| Clone Name | bags20e15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein Length = 2654 Score = 959 bits (484), Expect = 0.0 Identities = 532/548 (97%) Strand = Plus / Plus Query: 18 cttcaagaaagtcgtattgtcaggatcatgcgcaagagacttgttaggaagacttttgat 77 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 cttcaagaaagtcgcattgtcaggatcatgcgcaagagacttgttaggaagacttttgat 1490 Query: 78 atgattcaggatattgctgacaaggatgagaaggaggactacaagaaattttgggagagc 137 ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 1491 atgattcaggatattgctgacaaggataacaaggaggactacaagaaatttggggagagc 1550 Query: 138 tttggcaaatttatgaaacttggttgcattgaggactcaggaaatcagaagcgccttgct 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1551 tttggcaaatttatgaaacttggttgcattgaggactcaggaaatcagaagcgccttgct 1610 Query: 198 cctttgctgcggttttattcctccaaaaatgagacggatttgataagtctcgatcagtat 257 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1611 cctttgctgcggttttattcctccaaaaatgaaacggatttgataagtctcgatcagtat 1670 Query: 258 gtggagaatatgcccgagacccaaaaggcaatctattatattgctacagatagtcttcag 317 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1671 gtggagaatatgcccgagacccaaaaggcaatctattatattgccacagatagtcttcag 1730 Query: 318 agtgcaaagactgctcctttcttggagaagctgcttcagaaagatattgaagttctctac 377 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1731 agtgcaaagaccgctccattcttggaaaagctgcttcagaaagatattgaagttctctac 1790 Query: 378 cttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaagagaaaaag 437 ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1791 cttattgagccgattgatgaggtagccattcagaatctgcagacatacaaagagaaaaag 1850 Query: 438 tttgttgatatcagcaaggaagacctagaattgggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 tttgttgatatcagcaaggaagacctagaattgggcgatgaggatgaggacaaggaagaa 1910 Query: 498 agcaagcaggaatacactcttctttgtgactggataaagcagcagctaggtgacaaagtt 557 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1911 accaagcaggaatacactcttctttgtgactggataaagcagcagctgggtgacaaagtt 1970 Query: 558 gcaaaggt 565 || ||||| Sbjct: 1971 gccaaggt 1978
>ref|XM_483065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2702 Score = 462 bits (233), Expect = e-127 Identities = 449/521 (86%) Strand = Plus / Plus Query: 45 atgcgcaagagacttgttaggaagacttttgatatgattcaggatattgctgacaaggat 104 ||||| |||||||||||||||||||| |||||||||||| |||| ||| |||| |||||| Sbjct: 1490 atgcgaaagagacttgttaggaagacatttgatatgattgaggagatttctgaaaaggat 1549 Query: 105 gagaaggaggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgc 164 || |||||||| |||||||| || ||||||||||||||||| || || |||||||||||| Sbjct: 1550 gacaaggaggattacaagaagttctgggagagctttggcaagttcatcaaacttggttgc 1609 Query: 165 attgaggactcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaa 224 ||||||||| | |||||||| ||||| ||||| ||| ||||||| || | | || ||| Sbjct: 1610 attgaggacaccggaaatcacaagcgtcttgcacctctgctgcgtttccacacttctaaa 1669 Query: 225 aatgagacggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaag 284 |||||| |||||||||||||| ||||| ||||| || || ||||| |||| |||||| Sbjct: 1670 aatgagggagatttgataagtcttgatcaatatgtagaaaacatgccagagaaccaaaaa 1729 Query: 285 gcaatctattatattgctacagatagtcttcagagtgcaaagactgctcctttcttggag 344 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | || Sbjct: 1730 gcaatctattacattgctacagatagtctccagagtgcaaagactgctcctttcctagaa 1789 Query: 345 aagctgcttcagaaagatattgaagttctctaccttatcgaaccgattgatgaggtagct 404 ||| || |||||||||| ||||||||||||||||| || || || || |||||||| || Sbjct: 1790 aagttggttcagaaagacattgaagttctctacctcattgagccaatagatgaggttgcc 1849 Query: 405 attcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagcaaggaagaccta 464 ||||||||| ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 1850 attcagaatttgcagacctataaagagaagaagtttgttgatatcagcaaagaggacctg 1909 Query: 465 gaattgggcgatgaggatgaggacaaggaagaaagcaagcaggaatacactcttctttgt 524 || ||||| ||||| ||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 1910 gagttgggtgatgaagatgaggacaataaggaaagcaaacaggaatacactcttctgtgt 1969 Query: 525 gactggataaagcagcagctaggtgacaaagttgcaaaggt 565 |||||| |||| |||||||| |||||||| || |||||||| Sbjct: 1970 gactgggtaaaacagcagcttggtgacaaggtagcaaaggt 2010
>dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K17, full insert sequence Length = 2702 Score = 462 bits (233), Expect = e-127 Identities = 449/521 (86%) Strand = Plus / Plus Query: 45 atgcgcaagagacttgttaggaagacttttgatatgattcaggatattgctgacaaggat 104 ||||| |||||||||||||||||||| |||||||||||| |||| ||| |||| |||||| Sbjct: 1490 atgcgaaagagacttgttaggaagacatttgatatgattgaggagatttctgaaaaggat 1549 Query: 105 gagaaggaggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgc 164 || |||||||| |||||||| || ||||||||||||||||| || || |||||||||||| Sbjct: 1550 gacaaggaggattacaagaagttctgggagagctttggcaagttcatcaaacttggttgc 1609 Query: 165 attgaggactcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaa 224 ||||||||| | |||||||| ||||| ||||| ||| ||||||| || | | || ||| Sbjct: 1610 attgaggacaccggaaatcacaagcgtcttgcacctctgctgcgtttccacacttctaaa 1669 Query: 225 aatgagacggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaag 284 |||||| |||||||||||||| ||||| ||||| || || ||||| |||| |||||| Sbjct: 1670 aatgagggagatttgataagtcttgatcaatatgtagaaaacatgccagagaaccaaaaa 1729 Query: 285 gcaatctattatattgctacagatagtcttcagagtgcaaagactgctcctttcttggag 344 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | || Sbjct: 1730 gcaatctattacattgctacagatagtctccagagtgcaaagactgctcctttcctagaa 1789 Query: 345 aagctgcttcagaaagatattgaagttctctaccttatcgaaccgattgatgaggtagct 404 ||| || |||||||||| ||||||||||||||||| || || || || |||||||| || Sbjct: 1790 aagttggttcagaaagacattgaagttctctacctcattgagccaatagatgaggttgcc 1849 Query: 405 attcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagcaaggaagaccta 464 ||||||||| ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 1850 attcagaatttgcagacctataaagagaagaagtttgttgatatcagcaaagaggacctg 1909 Query: 465 gaattgggcgatgaggatgaggacaaggaagaaagcaagcaggaatacactcttctttgt 524 || ||||| ||||| ||||||||||| | |||||||| ||||||||||||||||| ||| Sbjct: 1910 gagttgggtgatgaagatgaggacaataaggaaagcaaacaggaatacactcttctgtgt 1969 Query: 525 gactggataaagcagcagctaggtgacaaagttgcaaaggt 565 |||||| |||| |||||||| |||||||| || |||||||| Sbjct: 1970 gactgggtaaaacagcagcttggtgacaaggtagcaaaggt 2010
>gb|AY106328.1| Zea mays PCO125641 mRNA sequence Length = 1769 Score = 430 bits (217), Expect = e-117 Identities = 478/563 (84%), Gaps = 4/563 (0%) Strand = Plus / Plus Query: 6 ctcgtgagnatccttcaagaaagtcgtattgtcaggatcatgcgcaagagacttgttagg 65 |||||||| ||||||||||||||| | |||||||| || ||||| ||||||||||||||| Sbjct: 577 ctcgtgag-atccttcaagaaagtagaattgtcagaattatgcgtaagagacttgttagg 635 Query: 66 aagacttttgatatgattcaggatattgctgacaaggatgagaaggaggactacaagaaa 125 ||||| ||||| |||||||| || ||||| || ||||||| || ||||||||||| ||| Sbjct: 636 aagacatttgacatgattcaagagattgccgagaaggatggcaaagaggactacaacaaa 695 Query: 126 ttttgggagagctttggcaaatttatgaaacttggttgcattgaggactcaggaaatcag 185 || ||||||||||||||||| || ||||| ||||||||||| |||||| ||||||| || Sbjct: 696 ttctgggagagctttggcaagttcatgaagcttggttgcatcgaggacacaggaaaccac 755 Query: 186 aagcgccttgctcctttgctgcggttttattcctccaaaaatgagacggatttgataagt 245 ||||| ||||| || |||||| | || || || |||||||| ||||| ||||| |||||| Sbjct: 756 aagcgtcttgcaccattgctgagattctactcttccaaaaacgagacagatttaataagt 815 Query: 246 ctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatctattatattgctaca 305 || || |||||||| || || ||||| || | ||| ||||| ||||||||||| ||||| Sbjct: 816 ctggaccagtatgtagaaaacatgcctgaaaaccagaaggcgatctattatatcgctact 875 Query: 306 gatagtcttcagagtgcaaagactgctcctttcttggagaagctgcttcagaaagatatt 365 |||||||| ||||| || |||||||||||||||||||| |||||| |||||||||||||| Sbjct: 876 gatagtctccagagcgcgaagactgctcctttcttggaaaagctggttcagaaagatatt 935 Query: 366 gaagttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtac 425 || ||||| ||||| || || || ||||||||||| || ||||||||| | ||||| ||| Sbjct: 936 gaggttctttacctcattgagccaattgatgaggttgccattcagaatttacagacatac 995 Query: 426 aaagagaaaaagtttgttgatatcagcaaggaagacctagaattgggcgatgaggatgag 485 |||||||| |||||||| ||||| ||||| || || | |||||||| ||||| |||||| Sbjct: 996 aaagagaagaagtttgtagatattagcaaagaggatttggaattgggtgatgaagatgag 1055 Query: 486 gacaagg---aagaaagcaagcaggaatacactcttctttgtgactggataaagcagcag 542 ||||||| |||||||||||||||| || |||||||| || |||||||||||||||||| Sbjct: 1056 gacaaggagaaagaaagcaagcaggagtatactcttctatgcgactggataaagcagcag 1115 Query: 543 ctaggtgacaaagttgcaaaggt 565 || || || ||||| || ||||| Sbjct: 1116 cttggcgataaagtcgccaaggt 1138
