ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 579 e-162
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 299 6e-78
3gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 299 6e-78
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 299 6e-78
5gb|BT019163.1| Zea mays clone Contig828.F mRNA sequence 268 2e-68
6emb|BX826859.1|CNS0A36E Arabidopsis thaliana Full-length cDNA Co... 115 2e-22
7ref|NM_202857.1| Arabidopsis thaliana ATP binding AT4G21800 tran... 107 4e-20
8ref|NM_118300.2| Arabidopsis thaliana ATP binding AT4G21800 tran... 107 4e-20
9gb|AY143879.1| Arabidopsis thaliana At4g21800/F17L22_260 mRNA, c... 107 4e-20
10emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, ... 107 4e-20
11emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 107 4e-20
12emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, B... 107 4e-20
13emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC... 107 4e-20
14gb|AF419563.1|AF419563 Arabidopsis thaliana AT4g21800/F17L22_260... 107 4e-20
15gb|AY088472.1| Arabidopsis thaliana clone 6952 mRNA, complete se... 107 4e-20
16emb|BX827058.1|CNS0A39E Arabidopsis thaliana Full-length cDNA Co... 103 7e-19
17emb|BX826827.1|CNS0A35N Arabidopsis thaliana Full-length cDNA Co... 103 7e-19
18gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete s... 68 4e-08
19ref|XM_323859.1| Neurospora crassa OR74A hypothetical protein (N... 64 6e-07
20ref|XM_951825.1| Neurospora crassa OR74A hypothetical protein (N... 64 6e-07
21ref|XM_369143.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 62 2e-06
22gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 54 5e-04
23ref|XM_570415.1| Cryptococcus neoformans var. neoformans JEC21 a... 54 5e-04
24dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 48 0.034
25gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 48 0.034
26ref|NM_211330.1| Eremothecium gossypii AFR428Cp (AFR428C), mRNA 48 0.034
27gb|DQ425087.1| HIV-1 clone 27.10.5 from United Kingdom envelope ... 44 0.53
28ref|XM_793047.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
29gb|AC139527.19| Botryllus schlosseri clone subsf-532h24, complet... 42 2.1
30gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosom... 42 2.1
31emb|AJ312094.1|LES312094 Lycopersicon esculentum mRNA for SPY pr... 42 2.1
32emb|AJ312093.1|LES312093 Lycopersicon esculentum spy gene (SPIND... 42 2.1
33emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chr... 42 2.1
34gb|BC023108.1| Mus musculus leukocyte receptor cluster (LRC) mem... 40 8.2
35gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, comp... 40 8.2
36gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hos... 40 8.2
37ref|XM_746555.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.2
38gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome... 40 8.2
39gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete... 40 8.2
40gb|AE004429.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 8.2
41gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's ... 40 8.2
42emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chro... 40 8.2
43emb|BX005720.1|CNS08CKS Single read from an extremity of a full-... 40 8.2
44emb|BX005719.1|CNS08CKR Single read from an extremity of a full-... 40 8.2
45gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, co... 40 8.2
46gb|AE014175.1| Mus musculus piebald deletion region section 3 of... 40 8.2
47gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence 40 8.2
48ref|NM_027203.2| Mus musculus leukocyte receptor cluster (LRC) m... 40 8.2
49gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome... 40 8.2
50dbj|AK037634.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.2
51gb|AC003037.1|AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome... 40 8.2
52gb|AC078994.3|AC078994 Homo sapiens chromosome 2 clone RP11-16B4... 40 8.2
53ref|XM_320117.2| Anopheles gambiae str. PEST ENSANGP00000001801 ... 40 8.2
54emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 i... 40 8.2
55emb|BX571946.9| Zebrafish DNA sequence from clone DKEY-232H18 in... 40 8.2
56gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, com... 40 8.2
57gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, com... 40 8.2
58gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.2
59gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ... 40 8.2

>dbj|AK073391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042P15, full
            insert sequence
          Length = 1515

 Score =  579 bits (292), Expect = e-162
 Identities = 527/604 (87%), Gaps = 1/604 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62
            ||||||||||||||  ||||| |||||||||| ||||||| ||||||||||| |||||||
Sbjct: 576  atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 634

