ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags20e22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2739 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 1603 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 1662 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 1663 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 1722 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 1723 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 1782 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 1783 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 1842 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 1843 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 1902 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 1903 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 1962 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 1963 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 2022 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 2023 ggagaatggttttcctcttgtcc 2045
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Minus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 31368955 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 31368896 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 31368895 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 31368836 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 31368835 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 31368776 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 31368775 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 31368716 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 31368715 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 31368656 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 31368655 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 31368596 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 31368595 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 31368536 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 31368535 ggagaatggttttcctcttgtcc 31368513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 30455000 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 30455059 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 30455060 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 30455119 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 30455120 tgctggggtattggactaggatttgg 30455145
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Minus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 123238 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 123179 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 123178 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 123119 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 123118 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 123059 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 123058 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 122999 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 122998 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 122939 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 122938 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 122879 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 122878 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 122819 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 122818 ggagaatggttttcctcttgtcc 122796
>dbj|AK103775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143P14, full insert sequence Length = 3039 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 1836 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 1895 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 1896 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 1955 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 1956 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 2015 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2016 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 2075 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 2076 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 2135 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 2136 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 2195 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2196 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 2255 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 2256 ggagaatggttttcctcttgtcc 2278
>dbj|AK102455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A19, full insert sequence Length = 3876 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 1849 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 1908 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 1909 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 1968 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 1969 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 2028 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2029 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 2088 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 2089 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 2148 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 2149 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 2208 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2209 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 2268 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 2269 ggagaatggttttcctcttgtcc 2291
