ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20f01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846822.1| Triticum aestivum ribosomal protein L11 mRNA, complete cds Length = 549 Score = 155 bits (78), Expect = 4e-35 Identities = 123/138 (89%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14 aagaagcagctgaaccccatgcgggacatcaaggtgcagaagctcgtcctcaacatctcc 73 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| |||||||||| ||||||||||| ||||| |||||| | |||||||||||||||| Sbjct: 74 gtcggcgagagcggagatcgcctcacccgcgcctccaaggtgctggagcagctgagcgga 133 Query: 129 cagtcgccagttttctcc 146 ||||| || || |||||| Sbjct: 134 cagtcaccggtgttctcc 151
>dbj|AK120417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093C14, full insert sequence Length = 844 Score = 141 bits (71), Expect = 7e-31 Identities = 110/123 (89%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 149 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| ||||||||||||| ||||| || ||||| |||||| | |||||||||| |||||| Sbjct: 150 gtcggcgagagcggcgaccgcctaacccgcgcctccaaggtgctggagcagctcagcggg 209 Query: 129 cag 131 ||| Sbjct: 210 cag 212
>dbj|AK070605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055B20, full insert sequence Length = 916 Score = 139 bits (70), Expect = 3e-30 Identities = 121/138 (87%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 85 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaacatctcc 144 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| ||||||||||||| | ||||| ||||| |||||| ||||||||||||||| ||| Sbjct: 145 gtcggcgagagcggcgacaggctcacccgcgcctccaaggtgttggagcagctgagtggg 204 Query: 129 cagtcgccagttttctcc 146 ||| |||||||||||| Sbjct: 205 cagagcccagttttctcc 222
>dbj|AK062150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H04, full insert sequence Length = 1584 Score = 139 bits (70), Expect = 3e-30 Identities = 121/138 (87%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 859 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaacatctcc 918 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| ||||||||||||| | ||||| ||||| |||||| ||||||||||||||| ||| Sbjct: 919 gtcggcgagagcggcgacaggctcacccgcgcctccaaggtgttggagcagctgagtggg 978 Query: 129 cagtcgccagttttctcc 146 ||| |||||||||||| Sbjct: 979 cagagcccagttttctcc 996
>ref|NM_188340.1| Oryza sativa (japonica cultivar-group), Ozsa8091 predicted mRNA Length = 549 Score = 135 bits (68), Expect = 4e-29 Identities = 107/120 (89%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 31 atgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagat 90 Query: 87 cgcctcactcgcgctgccaaggagttggagcagctgagcgggcagtcgccagttttctcc 146 |||||||| ||||| | |||| | ||||||||||||| |||||||| || || |||||| Sbjct: 91 cgcctcacccgcgcctcgaaggtgctggagcagctgagtgggcagtcaccggtgttctcc 150
>dbj|AK067763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K02, full insert sequence Length = 875 Score = 135 bits (68), Expect = 4e-29 Identities = 107/120 (89%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 121 atgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagat 180 Query: 87 cgcctcactcgcgctgccaaggagttggagcagctgagcgggcagtcgccagttttctcc 146 |||||||| ||||| | |||| | ||||||||||||| |||||||| || || |||||| Sbjct: 181 cgcctcacccgcgcctcgaaggtgctggagcagctgagtgggcagtcaccggtgttctcc 240
>gb|BT016507.1| Zea mays clone Contig340 mRNA sequence Length = 788 Score = 129 bits (65), Expect = 2e-27 Identities = 122/141 (86%) Strand = Plus / Plus Query: 6 gaaaagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatc 65 |||||||| |||| |||| | ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 21 gaaaagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaatatc 80 Query: 66 tccgtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagc 125 ||||| | ||||| || ||||| ||||| ||||| ||||||| |||||||||| |||| Sbjct: 81 tccgttggagagagtggagatcgactcacccgcgccgccaaggtgttggagcagttgagt 140 Query: 126 gggcagtcgccagttttctcc 146 |||||||| || ||||||||| Sbjct: 141 gggcagtctccggttttctcc 161
>gb|BT017969.1| Zea mays clone EL01N0524A06.c mRNA sequence Length = 796 Score = 129 bits (65), Expect = 2e-27 Identities = 122/141 (86%) Strand = Plus / Minus Query: 6 gaaaagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatc 65 |||||||| |||| |||| | ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 776 gaaaagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaatatc 717 Query: 66 tccgtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagc 125 ||||| | ||||| || ||||| ||||| ||||| ||||||| |||||||||| |||| Sbjct: 716 tccgttggagagagtggagatcgactcacccgcgccgccaaggtgttggagcagttgagt 657 Query: 126 gggcagtcgccagttttctcc 146 |||||||| || ||||||||| Sbjct: 656 gggcagtctccggttttctcc 636
