>ref|XM_528641.1| PREDICTED: Pan troglodytes similar to zinc finger protein 91 (HPF7,
            HTF10) (LOC473271), mRNA
          Length = 3057

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 229  cgcagcacgcctcgcacacattgcagcagagg 260
            |||||||||||| ||||||| |||||||||||
Sbjct: 1103 cgcagcacgcctggcacacagtgcagcagagg 1072

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 508     cgccagcgtcggcaccagcgccgat 532
               |||||||||||||| ||||||||||
Sbjct: 1345863 cgccagcgtcggcagcagcgccgat 1345887

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 504      ccggcgccagcgtcggcacca 524
                |||||||||||||||||||||
Sbjct: 22387643 ccggcgccagcgtcggcacca 22387623

>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 504   ccggcgccagcgtcggcacca 524
             |||||||||||||||||||||
Sbjct: 84626 ccggcgccagcgtcggcacca 84606

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 508     cgccagcgtcggcaccagcgccgat 532
               |||||||||||||| ||||||||||
Sbjct: 1369450 cgccagcgtcggcagcagcgccgat 1369474

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 507     gcgccagcgtcggcaccagcg 527
               |||||||||||||||||||||
Sbjct: 4137641 gcgccagcgtcggcaccagcg 4137621

>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence
          Length = 193961

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 250   tgcagcagaggatgatcatcaatga 274
             ||||||||||||||| |||||||||
Sbjct: 32574 tgcagcagaggatgaacatcaatga 32550

>emb|AL645508.14| Mouse DNA sequence from clone RP23-170H12 on chromosome 4, complete
              sequence
          Length = 207485

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    agcagaggatgatcatcaatg 273
              |||||||||||||||||||||
Sbjct: 101920 agcagaggatgatcatcaatg 101900

>gb|AC006366.4| Homo sapiens BAC clone RP11-86G22 from Y, complete sequence
          Length = 166458

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    tgcaagaagataaaagagat 481
              ||||||||||||||||||||
Sbjct: 102060 tgcaagaagataaaagagat 102079

>gb|AC147669.4| Pan troglodytes BAC clone CH251-71E10 from Y, complete sequence
          Length = 151872

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgcaagaagataaaagagat 481
             ||||||||||||||||||||
Sbjct: 93017 tgcaagaagataaaagagat 93036

>gb|AC147664.2| Pan troglodytes BAC clone CH251-238C14 from Y, complete sequence
          Length = 159873

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    tgcaagaagataaaagagat 481
              ||||||||||||||||||||
Sbjct: 155768 tgcaagaagataaaagagat 155787

>gb|AC146230.2| Pan troglodytes BAC clone CH251-228B19 from Y, complete sequence
          Length = 179896

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 462  tgcaagaagataaaagagat 481
            ||||||||||||||||||||
Sbjct: 9971 tgcaagaagataaaagagat 9990

>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence
          Length = 225376

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    tggagattggtaggatgttc 197
              ||||||||||||||||||||
Sbjct: 107226 tggagattggtaggatgttc 107207

>gb|AC146243.2| Pan troglodytes BAC clone CH251-166E5 from Y, complete sequence
          Length = 161714

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    tgcaagaagataaaagagat 481
              ||||||||||||||||||||
Sbjct: 159359 tgcaagaagataaaagagat 159378

>gb|AC142346.1| Pan troglodytes BAC clone RP43-2A2 from Y, complete sequence
          Length = 162911

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgcaagaagataaaagagat 481
             ||||||||||||||||||||
Sbjct: 93012 tgcaagaagataaaagagat 93031

>gb|AC142332.1| Pan troglodytes BAC clone RP43-31L22 from Y, complete sequence
          Length = 153093

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tgcaagaagataaaagagat 481
            ||||||||||||||||||||
Sbjct: 2357 tgcaagaagataaaagagat 2338

>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ctatccagagaagcctccgc 216
              ||||||||||||||||||||
Sbjct: 136606 ctatccagagaagcctccgc 136587

>emb|AL122008.28|HSJ799P18 Human DNA sequence from clone RP4-799P18 on chromosome 1q42.2-43
             Contains the 3' end of the SLC35F3 gene for solute carrier
             family 35 member F3, two novel genes and three CpG
             islands, complete sequence
          Length = 144407

