| Clone Name | bags20e03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042P15, full insert sequence Length = 1515 Score = 579 bits (292), Expect = e-162 Identities = 527/604 (87%), Gaps = 1/604 (0%) Strand = Plus / Plus Query: 3 atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62 |||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||| Sbjct: 576 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 634 Query: 63 agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 635 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 694 Query: 123 catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182 |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || | Sbjct: 695 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 754 Query: 183 ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242 | |||||||||||| | || || |||||||| || |||||||| || || || || | | Sbjct: 755 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 814 Query: 243 tgacatttaataaggttgatgtagccaagcacgagtttgctcttgagtggatgcaagact 302 |||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| Sbjct: 815 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgagtggatggaagact 874 Query: 303 ttgaagcatttcagacagctttggattctgactcatcgtactcatcttcatttacccgga 362 |||| || |||||||| || ||||||||||||||||| ||||| ||| |||||||||| | Sbjct: 875 ttgaggcgtttcagaccgccttggattctgactcatcatactcctctacatttacccgaa 934 Query: 363 gtctctctcttgtgctggacgaattctacaataacctacgctctgttggagtatcagcgg 422 | ||||||||||| ||||| || || ||||| || || || |||||||||||||| || | Sbjct: 935 gcctctctcttgtcctggatgagttttacaaaaatctgcggtctgttggagtatctgccg 994 Query: 423 tatctggcactggagttgatgcattttttgaagctatagaagcaagcgctaatgaataca 482 |||||||| ||||||| || |||||||||||||||| |||||||| || || ||||||| Sbjct: 995 tatctggcgctggagtcaattcattttttgaagctattgaagcaagtgccaaagaataca 1054 Query: 483 tggagacttacagggctgatcttgacaagcggattgctgaaaaggagagactagaagctg 542 |||||| |||||||||||||||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1055 tggagaattacagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctg 1114 Query: 543 agcgtaggaatgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaa 602 |||||||||| |||||||||||||| ||| ||||| ||||| || || |||||||| | Sbjct: 1115 agcgtaggaaggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacaga 1174 Query: 603 ctgt 606 |||| Sbjct: 1175 ctgt 1178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 299 bits (151), Expect = 6e-78 Identities = 254/287 (88%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 3 atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62 |||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||| Sbjct: 11146461 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 11146519 Query: 63 agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 11146520 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 11146579 Query: 123 catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182 |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || | Sbjct: 11146580 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 11146639 Query: 183 ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242 | |||||||||||| | || || |||||||| || |||||||| || || || || | | Sbjct: 11146640 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 11146699 Query: 243 tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289 |||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 11146700 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 11146746 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 288 agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347 |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| | Sbjct: 11146986 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 11147045 Query: 348 cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407 || |||||||||| || ||||||||||| ||||| || || ||||| || || || |||| Sbjct: 11147046 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 11147105 Query: 408 ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467 |||||||||| || ||||||||| ||||||| || |||||||||||||||| ||||||| Sbjct: 11147106 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 11147165 Query: 468 gcgctaatgaatacatggagacttacagg 496 | || || ||||||||||||| ||||||| Sbjct: 11147166 gtgccaaagaatacatggagaattacagg 11147194 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 493 cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552 ||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||| Sbjct: 11147282 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 11147341 Query: 553 tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606 |||||||||||||| ||| ||||| ||||| || || |||||||| ||||| Sbjct: 11147342 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 11147395
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 299 bits (151), Expect = 6e-78 Identities = 254/287 (88%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 3 atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62 |||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||| Sbjct: 59818 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 59876 Query: 63 agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 59877 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 59936 Query: 123 catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182 |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || | Sbjct: 59937 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 59996 Query: 183 ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242 | |||||||||||| | || || |||||||| || |||||||| || || || || | | Sbjct: 59997 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 60056 Query: 243 tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289 |||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 60057 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 60103 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 288 agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347 |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| | Sbjct: 60343 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 60402 Query: 348 cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407 || |||||||||| || ||||||||||| ||||| || || ||||| || || || |||| Sbjct: 60403 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 60462 Query: 408 ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467 |||||||||| || ||||||||| ||||||| || |||||||||||||||| ||||||| Sbjct: 60463 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 60522 Query: 468 gcgctaatgaatacatggagacttacagg 496 | || || ||||||||||||| ||||||| Sbjct: 60523 gtgccaaagaatacatggagaattacagg 60551 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 493 cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552 ||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||| Sbjct: 60639 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 60698 Query: 553 tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606 |||||||||||||| ||| ||||| ||||| || || |||||||| ||||| Sbjct: 60699 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 60752