>gb|AY104692.1| Zea mays PCO098395 mRNA sequence Length = 588 Score = 123 bits (62), Expect = 2e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 147 aagaagcagtcgaacccgatgcgggagatgaaggtccagaagctcgtgctcaacatctcc 206 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| |||||||||| ||||||||||| ||||| ||||||| ||||||||||||| || Sbjct: 207 gtcggcgagagcggtgatcgcctcacccgcgccgccaaggtactggagcagctgagtggt 266 Query: 129 cagtcgccagttttctcc 146 ||||| || || |||||| Sbjct: 267 cagtcaccggtattctcc 284
>gb|AF022736.1|AF022736 Oryza sativa ribosomal protein mRNA, complete cds Length = 905 Score = 123 bits (62), Expect = 2e-25 Identities = 119/138 (86%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 67 aagaagcagtcgaacccgatgcgggatatcaaggtgcagaagctcgtgctcaacatctcc 126 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcggg 128 ||| ||||||||||||| | ||||| ||||| |||||| |||||||||||||| ||| Sbjct: 127 gtcggcgagagcggcgacaggctcacccgcgcctccaaggtgttggagcagctgattggg 186 Query: 129 cagtcgccagttttctcc 146 ||| |||||||||||| Sbjct: 187 cagagcccagttttctcc 204
>gb|AY109492.1| Zea mays CL7136_1 mRNA sequence Length = 1162 Score = 121 bits (61), Expect = 6e-25 Identities = 121/141 (85%) Strand = Plus / Plus Query: 6 gaaaagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatc 65 |||||||| |||| |||| | ||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 135 gaaaagaagcagtcgaacccgatgcgcgagatcaaggtgcagaagctcgtgctcaatatc 194 Query: 66 tccgtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttggagcagctgagc 125 ||||| | ||||| || ||||| ||||| ||||| ||||||| |||||||||| |||| Sbjct: 195 tccgttggagagagtggagatcgactcacccgcgccgccaaggtgttggagcagttgagt 254 Query: 126 gggcagtcgccagttttctcc 146 |||||||| || ||||||||| Sbjct: 255 gggcagtctccggttttctcc 275
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 119 bits (60), Expect = 2e-24 Identities = 84/92 (91%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 7676120 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 7676179 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgc 100 ||| ||||||||||||| ||||| || ||||| Sbjct: 7676180 gtcggcgagagcggcgaccgcctaacccgcgc 7676211
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 119 bits (60), Expect = 2e-24 Identities = 84/92 (91%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12385 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 12444 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgc 100 ||| ||||||||||||| ||||| || ||||| Sbjct: 12445 gtcggcgagagcggcgaccgcctaacccgcgc 12476
>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_E05 Length = 101333 Score = 119 bits (60), Expect = 2e-24 Identities = 84/92 (91%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 92880 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 92939 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgc 100 ||| ||||||||||||| ||||| || ||||| Sbjct: 92940 gtcggcgagagcggcgaccgcctaacccgcgc 92971
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 5769295 atgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagat 5769354 Query: 87 cgcctcactcgcgc 100 |||||||| ||||| Sbjct: 5769355 cgcctcacccgcgc 5769368 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Plus Query: 112 tggagcagctgagcgggcagtcgccagttttctcc 146 ||||||||||||| |||||||| || || |||||| Sbjct: 5769816 tggagcagctgagtgggcagtcaccggtgttctcc 5769850
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 115 bits (58), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 93997 atgcgggagatcaaggtgcagaagcttgtcctcaacatctccgtcggcgagagcggagat 94056 Query: 87 cgcctcactcgcgc 100 |||||||| ||||| Sbjct: 94057 cgcctcacccgcgc 94070 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Plus Query: 112 tggagcagctgagcgggcagtcgccagttttctcc 146 ||||||||||||| |||||||| || || |||||| Sbjct: 94518 tggagcagctgagtgggcagtcaccggtgttctcc 94552
>gb|AY104690.1| Zea mays PCO097022 mRNA sequence Length = 836 Score = 113 bits (57), Expect = 1e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 156 atgcgggagatcaaggtgcagaagctggtcctcaacatatccgtaggggagagcggcgac 215 Query: 87 cgcctcactcgcgctgccaaggagttggagcagctgagcgg 127 |||||||| ||||| ||||||| | |||||||||| ||||| Sbjct: 216 cgcctcacccgcgccgccaaggtgctggagcagctcagcgg 256
>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence Length = 128493 Score = 105 bits (53), Expect = 4e-20 Identities = 71/77 (92%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 128291 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaacatctcc 128350 Query: 69 gtcagcgagagcggcga 85 ||| ||||||||||||| Sbjct: 128351 gtcggcgagagcggcga 128367