                                                                        
Query: 63   agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122
            ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 635  agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 694

                                                                        
Query: 123  catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182
            |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || |
Sbjct: 695  catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 754

                                                                        
Query: 183  ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242
            | |||||||||||| | || || |||||||| || |||||||| || || ||  || | |
Sbjct: 755  tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 814

                                                                        
Query: 243  tgacatttaataaggttgatgtagccaagcacgagtttgctcttgagtggatgcaagact 302
            |||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||
Sbjct: 815  tgacatttaataaggttgatgttgccaagcatgagtttgctcttgagtggatggaagact 874

                                                                        
Query: 303  ttgaagcatttcagacagctttggattctgactcatcgtactcatcttcatttacccgga 362
            |||| || |||||||| || ||||||||||||||||| ||||| ||| |||||||||| |
Sbjct: 875  ttgaggcgtttcagaccgccttggattctgactcatcatactcctctacatttacccgaa 934

                                                                        
Query: 363  gtctctctcttgtgctggacgaattctacaataacctacgctctgttggagtatcagcgg 422
            | ||||||||||| ||||| || || ||||| || || || |||||||||||||| || |
Sbjct: 935  gcctctctcttgtcctggatgagttttacaaaaatctgcggtctgttggagtatctgccg 994

                                                                        
Query: 423  tatctggcactggagttgatgcattttttgaagctatagaagcaagcgctaatgaataca 482
            |||||||| |||||||  || |||||||||||||||| |||||||| || || |||||||
Sbjct: 995  tatctggcgctggagtcaattcattttttgaagctattgaagcaagtgccaaagaataca 1054

                                                                        
Query: 483  tggagacttacagggctgatcttgacaagcggattgctgaaaaggagagactagaagctg 542
            |||||| |||||||||||||||||||||| ||||||||||||| |||||  |||| ||||
Sbjct: 1055 tggagaattacagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctg 1114

                                                                        
Query: 543  agcgtaggaatgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaa 602
            |||||||||| |||||||||||||| |||   ||||| ||||| || || |||||||| |
Sbjct: 1115 agcgtaggaaggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacaga 1174

                
Query: 603  ctgt 606
            ||||
Sbjct: 1175 ctgt 1178



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  299 bits (151), Expect = 6e-78
 Identities = 254/287 (88%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62
                ||||||||||||||  ||||| |||||||||| ||||||| ||||||||||| |||||||
Sbjct: 11146461 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 11146519

                                                                            
Query: 63       agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122
                ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 11146520 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 11146579

                                                                            
Query: 123      catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182
                |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || |
Sbjct: 11146580 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 11146639

                                                                            
Query: 183      ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242
                | |||||||||||| | || || |||||||| || |||||||| || || ||  || | |
Sbjct: 11146640 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 11146699

                                                               
Query: 243      tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289
                |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 11146700 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 11146746



 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Plus

                                                                            
Query: 288      agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347
                |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| |
Sbjct: 11146986 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 11147045

                                                                            
Query: 348      cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407
                || |||||||||| || ||||||||||| ||||| || || ||||| || || || ||||
Sbjct: 11147046 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 11147105

                                                                            
Query: 408      ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467
                |||||||||| || ||||||||| |||||||  || |||||||||||||||| |||||||
Sbjct: 11147106 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 11147165

                                             
Query: 468      gcgctaatgaatacatggagacttacagg 496
                | || || ||||||||||||| |||||||
Sbjct: 11147166 gtgccaaagaatacatggagaattacagg 11147194



 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                            
Query: 493      cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552
                ||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 11147282 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 11147341

                                                                      
Query: 553      tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606
                 |||||||||||||| |||   ||||| ||||| || || |||||||| |||||
Sbjct: 11147342 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 11147395



to top

>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score =  299 bits (151), Expect = 6e-78
 Identities = 254/287 (88%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62
             ||||||||||||||  ||||| |||||||||| ||||||| ||||||||||| |||||||
Sbjct: 59818 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 59876

                                                                         
Query: 63    agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122
             ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 59877 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 59936

