||||||| |||||  |||  ||||| ||||| ||||||
Sbjct: 191 gaaatgcaatcgaattgtgataaaggcctcaaacacatgagctgtgaagctcctctgcta 250

                                                                       
Query: 485 ggcccaatggctgaattatggaagctgaagaacccggagatctctgagaggtgagtgggc 544
           || || ||  ||||  ||||||||||||||||||| || || ||||||| ||||||||||
Sbjct: 251 ggacctattcctgagctatggaagctgaagaacccagatatttctgaga-gtgagtgggc 309

                                                              
Query: 545 agtgcaagctgctgccggcgtccatctactcaacatgcaacctggtcatga 595
            ||||||||||| ||| || || |||||||| || |||||| ||| |||||
Sbjct: 310 ggtgcaagctgccgcc-gcatcaatctactcgacctgcaacatggccatga 359
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>gb|AY112025.1| Zea mays CL12360_1 mRNA sequence
          Length = 600

 Score =  103 bits (52), Expect = 7e-19
 Identities = 135/160 (84%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 436 gaattgtgataaaggcctaaaacaagtgacttgtgaggctccactgctaggcccaatggc 495
           |||||||||||||||||| |||||  |||| ||||| ||||| |||||||| || |||||
Sbjct: 376 gaattgtgataaaggcctcaaacacatgacctgtgaagctcctctgctaggacctatggc 317

                                                                       
Query: 496 tgaattatggaagctgaagaacccggagatctctgagaggtgagtgggcagtgcaagctg 555
           |||| |||||||| ||||||||||  | || || |||| | |||||||| |||||||| |
Sbjct: 316 tgaactatggaagttgaagaacccaaatatttccgaga-gcgagtgggcggtgcaagccg 258

                                                   
Query: 556 ctgccggcgtccatctactcaacatgcaacctggtcatga 595
           ||||| || || |||||||| || |||||| |||||||||
Sbjct: 257 ctgcc-gcatcgatctactcgacctgcaacatggtcatga 219



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 320 gtttcagaagaacatgttgcacggtggaggtctctattccttcagatggaaagaacactg 379
           ||||||||||  ||||| ||||| ||||||||||| ||  |||||||||| | |||||| 
Sbjct: 568 gtttcagaagctcatgtggcacgatggaggtctctgtttgttcagatggacaaaacactt 509

                        
Query: 380 caggaggaaggga 392
           |||||||||||||
Sbjct: 508 caggaggaaggga 496
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>emb|AL138788.6| Human DNA sequence from clone RP4-692D3 on chromosome 1p33-34.2
             Contains part of a novel gene, complete sequence
          Length = 67519

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 313   aaaaacagtttcagaagaacatgttg 338
             ||||||||||||||||| ||||||||
Sbjct: 31574 aaaaacagtttcagaagtacatgttg 31599
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>gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23C-23D, BAC clone
              BACR48B06, complete sequence
          Length = 184554

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 167    gggcggcttgctgctttgaagc 188
              ||||||||||||||||||||||
Sbjct: 143764 gggcggcttgctgctttgaagc 143785
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>gb|AC005554.2|AC005554 Drosophila melanogaster, chromosome 2L, region 23C4-23D4, P1 clones
             DS02380 and DS06823, complete sequence
          Length = 93375

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   gggcggcttgctgctttgaagc 188
             ||||||||||||||||||||||
Sbjct: 32398 gggcggcttgctgctttgaagc 32377
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>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete
              sequence
          Length = 314957

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 167    gggcggcttgctgctttgaagc 188
              ||||||||||||||||||||||
Sbjct: 229545 gggcggcttgctgctttgaagc 229524
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>gb|AY288982.1| Homo sapiens antigen MLAA-39 mRNA, complete cds
          Length = 706

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 212 gctcttcaaactgaactgccgcacc 236
           |||||| ||||||||||||||||||
Sbjct: 641 gctcttgaaactgaactgccgcacc 665
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>emb|AL445528.16| Human DNA sequence from clone RP11-419N10 on chromosome 1 Contains the
             APCS gene for serum amyloid P component, the OR10J6P locus
             for olfactory receptor family 10 subfamily J member 6
             pseudogene, a pentraxin-related C-reactive protein (CRP)
             pseudogene, the CRP gene for pentraxin-related C-reactive
             protein and a ribosomal protein L27 (RPL27) pseudogene,
             complete sequence
          Length = 195274

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aatctgaagttacaactctca 28
             |||||||||||||||||||||
Sbjct: 53278 aatctgaagttacaactctca 53298
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>emb|X65292.1|GGVIG G.gallus mRNA for vigilin
          Length = 4374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 342  ggtggaggtctctattccttc 362
            |||||||||||||||||||||
Sbjct: 2069 ggtggaggtctctattccttc 2089
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>ref|NM_205096.1| Gallus gallus high density lipoprotein binding protein (vigilin)
            (HDLBP), mRNA
          Length = 4374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 342  ggtggaggtctctattccttc 362
            |||||||||||||||||||||
Sbjct: 2069 ggtggaggtctctattccttc 2089
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>gb|AC023043.8| Homo sapiens chromosome 18, clone RP11-49I11, complete sequence
          Length = 185278

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    gaacactgcaggaggaaggga 392
              |||||||||||||||||||||
Sbjct: 172166 gaacactgcaggaggaaggga 172146
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>gb|AC055840.10| Homo sapiens chromosome 18, clone RP11-645I23, complete sequence
          Length = 175293