>dbj|AK073817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G01, full insert sequence Length = 2890 Score = 414 bits (209), Expect = e-112 Identities = 317/353 (89%) Strand = Plus / Plus Query: 18 cttcaagaaagtcgtattgtcaggatcatgcgcaagagacttgttaggaagacttttgat 77 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 1471 cttcaagaaagtcgtattgtcaggatcatgcgcaaaagacttgtcaggaagacatttgat 1530 Query: 78 atgattcaggatattgctgacaaggatgagaaggaggactacaagaaattttgggagagc 137 ||||||||||| |||||||| || || || |||||||||||||| |||||||||||||| Sbjct: 1531 atgattcaggagattgctgagaaagaggacaaggaggactacaaaaaattttgggagagt 1590 Query: 138 tttggcaaatttatgaaacttggttgcattgaggactcaggaaatcagaagcgccttgct 197 |||||||||||| | | |||||| |||||||||||| |||||||||| || ||||||||| Sbjct: 1591 tttggcaaatttgttagacttggctgcattgaggacacaggaaatcacaaacgccttgct 1650 Query: 198 cctttgctgcggttttattcctccaaaaatgagacggatttgataagtctcgatcagtat 257 ||| || |||||||||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 1651 cctctgttgcggttttactcttccaaaaatgagacagatttgataagtcttgatcagtat 1710 Query: 258 gtggagaatatgcccgagacccaaaaggcaatctattatattgctacagatagtcttcag 317 || ||||| ||||| || | ||||||||||||||| || ||||||||||| ||||||||| Sbjct: 1711 gtagagaacatgccagaaaaccaaaaggcaatctactacattgctacagacagtcttcag 1770 Query: 318 agtgcaaagactgctcctttcttggagaagctgcttcagaaagatattgaagt 370 |||||||||||||||||||||||||| ||| || |||| ||||| |||||||| Sbjct: 1771 agtgcaaagactgctcctttcttggaaaagttggttcaaaaagacattgaagt 1823 Score = 242 bits (122), Expect = 1e-60 Identities = 181/200 (90%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 369 gttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaa 428 ||||||||||||||||| |||||||||||||| || ||||||||| | ||||| |||||| Sbjct: 1914 gttctctaccttatcgagccgattgatgaggttgccattcagaatttacagacatacaaa 1973 Query: 429 gagaaaaagtttgttgatatcagcaaggaagacctagaattgggcgatgaggatgaggac 488 |||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct: 1974 gagaaaaaatttgttgatatcagcaaagaagacctggaattgggtgatgaagatgaggac 2033 Query: 489 aaggaa---gaaagcaagcaggaatacactcttctttgtgactggataaagcagcagcta 545 |||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 2034 aaggaaaatgagagcaagcaggaatacactcttctatgtgactggataaagcaacagctt 2093 Query: 546 ggtgacaaagttgcaaaggt 565 |||||||||||||| ||||| Sbjct: 2094 ggtgacaaagttgccaaggt 2113
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 299 bits (151), Expect = 5e-78 Identities = 232/259 (89%) Strand = Plus / Minus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||||||||| |||||||||||||| |||||||||||| | |||||||| |||||||||| Sbjct: 18097714 aggactacaaaaaattttgggagagttttggcaaatttgttaaacttggctgcattgagg 18097655 Query: 172 actcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaaaatgaga 231 || |||||||||| || |||||||||||| || |||||||||| || ||||||||||||| Sbjct: 18097654 acacaggaaatcacaaacgccttgctcctctgttgcggttttactcttccaaaaatgaga 18097595 Query: 232 cggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatct 291 | |||||||||||||| ||||||||||| ||||| ||||| || | |||||||||||||| Sbjct: 18097594 cagatttgataagtcttgatcagtatgtagagaacatgccagaaaaccaaaaggcaatct 18097535 Query: 292 attatattgctacagatagtcttcagagtgcaaagactgctcctttcttggagaagctgc 351 | || ||||||||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 18097534 actacattgctacagacagtcttcagagtgcaaagactgctcctttcttggaaaagttgg 18097475 Query: 352 ttcagaaagatattgaagt 370 |||| ||||| |||||||| Sbjct: 18097474 ttcaaaaagacattgaagt 18097456 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 369 gttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaa 428 ||||||||||||||||| |||||||||||||| || ||||||||| | ||||| |||||| Sbjct: 18097365 gttctctaccttatcgagccgattgatgaggttgccattcagaatttacagacatacaaa 18097306 Query: 429 gagaaaaagtttgttgatatcagcaaggaagacctagaattggg 472 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 18097305 gagaaaaaatttgttgatatcagcaaagaagacctggaattggg 18097262 Score = 113 bits (57), Expect = 6e-22 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaaggaa---gaaagcaagcaggaatacactcttctttgtgactgg 530 ||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 18097177 gatgaagatgaggacaaggaaaatgagagcaagcaggaatacactcttctatgtgactgg 18097118 Query: 531 ataaagcagcagctaggtgacaaagttgcaaaggt 565 |||||||| ||||| |||||||||||||| ||||| Sbjct: 18097117 ataaagcaacagcttggtgacaaagttgccaaggt 18097083 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 36 gtcaggatcatgcgcaagagacttgttaggaagacttttgatatgattcaggatattgct 95 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 18097868 gtcaggatcatgcgcaaaagacttgtcaggaagacatttgatatgattcaggagattgct 18097809 Query: 96 gacaaggatgagaaggagg 114 || || || || ||||||| Sbjct: 18097808 gagaaagaggacaaggagg 18097790 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cttcaagaaagtcgtattgt 37 |||||||||||||||||||| Sbjct: 18098003 cttcaagaaagtcgtattgt 18097984
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 299 bits (151), Expect = 5e-78 Identities = 232/259 (89%) Strand = Plus / Minus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||||||||| |||||||||||||| |||||||||||| | |||||||| |||||||||| Sbjct: 90836 aggactacaaaaaattttgggagagttttggcaaatttgttaaacttggctgcattgagg 90777 Query: 172 actcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaaaatgaga 231 || |||||||||| || |||||||||||| || |||||||||| || ||||||||||||| Sbjct: 90776 acacaggaaatcacaaacgccttgctcctctgttgcggttttactcttccaaaaatgaga 90717 Query: 232 cggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatct 291 | |||||||||||||| ||||||||||| ||||| ||||| || | |||||||||||||| Sbjct: 90716 cagatttgataagtcttgatcagtatgtagagaacatgccagaaaaccaaaaggcaatct 90657 Query: 292 attatattgctacagatagtcttcagagtgcaaagactgctcctttcttggagaagctgc 351 | || ||||||||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 90656 actacattgctacagacagtcttcagagtgcaaagactgctcctttcttggaaaagttgg 90597 Query: 352 ttcagaaagatattgaagt 370 |||| ||||| |||||||| Sbjct: 90596 ttcaaaaagacattgaagt 90578 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 369 gttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaa 428 ||||||||||||||||| |||||||||||||| || ||||||||| | ||||| |||||| Sbjct: 90487 gttctctaccttatcgagccgattgatgaggttgccattcagaatttacagacatacaaa 90428 Query: 429 gagaaaaagtttgttgatatcagcaaggaagacctagaattggg 472 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 90427 gagaaaaaatttgttgatatcagcaaagaagacctggaattggg 90384 Score = 113 bits (57), Expect = 6e-22 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaaggaa---gaaagcaagcaggaatacactcttctttgtgactgg 530 ||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 90299 gatgaagatgaggacaaggaaaatgagagcaagcaggaatacactcttctatgtgactgg 90240 Query: 531 ataaagcagcagctaggtgacaaagttgcaaaggt 565 |||||||| ||||| |||||||||||||| ||||| Sbjct: 90239 ataaagcaacagcttggtgacaaagttgccaaggt 90205 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 36 gtcaggatcatgcgcaagagacttgttaggaagacttttgatatgattcaggatattgct 95 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 90990 gtcaggatcatgcgcaaaagacttgtcaggaagacatttgatatgattcaggagattgct 90931 Query: 96 gacaaggatgagaaggagg 114 || || || || ||||||| Sbjct: 90930 gagaaagaggacaaggagg 90912 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cttcaagaaagtcgtattgt 37 |||||||||||||||||||| Sbjct: 91125 cttcaagaaagtcgtattgt 91106
