ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags20d22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G09, full insert sequence Length = 995 Score = 630 bits (318), Expect = e-177 Identities = 496/554 (89%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 148 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 207 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 208 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 267 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 268 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 327 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 328 caccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccg 387 ||| ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| | Sbjct: 341 cactggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctg 399 Query: 388 agttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcag 447 | |||||| |||||||| ||||||||||| || || ||||||||||||||||| |||| Sbjct: 400 aattccgtttcaaatggggctatgagatgcccgtagacgtattagcaaaatggatagcag 459 Query: 448 acaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatgg 507 ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 460 acaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatgg 519 Query: 508 tcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcact 567 || |||| ||||| || |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 520 tcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcact 579 Query: 568 tctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgg 627 |||||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 580 tctttggacataaggcaactagcgccagtcttaaggagcaggaagcaataaattttctgg 639 Query: 628 agaagaaaatgaag 641 |||||||||||||| Sbjct: 640 agaagaaaatgaag 653
>dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K05, full insert sequence Length = 1048 Score = 630 bits (318), Expect = e-177 Identities = 496/554 (89%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 172 Query: 148 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 207 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 173 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 232 Query: 208 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 267 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 233 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 292 Query: 268 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 327 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 293 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 352 Query: 328 caccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccg 387 ||| ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| | Sbjct: 353 cactggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctg 411 Query: 388 agttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcag 447 | |||||| |||||||| || |||||||| || || ||||||||||||||||| |||| Sbjct: 412 aattccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcag 471 Query: 448 acaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatgg 507 ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 472 acaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatgg 531 Query: 508 tcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcact 567 || |||| ||||| || |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 532 tcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcact 591 Query: 568 tctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgg 627 |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 592 tctttggacataaggcaactagcgccggtcttaaggagcaggaagcaataaattttctgg 651 Query: 628 agaagaaaatgaag 641 |||||||||||||| Sbjct: 652 agaagaaaatgaag 665
>dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C02, full insert sequence Length = 1043 Score = 630 bits (318), Expect = e-177 Identities = 496/554 (89%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 148 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 207 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 208 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 267 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 268 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 327 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 328 caccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccg 387 ||| ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| | Sbjct: 341 cactggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctg 399 Query: 388 agttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcag 447 | |||||| |||||||| || |||||||| || || ||||||||||||||||| |||| Sbjct: 400 aattccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcag 459 Query: 448 acaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatgg 507 ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 460 acaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatgg 519 Query: 508 tcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcact 567 || |||| ||||| || |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 520 tcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcact 579 Query: 568 tctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgg 627 |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 580 tctttggacataaggcaactagcgccggtcttaaggagcaggaagcaataaattttctgg 639 Query: 628 agaagaaaatgaag 641 |||||||||||||| Sbjct: 640 agaagaaaatgaag 653
>dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A07, full insert sequence Length = 1042 Score = 630 bits (318), Expect = e-177 Identities = 496/554 (89%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 173 Query: 148 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 207 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 174 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 233 Query: 208 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 267 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 234 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 293 Query: 268 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 327 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 294 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 353 Query: 328 caccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccg 387 ||| ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| | Sbjct: 354 cactggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctg 412 Query: 388 agttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcag 447 | |||||| |||||||| || |||||||| || || ||||||||||||||||| |||| Sbjct: 413 aattccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcag 472 Query: 448 acaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatgg 507 ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 473 acaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatgg 532 Query: 508 tcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcact 567 || |||| ||||| || |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 533 tcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcact 592 Query: 568 tctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgg 627 |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 593 tctttggacataaggcaactagcgccggtcttaaggagcaggaagcaataaattttctgg 652 Query: 628 agaagaaaatgaag 641 |||||||||||||| Sbjct: 653 agaagaaaatgaag 666
>dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mRNA for alpha 1 subunit of 20S proteasome, complete cds Length = 1010 Score = 630 bits (318), Expect = e-177 Identities = 496/554 (89%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 138 Query: 148 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 207 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 139 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 198 Query: 208 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 267 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 199 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 258 Query: 268 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 327 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 259 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 318 Query: 328 caccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccg 387 ||| ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| | Sbjct: 319 cactggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctg 377 Query: 388 agttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcag 447 | |||||| |||||||| || |||||||| || || ||||||||||||||||| |||| Sbjct: 378 aattccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcag 437 Query: 448 acaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatgg 507 ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 438 acaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatgg 497 Query: 508 tcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcact 567 || |||| ||||| || |||||||| ||||| || ||||| |||||||| |||||||||| Sbjct: 498 tcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcact 557 Query: 568 tctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgg 627 |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 558 tctttggacataaggcaactagcgccggtcttaaggagcaggaagcaataaattttctgg 617 Query: 628 agaagaaaatgaag 641 |||||||||||||| Sbjct: 618 agaagaaaatgaag 631
>ref|XM_470540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 628 bits (317), Expect = e-177 Identities = 495/553 (89%), Gaps = 1/553 (0%) Strand = Plus / Plus Query: 89 atgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggagggc 148 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggagggc 60 Query: 149 cgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatc 208 ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 61 cgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatc 120 Query: 209 ggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagttg 268 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 ggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagttg 180 Query: 269 ttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgcc 328 |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| ||| Sbjct: 181 ctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgcc 240 Query: 329 accggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccga 388 || ||||||||||||||||| |||| |||| |||| ||||||||| ||||| ||||| || Sbjct: 241 actggcctcacagctgatgcaaggt-ccttagtctaccaagcaaggaatgaggcagctga 299 Query: 389 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 448 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 300 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 359 Query: 449 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 508 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 360 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 419 Query: 509 cctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcactt 568 | |||| ||||| || |||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 420 cttgggctatgacgaagagaaaaacgctcaactattcaaatgtgacccggcaggtcactt 479 Query: 569 ctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctgga 628 ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 480 ctttggacataaggcaactagcgccggtcttaaggagcaggaagcaataaattttctgga 539 Query: 629 gaagaaaatgaag 641 ||||||||||||| Sbjct: 540 gaagaaaatgaag 552
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 565 bits (285), Expect = e-158 Identities = 490/557 (87%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 85 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 144 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 87 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 146 Query: 145 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 204 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 147 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 206 Query: 205 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 264 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gatcggcgtccgcggcgcggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 266 Query: 265 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 324 |||| ||||| | || ||| | || ||| | ||| | || ||||||||| ||| ||||| Sbjct: 267 gttgctggatcagacgagcgtgacacacttgttcccgatcaccaagtacgtcggattgct 326 Query: 325 tgccaccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcag 384 |||||| ||||||||||||||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 