>gb|BT017676.1| Zea mays clone EL01N0442H11.c mRNA sequence Length = 858 Score = 105 bits (53), Expect = 4e-20 Identities = 89/101 (88%) Strand = Plus / Plus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| Sbjct: 82 atgcgggagatcaaggtgcagaagctcgtcctcaatatctccgtcggggagagcggcgac 141 Query: 87 cgcctcactcgcgctgccaaggagttggagcagctgagcgg 127 || ||||| ||||| || |||| | | |||||||| ||||| Sbjct: 142 cgtctcacccgcgccgcaaaggtgctcgagcagctcagcgg 182
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 105 bits (53), Expect = 4e-20 Identities = 71/77 (92%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2911 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaacatctcc 2970 Query: 69 gtcagcgagagcggcga 85 ||| ||||||||||||| Sbjct: 2971 gtcggcgagagcggcga 2987 Score = 42.1 bits (21), Expect = 0.45 Identities = 33/37 (89%) Strand = Plus / Plus Query: 110 gttggagcagctgagcgggcagtcgccagttttctcc 146 ||||||||||||||| |||||| |||||||||||| Sbjct: 3209 gttggagcagctgagtgggcagagcccagttttctcc 3245
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 105 bits (53), Expect = 4e-20 Identities = 71/77 (92%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6564857 aagaagcagtcgaacccgatgcgggagatcaaggtgcagaagctcgtgctcaacatctcc 6564916 Query: 69 gtcagcgagagcggcga 85 ||| ||||||||||||| Sbjct: 6564917 gtcggcgagagcggcga 6564933 Score = 42.1 bits (21), Expect = 0.45 Identities = 33/37 (89%) Strand = Plus / Plus Query: 110 gttggagcagctgagcgggcagtcgccagttttctcc 146 ||||||||||||||| |||||| |||||||||||| Sbjct: 6565155 gttggagcagctgagtgggcagagcccagttttctcc 6565191
>gb|BT017396.1| Zea mays clone EL01N0328C04.c mRNA sequence Length = 1249 Score = 101 bits (51), Expect = 6e-19 Identities = 87/99 (87%) Strand = Plus / Plus Query: 9 aagaaacagttgaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctcc 68 ||||| |||| |||| | ||||||||||| ||||| |||||||| || |||||||||||| Sbjct: 472 aagaagcagtcgaacccgatgcgggagatgaaggtccagaagcttgtgctcaacatctcc 531 Query: 69 gtcagcgagagcggcgatcgcctcactcgcgctgccaag 107 ||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 532 gtcggcgagagcggtgatcgcctcacccgcgccgccaag 570
>gb|AY104691.1| Zea mays PCO079292 mRNA sequence Length = 842 Score = 101 bits (51), Expect = 6e-19 Identities = 99/115 (86%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcc 90 |||||||||||||||||||||| || ||||||||||||||| | ||||| || ||||||| Sbjct: 106 gggagatcaaggtgcagaagctggtgctcaacatctccgtcggagagagtggggatcgcc 165 Query: 91 tcactcgcgctgccaaggagttggagcagctgagcgggcagtcgccagttttctc 145 |||| ||||| ||||||| ||||||| ||||| || ||||| ||||| ||||| Sbjct: 166 tcacccgcgccgccaaggtcctggagcaactgagtggccagtcaccagtgttctc 220
>gb|AY389650.1| Hyacinthus orientalis 60S ribosomal protein L11 (RPL11) mRNA, partial cds Length = 601 Score = 95.6 bits (48), Expect = 3e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| ||||||||||||| |||||||| |||||||||||||||||| | ||||| Sbjct: 47 gaaccccatgagggagatcaaggtccagaagctggtcctcaacatctccgtcggtgagag 106 Query: 80 cggcgatcgcct 91 |||||||||||| Sbjct: 107 cggcgatcgcct 118
>gb|BT016915.1| Zea mays clone Contig748 mRNA sequence Length = 812 Score = 91.7 bits (46), Expect = 5e-16 Identities = 89/102 (87%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 27 atgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgat 86 |||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 709 atgcgggagatcaaggtgcagaagctggtcctcaacatatccgtaggggagagcggcgac 650 Query: 87 cgcctcac-tcgcgctgccaaggagttggagcagctgagcgg 127 |||||||| |||| ||||||| | |||||||||| ||||| Sbjct: 649 cgcctcacggggcgccgccaaggtgctggagcagctcagcgg 608
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 8e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcc 90 |||||||||||||||||||||| || ||||||||||||||| | |||||||| ||||||| Sbjct: 20505708 gggagatcaaggtgcagaagctggtgctcaacatctccgtcggggagagcggagatcgcc 20505649 Query: 91 tcac 94 |||| Sbjct: 20505648 tcac 20505645
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 87.7 bits (44), Expect = 8e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcc 90 |||||||||||||||||||||| || ||||||||||||||| | |||||||| ||||||| Sbjct: 78003 gggagatcaaggtgcagaagctggtgctcaacatctccgtcggggagagcggagatcgcc 77944 Query: 91 tcac 94 |||| Sbjct: 77943 tcac 77940
>dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0319, complete sequence Length = 64598 Score = 79.8 bits (40), Expect = 2e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcc 90 ||||||||||||| ||||||||||||||||||||||||||| | ||||| || ||||| | Sbjct: 46195 gggagatcaaggtccagaagctcgtcctcaacatctccgtcggtgagagtggtgatcgtc 46254 Query: 91 tcac 94 |||| Sbjct: 46255 tcac 46258