>gb|AY104129.1| Zea mays PCO085355 mRNA sequence Length = 1075 Score = 276 bits (139), Expect = 7e-71 Identities = 305/359 (84%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 121 agaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg-actcagga 179 |||| |||||||||||||||||||| ||||| || ||||||||||| |||| || |||| Sbjct: 1 agaagttttgggagagctttggcaagtttatcaagcttggttgcatcgaggtacacaggg 60 Query: 180 aatcagaagcgccttgctcctttgctgcggttttattcctccaaaaatgagacggatttg 239 ||||| |||||||||||||| ||| |||| || | || || ||||| ||| |||||| Sbjct: 61 aatcacaagcgccttgctccattgttgcgcttccactcttctaaaaacgagggagatttg 120 Query: 240 ataagtctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatctattatatt 299 |||||||| ||||| ||||| |||| ||||| || | |||||||||||||| || || Sbjct: 121 ataagtcttgatcaatatgtagagagcatgcctgaaagtcaaaaggcaatctactacatc 180 Query: 300 gctacagatagtcttcagagtgcaaagactgctcctttcttggagaagctgcttcagaaa 359 |||||||||||||| |||||||||||||||||||||||| |||| |||||| | |||||| Sbjct: 181 gctacagatagtctccagagtgcaaagactgctcctttcctggaaaagctggtccagaaa 240 Query: 360 gatattgaagttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcag 419 ||||||||||||||||||||||| || ||||| |||||||| || |||||||| ||||| Sbjct: 241 gatattgaagttctctaccttattgagccgatagatgaggttgccattcagaacttgcag 300 Query: 420 acgtacaaagagaaaaagtttgttgatatcagcaaggaagacctagaattgggcgatga 478 || ||||||||||| || ||||| ||||||||||| || || || |||||||| ||||| Sbjct: 301 acctacaaagagaagaaatttgtggatatcagcaaagaggatctggaattgggtgatga 359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 212 bits (107), Expect = 9e-52 Identities = 221/259 (85%) Strand = Plus / Minus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| Sbjct: 24119183 aggattacaagaagttctgggagagctttggcaagttcatcaaacttggttgcattgagg 24119124 Query: 172 actcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaaaatgaga 231 || | |||||||| ||||| ||||| ||| ||||||| || | | || ||||||||| Sbjct: 24119123 acaccggaaatcacaagcgtcttgcacctctgctgcgtttccacacttctaaaaatgagg 24119064 Query: 232 cggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatct 291 |||||||||||||| ||||| ||||| || || ||||| |||| |||||| ||||||| Sbjct: 24119063 gagatttgataagtcttgatcaatatgtagaaaacatgccagagaaccaaaaagcaatct 24119004 Query: 292 attatattgctacagatagtcttcagagtgcaaagactgctcctttcttggagaagctgc 351 |||| ||||||||||||||||| |||||||||||||||||||||||| | || ||| || Sbjct: 24119003 attacattgctacagatagtctccagagtgcaaagactgctcctttcctagaaaagttgg 24118944 Query: 352 ttcagaaagatattgaagt 370 |||||||||| |||||||| Sbjct: 24118943 ttcagaaagacattgaagt 24118925 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaaggaagaaagcaagcaggaatacactcttctttgtgactggata 533 ||||| ||||||||||| | |||||||| ||||||||||||||||| ||||||||| || Sbjct: 24118646 gatgaagatgaggacaataaggaaagcaaacaggaatacactcttctgtgtgactgggta 24118587 Query: 534 aagcagcagctaggtgacaaagttgcaaaggt 565 || |||||||| |||||||| || |||||||| Sbjct: 24118586 aaacagcagcttggtgacaaggtagcaaaggt 24118555 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 369 gttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaa 428 ||||||||||| || || || || |||||||| || ||||||||| ||||||| || ||| Sbjct: 24118839 gttctctacctcattgagccaatagatgaggttgccattcagaatttgcagacctataaa 24118780 Query: 429 gagaaaaagtttgttgatatcagcaaggaagacctagaattggg 472 ||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 24118779 gagaagaagtttgttgatatcagcaaagaggacctggagttggg 24118736 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 45 atgcgcaagagacttgttaggaagacttttgatatgattcaggatattgctgacaaggat 104 ||||| |||||||||||||||||||| |||||||||||| |||| ||| |||| |||||| Sbjct: 24119327 atgcgaaagagacttgttaggaagacatttgatatgattgaggagatttctgaaaaggat 24119268 Query: 105 gagaaggagg 114 || ||||||| Sbjct: 24119267 gacaaggagg 24119258
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 212 bits (107), Expect = 9e-52 Identities = 221/259 (85%) Strand = Plus / Minus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| Sbjct: 72669 aggattacaagaagttctgggagagctttggcaagttcatcaaacttggttgcattgagg 72610 Query: 172 actcaggaaatcagaagcgccttgctcctttgctgcggttttattcctccaaaaatgaga 231 || | |||||||| ||||| ||||| ||| ||||||| || | | || ||||||||| Sbjct: 72609 acaccggaaatcacaagcgtcttgcacctctgctgcgtttccacacttctaaaaatgagg 72550 Query: 232 cggatttgataagtctcgatcagtatgtggagaatatgcccgagacccaaaaggcaatct 291 |||||||||||||| ||||| ||||| || || ||||| |||| |||||| ||||||| Sbjct: 72549 gagatttgataagtcttgatcaatatgtagaaaacatgccagagaaccaaaaagcaatct 72490 Query: 292 attatattgctacagatagtcttcagagtgcaaagactgctcctttcttggagaagctgc 351 |||| ||||||||||||||||| |||||||||||||||||||||||| | || ||| || Sbjct: 72489 attacattgctacagatagtctccagagtgcaaagactgctcctttcctagaaaagttgg 72430 Query: 352 ttcagaaagatattgaagt 370 |||||||||| |||||||| Sbjct: 72429 ttcagaaagacattgaagt 72411 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaaggaagaaagcaagcaggaatacactcttctttgtgactggata 533 ||||| ||||||||||| | |||||||| ||||||||||||||||| ||||||||| || Sbjct: 72132 gatgaagatgaggacaataaggaaagcaaacaggaatacactcttctgtgtgactgggta 72073 Query: 534 aagcagcagctaggtgacaaagttgcaaaggt 565 || |||||||| |||||||| || |||||||| Sbjct: 72072 aaacagcagcttggtgacaaggtagcaaaggt 72041 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 369 gttctctaccttatcgaaccgattgatgaggtagctattcagaatctgcagacgtacaaa 428 ||||||||||| || || || || |||||||| || ||||||||| ||||||| || ||| Sbjct: 72325 gttctctacctcattgagccaatagatgaggttgccattcagaatttgcagacctataaa 72266 Query: 429 gagaaaaagtttgttgatatcagcaaggaagacctagaattggg 472 ||||| |||||||||||||||||||| || ||||| || ||||| Sbjct: 72265 gagaagaagtttgttgatatcagcaaagaggacctggagttggg 72222 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 45 atgcgcaagagacttgttaggaagacttttgatatgattcaggatattgctgacaaggat 104 ||||| |||||||||||||||||||| |||||||||||| |||| ||| |||| |||||| Sbjct: 72813 atgcgaaagagacttgttaggaagacatttgatatgattgaggagatttctgaaaaggat 72754 Query: 105 gagaaggagg 114 || ||||||| Sbjct: 72753 gacaaggagg 72744
>gb|AY094422.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2596 Score = 71.9 bits (36), Expect = 2e-09 Identities = 150/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1668 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1727 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | |||||||| Sbjct: 1728 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccgatc 1787 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1788 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1847 Query: 453 aaggaaga 460 || ||||| Sbjct: 1848 aaagaaga 1855 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1914 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1960 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1506 gaggattacaagaaattctgggagaactttgg 1537
