ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20e21 |
|---|---|
| Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 247 bits (630), Expect(2) = 1e-66 Identities = 128/179 (71%), Positives = 141/179 (78%), Gaps = 8/179 (4%) Frame = +3 Query: 3 FAVRAMSQG----AVQGLPIDLRGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVP 170 F+ +AMS+ A GLPIDLRGKRAFIAG+ADDNGYGW EILVGTWVP Sbjct: 68 FSTKAMSESSESKASSGLPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 127 Query: 171 ALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKW 350 ALNIFETSLRRGKFD+SR LPDGSLMEI KVYPLDAVFD+ EDVPEDVKANKRYAGSS W Sbjct: 128 ALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNW 187 Query: 351 TVKEVAETVKDDFGSIDILVHSLANGPEVTKPLLETSKKW----VSCCSFSI*LLIHLF 515 TV+E AE V+ DFGSIDILVHSLANGPEV+KPLLETS+K +S S+S L+ F Sbjct: 188 TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 246 Score = 25.8 bits (55), Expect(2) = 1e-66 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +2 Query: 515 LLQHFLPIMNP 547 LL HFLPIMNP Sbjct: 242 LLSHFLPIMNP 252
>FABI_SYNY3 (P73016) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 258 Score = 38.1 bits (87), Expect = 0.016 Identities = 32/125 (25%), Positives = 55/125 (44%) Frame = +3 Query: 48 IDLRGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVPALNIFETSLRRGKFDESRK 227 +DL GK AF+ G+A++ W EI V +++P +G+F++ Sbjct: 2 LDLSGKHAFVTGIANNRSIAWGIAQQLHQAGAEIGV-SYLPD--------EKGRFEK--- 49 Query: 228 LPDGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDIL 407 + E+T+ PL DV +D + V + +VK+ +G +DIL Sbjct: 50 ----KVRELTE--PLHPTLVLPGDVQDDAQ------------VDALFHSVKEKWGKLDIL 91 Query: 408 VHSLA 422 +H LA Sbjct: 92 IHCLA 96
>FABI_AQUAE (O67505) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 270 Score = 35.8 bits (81), Expect = 0.082 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 2/140 (1%) Frame = +3 Query: 54 LRGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVPALNIFETSLRRGKFDESRKLP 233 L GKRA I GVA++ + ++ P L Sbjct: 4 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKL------------------- 44 Query: 234 DGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDILVH 413 + + EI K + D V + ED+K K++ +++++GS+DI+VH Sbjct: 45 EKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKF--------------LEENWGSLDIIVH 90 Query: 414 SLANGP--EVTKPLLETSKK 467 S+A P E +++TS++ Sbjct: 91 SIAYAPKEEFKGGVIDTSRE 110
>FABI_ANASP (Q05069) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 258 Score = 35.0 bits (79), Expect = 0.14 Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 2/141 (1%) Frame = +3 Query: 48 IDLRGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVPALNIFETSLRRGKFDESRK 227 ++L GK A + G+A++ W + + T++P RGKF++ Sbjct: 2 LNLTGKNALVTGIANNRSIAWGIAQQLHAAGANLGI-TYLPD--------ERGKFEK--- 49 Query: 228 LPDGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDIL 407 KV L + +P +V+ +++ ++ +T++D +G +DIL Sbjct: 50 ----------KVSELVEPLNPSLFLPCNVQNDEQ--------IQSTFDTIRDKWGRLDIL 91 Query: 408 VHSL--ANGPEVTKPLLETSK 464 +H L AN ++T +TS+ Sbjct: 92 IHCLAFANRDDLTGDFSQTSR 112