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 299 bits (151), Expect = 6e-78 Identities = 254/287 (88%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 3 atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62 |||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||| Sbjct: 11143224 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 11143282 Query: 63 agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 11143283 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 11143342 Query: 123 catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182 |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || | Sbjct: 11143343 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 11143402 Query: 183 ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242 | |||||||||||| | || || |||||||| || |||||||| || || || || | | Sbjct: 11143403 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 11143462 Query: 243 tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289 |||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 11143463 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 11143509 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 288 agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347 |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| | Sbjct: 11143749 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 11143808 Query: 348 cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407 || |||||||||| || ||||||||||| ||||| || || ||||| || || || |||| Sbjct: 11143809 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 11143868 Query: 408 ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467 |||||||||| || ||||||||| ||||||| || |||||||||||||||| ||||||| Sbjct: 11143869 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 11143928 Query: 468 gcgctaatgaatacatggagacttacagg 496 | || || ||||||||||||| ||||||| Sbjct: 11143929 gtgccaaagaatacatggagaattacagg 11143957 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 493 cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552 ||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||| Sbjct: 11144045 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 11144104 Query: 553 tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606 |||||||||||||| ||| ||||| ||||| || || |||||||| ||||| Sbjct: 11144105 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 11144158
>gb|BT019163.1| Zea mays clone Contig828.F mRNA sequence Length = 805 Score = 268 bits (135), Expect = 2e-68 Identities = 316/375 (84%), Gaps = 1/375 (0%) Strand = Plus / Plus Query: 233 cctctggtgctgacatttaataaggttgatgtagccaagcacgagtttgctcttgagtgg 292 ||||| || |||||||| || ||||||||||| ||||||| |||||||| |||| ||| Sbjct: 50 cctctagtcctgacattcaacaaggttgatgttcccaagcatgagtttgccattgaatgg 109 Query: 293 atgcaagactttgaag-catttcagacagctttggattctgactcatcgtactcatcttc 351 |||||||||||||| | |||||||||||||| |||| |||||| ||| ||||| || | Sbjct: 110 atgcaagactttgagggcatttcagacagctgtggaatctgacaaatcatactccgctac 169 Query: 352 atttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctgttgg 411 || |||||| || |||||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 170 atatacccgaagcctctctctggttcttgacgaattctacaataatttgcgctctgttgg 229 Query: 412 agtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaagcgc 471 |||||| ||| | ||||| ||||||| || |||||||||||||||||||||| ||||| Sbjct: 230 agtatctgcgatttctggttctggagtcaatacattttttgaagctatagaagccagcgc 289 Query: 472 taatgaatacatggagacttacagggctgatcttgacaagcggattgctgaaaaggagag 531 || ||||||||||| || ||||||||||||||||||||| |||||||||||||||| || Sbjct: 290 caaggaatacatggaaacctacagggctgatcttgacaagaggattgctgaaaaggaaag 349 Query: 532 actagaagctgagcgtaggaatgagaacatggaaagattgaggagagatatggagaagtc 591 | | || | ||||| ||||| ||||| ||||||| |||| || ||||||| ||| || Sbjct: 350 attggaggaagagcgcaggaaggagaatatggaaaaattgcagaaagatatgatgaaatc 409 Query: 592 caaaggacaaactgt 606 ||||||||||||||| Sbjct: 410 caaaggacaaactgt 424
>emb|BX826859.1|CNS0A36E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 115 bits (58), Expect = 2e-22 Identities = 191/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||||||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 489 tctgttattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 547 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 548 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 607 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 608 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 667 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 668 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 721 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 945 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 993
>ref|NM_202857.1| Arabidopsis thaliana ATP binding AT4G21800 transcript variant AT4G21800.2 mRNA, complete cds Length = 1759 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 488 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 546 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 547 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 606 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 607 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 666 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 667 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 720 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 944 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 992