                                                                         
Query: 123   catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182
             |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || |
Sbjct: 59937 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 59996

                                                                         
Query: 183   ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242
             | |||||||||||| | || || |||||||| || |||||||| || || ||  || | |
Sbjct: 59997 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 60056

                                                            
Query: 243   tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289
             |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 60057 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 60103



 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Plus

                                                                         
Query: 288   agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347
             |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| |
Sbjct: 60343 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 60402

                                                                         
Query: 348   cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407
             || |||||||||| || ||||||||||| ||||| || || ||||| || || || ||||
Sbjct: 60403 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 60462

                                                                         
Query: 408   ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467
             |||||||||| || ||||||||| |||||||  || |||||||||||||||| |||||||
Sbjct: 60463 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 60522

                                          
Query: 468   gcgctaatgaatacatggagacttacagg 496
             | || || ||||||||||||| |||||||
Sbjct: 60523 gtgccaaagaatacatggagaattacagg 60551



 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                         
Query: 493   cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552
             ||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 60639 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 60698

                                                                   
Query: 553   tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606
              |||||||||||||| |||   ||||| ||||| || || |||||||| |||||
Sbjct: 60699 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 60752



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  299 bits (151), Expect = 6e-78
 Identities = 254/287 (88%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                            
Query: 3        atctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggc 62
                ||||||||||||||  ||||| |||||||||| ||||||| ||||||||||| |||||||
Sbjct: 11143224 atctgttattgaaagacgagccgaccagctgg-attatgtcctggtggacacgccagggc 11143282

                                                                            
Query: 63       agattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaa 122
                ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 11143283 agattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcga 11143342

                                                                            
Query: 123      catttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacct 182
                |||||||||||||||| |||||||| |||||||||||||| || || | |||||| || |
Sbjct: 11143343 catttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactt 11143402

                                                                            
Query: 183      ttatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctctggtgc 242
                | |||||||||||| | || || |||||||| || |||||||| || || ||  || | |
Sbjct: 11143403 tcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattc 11143462

                                                               
Query: 243      tgacatttaataaggttgatgtagccaagcacgagtttgctcttgag 289
                |||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 11143463 tgacatttaataaggttgatgttgccaagcatgagtttgctcttgag 11143509



 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Plus

                                                                            
Query: 288      agtggatgcaagactttgaagcatttcagacagctttggattctgactcatcgtactcat 347
                |||||||| |||||||||| || |||||||| || ||||||||||||||||| ||||| |
Sbjct: 11143749 agtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcct 11143808

                                                                            
Query: 348      cttcatttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctg 407
                || |||||||||| || ||||||||||| ||||| || || ||||| || || || ||||
Sbjct: 11143809 ctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctg 11143868

                                                                            
Query: 408      ttggagtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaa 467
                |||||||||| || ||||||||| |||||||  || |||||||||||||||| |||||||
Sbjct: 11143869 ttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaa 11143928

                                             
Query: 468      gcgctaatgaatacatggagacttacagg 496
                | || || ||||||||||||| |||||||
Sbjct: 11143929 gtgccaaagaatacatggagaattacagg 11143957



 Score =  107 bits (54), Expect = 4e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                            
Query: 493      cagggctgatcttgacaagcggattgctgaaaaggagagactagaagctgagcgtaggaa 552
                ||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||||
Sbjct: 11144045 cagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaa 11144104

                                                                      
Query: 553      tgagaacatggaaagattgaggagagatatggagaagtccaaaggacaaactgt 606
                 |||||||||||||| |||   ||||| ||||| || || |||||||| |||||
Sbjct: 11144105 ggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgt 11144158



to top

>gb|BT019163.1| Zea mays clone Contig828.F mRNA sequence
          Length = 805

 Score =  268 bits (135), Expect = 2e-68
 Identities = 316/375 (84%), Gaps = 1/375 (0%)
 Strand = Plus / Plus

                                                                       
Query: 233 cctctggtgctgacatttaataaggttgatgtagccaagcacgagtttgctcttgagtgg 292
           ||||| || |||||||| || |||||||||||  ||||||| ||||||||  |||| |||
Sbjct: 50  cctctagtcctgacattcaacaaggttgatgttcccaagcatgagtttgccattgaatgg 109

