>ref|XM_480203.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3681

 Score =  127 bits (64), Expect = 9e-27
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    cgtgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgca 60
            |||||||| |||||||| | ||||| |||||||||||| ||||||||||| || ||||| 
Sbjct: 2343 cgtgctgggaggaagggatttgccgtgacttttatttctgaggaagaggagcgttatgct 2402

                                                                      
Query: 61   ccanaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaag 118
            ||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 2403 ccagaccttgttaaagctttggagctctcagagcaggctgttccagaggacctgaaag 2460

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  127 bits (64), Expect = 9e-27
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                           
Query: 1       cgtgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgca 60
               |||||||| |||||||| | ||||| |||||||||||| ||||||||||| || ||||| 
Sbjct: 3510046 cgtgctgggaggaagggatttgccgtgacttttatttctgaggaagaggagcgttatgct 3509987

                                                                         
Query: 61      ccanaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaag 118
               ||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 3509986 ccagaccttgttaaagctttggagctctcagagcaggctgttccagaggacctgaaag 3509929



 Score =  109 bits (55), Expect = 2e-21
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                           
Query: 3       tgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgcacc 62
               ||||||||||||||||| ||| | |||||||||||| || |||||||| || ||||||||
Sbjct: 3109090 tgctggtaggaagggctttgctgtgacttttatttctgacgaagaggagcggtatgcacc 3109031

                                                                           
Query: 63      anaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaagcctt 122
               | | ||||  |||||| ||||||| ||||||||||| |||||| ||||||| |||| | |
Sbjct: 3109030 agatcttgccaaggctctggagctttctgaacaggctgttccacaggaccttaaaggcct 3108971

                        
Query: 123     agcggatcg 131
               ||| |||||
Sbjct: 3108970 agctgatcg 3108962

>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498E12
          Length = 153523

 Score =  127 bits (64), Expect = 9e-27
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      cgtgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgca 60
              |||||||| |||||||| | ||||| |||||||||||| ||||||||||| || ||||| 
Sbjct: 143465 cgtgctgggaggaagggatttgccgtgacttttatttctgaggaagaggagcgttatgct 143406

                                                                        
Query: 61     ccanaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaag 118
              ||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 143405 ccagaccttgttaaagctttggagctctcagagcaggctgttccagaggacctgaaag 143348

>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0672D01
          Length = 146954

 Score =  127 bits (64), Expect = 9e-27
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1     cgtgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgca 60
             |||||||| |||||||| | ||||| |||||||||||| ||||||||||| || ||||| 
Sbjct: 65763 cgtgctgggaggaagggatttgccgtgacttttatttctgaggaagaggagcgttatgct 65704

                                                                       
Query: 61    ccanaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaag 118
             ||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 65703 ccagaccttgttaaagctttggagctctcagagcaggctgttccagaggacctgaaag 65646

>dbj|AK102356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H10, full
            insert sequence
          Length = 3682

 Score =  127 bits (64), Expect = 9e-27
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    cgtgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgca 60
            |||||||| |||||||| | ||||| |||||||||||| ||||||||||| || ||||| 
Sbjct: 2344 cgtgctgggaggaagggatttgccgtgacttttatttctgaggaagaggagcgttatgct 2403

                                                                      
Query: 61   ccanaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaag 118
            ||| |||||||||| ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 2404 ccagaccttgttaaagctttggagctctcagagcaggctgttccagaggacctgaaag 2461

>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1349_D05
          Length = 174478

 Score =  109 bits (55), Expect = 2e-21
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                          
Query: 3      tgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgcacc 62
              ||||||||||||||||| ||| | |||||||||||| || |||||||| || ||||||||
Sbjct: 159813 tgctggtaggaagggctttgctgtgacttttatttctgacgaagaggagcggtatgcacc 159754

                                                                          
Query: 63     anaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaagcctt 122
              | | ||||  |||||| ||||||| ||||||||||| |||||| ||||||| |||| | |
Sbjct: 159753 agatcttgccaaggctctggagctttctgaacaggctgttccacaggaccttaaaggcct 159694

                       
Query: 123    agcggatcg 131
              ||| |||||
Sbjct: 159693 agctgatcg 159685

>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score =  109 bits (55), Expect = 2e-21
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 3     tgctggtaggaagggctgtgccgngacttttatttccgaggaagaggaacgctatgcacc 62
             ||||||||||||||||| ||| | |||||||||||| || |||||||| || ||||||||
Sbjct: 68574 tgctggtaggaagggctttgctgtgacttttatttctgacgaagaggagcggtatgcacc 68515

                                                                         
Query: 63    anaccttgttaaggctttggagctatctgaacaggccgttccagaggacctgaaagcctt 122
             | | ||||  |||||| ||||||| ||||||||||| |||||| ||||||| |||| | |
Sbjct: 68514 agatcttgccaaggctctggagctttctgaacaggctgttccacaggaccttaaaggcct 68455

                      
Query: 123   agcggatcg 131
             ||| |||||
Sbjct: 68454 agctgatcg 68446

>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence
          Length = 207239

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    tccagaggacctgaaagcctt 122
              |||||||||||||||||||||
Sbjct: 174069 tccagaggacctgaaagcctt 174049

>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195877

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    tccagaggacctgaaagcctt 122
              |||||||||||||||||||||
Sbjct: 194002 tccagaggacctgaaagcctt 194022

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      ggaagaggaacgctatgca 60
               |||||||||||||||||||
Sbjct: 1120068 ggaagaggaacgctatgca 1120050

>gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10, complete sequence
          Length = 154291

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ggaagaggaacgctatgca 60
             |||||||||||||||||||
Sbjct: 50422 ggaagaggaacgctatgca 50440

>ref|XM_819781.1| Trypanosoma brucei TREU927 clone RPCI93-5F10 hypothetical protein
            (Tb927.7.4200) partial mRNA
          Length = 1065

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   ggaagaggaacgctatgca 60
            |||||||||||||||||||
Sbjct: 1031 ggaagaggaacgctatgca 1013

>gb|AC099654.5| Homo sapiens BAC clone RP11-1217F2 from 7, complete sequence
          Length = 149259

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 29     cttttatttccgaggaagaggaa 51
              |||||||||| ||||||||||||
Sbjct: 123265 cttttatttcagaggaagaggaa 123243

>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2,
             complete sequence
          Length = 185706

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    tatttccgaggaagaggaa 51
             |||||||||||||||||||
Sbjct: 54672 tatttccgaggaagaggaa 54690

>emb|AJ336608.1|HSA336608 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OD4R
          Length = 833

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 103 ccagaggacctgaaagcct 121
           |||||||||||||||||||
Sbjct: 730 ccagaggacctgaaagcct 712

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      gaggaagaggaacgctatg 58
               |||||||||||||||||||
Sbjct: 3451856 gaggaagaggaacgctatg 3451838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 963,316
Number of Sequences: 3902068
Number of extensions: 963316
Number of successful extensions: 57186
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57104
Number of HSP's gapped (non-prelim): 82
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)