>gb|AY495646.1| Cochliobolus heterostrophus polyketide synthase (PKS5) gene, complete cds Length = 11186 Score = 60.0 bits (30), Expect = 2e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 45 cagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcctcactcgcgctgcc 104 |||||||||||||||||||||||||| ||||| || ||||| |||||||| || ||| Sbjct: 10525 cagaagctcgtcctcaacatctccgttggcgagtctggtgatcgtctcactcgtgccgcc 10466 Query: 105 aaggagttggagcagctg 122 |||| | | ||||||||| Sbjct: 10465 aaggtgcttgagcagctg 10448
>gb|DQ235186.1| Solanum tuberosum clone 164B08 ribosomal protein L11-like protein mRNA, complete cds Length = 699 Score = 56.0 bits (28), Expect = 3e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcgg 82 |||| |||||||| |||||||| |||||||||||||| ||| | |||||||| Sbjct: 44 gggatatcaaggttcagaagctagtcctcaacatctctgtcggtgagagcgg 95
>ref|XM_367849.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07753.4) partial mRNA Length = 420 Score = 56.0 bits (28), Expect = 3e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctc 67 |||| ||||| ||||| ||||| | ||||||||||||||||||||||| Sbjct: 21 gaaccccatgagggagctcaagatccagaagctcgtcctcaacatctc 68
>gb|AY632360.1| Gossypium hirsutum BAC 106I22, complete sequence Length = 135862 Score = 54.0 bits (27), Expect = 1e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 54 gtcctcaacatctccgtcagcgagagcggcgatcgcctcactcgcgctgccaagg 108 |||||||||||||||||| | || ||||||||||| ||||| || || ||||||| Sbjct: 75757 gtcctcaacatctccgtcggtgaaagcggcgatcgtctcacccgtgccgccaagg 75703
>ref|NM_180806.1| Arabidopsis thaliana structural constituent of ribosome AT5G45775 transcript variant AT5G45775.1 mRNA, complete cds Length = 828 Score = 52.0 bits (26), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| |||| || ||||| ||||| || || |||||||| ||||| | ||||| Sbjct: 87 gaaccccatgagggacattaaggttcagaaacttgttctcaacatttccgttggtgagag 146 Query: 80 cggcgatcgcctcactcgcgctgccaaggagttggagcagct 121 || ||||| |||||||| || |||||| |||||||||||| Sbjct: 147 tggtgatcgtctcactcgtgcctccaaggtgttggagcagct 188
>ref|NM_123945.2| Arabidopsis thaliana structural constituent of ribosome AT5G45775 transcript variant AT5G45775.2 mRNA, complete cds Length = 827 Score = 52.0 bits (26), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| |||| || ||||| ||||| || || |||||||| ||||| | ||||| Sbjct: 86 gaaccccatgagggacattaaggttcagaaacttgttctcaacatttccgttggtgagag 145 Query: 80 cggcgatcgcctcactcgcgctgccaaggagttggagcagct 121 || ||||| |||||||| || |||||| |||||||||||| Sbjct: 146 tggtgatcgtctcactcgtgcctccaaggtgttggagcagct 187
>gb|AY078021.1| Arabidopsis thaliana AT4g18730/F28A21_140 mRNA, complete cds Length = 549 Score = 52.0 bits (26), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| |||| || ||||| ||||| || || |||||||| ||||| | ||||| Sbjct: 24 gaaccccatgagggacattaaggttcagaaacttgttctcaacatttccgttggtgagag 83 Query: 80 cggcgatcgcctcactcgcgctgccaaggagttggagcagct 121 || ||||| |||||||| || |||||| |||||||||||| Sbjct: 84 tggtgatcgtctcactcgtgcctccaaggtgttggagcagct 125
>gb|AF385722.1|AF385722 Arabidopsis thaliana AT4g18730/F28A21_140 mRNA, complete cds Length = 749 Score = 52.0 bits (26), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| |||| || ||||| ||||| || || |||||||| ||||| | ||||| Sbjct: 86 gaaccccatgagggacattaaggttcagaaacttgttctcaacatttccgttggtgagag 145 Query: 80 cggcgatcgcctcactcgcgctgccaaggagttggagcagct 121 || ||||| |||||||| || |||||| |||||||||||| Sbjct: 146 tggtgatcgtctcactcgtgcctccaaggtgttggagcagct 187
>gb|AY086211.1| Arabidopsis thaliana clone 22470 mRNA, complete sequence Length = 741 Score = 52.0 bits (26), Expect = 5e-04 Identities = 83/102 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| ||||| |||| || ||||| ||||| || || |||||||| ||||| | ||||| Sbjct: 87 gaaccccatgagggacattaaggttcagaaacttgttctcaacatttccgttggtgagag 146 Query: 80 cggcgatcgcctcactcgcgctgccaaggagttggagcagct 121 || ||||| |||||||| || |||||| |||||||||||| Sbjct: 147 tggtgatcgtctcactcgtgcctccaaggtgttggagcagct 188
>emb|AJ295006.1|NTA295006 Nicotiana tabacum partial mRNA for ribosomal protein L11-like protein (rbl11-like) Length = 813 Score = 48.1 bits (24), Expect = 0.007 Identities = 54/64 (84%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagagcggcgatcgcc 90 ||||||| || || ||||||||||| ||||||||||| ||| | || ||||| ||||| | Sbjct: 107 gggagattaaagtccagaagctcgttctcaacatctctgtcggtgaaagcggagatcgtc 166 Query: 91 tcac 94 |||| Sbjct: 167 tcac 170