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 372  gaacactgcaggaggaaggga 392
            |||||||||||||||||||||
Sbjct: 6177 gaacactgcaggaggaaggga 6157
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>dbj|AB168516.1| Macaca fascicularis testis cDNA clone: QtsA-12711, similar to human
            hypothetical protein FLJ35757 (FLJ35757), mRNA, RefSeq:
            NM_152598.1
          Length = 2410

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 381  aggaggaagggaggcacttgg 401
            |||||||||||||||||||||
Sbjct: 2070 aggaggaagggaggcacttgg 2050
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>emb|AJ238085.1|DME238085 Drosophila melanogaster single P{lacW} element insertion 3' end,
           strain l(2)k08224
          Length = 347

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 168 ggcggcttgctgctttgaagc 188
           |||||||||||||||||||||
Sbjct: 239 ggcggcttgctgctttgaagc 219
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>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence
          Length = 185733

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 378   tgcaggaggaagggaggcacttgg 401
             ||||||||||||||||| ||||||
Sbjct: 60356 tgcaggaggaagggagggacttgg 60379
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>gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome 18, complete sequence
          Length = 193523

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   gggcagtgcaagctgctgcc 560
             ||||||||||||||||||||
Sbjct: 23019 gggcagtgcaagctgctgcc 23000
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>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence
          Length = 221662

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    ggaaagaacactgcaggaggaagg 390
              ||||||||||||||||| ||||||
Sbjct: 147937 ggaaagaacactgcaggtggaagg 147914
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>gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, complete sequence
          Length = 199235

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   tgtgctatcagtaaaggctgccag 123
             |||||||||||| |||||||||||
Sbjct: 60656 tgtgctatcagtcaaggctgccag 60679
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>gb|DQ479851.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product
            1 (UBA52) gene, complete cds
          Length = 9411

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ctgcaggaggaagggaggca 396
            ||||||||||||||||||||
Sbjct: 3244 ctgcaggaggaagggaggca 3225
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>ref|XM_505225.1| Yarrowia lipolytica CLIB122, YALI0F09856g predicted mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggctggagcttctgcagcag 157
            ||||||||||||||||||||
Sbjct: 1211 ggctggagcttctgcagcag 1192
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>emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chromosome 1p22.3-31.2
             Contains the 3' end of a novel gene (KIAA1229), complete
             sequence
          Length = 136387

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   gtgcaaggaatgttgcagaa 438
             ||||||||||||||||||||
Sbjct: 15256 gtgcaaggaatgttgcagaa 15275
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>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence
          Length = 199351

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    ttcagatggaaagaacactg 379
              ||||||||||||||||||||
Sbjct: 108770 ttcagatggaaagaacactg 108789
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>gb|AC022450.5| Homo sapiens chromosome 5 clone RP11-96F10, complete sequence
          Length = 160076

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   tggaaaaacagtttcagaag 329
             ||||||||||||||||||||
Sbjct: 51683 tggaaaaacagtttcagaag 51702
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>gb|AC084361.19| Homo sapiens 12 BAC RP11-364C11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172853

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   acgaaccatccattgcacat 289
             ||||||||||||||||||||
Sbjct: 10518 acgaaccatccattgcacat 10537
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>gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosome 6, complete sequence
          Length = 171141

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 247    agaattctcatctagtcaagagaa 270
              ||||||||||||| ||||||||||
Sbjct: 130777 agaattctcatcttgtcaagagaa 130800
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 552     gctgctgccggcgtccatct 571
               ||||||||||||||||||||
Sbjct: 2807500 gctgctgccggcgtccatct 2807519
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>gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, complete sequence
          Length = 198440

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 541   gggcagtgcaagctgctgcc 560
             ||||||||||||||||||||
Sbjct: 38144 gggcagtgcaagctgctgcc 38163
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>gb|AC142452.5| Mus musculus BAC clone RP24-266E20 from 3, complete sequence
          Length = 149936

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 313    aaaaacagtttcagaagaacatgt 336
              |||||||||||||||| |||||||
Sbjct: 139369 aaaaacagtttcagaaaaacatgt 139346
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>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence
          Length = 182659

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 378    tgcaggaggaagggaggcacttgg 401
              ||||||||||||||||| ||||||
Sbjct: 172345 tgcaggaggaagggagggacttgg 172368
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>gb|AC005253.1|AC005253 Homo sapiens chromosome 19, cosmid R26445, complete sequence
          Length = 39760

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ctgcaggaggaagggaggca 396
             ||||||||||||||||||||
Sbjct: 27556 ctgcaggaggaagggaggca 27537
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>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence
          Length = 187115

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   agaattctcatctagtcaagagaa 270
             ||||||||||||| ||||||||||
Sbjct: 47397 agaattctcatcttgtcaagagaa 47420
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     ggctggagcttctgcagcag 157
               ||||||||||||||||||||
Sbjct: 1343224 ggctggagcttctgcagcag 1343243
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>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence
          Length = 187685

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   gaacactgcaggaggaaggg 391
             ||||||||||||||||||||
Sbjct: 84094 gaacactgcaggaggaaggg 84113


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,623,618
Number of Sequences: 3902068
Number of extensions: 5623618
Number of successful extensions: 104909
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104747
Number of HSP's gapped (non-prelim): 155
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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