>dbj|AK067731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P06, full insert sequence Length = 3432 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 1849 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 1908 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 1909 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 1968 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 1969 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 2028 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2029 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 2088 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 2089 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 2148 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 2149 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 2208 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2209 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 2268 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 2269 ggagaatggttttcctcttgtcc 2291
>dbj|AK064990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D09, full insert sequence Length = 3272 Score = 444 bits (224), Expect = e-121 Identities = 388/443 (87%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||| |||||||||| || |||||||| || ||||||| || || ||||| ||| Sbjct: 1849 gcagaggcactgaatgaggccatatcaatgtcggaacaggagaaacacctaaggcatgag 1908 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 1909 aaacattaccgttatgtcagcacccacgatgttgcttattggtcgaaaagtttcatccaa 1968 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 || ||||||||||||||||||||||| || || |||||||| |||||||| || ||||| Sbjct: 1969 gatttggagagggcttgcaaggaccacttcaggaggacatgttggggcatcgggttgggg 2028 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 2029 tttggttttagggtggtggccttagatccccatttcacaaagcttaacatggattcaatt 2088 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 ||||||||||| ||| |||| ||||| || |||||||| || || |||||||||||| || Sbjct: 2089 gttatggcttatgagcggtcagagagtagggctatatttcttgattatgatggaacactg 2148 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 ||||| ||||||||||||| | |||||| ||||| |||||| ||||||| |||||| || Sbjct: 2149 gtgccacagacttccatcagtaggacacctagtgcggaagttttgaggatcatcaatacc 2208 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2209 ctgtgctcagataggaggaacaaagtttttcttgtcagtgggagacgcagggacaaattg 2268 Query: 424 ggtgaatggttttcctcatgtcc 446 || |||||||||||||| ||||| Sbjct: 2269 ggagaatggttttcctcttgtcc 2291
>gb|AY108498.1| Zea mays PCO093951 mRNA sequence Length = 1981 Score = 341 bits (172), Expect = 1e-90 Identities = 399/475 (84%) Strand = Plus / Plus Query: 4 gcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgag 63 |||||||||||||||||||| ||||||||| | || |||| || ||| ||||||| ||| Sbjct: 216 gcagaggcgatgaatgaggccatttcaatgccagaacaggaaaaacagttgaggcatgag 275 Query: 64 aagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatccag 123 || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 276 aaacattaccgttatgtcaggagccatgatgttgcttattggtcaaagagcttcatccta 335 Query: 124 gacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattggga 183 |||||||| |||||||| | |||||| |||| |||||||| |||||||| || ||||| Sbjct: 336 gacttggaaagggcttgtagggaccactttaagaggacatgttggggcatagggttgggt 395 Query: 184 tttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattctatt 243 ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||| Sbjct: 396 tttggtttcagggtggtggccttggacgctcatttcagaaagcttaacatggattcaatt 455 Query: 244 gttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacattg 303 |||| ||||| |||| || | |||||| ||||||||||| || |||||||||||| || Sbjct: 456 gttaatgcttatgagatttcagggagcagggctatattgcttgattatgatggaacactg 515 Query: 304 gtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatgcc 363 || || || ||||| ||||||||| ||| ||| |||| ||| ||| || |||||| || Sbjct: 516 gttcctcaaacttcaatcaacaaggaacctagtccagaggttttgaacatcatcaatacc 575 Query: 364 ctctgctcagataagaggaacatagtttttcttgtcagtgggagaggccgggataaattg 423 || |||||||||| || ||||| ||||||||||||||||| |||| | |||| || Sbjct: 576 ctttgctcagatagtagaaacatcgtttttcttgtcagtggtagagacaaagatatgtta 635 Query: 424 ggtgaatggttttcctcatgtccgaagctgggtattgcatctgaacatggctact 478 || | ||||| ||||||||||| || |||| |||||| |||||||||| |||| Sbjct: 636 ggaaagtggttctcctcatgtccaaaattggggattgcagctgaacatggttact 690
>ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 278 bits (140), Expect = 2e-71 Identities = 316/375 (84%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||||||||| |||||||||| || |||||||| || || |||||||||||||||| Sbjct: 1565 ctgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacg 1624 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | || |||||||||||||||||||||||||||||||| |||||||| |||||||| | | Sbjct: 1625 aaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtac 1684 Query: 122 aggacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattgg 181 ||||| ||||||||||||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 1685 aggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgg 1744 Query: 182 gatttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattcta 241 ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| | ||||| | Sbjct: 1745 gatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaa 1804 Query: 242 ttgttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacat 301 || | ||| | || ||||| || |||| || |||||||| |||||||||||||| |||| Sbjct: 1805 ttataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacat 1864 Query: 302 tggtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatg 361 ||||||| ||| |||| ||||||||| || |||| |||| | |||||||| || ||| Sbjct: 1865 tggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaata 1924 Query: 362 ccctctgctcagata 376 |||| ||| |||||| Sbjct: 1925 ccctatgcgcagata 1939
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 278 bits (140), Expect = 2e-71 Identities = 316/375 (84%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||||||||| |||||||||| || |||||||| || || |||||||||||||||| Sbjct: 83382 ctgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacg 83441 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | || |||||||||||||||||||||||||||||||| |||||||| |||||||| | | Sbjct: 83442 aaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtac 83501 Query: 122 aggacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattgg 181 ||||| ||||||||||||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 83502 aggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgg 83561 Query: 182 gatttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattcta 241 ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| | ||||| | Sbjct: 83562 gatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaa 83621 Query: 242 ttgttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacat 301 || | ||| | || ||||| || |||| || |||||||| |||||||||||||| |||| Sbjct: 83622 ttataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacat 83681 Query: 302 tggtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatg 361 ||||||| ||| |||| ||||||||| || |||| |||| | |||||||| || ||| Sbjct: 83682 tggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaata 83741 Query: 362 ccctctgctcagata 376 |||| ||| |||||| Sbjct: 83742 ccctatgcgcagata 83756
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 278 bits (140), Expect = 2e-71 Identities = 316/375 (84%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||||||||| |||||||||| || |||||||| || || |||||||||||||||| Sbjct: 25443021 ctgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacg 25443080 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | || |||||||||||||||||||||||||||||||| |||||||| |||||||| | | Sbjct: 25443081 aaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtac 25443140 Query: 122 aggacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattgg 181 ||||| ||||||||||||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 25443141 aggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgg 25443200 Query: 182 gatttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattcta 241 ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| | ||||| | Sbjct: 25443201 gatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaa 25443260 Query: 242 ttgttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacat 301 || | ||| | || ||||| || |||| || |||||||| |||||||||||||| |||| Sbjct: 25443261 ttataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacat 25443320 Query: 302 tggtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatg 361 ||||||| ||| |||| ||||||||| || |||| |||| | |||||||| || ||| Sbjct: 25443321 tggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaata 25443380 Query: 362 ccctctgctcagata 376 |||| ||| |||||| Sbjct: 25443381 ccctatgcgcagata 25443395
>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full insert sequence Length = 3498 Score = 278 bits (140), Expect = 2e-71 Identities = 316/375 (84%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||||||||| |||||||||| || |||||||| || || |||||||||||||||| Sbjct: 1740 ctgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacg 1799 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | || |||||||||||||||||||||||||||||||| |||||||| |||||||| | | Sbjct: 1800 aaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtac 1859 Query: 122 aggacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattgg 181 ||||| ||||||||||||||||||| || ||||| | ||||||||||||||||||||| Sbjct: 1860 aggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgg 1919 Query: 182 gatttggtttcagggtggtggccttagaccctcatttcacaaagcttaacatggattcta 241 ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| | ||||| | Sbjct: 1920 gatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaa 1979 Query: 242 ttgttatggcttacgagaggtcggagagcagagctatattgctcgactatgatggaacat 301 || | ||| | || ||||| || |||| || |||||||| |||||||||||||| |||| Sbjct: 1980 ttataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacat 2039 Query: 302 tggtgccgcagacttccatcaacaagacacccagtgcagaagttctgaggattatcaatg 361 ||||||| ||| |||| ||||||||| || |||| |||| | |||||||| || ||| Sbjct: 2040 tggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaata 2099 Query: 362 ccctctgctcagata 376 |||| ||| |||||| Sbjct: 2100 ccctatgcgcagata 2114