>gb|AY632359.1| Gossypium hirsutum BAC 155C17, complete sequence Length = 103930 Score = 46.1 bits (23), Expect = 0.029 Identities = 47/55 (85%) Strand = Plus / Minus Query: 54 gtcctcaacatctccgtcagcgagagcggcgatcgcctcactcgcgctgccaagg 108 |||||||||||||||||| | || || |||||||| ||||| || || ||||||| Sbjct: 70005 gtcctcaacatctccgtcggtgaaagtggcgatcgtctcacccgtgccgccaagg 69951
>ref|XM_381257.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01081.1) partial mRNA Length = 522 Score = 46.1 bits (23), Expect = 0.029 Identities = 41/47 (87%) Strand = Plus / Plus Query: 25 ccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtc 71 ||||||||||| | ||| | ||||||||||| || |||||||||||| Sbjct: 26 ccatgcgggagctgaagattcagaagctcgttctgaacatctccgtc 72
>ref|XM_798156.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L11 (Tc00.1047053508197.10) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.029 Identities = 44/51 (86%) Strand = Plus / Plus Query: 81 ggcgatcgcctcactcgcgctgccaaggagttggagcagctgagcgggcag 131 |||||||| ||||||||||| | |||| ||||||||||||| ||| |||| Sbjct: 97 ggcgatcgtctcactcgcgcctcgaaggtgttggagcagctgtgcgagcag 147
>emb|AL115668.1|CNS01CL8 Botrytis cinerea strain T4 cDNA library Length = 696 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 87 cagaagctcgttctcaacatctccgtc 113
>emb|AL116052.1|CNS01CVW Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 92 cagaagctcgttctcaacatctccgtc 118
>emb|AL114300.1|CNS01BJ8 Botrytis cinerea strain T4 cDNA library Length = 780 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 64 cagaagctcgttctcaacatctccgtc 90
>emb|AL113536.1|CNS01AY0 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 99 cagaagctcgttctcaacatctccgtc 125
>emb|AL113375.1|CNS01ATJ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 81 cagaagctcgttctcaacatctccgtc 107
>emb|AL112173.1|CNS019W5 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 71 cagaagctcgttctcaacatctccgtc 97
>emb|AL112006.1|CNS019RI Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 31 cagaagctcgttctcaacatctccgtc 57
>emb|AL111555.1|CNS019EZ Botrytis cinerea strain T4 cDNA library Length = 780 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 92 cagaagctcgttctcaacatctccgtc 118
>emb|AL111377.1|CNS019A1 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 97 cagaagctcgttctcaacatctccgtc 123
>emb|AL111140.1|CNS0193H Botrytis cinerea strain T4 cDNA library Length = 780 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 90 cagaagctcgttctcaacatctccgtc 116
>emb|AL111098.1|CNS0192B Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 92 cagaagctcgttctcaacatctccgtc 118
>emb|AL110651.1|CNS018PW Botrytis cinerea strain T4 cDNA library Length = 660 Score = 46.1 bits (23), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| ||||||||||||||| Sbjct: 71 cagaagctcgttctcaacatctccgtc 97
>ref|XM_960547.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L11 (NCU02509.1) partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatct 66 |||||||||||||||||||||| Sbjct: 37 cagaagctcgtcctcaacatct 58
>ref|XM_331707.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L11 (NCU02509.1) partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatct 66 |||||||||||||||||||||| Sbjct: 37 cagaagctcgtcctcaacatct 58
>ref|XM_567416.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l11 (CNJ03370) partial mRNA Length = 607 Score = 44.1 bits (22), Expect = 0.11 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 agaagctcgtcctcaacatctccgtc 71 ||||||||||| |||||||||||||| Sbjct: 79 agaagctcgtcatcaacatctccgtc 104
>gb|AY130418.1| Petromyzon marinus ribosomal protein L11 mRNA, partial cds Length = 537 Score = 44.1 bits (22), Expect = 0.11 Identities = 55/66 (83%) Strand = Plus / Plus Query: 56 cctcaacatctccgtcagcgagagcggcgatcgcctcactcgcgctgccaaggagttgga 115 ||||||||||| ||| |||||||||| ||||| || || ||||| ||||||| | | || Sbjct: 66 cctcaacatctgcgtgggcgagagcggagatcggctgacccgcgccgccaaggtgctcga 125 Query: 116 gcagct 121 |||||| Sbjct: 126 gcagct 131
>ref|XM_236346.3| PREDICTED: Rattus norvegicus putative neuronal cell adhesion molecule (predicted) (Punc_predicted), mRNA Length = 2757 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 tgccaaggagttggagcagctg 122 |||||||||||||||||||||| Sbjct: 2484 tgccaaggagttggagcagctg 2505
>ref|NM_115732.2| Arabidopsis thaliana structural constituent of ribosome AT3G58700 mRNA, complete cds Length = 784 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 144 gtgcagaagctggttctcaacatctccgt 172
>ref|NM_180045.2| Arabidopsis thaliana RPL16A; structural constituent of ribosome AT2G42740 (RPL16A) mRNA, complete cds Length = 716 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 77 gtgcagaagctggttctcaacatctccgt 105