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    gtctgtgagggagcacaccaaggc 52
             ||||||||| ||||||||||||||
Sbjct: 89255 gtctgtgagtgagcacaccaaggc 89278

>gb|DQ397625.1| Cenarchaeum symbiosum clone C20B06, complete sequence
          Length = 45713

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  gaagtcgtcttggacaagct 433
            ||||||||||||||||||||
Sbjct: 1278 gaagtcgtcttggacaagct 1259

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 462      tgcaagaagataaaagagat 481
                ||||||||||||||||||||
Sbjct: 11023721 tgcaagaagataaaagagat 11023702



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     tgcaagaagataaaagagat 481
               ||||||||||||||||||||
Sbjct: 3055599 tgcaagaagataaaagagat 3055580

>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete
             sequence
          Length = 129585

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   acttgcaagaagataaaaga 478
             ||||||||||||||||||||
Sbjct: 74250 acttgcaagaagataaaaga 74231

>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 197     ctatccagagaagcctccgc 216
               ||||||||||||||||||||
Sbjct: 1030970 ctatccagagaagcctccgc 1030989

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 459      acttgcaagaagataaaaga 478
                ||||||||||||||||||||
Sbjct: 17986783 acttgcaagaagataaaaga 17986802

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     gaaatcaactgcagcatcaa 130
               ||||||||||||||||||||
Sbjct: 5295958 gaaatcaactgcagcatcaa 5295939

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 189      aggatgttctatccagagaa 208
                ||||||||||||||||||||
Sbjct: 26067636 aggatgttctatccagagaa 26067617

>gb|AC048330.20| Homo sapiens 12 BAC RP11-334L2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188719

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgttctatccagagaagcct 212
             ||||||||||||||||||||
Sbjct: 98348 tgttctatccagagaagcct 98367

>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0707D10
          Length = 172003

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    aggatgttctatccagagaa 208
              ||||||||||||||||||||
Sbjct: 163703 aggatgttctatccagagaa 163684

>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0038D11
          Length = 156465

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   aggatgttctatccagagaa 208
             ||||||||||||||||||||
Sbjct: 71211 aggatgttctatccagagaa 71192

>gb|AC010153.3|AC010153 Homo sapiens BAC clone RP11-535I13 from Y, complete sequence
          Length = 104147

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   tgcaagaagataaaagagat 481
             ||||||||||||||||||||
Sbjct: 12810 tgcaagaagataaaagagat 12791

>gb|AC016728.4|AC016728 Homo sapiens BAC clone RP11-363G6 from Y, complete sequence
          Length = 152052

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgcaagaagataaaagagat 481
             ||||||||||||||||||||
Sbjct: 92690 tgcaagaagataaaagagat 92709

>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 462     tgcaagaagataaaagagat 481
               ||||||||||||||||||||
Sbjct: 3299160 tgcaagaagataaaagagat 3299179



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     tgcaagaagataaaagagat 481
               ||||||||||||||||||||
Sbjct: 2749168 tgcaagaagataaaagagat 2749149



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     tgcaagaagataaaagagat 481
               ||||||||||||||||||||
Sbjct: 1115415 tgcaagaagataaaagagat 1115396

>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     ctatccagagaagcctccgc 216
               ||||||||||||||||||||
Sbjct: 1040472 ctatccagagaagcctccgc 1040453

>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     ctatccagagaagcctccgc 216
               ||||||||||||||||||||
Sbjct: 1039793 ctatccagagaagcctccgc 1039774

>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0015B15
          Length = 123083

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gaaatcaactgcagcatcaa 130
             ||||||||||||||||||||
Sbjct: 37470 gaaatcaactgcagcatcaa 37451

>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gaaatcaactgcagcatcaa 130
              ||||||||||||||||||||
Sbjct: 162680 gaaatcaactgcagcatcaa 162661

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 459      acttgcaagaagataaaaga 478
                ||||||||||||||||||||
Sbjct: 17996036 acttgcaagaagataaaaga 17996055

>emb|AL607132.11| Mouse DNA sequence from clone RP23-97J2 on chromosome 4, complete
             sequence
          Length = 183108

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   cttgtttggcagccggcgcc 511
             ||||||||||||||||||||
Sbjct: 37868 cttgtttggcagccggcgcc 37887


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,157,950
Number of Sequences: 3902068
Number of extensions: 4157950
Number of successful extensions: 78581
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77991
Number of HSP's gapped (non-prelim): 590
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)