>ref|NM_118300.2| Arabidopsis thaliana ATP binding AT4G21800 transcript variant AT4G21800.1 mRNA, complete cds Length = 1740 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 469 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 527 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 528 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 587 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 588 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 647 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 648 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 701 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 925 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 973
>gb|AY143879.1| Arabidopsis thaliana At4g21800/F17L22_260 mRNA, complete cds Length = 1140 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 385 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 443 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 444 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 503 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 504 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 563 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 564 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 617 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 841 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 889
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 2008 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 2066 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 2067 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 2126 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 2127 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 2186 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 2187 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 2240
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55 Length = 194916 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 191924 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 191982 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 191983 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 192042 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 192043 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 192102 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 192103 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 192156
>emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, BAC clone F17L22 (ESSAII project) Length = 107702 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 105866 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 105924 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 105925 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 105984 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 105985 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 106044 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 106045 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 106098
>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII project) Length = 83029 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 521 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 579 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 580 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 639 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 640 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 699 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 700 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 753
>gb|AF419563.1|AF419563 Arabidopsis thaliana AT4g21800/F17L22_260 mRNA, complete cds Length = 1372 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 469 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 527 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 528 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 587 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 588 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 647 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 648 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 701 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 925 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 973
>gb|AY088472.1| Arabidopsis thaliana clone 6952 mRNA, complete sequence Length = 1372 Score = 107 bits (54), Expect = 4e-20 Identities = 190/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || || Sbjct: 467 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 525 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || ||||| Sbjct: 526 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 585 Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183 || || || ||||| | ||||||||||| || ||| | || ||| ||| | || || Sbjct: 586 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 645 Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237 ||||||||||||| | ||||| || ||||| |||||||||||||| |||||||| Sbjct: 646 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 699 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 923 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 971
>emb|BX827058.1|CNS0A39E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 103 bits (52), Expect = 7e-19 Identities = 176/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 22 gcagaccagctggnattatgtgctggtggacaccccagggcagattgaaatctttacttg 81 ||||||||||| | ||||||| || |||||||| || || |||||||| |||||||| || Sbjct: 476 gcagaccagcttg-attatgttcttgtggacactcctggtcagattgagatctttacatg 534 Query: 82 gtcggcttcaggagctatcataactgaagcttttgcatcaacatttccaacagttgttgc 141 ||| ||||| || ||||| || ||||||||||| || ||||| || || || ||||| | Sbjct: 535 gtctgcttctggggctataatcactgaagctttcgcttcaaccttccccactgttgtgac 594 Query: 142 atatgtggttgacacccccaggtcgacaaaccctgtgacctttatgagcaacatgatgta 201 ||||||||||| || ||| | || ||| ||| |||| ||||||||| ||||| | || Sbjct: 595 ctatgtggttgatactccccgttcctcaagcccaatgacttttatgagcgacatgcttta 654 Query: 202 cgcgtgcagtatcctctacaagactcgtttgcctct 237 ||| || ||||| |||||||||||||| |||||||| Sbjct: 655 cgcttgtagtattctctacaagactcggttgcctct 690 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatctt 505 |||||||| ||| | ||||||||||| ||| ||| |||||||||| Sbjct: 914 gaagcaagtgctgaggaatacatggaaactcacaaggctgatctt 958