>ref|XM_774529.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_81_173473_174138) partial mRNA Length = 666 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 agaagctcgtcctcaacatct 66 ||||||||||||||||||||| Sbjct: 575 agaagctcgtcctcaacatct 555
>ref|XM_774530.1| Giardia lamblia ATCC 50803 60s ribosomal protein L11 (GLP_81_174090_173569) partial mRNA Length = 522 Score = 42.1 bits (21), Expect = 0.45 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 agaagctcgtcctcaacatct 66 ||||||||||||||||||||| Sbjct: 44 agaagctcgtcctcaacatct 64
>emb|X81799.1|ATRPL16A A.thaliana RPL16A gene Length = 2193 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 1060 gtgcagaagctggttctcaacatctccgt 1088
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 11650 gtgcagaagctggttctcaacatctccgt 11678
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Minus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 89829 gtgcagaagctggttctcaacatctccgt 89801
>gb|AY074636.1| Arabidopsis thaliana At2g42740/F7D19.26 mRNA, complete cds Length = 576 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 38 gtgcagaagctggttctcaacatctccgt 66
>emb|BX825712.1|CNS0A52M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 701 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 99 gtgcagaagctggttctcaacatctccgt 127
>gb|AY085232.1| Arabidopsis thaliana clone 14042 mRNA, complete sequence Length = 723 Score = 42.1 bits (21), Expect = 0.45 Identities = 27/29 (93%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacatctccgt 70 ||||||||||| || |||||||||||||| Sbjct: 144 gtgcagaagctggttctcaacatctccgt 172
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgtcagcgagagcggcgatc 87 |||||||||||||||||||| Sbjct: 16149 cgtcagcgagagcggcgatc 16130
>emb|AL035700.13|HS75K24 Human DNA sequence from clone RP1-75K24 on chromosome 6q13-15, complete sequence Length = 80279 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tgaaaagaaacagttgaaca 24 |||||||||||||||||||| Sbjct: 59744 tgaaaagaaacagttgaaca 59763
>gb|AC079742.6| Homo sapiens BAC clone CTD-2275G13 from 7, complete sequence Length = 41229 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 15197 gagcgggcagtcgccagttt 15178
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacat 64 |||||||||||||||||||| Sbjct: 4845155 cagaagctcgtcctcaacat 4845174
>gb|AC022898.11| Homo sapiens chromosome 15, clone RP11-554D20, complete sequence Length = 200380 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gaaaagaaacagttgaacac 25 |||||||||||||||||||| Sbjct: 57202 gaaaagaaacagttgaacac 57183
>emb|AJ338747.1|HSA338747 Homo sapiens genomic sequence surrounding NotI site, clone NB1-O36C Length = 961 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 456 gagcgggcagtcgccagttt 437
>emb|AJ339523.1|HSA339523 Homo sapiens genomic sequence surrounding NotI site, clone NR5-O29R Length = 832 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 455 gagcgggcagtcgccagttt 436
>emb|AJ326218.1|HSA326218 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ED18C Length = 606 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 462 gagcgggcagtcgccagttt 443
>emb|AJ326217.1|HSA326217 Homo sapiens genomic sequence surrounding NotI site, clone NL1-EL14C Length = 605 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 460 gagcgggcagtcgccagttt 441
>emb|AJ325223.1|HSA325223 Homo sapiens genomic sequence surrounding NotI site, clone NL1-EH24C Length = 589 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gagcgggcagtcgccagttt 141 |||||||||||||||||||| Sbjct: 456 gagcgggcagtcgccagttt 437
>gb|U16018.1|LCU16018 Leishmania chagasi ribosomal protein L-11 mRNA, complete cds Length = 679 Score = 40.1 bits (20), Expect = 1.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 20 gaacaccatgcgggagatcaaggtgcagaagctcgtcctcaacatctccgtcagcgagag 79 |||| |||||||||||||| ||| |||||||| | ||||||||| ||| | ||||| Sbjct: 43 gaaccccatgcgggagatcgtcgtgaagaagctctgcatcaacatctgcgttggtgagag 102 Query: 80 cggcgatcgcct 91 ||| |||||||| Sbjct: 103 cggtgatcgcct 114
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3, complete sequence Length = 122591 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgt 70 |||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 92623 gggatatcaaagtgcaaaagcttgtactcaacatctccgt 92662 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 31 gggagatcaaggtgcagaagctcgtcctcaacatctccgt 70 |||| ||||| ||||| || || ||||||||||||||||| Sbjct: 89248 gggaaatcaaagtgcaaaaacttgtcctcaacatctccgt 89287
