ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20g13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 6e-80
2ref|NM_191252.1| Oryza sativa (japonica cultivar-group), predic... 161 2e-36
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
5dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6ref|NM_100534.2| Arabidopsis thaliana 3-hydroxyisobutyryl-CoA hy... 52 0.001
7dbj|AK221578.1| Arabidopsis thaliana mRNA for 3-hydroxyisobutyry... 52 0.001
8gb|BT022051.1| Arabidopsis thaliana At1g06550 gene, complete cds 52 0.001
9gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana... 52 0.001
10gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 44 0.35
11emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro... 44 0.35
12emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in... 42 1.4
13emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 ... 42 1.4
14ref|NM_197847.1| Oryza sativa (japonica cultivar-group) putative... 40 5.5
15gb|BC116469.1| Danio rerio cDNA clone MGC:136239 IMAGE:7241914, ... 40 5.5
16ref|XM_957507.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
17ref|XM_327245.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.5
18gb|AC016769.10| Homo sapiens BAC clone RP11-561N12 from 7, compl... 40 5.5
19gb|AC182637.3| Pan troglodytes BAC clone CH251-431A15 from chrom... 40 5.5
20gb|AY122187.1| Drosophila melanogaster LD43341 full insert cDNA 40 5.5
21ref|NM_165852.1| Drosophila melanogaster MCPH1 CG8981-RA, transc... 40 5.5
22ref|NM_136867.1| Drosophila melanogaster MCPH1 CG8981-RB, transc... 40 5.5
23gb|AC009351.7| Drosophila melanogaster, chromosome 2L, region 26... 40 5.5
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
26gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, r... 40 5.5
27gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 40 5.5
28dbj|AK100907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
29dbj|AK071318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
30dbj|AK064773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
31emb|BX682544.5| Zebrafish DNA sequence from clone CH211-189G6 in... 40 5.5
32gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complet... 40 5.5
33gb|AC005466.5|AC005466 Drosophila melanogaster, chromosome 2R, r... 40 5.5
34gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 5.5
35gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26... 40 5.5
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
38emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.5
39gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s... 40 5.5
40dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.5 
>dbj|AK069590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019I11, full
           insert sequence
          Length = 1482

 Score =  305 bits (154), Expect = 6e-80
 Identities = 300/348 (86%), Gaps = 3/348 (0%)
 Strand = Plus / Plus

                                                                       
Query: 63  aatcccgacgaggtcgtgctcggtcaggagatcaacggcgcgagggtggtcaccctcaac 122
           |||||||||||||| |||||||| ||||||| |  ||||||||||||||  | |||||||
Sbjct: 193 aatcccgacgaggtggtgctcgggcaggagaccggcggcgcgagggtggcgatcctcaac 252

                                                                       
Query: 123 cgcccgcgccagctcaacggcatcaacgacagagtggtatatctcctagcgcagctcttg 182
           || ||||||||||| |||| ||||  ||| |||||||| |||||||| || ||| |||||
Sbjct: 253 cggccgcgccagctgaacgtcatctccgatagagtggtgtatctcctcgcccagttcttg 312

                                                                       
Query: 183 gagaaatgggagaaagatgacgatgccaagctggtcatcttcaagggagcaggacgagca 242
           ||||  |||||||||||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct: 313 gagagctgggagaaagatgaggatgccaagctggtcatcttcaagggggctggacgtgca 372

                                                                       
Query: 243 ttttctgctggcggggacctaaagatgttctacgaagggagatcatcagatgattcctgc 302
           ||||| ||||| ||||| |||||||||||||| ||||   ||  ||||||||| ||||| 
Sbjct: 373 ttttccgctggtggggatctaaagatgttctatgaag---gaaaatcagatgactcctgt 429

                                                                       
Query: 303 ctcgaggtcgtgtataggatgtactggctctgctatcacatccatacatacaagaaaacc 362
           |||||||| || || |||||||| ||||| ||||| || ||||| || || |||||||||
Sbjct: 430 ctcgaggttgtttacaggatgtattggctttgctaccatatccacacgtataagaaaacc 489