                                                                       
Query: 293 atgcaagactttgaag-catttcagacagctttggattctgactcatcgtactcatcttc 351
           |||||||||||||| | |||||||||||||| |||| ||||||  ||| |||||  || |
Sbjct: 110 atgcaagactttgagggcatttcagacagctgtggaatctgacaaatcatactccgctac 169

                                                                       
Query: 352 atttacccggagtctctctcttgtgctggacgaattctacaataacctacgctctgttgg 411
           || |||||| || |||||||| || || |||||||||||||||||  | |||||||||||
Sbjct: 170 atatacccgaagcctctctctggttcttgacgaattctacaataatttgcgctctgttgg 229

                                                                       
Query: 412 agtatcagcggtatctggcactggagttgatgcattttttgaagctatagaagcaagcgc 471
           |||||| ||| | |||||  |||||||  || |||||||||||||||||||||| |||||
Sbjct: 230 agtatctgcgatttctggttctggagtcaatacattttttgaagctatagaagccagcgc 289

                                                                       
Query: 472 taatgaatacatggagacttacagggctgatcttgacaagcggattgctgaaaaggagag 531
            || ||||||||||| || ||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 290 caaggaatacatggaaacctacagggctgatcttgacaagaggattgctgaaaaggaaag 349

                                                                       
Query: 532 actagaagctgagcgtaggaatgagaacatggaaagattgaggagagatatggagaagtc 591
           | | || |  ||||| ||||| ||||| ||||||| ||||  || |||||||  ||| ||
Sbjct: 350 attggaggaagagcgcaggaaggagaatatggaaaaattgcagaaagatatgatgaaatc 409

                          
Query: 592 caaaggacaaactgt 606
           |||||||||||||||
Sbjct: 410 caaaggacaaactgt 424



to top

>emb|BX826859.1|CNS0A36E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZF11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1370

 Score =  115 bits (58), Expect = 2e-22
 Identities = 191/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||||||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 489 tctgttattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 547

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 548 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 607

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 608 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 667

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 668 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 721



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 945 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 993



to top

>ref|NM_202857.1| Arabidopsis thaliana ATP binding AT4G21800 transcript variant
           AT4G21800.2 mRNA, complete cds
          Length = 1759

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 488 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 546

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 547 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 606

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 607 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 666

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 667 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 720



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 944 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 992



to top

>ref|NM_118300.2| Arabidopsis thaliana ATP binding AT4G21800 transcript variant
           AT4G21800.1 mRNA, complete cds
          Length = 1740

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 469 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 527

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 528 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 587

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 588 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 647

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 648 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 701



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 925 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 973



to top

>gb|AY143879.1| Arabidopsis thaliana At4g21800/F17L22_260 mRNA, complete cds
          Length = 1140

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 385 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 443

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 444 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 503

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 504 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 563

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 564 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 617



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 841 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 889



to top

>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
          Length = 196247

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
            ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 2008 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 2066

                                                                        
Query: 64   gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
            |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 2067 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 2126

                                                                        
Query: 124  atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
             || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 2127 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 2186

                                                                  
Query: 184  tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
            ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 2187 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 2240



to top

>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                          
Query: 4      tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
              ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 191924 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 191982

                                                                          
Query: 64     gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
              |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 191983 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 192042

                                                                          
Query: 124    atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
               || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 192043 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 192102

                                                                    
Query: 184    tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
              ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 192103 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 192156



to top

>emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, BAC clone F17L22 (ESSAII project)
          Length = 107702

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                          
Query: 4      tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
              ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 105866 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 105924

                                                                          
Query: 64     gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
              |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 105925 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 105984

                                                                          
Query: 124    atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
               || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 105985 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 106044

                                                                    
Query: 184    tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
              ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 106045 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 106098



to top

>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII
           project)
          Length = 83029

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 521 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 579

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 580 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 639

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 640 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 699

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 700 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 753



to top

>gb|AF419563.1|AF419563 Arabidopsis thaliana AT4g21800/F17L22_260 mRNA, complete cds
          Length = 1372