>gb|AC115011.27| Mus musculus chromosome 1, clone RP24-192A11, complete sequence Length = 173802 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 152833 ctcactcgcgctgccaagg 152815
>ref|XM_522203.1| PREDICTED: Pan troglodytes similar to intestinal and kidney enriched PDZ protein (LOC466803), mRNA Length = 1518 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 559 ggagcagctgagcgggcag 577
>ref|NM_001034664.1| Bos taurus similar to natrium-phosphate cotransporter IIa C-terminal-associated protein 2 (MGC129076), mRNA Length = 3237 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 570 ggagcagctgagcgggcag 588
>ref|NM_213264.1| Danio rerio zgc:85892 (zgc:85892), mRNA Length = 2919 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 cgggagatcaaggtgcaga 48 ||||||||||||||||||| Sbjct: 1336 cgggagatcaaggtgcaga 1354
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 135704 ctcactcgcgctgccaagg 135722
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 42 gtgcagaagctcgtcctcaacat 64 ||||||||||| ||||||||||| Sbjct: 1240986 gtgcagaagctggtcctcaacat 1241008 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 agaagctcgtcctcaacat 64 ||||||||||||||||||| Sbjct: 651144 agaagctcgtcctcaacat 651162
>ref|NM_007463.2| Mus musculus SPEG complex locus (Speg), mRNA Length = 10801 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 9975 ctcactcgcgctgccaagg 9993
>gb|AY657376.1| Synthetic construct Peudomonas aeruginosa clone FLH043088.01F PA2016 gene, partial cds Length = 405 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 10 agaaacagttgaacaccatgcgggaga 36 |||| |||||||||||||||| ||||| Sbjct: 242 agaagcagttgaacaccatgctggaga 268
>gb|AC104542.10| Mus musculus chromosome 1, clone RP23-165D11, complete sequence Length = 211537 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 ctgccaaggagttggagca 118 ||||||||||||||||||| Sbjct: 171778 ctgccaaggagttggagca 171796
>gb|AY395690.1| Solanum brevidens ribosomal protein L11-like protein mRNA, partial cds Length = 626 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Plus Query: 48 aagctcgtcctcaacatctccgtcagcgagagcgg 82 ||||| |||||||||||||| ||| | |||||||| Sbjct: 1 aagctagtcctcaacatctctgtcggtgagagcgg 35
>gb|BC029042.1| Homo sapiens PDZ domain containing 3, mRNA (cDNA clone MGC:34160 IMAGE:5186364), complete cds Length = 2246 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 568 ggagcagctgagcgggcag 586
>gb|AC175118.5| Mus musculus chromosome 1, clone wi1-2169I10, complete sequence Length = 39790 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 ctgccaaggagttggagca 118 ||||||||||||||||||| Sbjct: 17939 ctgccaaggagttggagca 17957
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 tgcagaagctcgtcctcaa 61 ||||||||||||||||||| Sbjct: 105895 tgcagaagctcgtcctcaa 105877
>gb|BC068419.1| Danio rerio zgc:85892, mRNA (cDNA clone MGC:85892 IMAGE:6970400), complete cds Length = 2919 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 cgggagatcaaggtgcaga 48 ||||||||||||||||||| Sbjct: 1336 cgggagatcaaggtgcaga 1354
>gb|AY047359.1| Homo sapiens intestinal and kidney enriched PDZ protein mRNA, complete cds Length = 1518 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 559 ggagcagctgagcgggcag 577
>dbj|AK091966.1| Homo sapiens cDNA FLJ34647 fis, clone KIDNE2017343, weakly similar to Homo sapiens PDZ domain containing-protein (PDZK1) mRNA Length = 2652 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 892 ggagcagctgagcgggcag 910
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gcgagagcggcgatcgcct 91 ||||||||||||||||||| Sbjct: 604670 gcgagagcggcgatcgcct 604652
>gb|BC105272.1| Bos taurus similar to natrium-phosphate cotransporter IIa C-terminal-associated protein 2, mRNA (cDNA clone MGC:129076 IMAGE:8121690), complete cds Length = 3237 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 570 ggagcagctgagcgggcag 588
>dbj|AK147475.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1050A01 product:aortic preferentially expressed gene 1, full insert sequence Length = 9891 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 9081 ctcactcgcgctgccaagg 9099
>ref|XM_694551.1| PREDICTED: Danio rerio similar to GLIS family zinc finger 3 (LOC571000), mRNA Length = 2130 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 1083 catctccgtcagcgagagc 1101
>gb|S61403.1| troponin I [rabbits, fast skeletal muscle, mRNA, 569 nt] Length = 569 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 ggagatcaaggtgcagaag 50 ||||||||||||||||||| Sbjct: 252 ggagatcaaggtgcagaag 270
