ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20g08 |
|---|---|
| Clone Library Name | barley_pub |
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 51.6 bits (122), Expect = 6e-07 Identities = 23/46 (50%), Positives = 35/46 (76%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG G A TFI+ E+E+YA + KAL++S+Q VP++L+ LA +F+ Sbjct: 761 RAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLASQFL 806
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 51.2 bits (121), Expect = 8e-07 Identities = 22/46 (47%), Positives = 34/46 (73%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG KG TFI+ E+ER++ +V+ALE S+ +P+DLK ++D F+ Sbjct: 749 RAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDLKKMSDSFL 794
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 51.2 bits (121), Expect = 8e-07 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG KG A TFI+E++ RYA ++KALELS AVP DL+ L F Sbjct: 712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 51.2 bits (121), Expect = 8e-07 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG KG A TFI+E++ RYA ++KALELS AVP DL+ L F Sbjct: 712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 51.2 bits (121), Expect = 8e-07 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG KG A TFI+E++ RYA ++KALELS AVP DL+ L F Sbjct: 712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 51.2 bits (121), Expect = 8e-07 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG KG A TFI+E++ RYA ++KALELS AVP DL+ L F Sbjct: 712 RAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 48.1 bits (113), Expect = 7e-06 Identities = 21/46 (45%), Positives = 33/46 (71%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG G A TF++E++ERY+ + KAL+ S Q+VPE ++ + D F+ Sbjct: 899 RAGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVDSFL 944
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 48.1 bits (113), Expect = 7e-06 Identities = 22/46 (47%), Positives = 31/46 (67%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG G A TF++EE+ERY+ + KAL S Q VPE ++ + D F+ Sbjct: 920 RAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDSFL 965
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 47.8 bits (112), Expect = 9e-06 Identities = 22/46 (47%), Positives = 32/46 (69%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG G A TF++E++ERY+ + KAL+ S Q VPE ++ L D F+ Sbjct: 886 RAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLVDSFL 931
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG KG A TFI+E + RY+ ++KALELS +VP +L+ L F Sbjct: 680 RAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQLWTNF 724
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/45 (46%), Positives = 31/45 (68%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG+KG TFI+ E++RYA ++ AL+ S VP +L+A+A F Sbjct: 820 RAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPELEAMAASF 864
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 42.4 bits (98), Expect = 4e-04 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADR 132 RAG G A TF S+++ ++A LVK LE + Q VP +L+ +A R Sbjct: 482 RAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASR 525
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 41.2 bits (95), Expect = 8e-04 Identities = 21/41 (51%), Positives = 26/41 (63%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKAL 123 RAG G A TFI+EE+E A + KALE S Q VP+ L + Sbjct: 904 RAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRLNEM 944
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 41.2 bits (95), Expect = 8e-04 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKAL 123 RAG G A TF++ E+E AP + KALE S Q +P+ L + Sbjct: 940 RAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRLNEM 980
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/45 (40%), Positives = 30/45 (66%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAGR G + T ++ + R A L+ LE + Q++PE+L ++A+RF Sbjct: 580 RAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAERF 624
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/45 (35%), Positives = 30/45 (66%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 R G+ G + T I++ + + A L+K L+ + Q+VPEDL +A+++ Sbjct: 560 RTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVMAEQY 604
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 38.5 bits (88), Expect = 0.005 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFMS 141 RAG KG A TF+S + + LVKAL+LS + L+ +A++F++ Sbjct: 649 RAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEIANKFVT 695
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 38.1 bits (87), Expect = 0.007 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRF 135 RAG+KG A TF+ ++ER A + +A++ S A P ++ + +RF Sbjct: 757 RAGQKGTALTFLLSDQERLAAEISRAIKSSGNAPPAPVQLMTERF 801
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 35.8 bits (81), Expect = 0.034 Identities = 18/36 (50%), Positives = 24/36 (66%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPE 108 RAGRKG A TF+S ++ R LVKA+ LS+ + E Sbjct: 669 RAGRKGTAITFVSSKQGRAITDLVKAMRLSKVSEDE 704
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 35.8 bits (81), Expect = 0.034 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A T +E+E+ A LV L + Q VPEDL Sbjct: 469 RAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 506
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 35.8 bits (81), Expect = 0.034 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A T +E+E+ A LV L + Q VPEDL Sbjct: 452 RAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDL 489
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 35.4 bits (80), Expect = 0.044 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLK 117 RAG+ G A T +E+E+ A LV L + Q VPE+LK Sbjct: 433 RAGQYGTAHTLFTEQEKHLAGALVNVLNGAGQPVPEELK 471