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 469 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 527

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 528 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 587

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 588 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 647

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 648 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 701



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 925 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 973



to top

>gb|AY088472.1| Arabidopsis thaliana clone 6952 mRNA, complete sequence
          Length = 1372

 Score =  107 bits (54), Expect = 4e-20
 Identities = 190/234 (81%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
           ||||| ||||| || || ||||||||||| | ||||||| || |||||||| || || ||
Sbjct: 467 tctgtgattgagaaacgtgcagaccagcttg-attatgttcttgtggacactcctggtca 525

                                                                       
Query: 64  gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
           |||||| |||||||| ||||| ||||| || ||||| || ||||||||||| || |||||
Sbjct: 526 gattgagatctttacatggtctgcttctggggctataatcactgaagctttcgcttcaac 585

                                                                       
Query: 124 atttccaacagttgttgcatatgtggttgacacccccaggtcgacaaaccctgtgacctt 183
            || || || |||||  | ||||||||||| || ||| | ||  ||| |||  | || ||
Sbjct: 586 cttccccactgttgtcacctatgtggttgatactccccgttcctcaagcccaatcacttt 645

                                                                 
Query: 184 tatgagcaacatgatgtacgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||||||||||||| | ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 646 tatgagcaacatgctttacgcttgtagtattctctacaagactcggttgcctct 699



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 923 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 971



to top

>emb|BX827058.1|CNS0A39E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB90ZE04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1325

 Score =  103 bits (52), Expect = 7e-19
 Identities = 176/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  gcagaccagctggnattatgtgctggtggacaccccagggcagattgaaatctttacttg 81
           ||||||||||| | ||||||| || |||||||| || || |||||||| |||||||| ||
Sbjct: 476 gcagaccagcttg-attatgttcttgtggacactcctggtcagattgagatctttacatg 534

                                                                       
Query: 82  gtcggcttcaggagctatcataactgaagcttttgcatcaacatttccaacagttgttgc 141
           ||| ||||| || ||||| || ||||||||||| || ||||| || || || |||||  |
Sbjct: 535 gtctgcttctggggctataatcactgaagctttcgcttcaaccttccccactgttgtgac 594

                                                                       
Query: 142 atatgtggttgacacccccaggtcgacaaaccctgtgacctttatgagcaacatgatgta 201
            ||||||||||| || ||| | ||  ||| |||  |||| ||||||||| ||||| | ||
Sbjct: 595 ctatgtggttgatactccccgttcctcaagcccaatgacttttatgagcgacatgcttta 654

                                               
Query: 202 cgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||| || ||||| |||||||||||||| ||||||||
Sbjct: 655 cgcttgtagtattctctacaagactcggttgcctct 690



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatctt 505
           |||||||| ||| | ||||||||||| ||| ||| ||||||||||
Sbjct: 914 gaagcaagtgctgaggaatacatggaaactcacaaggctgatctt 958



to top

>emb|BX826827.1|CNS0A35N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB66ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 852

 Score =  103 bits (52), Expect = 7e-19
 Identities = 176/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  gcagaccagctggnattatgtgctggtggacaccccagggcagattgaaatctttacttg 81
           ||||||||||| | ||||||| || |||||||| || || |||||||| |||||||| ||
Sbjct: 17  gcagaccagcttg-attatgttcttgtggacactcctggtcagattgagatctttacatg 75

                                                                       
Query: 82  gtcggcttcaggagctatcataactgaagcttttgcatcaacatttccaacagttgttgc 141
           ||| ||||| || ||||| || ||||||||||| || ||||| || || || |||||  |
Sbjct: 76  gtctgcttctggggctataatcactgaagctttcgcttcaaccttccccactgttgtcac 135

                                                                       
Query: 142 atatgtggttgacacccccaggtcgacaaaccctgtgacctttatgagcaacatgatgta 201
            ||||||||||| || ||| | ||  ||| |||  | || ||||||||||||||| | ||
Sbjct: 136 ctatgtggttgatactccccgttcctcaagcccaatcacttttatgagcaacatgcttta 195