                                                           
Query: 363 acggtggctcttgttaatggacttgtcatgggtggaggtgcggccatg 410
            |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 490 gcggtggctcttgttaatggacttgtcatgggtggtggtgcagccatg 537
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>ref|NM_191252.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 411

 Score =  161 bits (81), Expect = 2e-36
 Identities = 144/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 63  aatcccgacgaggtcgtgctcggtcaggagatcaacggcgcgagggtggtcaccctcaac 122
           |||||||||||||| |||||||| ||||||| |  ||||||||||||||  | |||||||
Sbjct: 34  aatcccgacgaggtggtgctcgggcaggagaccggcggcgcgagggtggcgatcctcaac 93

                                                                       
Query: 123 cgcccgcgccagctcaacggcatcaacgacagagtggtatatctcctagcgcagctcttg 182
           || ||||||||||| |||| ||||  ||| |||||||| |||||||| || ||| |||||
Sbjct: 94  cggccgcgccagctgaacgtcatctccgatagagtggtgtatctcctcgcccagttcttg 153

                                                        
Query: 183 gagaaatgggagaaagatgacgatgccaagctggtcatcttcaag 227
           ||||  |||||||||||||| ||||||||||||||||||||||||
Sbjct: 154 gagagctgggagaaagatgaggatgccaagctggtcatcttcaag 198
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                            
Query: 162      tatctcctagcgcagctcttggagaaatgggagaaagatgacgatgccaagctggtcatc 221
                |||||||| || ||| |||||||||  |||||||||||||| ||||||||||||||||||
Sbjct: 31549611 tatctcctcgcccagttcttggagagctgggagaaagatgaggatgccaagctggtcatc 31549552

                       
Query: 222      ttcaagg 228
                |||||||
Sbjct: 31549551 ttcaagg 31549545



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 365      ggtggctcttgttaatggacttgtcatgggtggaggtgcggccatg 410
                ||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 31548726 ggtggctcttgttaatggacttgtcatgggtggtggtgcagccatg 31548681



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                            
Query: 73       aggtcgtgctcggtcaggagatcaacggcgcgagggtggtcaccctcaaccgcccgcgcc 132
                |||| |||||||| ||||||| |  ||||||||||||||  | ||||||||| |||||||
Sbjct: 31549797 aggtggtgctcgggcaggagaccggcggcgcgagggtggcgatcctcaaccggccgcgcc 31549738

                                            
Query: 133      agctcaacggcatcaacgacagagtggt 160
                |||| |||| ||||  ||| ||||||||
Sbjct: 31549737 agctgaacgtcatctccgatagagtggt 31549710



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 234      ggacgagcattttctgctggcggggacctaaagatgttctacgaagg 280
                ||||| |||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 31549089 ggacgtgcattttccgctggtggggatctaaagatgttctatgaagg 31549043
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435B05
          Length = 150997

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 162   tatctcctagcgcagctcttggagaaatgggagaaagatgacgatgccaagctggtcatc 221
             |||||||| || ||| |||||||||  |||||||||||||| ||||||||||||||||||
Sbjct: 62634 tatctcctcgcccagttcttggagagctgggagaaagatgaggatgccaagctggtcatc 62575

                    
Query: 222   ttcaagg 228
             |||||||
Sbjct: 62574 ttcaagg 62568



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 365   ggtggctcttgttaatggacttgtcatgggtggaggtgcggccatg 410
             ||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 61749 ggtggctcttgttaatggacttgtcatgggtggtggtgcagccatg 61704



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                         
Query: 73    aggtcgtgctcggtcaggagatcaacggcgcgagggtggtcaccctcaaccgcccgcgcc 132
             |||| |||||||| ||||||| |  ||||||||||||||  | ||||||||| |||||||
Sbjct: 62820 aggtggtgctcgggcaggagaccggcggcgcgagggtggcgatcctcaaccggccgcgcc 62761

                                         
Query: 133   agctcaacggcatcaacgacagagtggt 160
             |||| |||| ||||  ||| ||||||||
Sbjct: 62760 agctgaacgtcatctccgatagagtggt 62733



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 234   ggacgagcattttctgctggcggggacctaaagatgttctacgaagg 280
             ||||| |||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 62112 ggacgtgcattttccgctggtggggatctaaagatgttctatgaagg 62066
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>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046E05
          Length = 162776