327 tgccactggcctcacagctgatgcaaggtca-ttggtttcccaagcaaggaacgaagcag 385 Query: 385 ccgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattg 444 | ||||| ||| |||||||| ||||||||||| || ||||| |||||||||||||||| Sbjct: 386 ctgagtttcgtttcaaatggggctatgagatgccagttgatgtgttagcaaaatggattg 445 Query: 445 cagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgcta 504 | |||||||| ||| | |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 446 ctgacaaagctcaagtttacacgcaacatgcatacatgagaccccttggagtagttgcta 505 Query: 505 tggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtc 564 ||||| |||| || || || ||||||||||| || || ||||| || ||||| || |||| Sbjct: 506 tggtcttgggctacgacgaagagaaaaatgcacaactattcaaatgcgaccctgcgggtc 565 Query: 565 acttctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttc 624 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 566 acttctttggacataaggcaactagtgccgggctcaaggagcaggaagcaataaattttt 625 Query: 625 tggagaagaaaatgaag 641 ||||||||||||||||| Sbjct: 626 tggagaagaaaatgaag 642
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 549 bits (277), Expect = e-153 Identities = 488/557 (87%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 85 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 144 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 78 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 137 Query: 145 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 204 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 138 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 197 Query: 205 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 264 |||||||||||| ||| ||||||||||||||| || || ||||||||||||||||| || Sbjct: 198 gatcggcgtccgcggcgcggactccgtctgcgttgttacgcagaagaaagtcccggataa 257 Query: 265 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 324 |||| ||||| | || ||| | || ||||| ||| | || ||||||||| ||| ||||| Sbjct: 258 gttgctggatcagacgagcgtgacacacctgttcccgatcaccaagtacgtcggattgct 317 Query: 325 tgccaccggcctcacagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcag 384 |||||| ||||| |||||||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 318 tgccactggccttacagctgatggtaggtca-ttggtttcccaagcaaggaacgaagcag 376 Query: 385 ccgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattg 444 | ||||| ||| |||||||| || |||||||| || ||||| |||||||||||||||| Sbjct: 377 ctgagtttcgtttcaaatggggctacgagatgccagttgatgtgttagcaaaatggattg 436 Query: 445 cagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgcta 504 | |||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 437 ctgacaaagctcaagtttacacgcagcatgcatacatgagaccccttggagtagttgcta 496 Query: 505 tggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtc 564 ||||| |||| || ||||| ||||||||||| || || |||||||| ||||| || |||| Sbjct: 497 tggtcttgggctacgatgaagagaaaaatgcccaactattcaagtgcgaccctgctggtc 556 Query: 565 acttctttggacacaaggcaactagtgccggacttaaggagcaggaagcaataaattttc 624 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 557 acttctttggacataaggcaactagtgccgggctcaaggagcaggaagcaataaattttc 616 Query: 625 tggagaagaaaatgaag 641 ||||||||||||||||| Sbjct: 617 tggagaagaaaatgaag 633
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194339 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194280 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccgg 260 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194279 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194243 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194552 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194493 Query: 148 ccgcctctaccaagtcg 164 ||||||||||||||||| Sbjct: 4194492 ccgcctctaccaagtcg 4194476 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 aggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatga 639 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4192825 aggcaactagcgccggtcttaaggagcaggaagcaataaattttctggagaagaaaatga 4192766 Query: 640 ag 641 || Sbjct: 4192765 ag 4192764 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 497 agttgctatggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccc 556 ||||||||||||| |||| ||||| || |||||||| ||||| || ||||| |||||||| Sbjct: 4193063 agttgctatggtcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgaccc 4193004 Query: 557 cgcaggtcacttctttggacacaagg 582 |||||||||||||||||||| |||| Sbjct: 4193003 ggcaggtcacttctttggacataagg 4192978 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 439 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 498 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193239 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193180 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 339 cagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccgagttccgtaaa 398 |||||||||| |||||| || |||| ||||||||| ||||| ||||| || |||||| Sbjct: 4193453 cagctgatgcaaggtcc-ttagtctaccaagcaaggaatgaggcagctgaattccgtttc 4193395 Query: 399 aaatggggatatgagatgcctgtggatgtattagcaaaatgg 440 |||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193394 aaatggggctacgagatgcccgtagacgtattagcaaaatgg 4193353
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194448 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194389 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccgg 260 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194388 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194352 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194661 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194602 Query: 148 ccgcctctaccaagtcg 164 ||||||||||||||||| Sbjct: 4194601 ccgcctctaccaagtcg 4194585 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 aggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatga 639 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4192934 aggcaactagcgccggtcttaaggagcaggaagcaataaattttctggagaagaaaatga 4192875 Query: 640 ag 641 || Sbjct: 4192874 ag 4192873 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 497 agttgctatggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccc 556 ||||||||||||| |||| ||||| || |||||||| ||||| || ||||| |||||||| Sbjct: 4193172 agttgctatggtcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgaccc 4193113 Query: 557 cgcaggtcacttctttggacacaagg 582 |||||||||||||||||||| |||| Sbjct: 4193112 ggcaggtcacttctttggacataagg 4193087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 439 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 498 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193348 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193289 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 339 cagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccgagttccgtaaa 398 |||||||||| |||||| || |||| ||||||||| ||||| ||||| || |||||| Sbjct: 4193562 cagctgatgcaaggtcc-ttagtctaccaagcaaggaatgaggcagctgaattccgtttc 4193504 Query: 399 aaatggggatatgagatgcctgtggatgtattagcaaaatgg 440 |||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193503 aaatggggctacgagatgcccgtagacgtattagcaaaatgg 4193462