                                               
Query: 202 cgcgtgcagtatcctctacaagactcgtttgcctct 237
           ||| || ||||| |||||||||||||| ||||||||
Sbjct: 196 cgcttgtagtattctctacaagactcggttgcctct 231



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 461 gaagcaagcgctaatgaatacatggagacttacagggctgatcttgaca 509
           |||||||| ||| | ||||||||||| ||||||| ||||||||||||||
Sbjct: 455 gaagcaagtgctgaggaatacatggaaacttacaaggctgatcttgaca 503



to top

>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence
          Length = 127731

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 122/150 (81%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                          
Query: 4      tctgttattgaaaagcgagcagaccagctggnattatgtgctggtggacaccccagggca 63
              ||||||||||| || |||||||| || |||| | ||||| || ||||| || || || ||
Sbjct: 103009 tctgttattgagaaacgagcagatcaactgg-actatgttcttgtggatactcctggtca 102951

                                                                          
Query: 64     gattgaaatctttacttggtcggcttcaggagctatcataactgaagcttttgcatcaac 123
              |||||| || || || ||||| ||||| || |||||||| || ||||||||||| || ||
Sbjct: 102950 gattgagatattcacatggtctgcttccggtgctatcatcacagaagcttttgcctccac 102891

                                            
Query: 124    atttccaacagttgttgcatatgtggttga 153
              |||||| || || ||||| ||||| |||||
Sbjct: 102890 atttcccactgtagttgcctatgtagttga 102861



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 182    tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
              ||||||||||||||| | || || || ||||||||||| |||||
Sbjct: 102832 tttatgagcaacatgctctatgcttgtagtatcctctataagac 102789



to top

>ref|XM_323859.1| Neurospora crassa OR74A hypothetical protein (NCU04507.1) partial
           mRNA
          Length = 1200

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 178 gacctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
           |||||| |||||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 507 gaccttcatgagcaacatgctgtacgcctgcagtatcctttacaagac 554



to top

>ref|XM_951825.1| Neurospora crassa OR74A hypothetical protein (NCU04507.1) partial
           mRNA
          Length = 1200

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 178 gacctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
           |||||| |||||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 507 gaccttcatgagcaacatgctgtacgcctgcagtatcctttacaagac 554



to top

>ref|XM_369143.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00101.4) partial mRNA
          Length = 1227

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 179 acctttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
           |||||||||||||||||| | ||||| ||||||||||| ||||||||
Sbjct: 520 acctttatgagcaacatgctctacgcctgcagtatcctgtacaagac 566



to top

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 47      gtggacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcataac 105
               |||||||||||||| ||||| |||||||| || ||||| || || || |||||||||||
Sbjct: 1317399 gtggacaccccaggacagatcgaaatcttcacctggtccgcgtctggtgctatcataac 1317457



to top

>ref|XM_570415.1| Cryptococcus neoformans var. neoformans JEC21 aerobic
           respiration-related protein (CND04790) partial mRNA
          Length = 1702

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 47  gtggacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcataac 105
           |||||||||||||| ||||| |||||||| || ||||| || || || |||||||||||
Sbjct: 413 gtggacaccccaggacagatcgaaatcttcacctggtccgcgtctggtgctatcataac 471



to top

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 179     acctttatgagcaacatgatgtacgcgtgcagtatcctctacaagact 226
               ||||||||||| || ||| | ||||| |||||||| ||||||||||||
Sbjct: 2787659 acctttatgagtaatatgctttacgcctgcagtattctctacaagact 2787706



to top

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                           
Query: 182     tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
               ||||||||||||||| |||||||||||   ||||| ||||||||
Sbjct: 1207457 tttatgagcaacatgctgtacgcgtgctccatcctgtacaagac 1207414



to top

>ref|NM_211330.1| Eremothecium gossypii AFR428Cp (AFR428C), mRNA
          Length = 1152

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 182 tttatgagcaacatgatgtacgcgtgcagtatcctctacaagac 225
           ||||||||||||||| |||||||||||   ||||| ||||||||
Sbjct: 442 tttatgagcaacatgctgtacgcgtgctccatcctgtacaagac 485



to top

>gb|DQ425087.1| HIV-1 clone 27.10.5 from United Kingdom envelope glycoprotein (env)
            gene, partial cds
          Length = 1389