>emb|BX826827.1|CNS0A35N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 852 Score = 103 bits (52), Expect = 7e-19 Identities = 176/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 22 gcagaccagctggnattatgtgctggtggacaccccagggcagattgaaatctttacttg 81 ||||||||||| | ||||||| || |||||||| || || |||||||| |||||||| || Sbjct: 17 gcagaccagcttg-attatgttcttgtggacactcctggtcagattgagatctttacatg 75 Query: 82 gtcggcttcaggagctatcataactgaagcttttgcatcaacatttccaacagttgttgc 141 ||| ||||| || ||||| || ||||||||||| || ||||| || || || ||||| | Sbjct: 76 gtctgcttctggggctataatcactgaagctttcgcttcaaccttccccactgttgtcac 135 Query: 142 atatgtggttgacacccccaggtcgacaaaccctgtgacctttatgagcaacatgatgta 201 ||||||||||| || ||| | || ||| ||| | || ||||||||||||||| | || Sbjct: 136 ctatgtggttgatactccccgttcctcaagcccaatcacttttatgagcaacatgcttta 195 Query: 202 cgcgtgcagtatcctctacaagactcgtttgcctct 237 ||| || ||||| |||||||||||||| |||||||| Sbjct: 196 cgcttgtagtattctctacaagactcggttgcctct 231 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509 |||||||| ||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 455 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 503
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence Length = 127731 Score = 67.9 bits (34), Expect = 4e-08 Identities = 122/150 (81%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 4 tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63 ||||||||||| || |||||||| || |||| | ||||| || ||||| || || || || Sbjct: 103009 tctgttattgagaaacgagcagatcaactgg-actatgttcttgtggatactcctggtca 102951 Query: 64 gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123 |||||| || || || ||||| ||||| || |||||||| || ||||||||||| || || Sbjct: 102950 gattgagatattcacatggtctgcttccggtgctatcatcacagaagcttttgcctccac 102891 Query: 124 atttccaacagttgttgcatatgtggttga 153 |||||| || || ||||| ||||| ||||| Sbjct: 102890 atttcccactgtagttgcctatgtagttga 102861 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 182 tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 ||||||||||||||| | || || || ||||||||||| ||||| Sbjct: 102832 tttatgagcaacatgctctatgcttgtagtatcctctataagac 102789
>ref|XM_323859.1| Neurospora crassa OR74A hypothetical protein (NCU04507.1) partial mRNA Length = 1200 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 178 gacctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 |||||| |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 507 gaccttcatgagcaacatgctgtacgcctgcagtatcctttacaagac 554
>ref|XM_951825.1| Neurospora crassa OR74A hypothetical protein (NCU04507.1) partial mRNA Length = 1200 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 178 gacctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 |||||| |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 507 gaccttcatgagcaacatgctgtacgcctgcagtatcctttacaagac 554
>ref|XM_369143.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00101.4) partial mRNA Length = 1227 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 179 acctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 |||||||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 520 acctttatgagcaacatgctctacgcctgcagtatcctgtacaagac 566
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 47 gtggacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcataac 105 |||||||||||||| ||||| |||||||| || ||||| || || || ||||||||||| Sbjct: 1317399 gtggacaccccaggacagatcgaaatcttcacctggtccgcgtctggtgctatcataac 1317457
>ref|XM_570415.1| Cryptococcus neoformans var. neoformans JEC21 aerobic respiration-related protein (CND04790) partial mRNA Length = 1702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 47 gtggacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcataac 105 |||||||||||||| ||||| |||||||| || ||||| || || || ||||||||||| Sbjct: 413 gtggacaccccaggacagatcgaaatcttcacctggtccgcgtctggtgctatcataac 471
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 179 acctttatgagcaacatgatgtacgcgtgcagtatcctctacaagact 226 ||||||||||| || ||| | ||||| |||||||| |||||||||||| Sbjct: 2787659 acctttatgagtaatatgctttacgcctgcagtattctctacaagact 2787706
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 182 tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 ||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1207457 tttatgagcaacatgctgtacgcgtgctccatcctgtacaagac 1207414
>ref|NM_211330.1| Eremothecium gossypii AFR428Cp (AFR428C), mRNA Length = 1152 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 182 tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225 ||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 442 tttatgagcaacatgctgtacgcgtgctccatcctgtacaagac 485
>gb|DQ425087.1| HIV-1 clone 27.10.5 from United Kingdom envelope glycoprotein (env) gene, partial cds Length = 1389 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ttacagggctgatcttgacaag 511 |||||||||||||||||||||| Sbjct: 1208 ttacagggctgatcttgacaag 1229
>ref|XM_793047.1| PREDICTED: Strongylocentrotus purpuratus similar to XPA binding protein 1 (LOC593577), partial mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 50 gacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcat 102 ||||| ||||||||||| ||| |||| || ||||| || || ||||||||||| Sbjct: 545 gacactccagggcagatagaagtcttcacatggtcagcatctggagctatcat 597
>gb|AC139527.19| Botryllus schlosseri clone subsf-532h24, complete sequence Length = 35618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 gctgatcttgacaagcggatt 517 ||||||||||||||||||||| Sbjct: 10783 gctgatcttgacaagcggatt 10763
>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence Length = 216294 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 583 ggagaagtccaaaggacaaac 603 ||||||||||||||||||||| Sbjct: 110129 ggagaagtccaaaggacaaac 110109
>emb|AJ312094.1|LES312094 Lycopersicon esculentum mRNA for SPY protein (SPINDLY-related protein) Length = 3246 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 ctgactcatcgtactcatcttcatt 354 |||||||| |||||||||||||||| Sbjct: 2602 ctgactcaacgtactcatcttcatt 2578
>emb|AJ312093.1|LES312093 Lycopersicon esculentum spy gene (SPINDLY-related gene), exons 1-18 Length = 18005 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 330 ctgactcatcgtactcatcttcatt 354 |||||||| |||||||||||||||| Sbjct: 16360 ctgactcaacgtactcatcttcatt 16336