>gb|AY166671.2| Cypripedium parviflorum var. pubescens trehalose-6-phosphate synthase/phosphatase (Tps) mRNA, partial cds Length = 2219 Score = 119 bits (60), Expect = 9e-24 Identities = 164/199 (82%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||||||||| ||||| ||||| || || ||| |||| ||||||||||||| |||| | Sbjct: 1040 ctgcagaggccatgaacgaggcaatctctatgagtgatgcggagaagcagctgcggcatg 1099 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | |||||||| | ||||| || || |||||||| ||||||||||| ||| |||||| | Sbjct: 1100 aaaagcattatagatatgtgagtactcatgatgtggcttattggtccaagtccttcatgc 1159 Query: 122 aggacttggagagggcttgcaaggaccattttagaaggacatgctggggcattggattgg 181 | |||||||||||| | ||||||||||| |||| |||| |||||||| ||||| |||| Sbjct: 1160 atgacttggagaggacatgcaaggaccactttaagaggaggtgctgggggattggtttgg 1219 Query: 182 gatttggtttcagggtggt 200 ||||||| || |||||||| Sbjct: 1220 gatttgggtttagggtggt 1238
>gb|AF483209.1| Solanum tuberosum putative trehalose synthase (StTS1) gene, exons 1 through 4 and complete cds Length = 8590 Score = 101 bits (51), Expect = 2e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||| ||||| |||||||||||| | |||||| |||| | ||||| ||||| | || | Sbjct: 3484 ctgctgaggcaatgaatgaggctgtgtcaatggctgaacaagagaaacagctacgacatg 3543 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtc 107 |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3544 agaagcattaccgttatgtcagcacccacgatgttgcttattggtc 3589
>ref|NM_191881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2637 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 1594 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 1653 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 1654 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 1713 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 1714 tgctggggtattggactaggatttgg 1739
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 83263 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 83322 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 83323 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 83382 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 83383 tgctggggtattggactaggatttgg 83408
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 140727 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 140786 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 140787 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 140846 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 140847 tgctggggtattggactaggatttgg 140872
>dbj|AK105417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A05, full insert sequence Length = 2455 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 995 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 1054 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 1055 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 1114 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 1115 tgctggggtattggactaggatttgg 1140
>dbj|AK101207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031A01, full insert sequence Length = 3122 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 43 gagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttgcttat 102 |||||||| ||| |||| |||||||||||| | ||||||||| | ||||||||||| ||| Sbjct: 1737 gagaagcaactgcggcatgagaagcattacagatatgtcagctcacatgatgttgcctat 1796 Query: 103 tggtcaaagagcttcatccaggacttggagagggcttgcaaggaccattttagaaggaca 162 ||||| ||||||| || || || |||||||| |||| |||||||||||| |||| Sbjct: 1797 tggtccaagagctatattcatgatttggagagaagctgcagggaccattttaggaggagg 1856 Query: 163 tgctggggcattggattgggatttgg 188 |||||||| |||||| | |||||||| Sbjct: 1857 tgctggggtattggactaggatttgg 1882
>gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete sequence Length = 111249 Score = 73.8 bits (37), Expect = 5e-10 Identities = 126/156 (80%) Strand = Plus / Minus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||| ||||| |||||||| || ||||||||| |||| ||||||||| || |||| | Sbjct: 31542 ctgcggaggcaatgaatgaagccatttcaatgagtgatggagagaagcagttgcggcatg 31483 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | |||||||| || ||||||||||| ||||| || ||||| |||||| || ||| | | Sbjct: 31482 aaaagcattatcggtatgtcagcactcatgacgtggcttactggtcacgtagtttcttgc 31423 Query: 122 aggacttggagagggcttgcaaggaccattttagaa 157 | ||| ||||||||||||||| ||||| | |||||| Sbjct: 31422 aagacatggagagggcttgcacggaccttcttagaa 31387
>gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete sequence Length = 120202 Score = 73.8 bits (37), Expect = 5e-10 Identities = 126/156 (80%) Strand = Plus / Plus Query: 2 ctgcagaggcgatgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacg 61 |||| ||||| |||||||| || ||||||||| |||| ||||||||| || |||| | Sbjct: 92499 ctgcggaggcaatgaatgaagccatttcaatgagtgatggagagaagcagttgcggcatg 92558 Query: 62 agaagcattaccgttatgtcagcacccatgatgttgcttattggtcaaagagcttcatcc 121 | |||||||| || ||||||||||| ||||| || ||||| |||||| || ||| | | Sbjct: 92559 aaaagcattatcggtatgtcagcactcatgacgtggcttactggtcacgtagtttcttgc 92618 Query: 122 aggacttggagagggcttgcaaggaccattttagaa 157 | ||| ||||||||||||||| ||||| | |||||| Sbjct: 92619 aagacatggagagggcttgcacggaccttcttagaa 92654
>ref|NM_117886.2| Arabidopsis thaliana ATTPS5; transferase, transferring glycosyl groups / trehalose-phosphatase AT4G17770 (ATTPS5) mRNA, complete cds Length = 3052 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1854 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 1901
>ref|NM_202376.1| Arabidopsis thaliana ATTPS6; trehalose-phosphatase AT1G68020 (ATTPS6) transcript variant AT1G68020.2 mRNA, complete cds Length = 2908 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 42 ggagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttg 97 |||||||||||| || || |||||||||||| ||||| ||||| |||||||||| Sbjct: 1781 ggagaagcagctaagacatgagaagcattacaagtatgtgagcacacatgatgttg 1836
>ref|NM_105472.2| Arabidopsis thaliana ATTPS6; transferase, transferring glycosyl groups / trehalose-phosphatase AT1G68020 (ATTPS6) transcript variant AT1G68020.1 mRNA, complete cds Length = 2992 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 42 ggagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttg 97 |||||||||||| || || |||||||||||| ||||| ||||| |||||||||| Sbjct: 1781 ggagaagcagctaagacatgagaagcattacaagtatgtgagcacacatgatgttg 1836
>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9 Length = 81835 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 43952 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 43999
>gb|AY046028.1| Arabidopsis thaliana putative trehalose-6-phosphate synthase (At1g68020) mRNA, complete cds Length = 3001 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 42 ggagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttg 97 |||||||||||| || || |||||||||||| ||||| ||||| |||||||||| Sbjct: 1781 ggagaagcagctaagacatgagaagcattacaagtatgtgagcacacatgatgttg 1836
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47 Length = 198067 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 38964 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 39011
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 42 ggagaagcagctgaggcacgagaagcattaccgttatgtcagcacccatgatgttg 97 |||||||||||| || || |||||||||||| ||||| ||||| |||||||||| Sbjct: 45320 ggagaagcagctaagacatgagaagcattacaagtatgtgagcacacatgatgttg 45265
>emb|BX827855.1|CNS0A49N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2749 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1665 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 1712
>gb|BT005967.1| Arabidopsis thaliana At4g17770 gene, complete cds Length = 2589 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1561 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 1608
>gb|AY089209.1| Arabidopsis thaliana clone 95947 mRNA, complete sequence Length = 2957 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1855 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 1902
>dbj|AK118703.1| Arabidopsis thaliana At4g17770 mRNA for putative trehalose-6-phosphate synthase, complete cds, clone: RAFL19-96-N16 Length = 2774 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 |||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1662 cacgagaagcatcacaaatatgttagcacacatgatgttgcttattgg 1709
>gb|AY884150.1| Ginkgo biloba trehalose-6-phosphate synthase mRNA, complete cds Length = 2743 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Plus Query: 277 atattgctcgactatgatggaacattggtgccgcagacttccatcaacaa 326 |||||| | ||||||||||| ||| || |||| |||||||| |||||||| Sbjct: 1780 atattgttggactatgatggtacaatgatgcctcagacttctatcaacaa 1829
>gb|BT009244.1| Triticum aestivum clone wlk1.pk0017.e10:fis, full insert mRNA sequence Length = 2511 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 58 cacgagaagcattaccgttatgtcagcacccatgatgt 95 ||||||||||||||| ||||| |||||||||||||| Sbjct: 1105 cacgagaagcattacaagtatgtgagcacccatgatgt 1142
>gb|AY884151.1| Ginkgo biloba trehalose-6-phosphate synthase gene, complete cds Length = 4047 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Plus Query: 277 atattgctcgactatgatggaacattggtgccgcagacttccatcaacaa 326 |||||| | ||||||||||| ||| || |||| |||||||| |||||||| Sbjct: 2907 atattgttggactatgatggtacaatgatgcctcagacttctatcaacaa 2956
>ref|XM_482399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3188 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 440 catgtccgaagctgggtattgcatctgaacatggcta 476 |||||| |||||| ||||||||| | ||||||||||| Sbjct: 2230 catgtcagaagcttggtattgcagcagaacatggcta 2266
>gb|AC125119.2| Mus musculus BAC clone RP24-266E24 from chromosome 6, complete sequence Length = 194445 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gaggaacatagtttttcttgt 398 ||||||||||||||||||||| Sbjct: 30745 gaggaacatagtttttcttgt 30725