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 490  ttacagggctgatcttgacaag 511
            ||||||||||||||||||||||
Sbjct: 1208 ttacagggctgatcttgacaag 1229



to top

>ref|XM_793047.1| PREDICTED: Strongylocentrotus purpuratus similar to XPA binding
           protein 1 (LOC593577), partial mRNA
          Length = 705

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 50  gacaccccagggcagattgaaatctttacttggtcggcttcaggagctatcat 102
           ||||| ||||||||||| ||| |||| || ||||| || || |||||||||||
Sbjct: 545 gacactccagggcagatagaagtcttcacatggtcagcatctggagctatcat 597



to top

>gb|AC139527.19| Botryllus schlosseri clone subsf-532h24, complete sequence
          Length = 35618

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   gctgatcttgacaagcggatt 517
             |||||||||||||||||||||
Sbjct: 10783 gctgatcttgacaagcggatt 10763



to top

>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence
          Length = 216294

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 583    ggagaagtccaaaggacaaac 603
              |||||||||||||||||||||
Sbjct: 110129 ggagaagtccaaaggacaaac 110109



to top

>emb|AJ312094.1|LES312094 Lycopersicon esculentum mRNA for SPY protein (SPINDLY-related
            protein)
          Length = 3246

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 330  ctgactcatcgtactcatcttcatt 354
            |||||||| ||||||||||||||||
Sbjct: 2602 ctgactcaacgtactcatcttcatt 2578



to top

>emb|AJ312093.1|LES312093 Lycopersicon esculentum spy gene (SPINDLY-related gene), exons 1-18
          Length = 18005

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 330   ctgactcatcgtactcatcttcatt 354
             |||||||| ||||||||||||||||
Sbjct: 16360 ctgactcaacgtactcatcttcatt 16336



to top

>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete
             sequence
          Length = 202887

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 545   cgtaggaatgagaacatggaa 565
             |||||||||||||||||||||
Sbjct: 13539 cgtaggaatgagaacatggaa 13559



to top

>gb|BC023108.1| Mus musculus leukocyte receptor cluster (LRC) member 1, mRNA (cDNA
            clone MGC:28381 IMAGE:4021762), complete cds
          Length = 2288

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  actttgaagcatttcagaca 319
            ||||||||||||||||||||
Sbjct: 2055 actttgaagcatttcagaca 2036



to top

>gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, complete sequence
          Length = 158678

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 586    gaagtccaaaggacaaactg 605
              ||||||||||||||||||||
Sbjct: 150779 gaagtccaaaggacaaactg 150760



to top

>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 243051

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    actttgaagcatttcagaca 319
              ||||||||||||||||||||
Sbjct: 233684 actttgaagcatttcagaca 233665



to top

>ref|XM_746555.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g11820)
           partial mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 179 acctttatgagcaacatgatgtacgcgtgcagtatcctctacaa 222
           ||||| |||||||||||| | ||||| |||||||| || |||||
Sbjct: 478 accttcatgagcaacatgctttacgcttgcagtattctgtacaa 521



to top

>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence
          Length = 220895

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 586    gaagtccaaaggacaaactg 605
              ||||||||||||||||||||
Sbjct: 172719 gaagtccaaaggacaaactg 172738



to top

>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence
          Length = 214654

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    attgaggagagatatggaga 587
              ||||||||||||||||||||
Sbjct: 156842 attgaggagagatatggaga 156861



to top

>gb|AE004429.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 86
            of 93 of the complete chromosome
          Length = 11868

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  caagcacgagtttgctcttg 287
            ||||||||||||||||||||
Sbjct: 4878 caagcacgagtttgctcttg 4897



to top

>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 199047

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    actttgaagcatttcagaca 319
              ||||||||||||||||||||
Sbjct: 146439 actttgaagcatttcagaca 146458



to top

>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part
             of the NTNG1 gene for netrin G1, complete sequence
          Length = 122032