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                          
Query: 162    tatctcctagcgcagctcttggagaaatgggagaaagatgacgatgccaagctggtcatc 221
              |||||||| || ||| |||||||||  |||||||||||||| ||||||||||||||||||
Sbjct: 143675 tatctcctcgcccagttcttggagagctgggagaaagatgaggatgccaagctggtcatc 143616

                     
Query: 222    ttcaagg 228
              |||||||
Sbjct: 143615 ttcaagg 143609



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                            
Query: 365    ggtggctcttgttaatggacttgtcatgggtggaggtgcggccatg 410
              ||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 142790 ggtggctcttgttaatggacttgtcatgggtggtggtgcagccatg 142745



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                          
Query: 73     aggtcgtgctcggtcaggagatcaacggcgcgagggtggtcaccctcaaccgcccgcgcc 132
              |||| |||||||| ||||||| |  ||||||||||||||  | ||||||||| |||||||
Sbjct: 143861 aggtggtgctcgggcaggagaccggcggcgcgagggtggcgatcctcaaccggccgcgcc 143802

                                          
Query: 133    agctcaacggcatcaacgacagagtggt 160
              |||| |||| ||||  ||| ||||||||
Sbjct: 143801 agctgaacgtcatctccgatagagtggt 143774



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 234    ggacgagcattttctgctggcggggacctaaagatgttctacgaagg 280
              ||||| |||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 143153 ggacgtgcattttccgctggtggggatctaaagatgttctatgaagg 143107
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>ref|NM_100534.2| Arabidopsis thaliana 3-hydroxyisobutyryl-CoA hydrolase/ catalytic
           AT1G06550 mRNA, complete cds
          Length = 1344

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 294 gattcctgcctcgaggtcgtgtataggatgtactggctctgctatcacatccatacatac 353
           ||||| ||||| ||||| || ||  ||||||||||||| || ||||| ||||| ||||||
Sbjct: 253 gattcttgccttgaggttgtttaccggatgtactggctgtgttatcatatccacacatac 312

                                                             
Query: 354 aagaaaaccacggtggctcttgttaatggacttgtcatgggtggaggtgc 403
           ||||| ||   |||| |||| ||||||||| |    ||||||||||||||
Sbjct: 313 aagaagacgcaggtgtctctggttaatggaatatcgatgggtggaggtgc 362
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>dbj|AK221578.1| Arabidopsis thaliana mRNA for 3-hydroxyisobutyryl-coenzyme A
           hydrolase, complete cds, clone: RAFL07-83-C04
          Length = 1437

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 294 gattcctgcctcgaggtcgtgtataggatgtactggctctgctatcacatccatacatac 353
           ||||| ||||| ||||| || ||  ||||||||||||| || ||||| ||||| ||||||
Sbjct: 310 gattcttgccttgaggttgtttaccggatgtactggctgtgttatcatatccacacatac 369

                                                             
Query: 354 aagaaaaccacggtggctcttgttaatggacttgtcatgggtggaggtgc 403
           ||||| ||   |||| |||| ||||||||| |    ||||||||||||||
Sbjct: 370 aagaagacgcaggtgtctctggttaatggaatatcgatgggtggaggtgc 419
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>gb|BT022051.1| Arabidopsis thaliana At1g06550 gene, complete cds
          Length = 1343

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 294 gattcctgcctcgaggtcgtgtataggatgtactggctctgctatcacatccatacatac 353
           ||||| ||||| ||||| || ||  ||||||||||||| || ||||| ||||| ||||||
Sbjct: 268 gattcttgccttgaggttgtttaccggatgtactggctgtgttatcatatccacacatac 327

                                                             
Query: 354 aagaaaaccacggtggctcttgttaatggacttgtcatgggtggaggtgc 403
           ||||| ||   |||| |||| ||||||||| |    ||||||||||||||
Sbjct: 328 aagaagacgcaggtgtctctggttaatggaatatcgatgggtggaggtgc 377
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>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
             complete sequence
          Length = 93724