>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete sequence Length = 202887 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 cgtaggaatgagaacatggaa 565 ||||||||||||||||||||| Sbjct: 13539 cgtaggaatgagaacatggaa 13559
>gb|BC023108.1| Mus musculus leukocyte receptor cluster (LRC) member 1, mRNA (cDNA clone MGC:28381 IMAGE:4021762), complete cds Length = 2288 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 2055 actttgaagcatttcagaca 2036
>gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, complete sequence Length = 158678 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 gaagtccaaaggacaaactg 605 |||||||||||||||||||| Sbjct: 150779 gaagtccaaaggacaaactg 150760
>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research Institute) complete sequence Length = 243051 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 233684 actttgaagcatttcagaca 233665
>ref|XM_746555.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g11820) partial mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 179 acctttatgagcaacatgatgtacgcgtgcagtatcctctacaa 222 ||||| |||||||||||| | ||||| |||||||| || ||||| Sbjct: 478 accttcatgagcaacatgctttacgcttgcagtattctgtacaa 521
>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence Length = 220895 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 gaagtccaaaggacaaactg 605 |||||||||||||||||||| Sbjct: 172719 gaagtccaaaggacaaactg 172738
>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence Length = 214654 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 attgaggagagatatggaga 587 |||||||||||||||||||| Sbjct: 156842 attgaggagagatatggaga 156861
>gb|AE004429.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 86 of 93 of the complete chromosome Length = 11868 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 caagcacgagtttgctcttg 287 |||||||||||||||||||| Sbjct: 4878 caagcacgagtttgctcttg 4897
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 146439 actttgaagcatttcagaca 146458
>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part of the NTNG1 gene for netrin G1, complete sequence Length = 122032 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 agactttgaagcatttcaga 317 |||||||||||||||||||| Sbjct: 81388 agactttgaagcatttcaga 81407
>emb|BX005720.1|CNS08CKS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA1BD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 681 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 agtggatgcaagactttgaagcatttca 315 ||||||||||||| |||||||| ||||| Sbjct: 547 agtggatgcaagattttgaagcgtttca 520
>emb|BX005719.1|CNS08CKR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA1BD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 521 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 agtggatgcaagactttgaagcatttca 315 ||||||||||||| |||||||| ||||| Sbjct: 393 agtggatgcaagattttgaagcgtttca 420
>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence Length = 136680 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 77199 actttgaagcatttcagaca 77218
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gtctctctcttgtgctggac 382 |||||||||||||||||||| Sbjct: 164122 gtctctctcttgtgctggac 164141
>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence Length = 133452 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ttgcctctggtgctgacatt 249 |||||||||||||||||||| Sbjct: 66205 ttgcctctggtgctgacatt 66224
>ref|NM_027203.2| Mus musculus leukocyte receptor cluster (LRC) member 1 (Leng1), mRNA Length = 2288 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 2055 actttgaagcatttcagaca 2036
>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence Length = 199695 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 gaacatggaaagattgagga 575 |||||||||||||||||||| Sbjct: 43664 gaacatggaaagattgagga 43683
>dbj|AK037634.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130030P06 product:similar to LENG1 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 1871 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 1701 actttgaagcatttcagaca 1682
>gb|AC003037.1|AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome Systems Human BAC library) complete sequence Length = 213863 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 actcatcgtactcatcttca 352 |||||||||||||||||||| Sbjct: 36776 actcatcgtactcatcttca 36795
>gb|AC078994.3|AC078994 Homo sapiens chromosome 2 clone RP11-16B4 containing NRXN1 gene, partial cds, complete sequence Length = 179616 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 ggagagactagaagctgagc 545 |||||||||||||||||||| Sbjct: 34863 ggagagactagaagctgagc 34882
>ref|XM_320117.2| Anopheles gambiae str. PEST ENSANGP00000001801 (ENSANGG00000001516), partial mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 288 agtggatgcaagactttgaagcatttca 315 ||||||||||||| |||||||| ||||| Sbjct: 395 agtggatgcaagattttgaagcgtttca 422
>emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 in linkage group 22, complete sequence Length = 149478 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tatcataactgaagcttttg 116 |||||||||||||||||||| Sbjct: 22562 tatcataactgaagcttttg 22543
>emb|BX571946.9| Zebrafish DNA sequence from clone DKEY-232H18 in linkage group 22, complete sequence Length = 179796 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tatcataactgaagcttttg 116 |||||||||||||||||||| Sbjct: 77581 tatcataactgaagcttttg 77600
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gtctctctcttgtgctggac 382 |||||||||||||||||||| Sbjct: 36209 gtctctctcttgtgctggac 36228
>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence Length = 200031 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgaagcatttcagaca 319 |||||||||||||||||||| Sbjct: 73600 actttgaagcatttcagaca 73619
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagattgaaatctttacttg 81 |||||||||||||||||||| Sbjct: 1087497 cagattgaaatctttacttg 1087478
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taactgaagcttttgcatca 121 |||||||||||||||||||| Sbjct: 32766 taactgaagcttttgcatca 32747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,237,598 Number of Sequences: 3902068 Number of extensions: 5237598 Number of successful extensions: 101201 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100950 Number of HSP's gapped (non-prelim): 239 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)