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   agactttgaagcatttcaga 317
             ||||||||||||||||||||
Sbjct: 81388 agactttgaagcatttcaga 81407



to top

>emb|BX005720.1|CNS08CKS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA1BD04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 288 agtggatgcaagactttgaagcatttca 315
           ||||||||||||| |||||||| |||||
Sbjct: 547 agtggatgcaagattttgaagcgtttca 520



to top

>emb|BX005719.1|CNS08CKR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA1BD04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 521

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 288 agtggatgcaagactttgaagcatttca 315
           ||||||||||||| |||||||| |||||
Sbjct: 393 agtggatgcaagattttgaagcgtttca 420



to top

>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence
          Length = 136680

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   actttgaagcatttcagaca 319
             ||||||||||||||||||||
Sbjct: 77199 actttgaagcatttcagaca 77218



to top

>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
              sequence
          Length = 404829

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    gtctctctcttgtgctggac 382
              ||||||||||||||||||||
Sbjct: 164122 gtctctctcttgtgctggac 164141



to top

>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence
          Length = 133452

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ttgcctctggtgctgacatt 249
             ||||||||||||||||||||
Sbjct: 66205 ttgcctctggtgctgacatt 66224



to top

>ref|NM_027203.2| Mus musculus leukocyte receptor cluster (LRC) member 1 (Leng1), mRNA
          Length = 2288

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  actttgaagcatttcagaca 319
            ||||||||||||||||||||
Sbjct: 2055 actttgaagcatttcagaca 2036



to top

>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence
          Length = 199695

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   gaacatggaaagattgagga 575
             ||||||||||||||||||||
Sbjct: 43664 gaacatggaaagattgagga 43683



to top

>dbj|AK037634.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130030P06 product:similar to LENG1
            PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence
          Length = 1871

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  actttgaagcatttcagaca 319
            ||||||||||||||||||||
Sbjct: 1701 actttgaagcatttcagaca 1682



to top

>gb|AC003037.1|AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome Systems Human BAC library)
             complete sequence
          Length = 213863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   actcatcgtactcatcttca 352
             ||||||||||||||||||||
Sbjct: 36776 actcatcgtactcatcttca 36795



to top

>gb|AC078994.3|AC078994 Homo sapiens chromosome 2 clone RP11-16B4 containing NRXN1 gene,
             partial cds, complete sequence
          Length = 179616

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   ggagagactagaagctgagc 545
             ||||||||||||||||||||
Sbjct: 34863 ggagagactagaagctgagc 34882



to top

>ref|XM_320117.2| Anopheles gambiae str. PEST ENSANGP00000001801
           (ENSANGG00000001516), partial mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 288 agtggatgcaagactttgaagcatttca 315
           ||||||||||||| |||||||| |||||
Sbjct: 395 agtggatgcaagattttgaagcgtttca 422



to top

>emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 in linkage group 22,
             complete sequence
          Length = 149478

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tatcataactgaagcttttg 116
             ||||||||||||||||||||
Sbjct: 22562 tatcataactgaagcttttg 22543



to top

>emb|BX571946.9| Zebrafish DNA sequence from clone DKEY-232H18 in linkage group 22,
             complete sequence
          Length = 179796

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tatcataactgaagcttttg 116
             ||||||||||||||||||||
Sbjct: 77581 tatcataactgaagcttttg 77600



to top

>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence
          Length = 201783

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   gtctctctcttgtgctggac 382
             ||||||||||||||||||||
Sbjct: 36209 gtctctctcttgtgctggac 36228



to top

>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence
          Length = 200031

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   actttgaagcatttcagaca 319
             ||||||||||||||||||||
Sbjct: 73600 actttgaagcatttcagaca 73619



to top

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cagattgaaatctttacttg 81
               ||||||||||||||||||||
Sbjct: 1087497 cagattgaaatctttacttg 1087478



to top

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   taactgaagcttttgcatca 121
             ||||||||||||||||||||
Sbjct: 32766 taactgaagcttttgcatca 32747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,237,598
Number of Sequences: 3902068
Number of extensions: 5237598
Number of successful extensions: 101201
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100950
Number of HSP's gapped (non-prelim): 239
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top