>gb|AC127293.3| Mus musculus BAC clone RP23-385B3 from chromosome 18, complete sequence Length = 209455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gagaggccgggataaattggg 425 ||||||||||||||||||||| Sbjct: 157500 gagaggccgggataaattggg 157480
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 448 aagctgggtattgcatctgaacatggcta 476 ||||| ||||||||| ||||||||||||| Sbjct: 12591853 aagcttggtattgcagctgaacatggcta 12591825
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 440 catgtccgaagctgggtattgcatctgaacatggcta 476 |||||| |||||| ||||||||| | ||||||||||| Sbjct: 19824356 catgtcagaagcttggtattgcagcagaacatggcta 19824320
>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gaggaacatagtttttcttgt 398 ||||||||||||||||||||| Sbjct: 103202 gaggaacatagtttttcttgt 103182
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 448 aagctgggtattgcatctgaacatggcta 476 ||||| ||||||||| ||||||||||||| Sbjct: 57791 aagcttggtattgcagctgaacatggcta 57763
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 448 aagctgggtattgcatctgaacatggcta 476 ||||| ||||||||| ||||||||||||| Sbjct: 107180 aagcttggtattgcagctgaacatggcta 107152
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 440 catgtccgaagctgggtattgcatctgaacatggcta 476 |||||| |||||| ||||||||| | ||||||||||| Sbjct: 153307 catgtcagaagcttggtattgcagcagaacatggcta 153271
>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full insert sequence Length = 3800 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 440 catgtccgaagctgggtattgcatctgaacatggcta 476 |||||| |||||| ||||||||| | ||||||||||| Sbjct: 2182 catgtcagaagcttggtattgcagcagaacatggcta 2218
>dbj|AK099398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O13, full insert sequence Length = 3187 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 440 catgtccgaagctgggtattgcatctgaacatggcta 476 |||||| |||||| ||||||||| | ||||||||||| Sbjct: 2229 catgtcagaagcttggtattgcagcagaacatggcta 2265
>gb|AY628140.1| Gossypium hirsutum cultivar Acala SJ2 trehalose 6-phosphate synthase gene, complete cds Length = 4973 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 61 gagaagcattaccgttatgtcagcacccatgatgttgcttattgg 105 ||||| || ||||| ||||||||||| |||||||| || |||||| Sbjct: 3235 gagaaacactaccggtatgtcagcactcatgatgtggcatattgg 3279
>gb|AC150274.2| Mus musculus BAC clone RP23-348G11 from 18, complete sequence Length = 194318 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 gagaggccgggataaattggg 425 ||||||||||||||||||||| Sbjct: 155755 gagaggccgggataaattggg 155775
>gb|AY619685.1| Uncultured gamma proteobacterium eBACHOT4E07 clone eBACHOT4E07, complete sequence Length = 71264 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tattggtcaaagagcttcat 119 |||||||||||||||||||| Sbjct: 51301 tattggtcaaagagcttcat 51320
>gb|AF223655.1| Trichechus manatus latirostris clone TmaM61 microsatellite sequence Length = 364 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 51 catgatgttgcttattggtc 70
>gb|AC124323.10| Mus musculus chromosome 19, clone RP24-444B6, complete sequence Length = 150803 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 ctcatttcacaaagcttaacatgg 235 |||||| ||||||||||||||||| Sbjct: 110137 ctcattccacaaagcttaacatgg 110160
>gb|BC068833.1| Xenopus laevis hypothetical protein MGC81474, mRNA (cDNA clone MGC:81474 IMAGE:6636444), complete cds Length = 3329 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccagtgcagaagttctgagg 351 |||||||||||||||||||| Sbjct: 1270 ccagtgcagaagttctgagg 1289 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccagtgcagaagttctgagg 351 |||||||||||||||||||| Sbjct: 507 ccagtgcagaagttctgagg 526
>gb|AC165294.4| Mus musculus BAC clone RP23-115J11 from chromosome 5, complete sequence Length = 205776 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 tttttcttgtcagtgggagaggcc 412 |||||||| ||||||||||||||| Sbjct: 112092 tttttcttctcagtgggagaggcc 112115
>gb|AC161323.3| Loxodonta africana clone VMRC15-565O11, complete sequence Length = 92964 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 86263 catgatgttgcttattggtc 86244 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccatgatgttgcttattggt 106 |||||||||||||||||||| Sbjct: 22484 ccatgatgttgcttattggt 22503
>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence Length = 211758 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttaacatggattctattgtt 246 |||||||||||||||||||| Sbjct: 136115 ttaacatggattctattgtt 136134
>gb|AC073864.29| Homo sapiens 12 BAC RP11-227B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138262 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttcatccaggacttggag 132 |||||||||||||||||||| Sbjct: 71701 gcttcatccaggacttggag 71720
>gb|AC115752.8| Mus musculus chromosome 19, clone RP23-18M16, complete sequence Length = 214925 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 ctcatttcacaaagcttaacatgg 235 |||||| ||||||||||||||||| Sbjct: 198455 ctcattccacaaagcttaacatgg 198432
>gb|AC182031.3| Loxodonta africana clone VMRC15-513A9, complete sequence Length = 58986 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 56526 catgatgttgcttattggtc 56507 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 49179 catgatgttgcttattggtc 49198
