| Clone Name | bags20g17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7 | 31 | 1.7 | 2 | ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7 | 30 | 3.7 | 3 | Y2298_ARCFU (O27986) Hypothetical DNA primase small subunit-like... | 30 | 3.7 | 4 | ANKH_TETNG (P58369) Progressive ankylosis protein homolog (ANK) | 28 | 8.2 | 5 | TCMO_GLYEC (Q96423) Trans-cinnamate 4-monooxygenase (EC 1.14.13.... | 28 | 8.2 |
|---|
>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7| Length = 920 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +3 Query: 207 FTSIMDSAASLKAAEMYTCTLGRAICSVADRRNQSGQKHDYLGAGQSTGRDK*THQGP 380 FT +AA AA T T + ++ ++++Q ++ +GAGQS H GP Sbjct: 144 FTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHGGP 201
>ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7| Length = 920 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = +3 Query: 207 FTSIMDSAASLKAAEMYTCTLGRAICSVADRRNQSGQKHDYLGAGQSTGRDK*THQGP 380 FT +AA AA T T + ++ ++++Q ++ +G GQS H GP Sbjct: 144 FTQAAAAAAMAAAAATATATATATVAALQEKQSQELSQYGAMGTGQSFNSQFLQHGGP 201
>Y2298_ARCFU (O27986) Hypothetical DNA primase small subunit-like protein AF2298| Length = 280 Score = 29.6 bits (65), Expect = 3.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 336 LRDSHAFGRFDFSCQRLSKWLG 271 LR+ +F R++FS R+ KWLG Sbjct: 14 LRERESFYRYEFSLDRVEKWLG 35
>ANKH_TETNG (P58369) Progressive ankylosis protein homolog (ANK)| Length = 487 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/35 (37%), Positives = 26/35 (74%) Frame = -1 Query: 325 SCFWPL*FLLSATEQMARPKVHVYISAALREAAES 221 S +WPL +L AT++++RP V++++S L+ +E+ Sbjct: 239 SFWWPLALIL-ATQRISRPIVNLFVSRDLKGTSEA 272
>TCMO_GLYEC (Q96423) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +1 Query: 304 IKAAKSMTISEQASLLGETSKLTKGQVAPADGLLDLQREGESKENNI 444 +K K + E+ L S +G D +LD Q++GE E+N+ Sbjct: 250 LKLFKDYFVDERMKLESTKSTSNEGLKCAIDHILDAQKKGEINEDNV 296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.128 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,616,269 Number of Sequences: 219361 Number of extensions: 1066711 Number of successful extensions: 2395 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2342 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2395 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)