>ref|NM_179601.1| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding AT2G04030 (CR88) transcript variant AT2G04030.2 mRNA, complete cds Length = 2612 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1905 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1951 Score = 63.9 bits (32), Expect = 5e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1659 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1718 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | ||||| || Sbjct: 1719 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccaatc 1778 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1779 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1838 Query: 453 aaggaaga 460 || ||||| Sbjct: 1839 aaagaaga 1846
>ref|NM_126439.2| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding AT2G04030 (CR88) transcript variant AT2G04030.1 mRNA, complete cds Length = 2621 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1914 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1960 Score = 63.9 bits (32), Expect = 5e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1668 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1727 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | ||||| || Sbjct: 1728 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccaatc 1787 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1788 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1847 Query: 453 aaggaaga 460 || ||||| Sbjct: 1848 aaagaaga 1855 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1506 gaggattacaagaaattctgggagaactttgg 1537
>emb|Y11829.1|ATHSP881 A.thaliana hsp88.1 gene Length = 4544 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 3591 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 3637 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 384 gaaccgattgatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgtt 443 ||||| || ||||| || |||||||||||| |||| || |||||||| || || || ||| Sbjct: 3375 gaaccaatcgatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgtt 3434 Query: 444 gatatcagcaaggaaga 460 |||||||| || ||||| Sbjct: 3435 gatatcagtaaagaaga 3451 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 3183 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 3242 Query: 333 cctttcttggagaa 346 |||||||||||||| Sbjct: 3243 cctttcttggagaa 3256
>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete sequence Length = 103874 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 94163 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 94209 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 384 gaaccgattgatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgtt 443 ||||| || ||||| || |||||||||||| |||| || |||||||| || || || ||| Sbjct: 93947 gaaccaatcgatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgtt 94006 Query: 444 gatatcagcaaggaaga 460 |||||||| || ||||| Sbjct: 94007 gatatcagtaaagaaga 94023 Score = 44.1 bits (22), Expect = 0.49 Identities = 61/74 (82%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 93754 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 93813 Query: 333 cctttcttggagaa 346 |||||||||||||| Sbjct: 93814 cctttcttggagaa 93827
>gb|AF436826.1|AF436826 Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2610 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1914 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1960 Score = 63.9 bits (32), Expect = 5e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1668 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1727 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | ||||| || Sbjct: 1728 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccaatc 1787 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1788 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1847 Query: 453 aaggaaga 460 || ||||| Sbjct: 1848 aaagaaga 1855 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1506 gaggattacaagaaattctgggagaactttgg 1537
>gb|AY053403.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2507 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1899 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1945 Score = 63.9 bits (32), Expect = 5e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1653 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1712 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | ||||| || Sbjct: 1713 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccaatc 1772 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1773 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1832 Query: 453 aaggaaga 460 || ||||| Sbjct: 1833 aaagaaga 1840 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1491 gaggattacaagaaattctgggagaactttgg 1522
>emb|BX820811.1|CNS0A8OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 86 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 132
>gb|BT002234.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2343 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 516 cttctttgtgactggataaagcagcagctaggtgacaaagttgcaaa 562 ||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1831 cttctctgtgactggataaaacagcagctcggtgacaaagttgcaaa 1877 Score = 63.9 bits (32), Expect = 5e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 273 gagacccaaaaggcaatctattatattgctacagatagtcttcagagtgcaaagactgct 332 |||| ||||||||| ||||| || | || || ||||||||| | ||||| ||| |||| Sbjct: 1585 gagaaccaaaaggcgatctactacctcgcaactgatagtcttaaaagtgccaagtctgcc 1644 Query: 333 cctttcttggagaagctgcttcagaaagatattgaagttctctaccttatcgaaccgatt 392 |||||||||||||| || | || |||||||| || ||||| || | | ||||| || Sbjct: 1645 cctttcttggagaaactaatccaaaaagatatcgaggttctatatttggttgaaccaatc 1704 Query: 393 gatgaggtagctattcagaatctgcagacgtacaaagagaaaaagtttgttgatatcagc 452 ||||| || |||||||||||| |||| || |||||||| || || || ||||||||||| Sbjct: 1705 gatgaagttgctattcagaatttgcaaacctacaaagaaaagaaattcgttgatatcagt 1764 Query: 453 aaggaaga 460 || ||||| Sbjct: 1765 aaagaaga 1772 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1423 gaggattacaagaaattctgggagaactttgg 1454
>gb|AC156163.2| Mus musculus BAC clone RP24-122E11 from chromosome 9, complete sequence Length = 141660 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 tgctcctttcttggagaagctg 350 |||||||||||||||||||||| Sbjct: 10917 tgctcctttcttggagaagctg 10896
>ref|XM_369343.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06121.4) partial mRNA Length = 3717 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 471 ggcgatgaggatgaggacaaggaaga 496 |||||||||||||||||| ||||||| Sbjct: 3313 ggcgatgaggatgaggacgaggaaga 3338
>emb|AJ851579.1| Gallus gallus mRNA for hypothetical protein, clone 8c5 Length = 3027 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaa 494 |||||||||||||||||||||| Sbjct: 882 cgatgaggatgaggacaaggaa 903
>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete sequence Length = 219226 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 329 tgctcctttcttggagaagctg 350 |||||||||||||||||||||| Sbjct: 1419 tgctcctttcttggagaagctg 1440
>gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, complete sequence Length = 208396 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 aagactgctcctttcttggag 344 ||||||||||||||||||||| Sbjct: 65649 aagactgctcctttcttggag 65629