>emb|BX005414.13| Zebrafish DNA sequence from clone DKEY-21C19 in linkage group 23, complete sequence Length = 236036 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ttttagaaggacatgctggg 169 |||||||||||||||||||| Sbjct: 219184 ttttagaaggacatgctggg 219165
>gb|AC153760.3| Loxodonta africana clone VMRC15-151E6, complete sequence Length = 130127 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 32871 catgatgttgcttattggtc 32890
>gb|AC156374.3| Loxodonta africana clone VMRC15-462M16, complete sequence Length = 88098 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 40097 catgatgttgcttattggtc 40116 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 32381 catgatgttgcttattggtc 32400
>gb|AC055761.11| Homo sapiens 3 BAC RP11-73L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148114 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gagcttcatccaggacttgg 130 |||||||||||||||||||| Sbjct: 130635 gagcttcatccaggacttgg 130616
>gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, complete sequence Length = 167263 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 agaggaacatagtttttctt 396 |||||||||||||||||||| Sbjct: 160330 agaggaacatagtttttctt 160349
>gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete sequence Length = 123158 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 117857 catgatgttgcttattggtc 117876 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 7312 catgatgttgcttattggtc 7293
>gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete sequence Length = 147688 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 46410 catgatgttgcttattggtc 46391 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 21462 catgatgttgcttattggtc 21443
>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197909 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gaacatagtttttcttgtca 400 |||||||||||||||||||| Sbjct: 27787 gaacatagtttttcttgtca 27768
>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence Length = 136822 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 109197 catgatgttgcttattggtc 109178
>emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in linkage group 7, complete sequence Length = 152617 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ttttagaaggacatgctggg 169 |||||||||||||||||||| Sbjct: 79790 ttttagaaggacatgctggg 79771
>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR22N13, complete sequence Length = 177376 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tggattctattgttatggct 252 |||||||||||||||||||| Sbjct: 60561 tggattctattgttatggct 60542
>emb|AJ505946.1|CPA505946 Carica papaya partial mRNA for putative trehalose-6-phosphate synthase (t6PS gene) Length = 257 Score = 40.1 bits (20), Expect = 6.5 Identities = 49/59 (83%) Strand = Plus / Plus Query: 13 atgaatgaggctatttcaatgtctgatnaggagaagcagctgaggcacgagaagcatta 71 |||||||| || ||||| ||| ||||| ||||||||| || |||| ||||||||||| Sbjct: 171 atgaatgaagcaatttcgatggctgatgccgagaagcagttgcggcatgagaagcatta 229
>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the complete sequence Length = 214365 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tggattctattgttatggct 252 |||||||||||||||||||| Sbjct: 40185 tggattctattgttatggct 40166
>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete sequence Length = 205834 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 agaggaacatagtttttctt 396 |||||||||||||||||||| Sbjct: 71169 agaggaacatagtttttctt 71188
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence Length = 162405 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ggcttgcaaggaccatttta 154 |||||||||||||||||||| Sbjct: 99619 ggcttgcaaggaccatttta 99600
>gb|AC156458.1| Loxodonta africana, clone Loxodonta africana-6767875B22, complete sequence Length = 38495 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 22733 catgatgttgcttattggtc 22752
>gb|AC156013.1| Loxodonta africana, clone Loxodonta africana-6767875I4, complete sequence Length = 37005 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 58 catgatgttgcttattggtc 77
>gb|AC155902.1| Loxodonta africana, clone Loxodonta africana-6767875L18, complete sequence Length = 37635 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 catgatgttgcttattggtc 107 |||||||||||||||||||| Sbjct: 27095 catgatgttgcttattggtc 27076
>dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320, anti-oncogene region, section 3/3 Length = 254437 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 agaggaacatagtttttctt 396 |||||||||||||||||||| Sbjct: 44569 agaggaacatagtttttctt 44550
>dbj|AB026899.1| Homo sapiens DNA, DLEC1 to ORCTL4 gene region, section 2/2 (downstream sequence from ORCTL4) Length = 80485 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 agaggaacatagtttttctt 396 |||||||||||||||||||| Sbjct: 7240 agaggaacatagtttttctt 7221 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,953,919 Number of Sequences: 3902068 Number of extensions: 3953919 Number of successful extensions: 83474 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83262 Number of HSP's gapped (non-prelim): 200 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