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 289   cagatgattcctgcctcgaggtcgtgtataggatgtactggctctgctatcacatccata 348
             |||| ||||| ||||| ||||| || ||  ||||||||||||| || ||||| ||||| |
Sbjct: 48047 cagaggattcttgccttgaggttgtttaccggatgtactggctgtgttatcatatccaca 48106

                       
Query: 349   catacaagaa 358
             ||||||||||
Sbjct: 48107 catacaagaa 48116
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 367     tggctcttgttaatggacttgt 388
               ||||||||||||||||||||||
Sbjct: 1419726 tggctcttgttaatggacttgt 1419747
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>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
             sequence
          Length = 252953

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   gaaatgggagaaagatgacgat 206
             ||||||||||||||||||||||
Sbjct: 74756 gaaatgggagaaagatgacgat 74735
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>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5, complete
              sequence
          Length = 188660

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 180    ttggagaaatgggagaaagat 200
              |||||||||||||||||||||
Sbjct: 155679 ttggagaaatgggagaaagat 155699
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>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete
              sequence
          Length = 178731

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 333    tgctatcacatccatacatacaaga 357
              ||||||||||| |||||||||||||
Sbjct: 139129 tgctatcacatgcatacatacaaga 139153
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>ref|NM_197847.1| Oryza sativa (japonica cultivar-group) putative enoyl-CoA-hydratase
           (OSJNBa0003O19.10), mRNA
          Length = 580

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 tggacttgtcatgggtggaggtgc 403
           |||| |||||||||||||||||||
Sbjct: 342 tggaattgtcatgggtggaggtgc 365
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>gb|BC116469.1| Danio rerio cDNA clone MGC:136239 IMAGE:7241914, complete cds
          Length = 2350

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   cgtgctcggtcaggagatca 96
            ||||||||||||||||||||
Sbjct: 1016 cgtgctcggtcaggagatca 997
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>ref|XM_957507.1| Neurospora crassa OR74A hypothetical protein (NCU06960.1) partial
           mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 111 gtcaccctcaaccgcccgcgccagctcaacggcatc 146
           ||||| ||||||||||||  ||||||||||| ||||
Sbjct: 88  gtcacgctcaaccgcccggcccagctcaacgccatc 123
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>ref|XM_327245.1| Neurospora crassa OR74A hypothetical protein (NCU06960.1) partial
           mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 111 gtcaccctcaaccgcccgcgccagctcaacggcatc 146
           ||||| ||||||||||||  ||||||||||| ||||
Sbjct: 88  gtcacgctcaaccgcccggcccagctcaacgccatc 123
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>gb|AC016769.10| Homo sapiens BAC clone RP11-561N12 from 7, complete sequence
          Length = 203572

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aaatctgcagctccagattc 41
             ||||||||||||||||||||
Sbjct: 47357 aaatctgcagctccagattc 47338
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>gb|AC182637.3| Pan troglodytes BAC clone CH251-431A15 from chromosome 7, complete
              sequence
          Length = 186750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     aaatctgcagctccagattc 41
              ||||||||||||||||||||
Sbjct: 112793 aaatctgcagctccagattc 112812
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>gb|AY122187.1| Drosophila melanogaster LD43341 full insert cDNA
          Length = 2873

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 364  cggtggctcttgttaatggacttg 387
            |||||||||||||| |||||||||
Sbjct: 2152 cggtggctcttgttcatggacttg 2129
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>ref|NM_165852.1| Drosophila melanogaster MCPH1 CG8981-RA, transcript variant A
            (MCPH1), mRNA
          Length = 3037

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 364  cggtggctcttgttaatggacttg 387
            |||||||||||||| |||||||||
Sbjct: 2353 cggtggctcttgttcatggacttg 2330
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>ref|NM_136867.1| Drosophila melanogaster MCPH1 CG8981-RB, transcript variant B
            (MCPH1), mRNA
          Length = 2836

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 364  cggtggctcttgttaatggacttg 387
            |||||||||||||| |||||||||
Sbjct: 2152 cggtggctcttgttcatggacttg 2129
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>gb|AC009351.7| Drosophila melanogaster, chromosome 2L, region 26A-26A, BAC clone
             BACR23K01, complete sequence
          Length = 173723