>ref|NM_177456.2| Homo sapiens melanoma antigen family C, 3 (MAGEC3), transcript variant 2, mRNA Length = 1707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgaggatgaggacaaggaaga 496 ||||||||||||||||||||| Sbjct: 710 tgaggatgaggacaaggaaga 690
>gb|BC103893.1| Homo sapiens melanoma antigen family C, 3, mRNA (cDNA clone MGC:119270 IMAGE:40005064), complete cds Length = 1290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgaggatgaggacaaggaaga 496 ||||||||||||||||||||| Sbjct: 293 tgaggatgaggacaaggaaga 273
>ref|XM_714839.1| Candida albicans SC5314 hypothetical protein (CaO19_233), mRNA Length = 399 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 caagcaggaatacactcttct 520 ||||||||||||||||||||| Sbjct: 21 caagcaggaatacactcttct 41
>ref|XM_656283.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3771.2), mRNA Length = 447 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gagaaggaggactacaagaaa 125 ||||||||||||||||||||| Sbjct: 241 gagaaggaggactacaagaaa 261
>emb|Z75526.1|CEC06H2 Caenorhabditis elegans Cosmid C06H2, complete sequence Length = 24281 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 aaaggcaatctattatattgc 301 ||||||||||||||||||||| Sbjct: 10617 aaaggcaatctattatattgc 10597
>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence Length = 225122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tgacaaggatgagaaggagga 115 ||||||||||||||||||||| Sbjct: 12328 tgacaaggatgagaaggagga 12348
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 ttggagaagctgcttcagaaa 359 ||||||||||||||||||||| Sbjct: 13571 ttggagaagctgcttcagaaa 13551
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete sequence Length = 178963 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 490 aggaagaaagcaagcaggaat 510 ||||||||||||||||||||| Sbjct: 119502 aggaagaaagcaagcaggaat 119522
>emb|AL035209.1|HS7H11 Human DNA sequence from clone XX-D7H11 on chromosome 1q32.2-32.3 Contains the 3' end of the MCP gene for membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) and the 3' end of a novel gene, complete sequence Length = 77551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 aaggaagacctagaattgggc 473 ||||||||||||||||||||| Sbjct: 41486 aaggaagacctagaattgggc 41466
>emb|AL022152.1|HS232G24 Human DNA sequence from clone RP6-232G24 on chromosome Xq27.1-27.3 Contains the MAGEC3 gene for MAGE family testis and tumor-specific protein-like and the MAGEC1 gene for melanoma antigen, family C, 1, complete sequence Length = 124497 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgaggatgaggacaaggaaga 496 ||||||||||||||||||||| Sbjct: 3943 tgaggatgaggacaaggaaga 3923
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6 Length = 213788 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 gttaggaagacttttgatatgattc 84 ||||||||||||||||||| ||||| Sbjct: 16969 gttaggaagacttttgataagattc 16945
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 gttaggaagacttttgatatgattc 84 ||||||||||||||||||| ||||| Sbjct: 188123 gttaggaagacttttgataagattc 188099
>emb|AJ300474.1|AHI300474 Antirrhinum hispanicum ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, s2-RNase gene, ORF9 and slf-S2 gene Length = 63687 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||| ||||||||||| ||||||| ||||| || ||| ||||| | ||||| ||||| | Sbjct: 63552 aggattacaagaaattctgggagaattttgggaagtttttgaaattaggttgtattgaag 63611 Query: 172 actcaggaaatca 184 || | |||||||| Sbjct: 63612 acactggaaatca 63624
>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182489 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 aaggaagacctagaattgggc 473 ||||||||||||||||||||| Sbjct: 78896 aaggaagacctagaattgggc 78876
>dbj|AK081858.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130082O20 product:unclassifiable, full insert sequence Length = 2625 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 aagactgctcctttcttggag 344 ||||||||||||||||||||| Sbjct: 837 aagactgctcctttcttggag 857
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 ttgtgactggataaagcagca 541 ||||||||||||||||||||| Sbjct: 28710717 ttgtgactggataaagcagca 28710737
>gb|AC132195.4| Polypterus bichir, clone -164C2, complete sequence Length = 115022 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 cttggagaagctgcttcagaaagat 362 ||||||||| ||||||||||||||| Sbjct: 54282 cttggagaaactgcttcagaaagat 54258
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1205_F02 Length = 112862 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 ttgtgactggataaagcagca 541 ||||||||||||||||||||| Sbjct: 18278 ttgtgactggataaagcagca 18298
>emb|AJ515536.1|AHI515536 Antirrhinum hispanicum slf-S5 gene for S locus F-box (SLF)-S5 protein and slf-S5A gene for S locus F-box (SLF)-S5A protein Length = 71543 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Minus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||| ||||||||||| ||||||| ||||| || ||| ||||| | ||||| ||||| | Sbjct: 34051 aggattacaagaaattctgggagaattttgggaagtttttgaaattaggttgtattgaag 33992 Query: 172 actcaggaaatca 184 || | |||||||| Sbjct: 33991 acactggaaatca 33979
>emb|AJ515535.1|AHI515535 Antirrhinum hispanicum slf-S1E gene for S locus F-box (SLF)-S1E protein and slf-S1 gene for S locus F-box (SLF)-S1 protein Length = 75183 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 112 aggactacaagaaattttgggagagctttggcaaatttatgaaacttggttgcattgagg 171 |||| ||||||||||| ||||||| ||||| || ||| ||||| | ||||| ||||| | Sbjct: 65534 aggattacaagaaattctgggagaattttgggaagtttttgaaattaggttgtattgaag 65593 Query: 172 actcaggaaatca 184 || | |||||||| Sbjct: 65594 acactggaaatca 65606
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 521 ttgtgactggataaagcagca 541 ||||||||||||||||||||| Sbjct: 85887 ttgtgactggataaagcagca 85907
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 520 tttgtgactggataaagcagc 540 ||||||||||||||||||||| Sbjct: 72650 tttgtgactggataaagcagc 72670
>emb|AL731695.11| Mouse DNA sequence from clone RP23-188M14 on chromosome X, complete sequence Length = 177098 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tgacaaggatgagaaggagga 115 ||||||||||||||||||||| Sbjct: 97424 tgacaaggatgagaaggagga 97444
>emb|AL833786.8| Mouse DNA sequence from clone RP23-220D12 on chromosome 2, complete sequence Length = 194536 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 gaggacaaggaagaaagcaag 503 ||||||||||||||||||||| Sbjct: 117761 gaggacaaggaagaaagcaag 117741
>ref|NM_111656.2| Arabidopsis thaliana ATP binding / unfolded protein binding AT3G07770 mRNA, complete cds Length = 2663 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 tttgttgatatcagcaaggaagac 461 ||||| |||||||||||||||||| Sbjct: 1875 tttgtagatatcagcaaggaagac 1898
>gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 106227 gatgaggatgaggacaagga 106208
>ref|XM_520170.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC464637), mRNA Length = 7563 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 6524 agtgcaaagactgctccttt 6543
>ref|NM_174856.1| Homo sapiens isocitrate dehydrogenase 3 (NAD+) beta (IDH3B), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA Length = 1645 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 aaagcagcagctaggtgaca 552 |||||||||||||||||||| Sbjct: 634 aaagcagcagctaggtgaca 615
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence Length = 232228 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ttttattcctccaaaaatga 229 |||||||||||||||||||| Sbjct: 77112 ttttattcctccaaaaatga 77131