>FABI_HELPY (O24990) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 275 Score = 33.9 bits (76), Expect = 0.31 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 357 KEVAETVKDDFGSIDILVHSLANGPE--VTKPLLETSK 464 K + +VK D GS+D +VHS+A P+ + LLETSK Sbjct: 72 KSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSK 109
>FABI_HELPJ (Q9ZMN7) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 275 Score = 33.5 bits (75), Expect = 0.41 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = +3 Query: 357 KEVAETVKDDFGSIDILVHSLANGPE--VTKPLLETSK 464 K + +K D GS+D +VHS+A P+ + LLETSK Sbjct: 72 KSLYNNIKQDLGSLDFIVHSVAFAPKEALEGSLLETSK 109
>FABI1_RHIME (P58380) Enoyl-[acyl-carrier-protein] reductase [NADH] 1 (EC| 1.3.1.9) (NADH-dependent enoyl-ACP reductase 1) Length = 272 Score = 32.0 bits (71), Expect = 1.2 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 6/143 (4%) Frame = +3 Query: 54 LRGKRAFIAGVADDNGYGWXXXXXXXXXXXEILVGTWVPALNIFETSLRRGKFDESRKLP 233 + GKR I GVA++ W EI + TW +L++ +++L Sbjct: 8 MNGKRGVIMGVANNRSIAWGIAKALAEAGAEIAL-TWQ------GDALKKRVEPLAQEL- 59 Query: 234 DGSLM----EITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSID 401 G+ M ++T + +DAVF +LE+ KW G ID Sbjct: 60 -GAFMAGHCDVTDLATIDAVFSALEE---------------KW-------------GKID 90 Query: 402 ILVHSLA--NGPEVTKPLLETSK 464 +VH++A + E+T L+TS+ Sbjct: 91 FVVHAIAFSDKDELTGRYLDTSR 113
>Y048_HAEIN (P44481) Putative oxidoreductase HI0048 (EC 1.-.-.-)| Length = 285 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 14/104 (13%) Frame = +3 Query: 270 LDAVFDSLEDVPEDVKANKRYAGSSKWTV------KEVAETVKDDFGSIDILVHSL-ANG 428 LD F++ + V +++ + A + K V KEV ++ DFG+ DIL++ N Sbjct: 45 LDLNFEAADKVAKEINQSGGKAKAYKTNVLELENIKEVRNQIETDFGTCDILINGAGGNN 104 Query: 429 PEVTK-------PLLETSKKWVSCCSFSI*LLIHLFYFSTSFPS 539 P+ T L ET++ + I + +L Y + P+ Sbjct: 105 PKATTDNEFHQFDLNETTRTFFDLDKSGIEFVFNLNYLGSLLPT 148
>MGR7_PONPY (Q5RDQ8) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 922 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Frame = -1 Query: 278 CIQWVDFSNLHKGSIRQLP*FVKLSTSQACLEYVQCRHPCTNKNFSTSCSKSLCYCPAIT 99 CI W+ F +P F + S L Y+Q + N S S + + Y P + Sbjct: 798 CIVWLAF----------IPIFFGTAQSAEKL-YIQTTTLTISMNLSASVALGMLYMPKVY 846 Query: 98 IIISN-----SSNKCSFTSEINGEALDSSLRHRPDGK 3 III + K SF + + + S L H+P + Sbjct: 847 IIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDR 883
>MGR7_RAT (P35400) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Frame = -1 Query: 278 CIQWVDFSNLHKGSIRQLP*FVKLSTSQACLEYVQCRHPCTNKNFSTSCSKSLCYCPAIT 99 CI W+ F +P F + S L Y+Q + N S S + + Y P + Sbjct: 798 CIVWLAF----------IPIFFGTAQSAEKL-YIQTTTLTISMNLSASVALGMLYMPKVY 846 Query: 98 IIISN-----SSNKCSFTSEINGEALDSSLRHRPDGK 3 III + K SF + + + S L H+P + Sbjct: 847 IIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDR 883