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aatctgcagctccagattcg 42
             ||||||||||||||||||||
Sbjct: 83722 aatctgcagctccagattcg 83703
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 380     tggacttgtcatgggtggaggtgc 403
               |||| |||||||||||||||||||
Sbjct: 9358178 tggaattgtcatgggtggaggtgc 9358201
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 380      tggacttgtcatgggtggaggtgc 403
                |||| |||||||||||||||||||
Sbjct: 22218027 tggaattgtcatgggtggaggtgc 22218004
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>gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
             BACR14L19, complete sequence
          Length = 192763

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 364   cggtggctcttgttaatggacttg 387
             |||||||||||||| |||||||||
Sbjct: 15247 cggtggctcttgttcatggacttg 15270
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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   tggacttgtcatgggtggaggtgc 403
             |||| |||||||||||||||||||
Sbjct: 35270 tggaattgtcatgggtggaggtgc 35247
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>dbj|AK100907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F01, full
           insert sequence
          Length = 2189

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 tggacttgtcatgggtggaggtgc 403
           |||| |||||||||||||||||||
Sbjct: 881 tggaattgtcatgggtggaggtgc 904
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>dbj|AK071318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086L03, full
           insert sequence
          Length = 2049

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 tggacttgtcatgggtggaggtgc 403
           |||| |||||||||||||||||||
Sbjct: 742 tggaattgtcatgggtggaggtgc 765
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>dbj|AK064773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A22, full
            insert sequence
          Length = 3746

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 380  tggacttgtcatgggtggaggtgc 403
            |||| |||||||||||||||||||
Sbjct: 1498 tggaattgtcatgggtggaggtgc 1521
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>emb|BX682544.5| Zebrafish DNA sequence from clone CH211-189G6 in linkage group 20,
             complete sequence
          Length = 163093

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cgtgctcggtcaggagatca 96
             ||||||||||||||||||||
Sbjct: 30323 cgtgctcggtcaggagatca 30304
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>gb|CP000004.1| Gluconobacter oxydans 621H plasmid pGOX1, complete sequence
          Length = 163186

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   ggagaaagatgacgatgccaagct 214
             ||||||||||||||||||| ||||
Sbjct: 41178 ggagaaagatgacgatgccgagct 41155
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>gb|AC005466.5|AC005466 Drosophila melanogaster, chromosome 2R, region 48C2-48C5, P1 clone
             DS03299, complete sequence
          Length = 72986

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 364   cggtggctcttgttaatggacttg 387
             |||||||||||||| |||||||||
Sbjct: 41850 cggtggctcttgttcatggacttg 41873
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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
              sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aatctgcagctccagattcg 42
              ||||||||||||||||||||
Sbjct: 256819 aatctgcagctccagattcg 256800
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>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete
              sequence
          Length = 268836

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    cggtggctcttgttaatggacttg 387
              |||||||||||||| |||||||||
Sbjct: 170591 cggtggctcttgttcatggacttg 170614
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 380      tggacttgtcatgggtggaggtgc 403
                |||| |||||||||||||||||||
Sbjct: 22230095 tggaattgtcatgggtggaggtgc 22230072
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 380     tggacttgtcatgggtggaggtgc 403
               |||| |||||||||||||||||||
Sbjct: 9358063 tggaattgtcatgggtggaggtgc 9358086
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>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 190718

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   tggacttgtcatgggtggaggtgc 403
             |||| |||||||||||||||||||
Sbjct: 80877 tggaattgtcatgggtggaggtgc 80854
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>gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s DS00121 (D128), DS05470
            (D270), and DS00108 (D120)), complete sequence
          Length = 209071

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   aatctgcagctccagattcg 42
            ||||||||||||||||||||
Sbjct: 9551 aatctgcagctccagattcg 9532
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>dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304,
             complete sequence
          Length = 114776

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ctcaacaacaacccaatccc 68
             ||||||||||||||||||||
Sbjct: 83918 ctcaacaacaacccaatccc 83937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,661,463
Number of Sequences: 3902068
Number of extensions: 3661463
Number of successful extensions: 90391
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90222
Number of HSP's gapped (non-prelim): 168
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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