>ref|XM_593595.2| PREDICTED: Bos taurus similar to Zinc finger protein 462 (LOC515561), mRNA Length = 1892 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 260 agtgcaaagactgctccttt 279
>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence Length = 108727 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 61253 gatgaggatgaggacaagga 61272
>ref|XM_423333.1| PREDICTED: Gallus gallus similar to Fasciculation and elongation protein zeta 1 (Zygin I) (LOC425587), partial mRNA Length = 1197 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 gggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||| |||||||| Sbjct: 551 gggcgatgaggatgaggaggaggaagaa 578
>ref|XM_878497.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 14 (LOC407220), mRNA Length = 4395 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 3200 cgatgaggatgatgacaaggaaga 3223
>ref|XM_878465.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 13 (LOC407220), mRNA Length = 4448 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 3253 cgatgaggatgatgacaaggaaga 3276
>ref|XM_583250.2| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 1 (LOC407220), mRNA Length = 3788 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2593 cgatgaggatgatgacaaggaaga 2616
>ref|XM_878393.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 12 (LOC407220), mRNA Length = 3656 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2461 cgatgaggatgatgacaaggaaga 2484
>ref|XM_878349.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 11 (LOC407220), mRNA Length = 3593 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2398 cgatgaggatgatgacaaggaaga 2421
>ref|XM_878311.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 10 (LOC407220), mRNA Length = 4798 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 3603 cgatgaggatgatgacaaggaaga 3626
>ref|XM_878271.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 9 (LOC407220), mRNA Length = 3650 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2455 cgatgaggatgatgacaaggaaga 2478
>ref|XM_878233.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 8 (LOC407220), mRNA Length = 3662 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2467 cgatgaggatgatgacaaggaaga 2490
>ref|XM_878195.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 7 (LOC407220), mRNA Length = 3711 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2516 cgatgaggatgatgacaaggaaga 2539
>ref|XM_878160.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 6 (LOC407220), mRNA Length = 2167 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 972 cgatgaggatgatgacaaggaaga 995
>ref|XM_878115.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 5 (LOC407220), mRNA Length = 2045 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 850 cgatgaggatgatgacaaggaaga 873
>ref|XM_878069.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 4 (LOC407220), mRNA Length = 3890 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 3200 cgatgaggatgatgacaaggaaga 3223
>ref|XM_878028.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 3 (LOC407220), mRNA Length = 4306 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 3111 cgatgaggatgatgacaaggaaga 3134
>ref|XM_877984.1| PREDICTED: Bos taurus hypothetical protein LOC407220, transcript variant 2 (LOC407220), mRNA Length = 3903 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 2708 cgatgaggatgatgacaaggaaga 2731
>gb|AY518896.1| Cricetulus griseus TATA-binding protein associated factor 7 (TAF7) mRNA, complete cds Length = 1312 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 660 acaaagagaaaaagtttgtt 679
>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence Length = 163442 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cttggagaagctgcttcaga 357 |||||||||||||||||||| Sbjct: 10078 cttggagaagctgcttcaga 10059
>gb|BC029673.1| Mus musculus TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone MGC:36036 IMAGE:5373242), complete cds Length = 1730 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 585 acaaagagaaaaagtttgtt 604
>ref|NM_011901.1| Mus musculus TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf7), mRNA Length = 1762 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 601 acaaagagaaaaagtttgtt 620
>ref|NM_175770.2| Mus musculus TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf7), mRNA Length = 2854 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 617 acaaagagaaaaagtttgtt 636
>ref|NM_021224.3| Homo sapiens zinc finger protein 462 (ZNF462), mRNA Length = 8310 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 6951 agtgcaaagactgctccttt 6970
>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1 through 3 and partial cds Length = 107840 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ttggagaagctgcttcagaa 358 |||||||||||||||||||| Sbjct: 39964 ttggagaagctgcttcagaa 39945
>gb|AC150661.6| Mus musculus BAC clone RP23-6A9 from chromosome 12, complete sequence Length = 234903 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 173669 gaggatgaggacaaggaaga 173650
>gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome 12, complete sequence Length = 224632 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 203864 gaggatgaggacaaggaaga 203883
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tgctgacaaggatgagaaggagga 115 |||||||||||||||||| ||||| Sbjct: 204084 tgctgacaaggatgagaaagagga 204107
>ref|XM_862381.1| PREDICTED: Canis familiaris similar to zinc finger protein 462, transcript variant 2 (LOC481655), mRNA Length = 4837 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 3500 agtgcaaagactgctccttt 3519
>ref|XM_538777.2| PREDICTED: Canis familiaris similar to zinc finger protein 462, transcript variant 1 (LOC481655), mRNA Length = 8270 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 6933 agtgcaaagactgctccttt 6952
>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence Length = 174600 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 cgatgaggatgaggacaaggaaga 496 |||||||||||| ||||||||||| Sbjct: 132933 cgatgaggatgaagacaaggaaga 132910
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 tttgttgatatcagcaaggaagac 461 ||||| |||||||||||||||||| Sbjct: 69009 tttgtagatatcagcaaggaagac 69032
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 tttgttgatatcagcaaggaagac 461 ||||| |||||||||||||||||| Sbjct: 34043 tttgtagatatcagcaaggaagac 34066
>gb|AC124511.4| Mus musculus BAC clone RP23-440I16 from chromosome 12, complete sequence Length = 179914 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 100281 gaggatgaggacaaggaaga 100300
>ref|XM_860183.1| PREDICTED: Canis familiaris similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 2 (LOC609225), mRNA Length = 1201 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaaggaagaa 497 |||||||||||||| ||||||||| Sbjct: 676 gatgaggatgaggagaaggaagaa 699
>ref|XM_847123.1| PREDICTED: Canis familiaris similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30), transcript variant 1 (LOC609225), mRNA Length = 1156 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaaggaagaa 497 |||||||||||||| ||||||||| Sbjct: 676 gatgaggatgaggagaaggaagaa 699
>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence Length = 227048 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 161281 gaggatgaggacaaggaaga 161300