>MGR7_MOUSE (Q68ED2) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Frame = -1 Query: 278 CIQWVDFSNLHKGSIRQLP*FVKLSTSQACLEYVQCRHPCTNKNFSTSCSKSLCYCPAIT 99 CI W+ F +P F + S L Y+Q + N S S + + Y P + Sbjct: 798 CIVWLAF----------IPIFFGTAQSAEKL-YIQTTTLTISMNLSASVALGMLYMPKVY 846 Query: 98 IIISN-----SSNKCSFTSEINGEALDSSLRHRPDGK 3 III + K SF + + + S L H+P + Sbjct: 847 IIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDR 883
>MGR7_HUMAN (Q14831) Metabotropic glutamate receptor 7 precursor (mGluR7)| Length = 915 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Frame = -1 Query: 278 CIQWVDFSNLHKGSIRQLP*FVKLSTSQACLEYVQCRHPCTNKNFSTSCSKSLCYCPAIT 99 CI W+ F +P F + S L Y+Q + N S S + + Y P + Sbjct: 798 CIVWLAF----------IPIFFGTAQSAEKL-YIQTTTLTISMNLSASVALGMLYMPKVY 846 Query: 98 IIISN-----SSNKCSFTSEINGEALDSSLRHRPDGK 3 III + K SF + + + S L H+P + Sbjct: 847 IIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDR 883
>FLIG_AQUAE (O66891) Flagellar motor switch protein fliG| Length = 328 Score = 30.8 bits (68), Expect = 2.6 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +3 Query: 210 FDESRKLPDGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEVAETVK 380 F++ RKL D ++EI KV + + +L PED+K K + SK K E ++ Sbjct: 239 FEDIRKLSDRDIIEILKVVDKNTLMIALLGAPEDIK-QKFLSNMSKRAAKLFLEDME 294
>PGK_PSEPK (Q88D64) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 387 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +3 Query: 300 VPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDILVHSLANGPEVTK 443 +P DV K +A S++ TVK +A+ DD +DI + AN E+ K Sbjct: 253 LPVDVVVAKEFAESAEATVKAIADVAADDM-ILDIGPQTAANFAELLK 299
>WETA_PENCH (Q01870) Regulatory protein wetA| Length = 499 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = +3 Query: 234 DGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWT 353 D +L + +++PLD++ D+P V KR+ W+ Sbjct: 29 DSALSDFDQLFPLDSLSSDCGDLPPTVSTPKRHQSPQPWS 68
>CP190_DROME (Q24478) Centrosome-associated zinc finger protein CP190 (DMAP190)| (Protein enhancer of mod(mdg4)4-1) Length = 1096 Score = 29.6 bits (65), Expect = 5.9 Identities = 23/83 (27%), Positives = 35/83 (42%) Frame = +3 Query: 186 ETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDSLEDVPEDVKANKRYAGSSKWTVKEV 365 E S + K D+ R L E+T + D D ++D P + A K+ Sbjct: 776 EQSNKEPKSDKPRDDISEKLKELTGDWTEDENDDDVDDKPATAELASELAN------KDP 829 Query: 366 AETVKDDFGSIDILVHSLANGPE 434 TV ++ ID+ + SL GPE Sbjct: 830 EPTVHEEEDDIDLALQSLHKGPE 852
>Y462_CLOAB (Q97LU2) Putative reductase CAC0462 (EC 1.3.1.-)| Length = 398 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 342 SKWTVKEVAETVKDDFGSIDILVHSLA 422 S T +V + +KD+FG ID+ V+SLA Sbjct: 114 SNETKDKVIKYIKDEFGKIDLFVYSLA 140
>NDUAC_HUMAN (Q9UI09) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 12 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase subunit B17.2) (Complex I-B17.2) (CI-B17.2) (CIB17.2) (13 kDa differentiation-associated protein) Length = 145 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = +3 Query: 321 NKRYAGSSKWTVKEVAETVKDDFGSID---------ILVHSLANGPEVTKPLLETSKKWV 473 NK++ G +W V K+ F +D +HS+ + P TKPL T++K++ Sbjct: 52 NKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMTDDPPTTKPL--TARKFI 109