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 34.7 bits (78), Expect = 0.075 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A TF + E++ ++ LV L + Q VPEDL Sbjct: 510 RAGKTGQAITFFTVEDKSHSGSLVNILRGANQPVPEDL 547
>LNT_CHLTR (O84539) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 542 Score = 33.5 bits (75), Expect = 0.17 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%) Frame = -1 Query: 120 GFQVLWNGLFR*LQSLN--KVWCIAFLF 43 G+ +LW GLF ++ L+ KVWCIAF++ Sbjct: 34 GYSLLWAGLFALVEQLSWKKVWCIAFIW 61
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 33.1 bits (74), Expect = 0.22 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG G A T +E+E+ A LV L + Q VPE+L Sbjct: 464 RAGATGVAHTLFTEQEKHLAGALVNVLNGAGQPVPEEL 501
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 32.7 bits (73), Expect = 0.28 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A T +E ++ ++ LV L ++Q VPE+L Sbjct: 543 RAGKLGKAITLFTEHDKAHSGSLVNILRAAKQPVPEEL 580
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 32.7 bits (73), Expect = 0.28 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG KG A T +E+E+ + L L + Q VPE+L Sbjct: 493 RAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEEL 530
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 32.3 bits (72), Expect = 0.37 Identities = 15/42 (35%), Positives = 26/42 (61%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALA 126 RAGRKG + T+ + + + A LV+ L S+ +P +L+ +A Sbjct: 449 RAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 32.0 bits (71), Expect = 0.48 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG +G A T +E ++ + L+ L ++Q +PEDL Sbjct: 426 RAGAEGHAVTLFTETDKAQSGALINVLRAAKQDIPEDL 463
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A T +E E+ + L+ L ++Q VP++L Sbjct: 461 RAGKTGQAITLFTEHEKHLSGALINVLRGADQPVPDEL 498
>ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 547 Score = 31.2 bits (69), Expect = 0.83 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALA 126 RAGR G A TF ++E+ +V ++ S Q VP+ L LA Sbjct: 457 RAGRLGKAVTFFTKEDATNVKVVVNVMKQSGQEVPDWLNNLA 498
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 30.8 bits (68), Expect = 1.1 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLK 117 RAG G A +F +E + L+K + ++Q +PE+L+ Sbjct: 453 RAGSTGTAISFFTEGNKSLGAALIKIMREAKQDIPEELR 491
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 30.4 bits (67), Expect = 1.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG+ G A T +E E+ + L+ L + Q VP++L Sbjct: 456 RAGQTGIAHTLFTEHEKHLSGALMNVLRGANQPVPDEL 493
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 30.0 bits (66), Expect = 1.8 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEER-YAPXLVKALELSEQAVPEDLK 117 R G G A +F E++R A LVK LE S Q VP+ L+ Sbjct: 582 RVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLR 621
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 29.6 bits (65), Expect = 2.4 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG G A +F +E+ + L+ + ++Q +PE+L Sbjct: 450 RAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEEL 487
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 29.3 bits (64), Expect = 3.1 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALAD 129 R+ KG A TF + + A L+K LE + QA+ L L D Sbjct: 432 RSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 29.3 bits (64), Expect = 3.1 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALAD 129 R+ KG A TF + + A L+K LE + QA+ L L D Sbjct: 432 RSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 28.9 bits (63), Expect = 4.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG G A T +E ++ + L+ L+ + Q VPE L Sbjct: 416 RAGADGHAITLFTETDKAQSGALINVLKAANQEVPEAL 453
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 28.9 bits (63), Expect = 4.1 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDL 114 RAG G A +F +E + L+ + ++Q +P+DL Sbjct: 454 RAGATGTAISFFTEANKTLGAQLISIMREAKQEIPQDL 491
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALA 126 R GRKG A FI+ EE + K + + +P D+ +L+ Sbjct: 357 RFGRKGVAINFITREEVTKLKSIEKHYSIKIKPMPADIDSLS 398
>HSP70_MIMIV (Q5UQ49) Heat shock 70 kDa protein| Length = 634 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -2 Query: 140 DINRSAKAFRSSGTACSDSSKALT 69 D+N+SAKA R TAC + +AL+ Sbjct: 252 DLNQSAKALRRLRTACERAKRALS 275
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 27.7 bits (60), Expect = 9.1 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLKALADRFM 138 RAG G A F + + L++ L+ + Q VP+ L+A+A M Sbjct: 543 RAGNVGHATAFFNRGNKNIVRDLIELLKEANQEVPQWLEAVARESM 588
>LNT_CHLMU (Q9PJK8) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 542 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -1 Query: 120 GFQVLWNGLFR*LQSLN--KVWCIAFLF 43 G+ +LW GL + S + K+WC+AF + Sbjct: 34 GYGLLWRGLLSLVDSSSWRKIWCLAFFW 61
>DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 599 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +1 Query: 1 RAGRKGCAXTFISEEEERYAPXLVKALELSEQAVPEDLK 117 RAG KG A TF +E+++ + ++ + VPE +K Sbjct: 505 RAGNKGKAITFFTEDDKPLLRSVANVIQQAGCPVPEYIK 543 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.131 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,019,087 Number of Sequences: 219361 Number of extensions: 217499 Number of successful extensions: 660 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 655 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 659 length of database: 80,573,946 effective HSP length: 22 effective length of database: 75,748,004 effective search space used: 1817952096 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