>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence Length = 111276 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gatgaggacaaggaagaaag 499 |||||||||||||||||||| Sbjct: 95933 gatgaggacaaggaagaaag 95952 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gatgaggacaaggaagaaag 499 |||||||||||||||||||| Sbjct: 81380 gatgaggacaaggaagaaag 81399
>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two novel genes, the gene for a novel zinc finger protein (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A) pseudogene and the 3' end of a novel gene, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 94113 agtgcaaagactgctccttt 94132
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence Length = 228883 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 aaggaagaaagcaagcagga 508 |||||||||||||||||||| Sbjct: 193056 aaggaagaaagcaagcagga 193037
>emb|AL049712.12|HSDJ686C3 Human DNA sequence from clone RP4-686C3 on chromosome 20 Contains the IDH3B gene for isocitrate dehydrogenase 3 (NAD+) beta, the NOL5A gene for nucleolar protein 5A (56kDa with KKE/D repeat), the TMC2 gene for transmembrane cochlear expressed protein 2, a novel gene, the RNU56 gene for small nuclear RNA U56, the RNU57 gene for small nuclear RNA U57, the 5' end of one variant of the ZNF343 gene for zinc finger protein 343 and three CpG islands, complete sequence Length = 159272 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 aaagcagcagctaggtgaca 552 |||||||||||||||||||| Sbjct: 11346 aaagcagcagctaggtgaca 11327
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcttggagaagctgcttcag 356 |||||||||||||||||||| Sbjct: 25929 tcttggagaagctgcttcag 25948
>emb|CR859917.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0614 (from clone DKFZp469D0614) Length = 4496 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 1412 gaggatgaggacaaggaaga 1431
>gb|AC158578.5| Mus musculus chromosome 1, clone RP24-370C23, complete sequence Length = 165463 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 163500 gatgaggatgaggacaagga 163519
>gb|AC080038.5| Homo sapiens chromosome 17, clone CTD-3035K23, complete sequence Length = 219122 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 aggaagaaagcaagcaggaa 509 |||||||||||||||||||| Sbjct: 105504 aggaagaaagcaagcaggaa 105485
>emb|BX648965.1|HSM809116 Homo sapiens mRNA; cDNA DKFZp686L2367 (from clone DKFZp686L2367) Length = 8310 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 6951 agtgcaaagactgctccttt 6970
>emb|CR749850.1| Homo sapiens mRNA; cDNA DKFZp686B2325 (from clone DKFZp686B2325) Length = 7801 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 6353 agtgcaaagactgctccttt 6372
>gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aaagcaagcaggaatacact 515 |||||||||||||||||||| Sbjct: 46195 aaagcaagcaggaatacact 46176
>dbj|AK131238.1| Homo sapiens cDNA FLJ16151 fis, clone BRAMY2045471, weakly similar to Homo sapiens CGI-89 protein mRNA Length = 3070 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 187 gatgaggatgaggacaagga 206
>dbj|AK027866.1| Homo sapiens cDNA FLJ14960 fis, clone PLACE4000192, weakly similar to ZINC FINGER PROTEIN 142 Length = 4828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 3491 agtgcaaagactgctccttt 3510
>dbj|AK023130.1| Homo sapiens cDNA FLJ13068 fis, clone NT2RP3001739, weakly similar to HYPOTHETICAL 72.5 KD PROTEIN C2F7.10 IN CHROMOSOME I Length = 3710 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 645 gaggatgaggacaaggaaga 664
>dbj|AK001905.1| Homo sapiens cDNA FLJ11043 fis, clone PLACE1004437, highly similar to Human NAD+-specific isocitrate dehydrogenase beta subunit precursor, mRNA Length = 1622 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 aaagcagcagctaggtgaca 552 |||||||||||||||||||| Sbjct: 629 aaagcagcagctaggtgaca 610
>gb|AC016821.9| Homo sapiens chromosome 10 clone RP11-404C6, complete sequence Length = 194243 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aggatgaggacaaggaagaa 497 |||||||||||||||||||| Sbjct: 131140 aggatgaggacaaggaagaa 131121
>gb|AF040643.1| Caenorhabditis elegans cosmid F14D2, complete sequence Length = 35188 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ttggcaaatttatgaaactt 158 |||||||||||||||||||| Sbjct: 14156 ttggcaaatttatgaaactt 14137
>gb|DQ185878.1| Phaseolus vulgaris clone PvBR10 microsatellite sequence Length = 342 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aaggatgagaaggaggacta 118 |||||||||||||||||||| Sbjct: 150 aaggatgagaaggaggacta 131
>emb|CR407459.1| Gallus gallus finished cDNA, clone ChEST139g23 Length = 1372 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 gggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||| |||||||| Sbjct: 567 gggcgatgaggatgaggaggaggaagaa 594
>dbj|AK029380.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833417O18 product:TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55 kDa, full insert sequence Length = 1725 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 616 acaaagagaaaaagtttgtt 635
>emb|CR386121.1| Gallus gallus finished cDNA, clone ChEST466f17 Length = 768 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 gggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||| |||||||| Sbjct: 673 gggcgatgaggatgaggaggaggaagaa 700
>gb|U11059.1|ZMU11059 Zea mays A188 retrotransposon gag gene, complete cds Length = 7313 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ttggagaagctgcttcagaa 358 |||||||||||||||||||| Sbjct: 1578 ttggagaagctgcttcagaa 1597
>gb|AC073938.11|AC073938 Mus musculus 18 BAC RP23-292H1 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 205547 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 43139 acaaagagaaaaagtttgtt 43158
>gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q11, complete sequence Length = 174840 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 18465 gatgaggatgaggacaagga 18484
>gb|AC000097.1| Homo sapiens Chromosome 22q11.2 PAC Clone p201m18 In DGCR Region, complete sequence Length = 162269 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 88283 gatgaggatgaggacaagga 88302
>gb|AC006547.9| Homo sapiens chromosome 22 clone p158l19 map 22q11, complete sequence Length = 179269 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 100511 gatgaggatgaggacaagga 100530
>gb|BC026967.1| Homo sapiens zinc finger, DHHC-type containing 5, mRNA (cDNA clone MGC:34718 IMAGE:3913317), complete cds Length = 2497 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 231 gaggatgaggacaaggaaga 250
>gb|BC053544.1| Homo sapiens zinc finger, DHHC-type containing 8, mRNA (cDNA clone MGC:61585 IMAGE:5730191), complete cds Length = 3520 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 336 gatgaggatgaggacaagga 355
>dbj|AK076362.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732467L03 product:TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55 kDa, full insert sequence Length = 2854 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 617 acaaagagaaaaagtttgtt 636
>dbj|AK075700.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190026P13 product:TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55 kDa, full insert sequence Length = 1721 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 602 acaaagagaaaaagtttgtt 621
>gb|AC159326.9| Mus musculus 10 BAC RP23-451H6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230689 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 aaggaagaaagcaagcagga 508 |||||||||||||||||||| Sbjct: 97577 aaggaagaaagcaagcagga 97558