>dbj|AK035543.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530064D15 product:aortic preferentially expressed gene 1, full insert sequence Length = 3241 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 2444 ctcactcgcgctgccaagg 2462
>ref|NM_024791.2| Homo sapiens PDZ domain containing 3 (PDZD3), mRNA Length = 2246 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 568 ggagcagctgagcgggcag 586
>emb|AL115005.1|CNS01C2T Botrytis cinerea strain T4 cDNA library Length = 696 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 45 cagaagctcgtcctcaacatctccgtc 71 ||||||||||| |||||||||| |||| Sbjct: 63 cagaagctcgttctcaacatcttcgtc 89
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 ccgtcagcgagagcggcga 85 ||||||||||||||||||| Sbjct: 20754641 ccgtcagcgagagcggcga 20754659
>gb|AF215896.1|AF215896 Mus musculus striated muscle-specific serine/threonine protein kinase (Speg) mRNA, complete cds Length = 10801 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 9975 ctcactcgcgctgccaagg 9993
>gb|AE004628.1| Pseudomonas aeruginosa PAO1, section 189 of 529 of the complete genome Length = 10962 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 10 agaaacagttgaacaccatgcgggaga 36 |||| |||||||||||||||| ||||| Sbjct: 1467 agaagcagttgaacaccatgctggaga 1441
>dbj|AK203663.1| Mus musculus cDNA, clone:Y1G0145L15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038230, based on BLAT search Length = 197 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 25 ctcactcgcgctgccaagg 43
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 9374 catctccgtcagcgagagc 9392
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete sequences Length = 174520 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 101089 catctccgtcagcgagagc 101107
>dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, map 22, complete sequences Length = 100580 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 51775 catctccgtcagcgagagc 51793
>emb|BX648391.1|HSM808539 Homo sapiens mRNA; cDNA DKFZp686H12213 (from clone DKFZp686H12213) Length = 2525 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 656 ggagcagctgagcgggcag 674
>dbj|AK026409.1| Homo sapiens cDNA: FLJ22756 fis, clone KAIA0791 Length = 2547 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 579 ggagcagctgagcgggcag 597
>ref|XM_309461.1| Anopheles gambiae str. PEST ENSANGP00000008319 (ENSANGG00000006280), partial mRNA Length = 3519 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 gttggagcagctgagcggg 128 ||||||||||||||||||| Sbjct: 2436 gttggagcagctgagcggg 2454
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 72587 catctccgtcagcgagagc 72605
>dbj|AB094096.1| Homo sapiens DLNB27 mRNA, complete cds Length = 2979 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 1289 ggagcagctgagcgggcag 1307
>dbj|AK122488.1| Mus musculus mRNA for mKIAA1297 protein Length = 4357 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcactcgcgctgccaagg 108 ||||||||||||||||||| Sbjct: 3561 ctcactcgcgctgccaagg 3579
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 ccgtcagcgagagcggcga 85 ||||||||||||||||||| Sbjct: 20680855 ccgtcagcgagagcggcga 20680873
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 ccgtcagcgagagcggcga 85 ||||||||||||||||||| Sbjct: 52482 ccgtcagcgagagcggcga 52500
>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete sequence Length = 219574 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 ggagcagctgagcgggcag 131 ||||||||||||||||||| Sbjct: 56872 ggagcagctgagcgggcag 56890
>emb|X14190.1|OCTROI O.cuniculus mRNA for troponin I Length = 701 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 ggagatcaaggtgcagaag 50 ||||||||||||||||||| Sbjct: 320 ggagatcaaggtgcagaag 338
>gb|L04347.1|RABTROPON Rabbit troponin I mRNA, complete cds Length = 707 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 ggagatcaaggtgcagaag 50 ||||||||||||||||||| Sbjct: 322 ggagatcaaggtgcagaag 340
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171 region, complete sequence Length = 158063 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 catctccgtcagcgagagc 80 ||||||||||||||||||| Sbjct: 72587 catctccgtcagcgagagc 72605 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,238,729 Number of Sequences: 3902068 Number of extensions: 1238729 Number of successful extensions: 80584 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80076 Number of HSP's gapped (non-prelim): 508 length of query: 146 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 125 effective length of database: 17,151,101,840 effective search space: 2143887730000 effective search space used: 2143887730000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