>MT_GOBCO (Q800D3) Metallothionein (MT)| Length = 60 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 173 CRHPCTNKNFS-TSCSKSLCYCPAITIIISNSSNKCSFTSEINGEALDSS 27 C CT KN S TSC KS C C + +KC+ G+ D+S Sbjct: 14 CGGSCTCKNCSCTSCKKSCCSC------CPSGCSKCASGCVCKGKTCDTS 57
>Y014_RICPR (Q9ZEC9) Hypothetical protein RP014| Length = 299 Score = 29.3 bits (64), Expect = 7.7 Identities = 29/112 (25%), Positives = 44/112 (39%) Frame = -1 Query: 404 DINAAKIILHSFSNFLHSPF*GPRVPLICFDIFRNILQGVKNCIQWVDFSNLHKGSIRQL 225 D+N AKI+L F+ F P + +I N+ +K + D N +I+ + Sbjct: 144 DLNNAKILLQEFAQIFIKNF-----PQLQKEINNNLPIALKELNKLQDIKNNEFRTIKDI 198 Query: 224 P*FVKLSTSQACLEYVQCRHPCTNKNFSTSCSKSLCYCPAITIIISNSSNKC 69 + LS S EY KSL Y + +I S+NKC Sbjct: 199 ---ILLSDSS---EYFFLNTNIKTAKLYRESQKSLRYISKLEELIKGSNNKC 244
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 252 ITKVYPLDAVFDSL-EDVPEDVKANKRYAGSSKW 350 +TK YP+ FD L ED+P+ + R A + W Sbjct: 1070 VTKAYPVSGCFDYLSEDLPDTIHIGGRIAPKTVW 1103
>HEM3_KLULA (Q6CT60) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 327 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = +3 Query: 330 YAGSSKWTVKEVAETV-KDDFGSIDILVHSLANGP 431 + G + WT KE+ + + KDD ID++VHSL + P Sbjct: 57 FGGKAVWT-KELEDLLYKDDESRIDLIVHSLKDMP 90
>GUXA_CELFI (P50401) Exoglucanase A precursor (EC 3.2.1.91)| (Exocellobiohydrolase A) (1,4-beta-cellobiohydrolase A) (CBP95) Length = 872 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 Query: 333 AGSSKWTVKEVAETVKDDFGSIDILVHSLANGPEVTKPLLETS 461 AG S EVA++ F SID V +AN + +PLL S Sbjct: 244 AGPSATLFAEVAKSTTAGFASIDGFVSDVANTTPLEEPLLSDS 286
>GATB_BIFLO (Q8G769) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 499 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +3 Query: 285 DSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDILVHSLANGPEVTK 443 D+L+ + E VKA + AG+ KW + E++ S++ L + A+ EV K Sbjct: 347 DALDLIEETVKAGAKAAGARKWWLGELSREANAKGVSLEELPITPADVAEVEK 399
>PRP45_DEBHA (Q6BV91) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing| protein 45) Length = 341 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +3 Query: 285 DSLEDVPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDILVHSLANGPE 434 DSL++ ED KA + K V E KDD I ++L N PE Sbjct: 116 DSLKECVEDTKAAINKMINEKMGVDEKTNNKKDDVTYIKYTSNNLVNDPE 165
>PGK_PSEAE (Q9I5Y4) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 387 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +3 Query: 300 VPEDVKANKRYAGSSKWTVKEVAETVKDDFGSIDILVHSLANGPEVTKPLLETSK 464 +P DV K +A S+ TVK +AE DD +DI + A E LL+TSK Sbjct: 253 LPVDVVVAKEFAESAVATVKAIAEVADDDM-ILDIGPQTAAQFAE----LLKTSK 302 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,745,812 Number of Sequences: 219361 Number of extensions: 1361619 Number of successful extensions: 4420 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4417 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