>emb|BX929554.2| Gallus gallus finished cDNA, clone ChEST745d24 Length = 1378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 gggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||| |||||||| Sbjct: 573 gggcgatgaggatgaggaggaggaagaa 600
>gb|AC020971.3|AC020971 Mus musculus chromosome 18 clone RP23-56B11, complete sequence Length = 236350 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 73665 acaaagagaaaaagtttgtt 73646
>emb|BX821021.1|CNS0AA0B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH92ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2447 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gaggactacaagaaattttgggagagctttgg 142 ||||| ||||||||||| ||||||| |||||| Sbjct: 1377 gaggattacaagaaattctgggagaactttgg 1408
>gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome 16, complete sequence Length = 192492 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ttttattcctccaaaaatga 229 |||||||||||||||||||| Sbjct: 38435 ttttattcctccaaaaatga 38416
>emb|BX936074.1| Gallus gallus finished cDNA, clone ChEST485k18 Length = 1280 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 470 gggcgatgaggatgaggacaaggaagaa 497 |||||||||||||||||| |||||||| Sbjct: 556 gggcgatgaggatgaggaggaggaagaa 583
>gb|AC122218.4| Mus musculus BAC clone RP23-118J7 from chromosome 16, complete sequence Length = 196599 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 agaaaaagtttgttgatatcagca 453 ||||||||||||||||||| |||| Sbjct: 78949 agaaaaagtttgttgatataagca 78972
>dbj|AK181388.1| Mus musculus cDNA, clone:Y0G0117P03, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032992, based on BLAT search Length = 419 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 77 gatgaggatgaggacaagga 96
>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete sequence Length = 194418 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agagaaaaagtttgttgata 447 |||||||||||||||||||| Sbjct: 170482 agagaaaaagtttgttgata 170501
>emb|BX647707.1|HSM807853 Homo sapiens mRNA; cDNA DKFZp686A1286 (from clone DKFZp686A1286) Length = 3619 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 349 gaggatgaggacaaggaaga 368
>gb|AY510702.1| Haemonchus contortus calreticulin-like protein mRNA, partial cds Length = 1133 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 1084 gaggatgaggacaaggaaga 1103
>gb|AC151533.3| Mus musculus BAC clone RP24-92D11 from 14, complete sequence Length = 230285 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gacaaggatgagaaggagga 115 |||||||||||||||||||| Sbjct: 136807 gacaaggatgagaaggagga 136826
>gb|AF144562.1|AF144562 Mus musculus TFIID subunit TAFII55 mRNA, complete cds Length = 1762 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 acaaagagaaaaagtttgtt 443 |||||||||||||||||||| Sbjct: 601 acaaagagaaaaagtttgtt 620
>emb|CR456357.1| Homo sapiens Em:AC006547.5 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.Em:AC006547.5) Length = 2357 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 93 gatgaggatgaggacaagga 112
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 43725 gatgaggatgaggacaagga 43706
>ref|NM_013373.2| Homo sapiens zinc finger, DHHC-type containing 8 (ZDHHC8), mRNA Length = 3520 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 335 gatgaggatgaggacaagga 354
>ref|NM_015457.2| Homo sapiens zinc finger, DHHC-type containing 5 (ZDHHC5), mRNA Length = 4582 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 1488 gaggatgaggacaaggaaga 1507
>ref|NM_001038657.1| Pan troglodytes zinc finger, DHHC-type containing 5 (ZDHHC5), mRNA Length = 4029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 935 gaggatgaggacaaggaaga 954
>ref|NM_001038656.1| Pan troglodytes zinc finger, DHHC-type containing 8 (ZDHHC8), mRNA Length = 3460 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 336 gatgaggatgaggacaagga 355
>gb|AC134917.5| Mus musculus BAC clone RP23-64B3 from chromosome 12, complete sequence Length = 225046 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 198717 gaggatgaggacaaggaaga 198736
>gb|AY894890.1| Homo sapiens membrane-associated DHHC8 zinc finger protein mRNA, complete cds Length = 5030 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 336 gatgaggatgaggacaagga 355
>gb|AY894889.1| Homo sapiens membrane-associated DHHC5 zinc finger protein mRNA, complete cds Length = 4686 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 1594 gaggatgaggacaaggaaga 1613
>gb|AY871200.1| Pan troglodytes membrane-associated DHHC8 zinc finger protein mRNA, complete cds Length = 3460 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gatgaggatgaggacaagga 493 |||||||||||||||||||| Sbjct: 336 gatgaggatgaggacaagga 355
>gb|AY871199.1| Pan troglodytes membrane-associated DHHC5 zinc finger protein mRNA, complete cds Length = 4029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 935 gaggatgaggacaaggaaga 954
>gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromosome unknown, complete sequence Length = 228201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 gaagaaagcaagcaggaata 511 |||||||||||||||||||| Sbjct: 75794 gaagaaagcaagcaggaata 75813
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 69848 gaggatgaggacaaggaaga 69867 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 46607 gaggatgaggacaaggaaga 46626
>gb|AC130829.4| Mus musculus BAC clone RP23-451I11 from 12, complete sequence Length = 189692 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 77539 gaggatgaggacaaggaaga 77520
>emb|CT025668.10| Mouse DNA sequence from clone RP24-370M11 on chromosome 17, complete sequence Length = 230212 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tgctgacaaggatgagaaggagga 115 |||||||||||||||||| ||||| Sbjct: 190975 tgctgacaaggatgagaaagagga 190998
>gb|BC036884.1| Homo sapiens zinc finger protein 462, mRNA (cDNA clone IMAGE:5403937), complete cds Length = 3320 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 1949 agtgcaaagactgctccttt 1968
>gb|AC166358.5| Mus musculus BAC clone RP23-338N2 from chromosome 12, complete sequence Length = 226310 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 54844 gaggatgaggacaaggaaga 54863
>emb|AL359561.1|HSM802659 Homo sapiens mRNA; cDNA DKFZp762N2316 (from clone DKFZp762N2316) Length = 1249 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 367 agtgcaaagactgctccttt 386
>dbj|AB051535.1| Homo sapiens mRNA for KIAA1748 protein, partial cds Length = 4545 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 1480 gaggatgaggacaaggaaga 1499
>dbj|AB058706.2| Homo sapiens mRNA for KIAA1803 protein, partial cds Length = 4691 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 agtgcaaagactgctccttt 337 |||||||||||||||||||| Sbjct: 3380 agtgcaaagactgctccttt 3399
>dbj|AP000662.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-33F16, complete sequence Length = 117711 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaggatgaggacaaggaaga 496 |||||||||||||||||||| Sbjct: 83992 gaggatgaggacaaggaaga 84011 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,074,138 Number of Sequences: 3902068 Number of extensions: 6074138 Number of successful extensions: 129702 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 129282 Number of HSP's gapped (non-prelim): 404 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)