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 94976 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 94917 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccgg 260 |||||||||||||||||||| ||||||||||| |||| Sbjct: 94916 gactccgtctgcgtcgtcacacagaagaaagtgccgg 94880 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95189 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 95130 Query: 148 ccgcctctaccaagtcg 164 ||||||||||||||||| Sbjct: 95129 ccgcctctaccaagtcg 95113 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 aggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatga 639 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93462 aggcaactagcgccggtcttaaggagcaggaagcaataaattttctggagaagaaaatga 93403 Query: 640 ag 641 || Sbjct: 93402 ag 93401 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 497 agttgctatggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccc 556 ||||||||||||| |||| ||||| || |||||||| ||||| || ||||| |||||||| Sbjct: 93700 agttgctatggtcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgaccc 93641 Query: 557 cgcaggtcacttctttggacacaagg 582 |||||||||||||||||||| |||| Sbjct: 93640 ggcaggtcacttctttggacataagg 93615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 439 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 498 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 93876 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 93817 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 339 cagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccgagttccgtaaa 398 |||||||||| |||||| || |||| ||||||||| ||||| ||||| || |||||| Sbjct: 94090 cagctgatgcaaggtcc-ttagtctaccaagcaaggaatgaggcagctgaattccgtttc 94032 Query: 399 aaatggggatatgagatgcctgtggatgtattagcaaaatgg 440 |||||||| || |||||||| || || ||||||||||||||| Sbjct: 94031 aaatggggctacgagatgcccgtagacgtattagcaaaatgg 93990
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 22954 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 22895 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccgg 260 |||||||||||||||||||| ||||||||||| |||| Sbjct: 22894 gactccgtctgcgtcgtcacacagaagaaagtgccgg 22858 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 88 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 147 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23167 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 23108 Query: 148 ccgcctctaccaagtcg 164 ||||||||||||||||| Sbjct: 23107 ccgcctctaccaagtcg 23091 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 580 aggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatga 639 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21440 aggcaactagcgccggtcttaaggagcaggaagcaataaattttctggagaagaaaatga 21381 Query: 640 ag 641 || Sbjct: 21380 ag 21379 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 497 agttgctatggtcctgggttatgatgaggagaaaaatgctcagctcttcaagtgtgaccc 556 ||||||||||||| |||| ||||| || |||||||| ||||| || ||||| |||||||| Sbjct: 21678 agttgctatggtcttgggctatgacgaagagaaaaacgctcaactattcaaatgtgaccc 21619 Query: 557 cgcaggtcacttctttggacacaagg 582 |||||||||||||||||||| |||| Sbjct: 21618 ggcaggtcacttctttggacataagg 21593 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 439 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 498 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 21854 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 21795 Score = 67.9 bits (34), Expect = 4e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 339 cagctgatgcgaggtcccttggtctcccaagcaagaaatgaagcagccgagttccgtaaa 398 |||||||||| |||||| || |||| ||||||||| ||||| ||||| || |||||| Sbjct: 22068 cagctgatgcaaggtcc-ttagtctaccaagcaaggaatgaggcagctgaattccgtttc 22010 Query: 399 aaatggggatatgagatgcctgtggatgtattagcaaaatgg 440 |||||||| || |||||||| || || ||||||||||||||| Sbjct: 22009 aaatggggctacgagatgcccgtagacgtattagcaaaatgg 21968
>emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-type subunit Length = 1035 Score = 119 bits (60), Expect = 1e-23 Identities = 192/236 (81%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 |||||||| ||||| ||||||||| | | ||||||||||||||||| | || | ||| Sbjct: 384 ggatatgaaatgccagtggatgtactgtctaaatggattgcagacaagtctcaggtttac 443 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || |||||||| || |||||||||||||| |||||||||||| | |||| ||||||| Sbjct: 444 acacagcatgcctatatgagaccccttggagtagttgctatgattttgggcattgatgag 503 Query: 525 gagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaaggca 584 |||||| | |||||||||||||||||||| || ||||| || ||||| || ||||| Sbjct: 504 gagaaaggaccccagctcttcaagtgtgaccctgctggtcatttttttggtcataaggct 563 Query: 585 actagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 || ||||| ||| ||| || || || ||||| |||||| |||||||||||||||| Sbjct: 564 acaagtgctggatctaaagaacaagaggcaattaattttttggagaagaaaatgaa 619 Score = 67.9 bits (34), Expect = 4e-08 Identities = 133/166 (80%) Strand = Plus / Plus Query: 109 cggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagta 168 ||||||||| || ||||| || |||||||| || || || || |||| |||||||| || Sbjct: 89 cggctacgatcgtcacattacgatcttctctcccgaaggtcgtctctttcaagtcgaata 148 Query: 169 cgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggactc 228 ||||| ||||| || ||| |||| || | ||||| || |||||||| || |||||||| Sbjct: 149 tgcgtttaaggctgtgaaggcggccggaattacctctattggcgtccgtggaaaggactc 208 Query: 229 cgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 ||| || || || || |||||||||||||| |||||| | |||||| Sbjct: 209 cgtttgtgttgttactcagaagaaagtccctgacaagctattggat 254
>gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA, complete cds Length = 994 Score = 103 bits (52), Expect = 7e-19 Identities = 220/276 (79%) Strand = Plus / Plus Query: 366 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 425 |||||||||||||||||||| ||||| || | || ||||||||||||||||| ||| Sbjct: 391 caagcaagaaatgaagcagctgagtttcgctttacatatggatatgagatgcctgtagat 450 Query: 426 gtattagcaaaatggattgcagacaaagcacaaatatacacgcagcatgcatacatgaga 485 |||||||| |||||||||||||| ||| ||||| | || || || ||||| || |||||| Sbjct: 451 gtattagctaaatggattgcagataaatcacaagtctatactcaacatgcttatatgaga 510 Query: 486 ccccttggtgtagttgctatggtcctgggttatgatgaggagaaaaatgctcagctcttc 545 || || || |||||||||||||| ||||| |||||| || | ||||||| | | Sbjct: 511 ccactcggagtagttgctatggttttgggtattgatgatgaatatggacctcagctatac 570 Query: 546 aagtgtgaccccgcaggtcacttctttggacacaaggcaactagtgccggacttaaggag 605 || ||||| || || ||||| | |||||| ||||||||||| ||||| ||| | ||||| Sbjct: 571 aaatgtgatccagctggtcattactttggtcacaaggcaacaagtgctggattgaaggac 630 Query: 606 caggaagcaataaattttctggagaagaaaatgaag 641 || || ||||| ||||| |||| ||||| |||||| Sbjct: 631 caagaggcaattaatttcttggaaaagaagatgaag 666
>gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence Length = 1053 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| |||||||| || |||||||||||||| |||||||||||| | |||| |||| Sbjct: 450 tacacacagcatgcctatatgagaccccttggagtagttgctatgattttgggcattgat 509 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 ||||||||| | ||||||||||| |||||||| || ||||| || ||||| || ||| Sbjct: 510 gaggagaaagggccccagctcttcaaatgtgaccctgctggtcatttttttggtcataag 569 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 || || ||||||||| ||| ||||| || ||||| || ||| |||||||||||||||| Sbjct: 570 gctacaagtgccggatctaaagagcaagaggcaattaactttttggagaagaaaatgaa 628
>ref|XM_479149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>ref|XM_507390.1| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>ref|XM_506462.2| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1610 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK102448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O06, full insert sequence Length = 1609 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK069145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E07, full insert sequence Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>dbj|AK058885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C05, full insert sequence Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>dbj|AB032062.1| Oryza sativa (japonica cultivar-group) OsPAA2 mRNA for alpha 1-2 subunit of 20S proteasome, complete cds Length = 1004 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 78 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 137 Query: 166 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 225 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 138 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 197 Query: 226 ctccgtctgcgtcgtcaccca 246 |||||||| |||| ||||||| Sbjct: 198 ctccgtctacgtcctcaccca 218
>ref|XM_421242.1| PREDICTED: Gallus gallus similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (LOC423326), mRNA Length = 1036 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 84 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 143 Query: 165 agta 168 |||| Sbjct: 144 agta 147
>emb|CR390124.1| Gallus gallus finished cDNA, clone ChEST163e7 Length = 956 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 85 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 144 Query: 165 agta 168 |||| Sbjct: 145 agta 148
>gb|DQ213268.1| Taeniopygia guttata clone 0061P0013H01 proteasome subunit alpha type 6-like mRNA, complete sequence Length = 977 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 ||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 91 gcgccggcttcgaccggcacatcaccatcttctcgcccgagggccgcctctaccaagtcg 150 Query: 165 a 165 | Sbjct: 151 a 151
>ref|NM_165567.1| Drosophila melanogaster CG30382-RA (CG30382), mRNA Length = 735 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 34 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 92
>ref|NM_165565.1| Drosophila melanogaster Proteasome 6 subunit CG18495-RA, transcript variant A (Prosalpha6), mRNA Length = 887 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 86 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 144
>ref|NM_080098.2| Drosophila melanogaster Proteasome 6 subunit CG18495-RB, transcript variant B (Prosalpha6), mRNA Length = 969 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 168 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 226
>gb|AY118637.1| Drosophila melanogaster SD02332 full insert cDNA Length = 971 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 138 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 196
>gb|AF144749.1|AF144749 Drosophila melanogaster 20S proteasome subunit alpha1 mRNA, complete cds Length = 888 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 100 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 158
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.1 mRNA, complete cds Length = 1093 Score = 69.9 bits (35), Expect = 1e-08 Identities = 137/171 (80%) Strand = Plus / Plus Query: 104 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 163 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 6e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggttctaggtattgat 548 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 || |||| | ||| || | |||||||||||| || || || || | || |||||| Sbjct: 549 gaagagagaggacctctactttacaagtgtgacccagctggacatttttacggtcacaag 608 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 ||||||||||| || | || || || |||||| | ||||| |||||||||||||||| Sbjct: 609 gcaactagtgctggtatgaaagaacaagaagcagtcaatttcttggagaagaaaatgaa 667
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.2 mRNA, complete cds Length = 1114 Score = 69.9 bits (35), Expect = 1e-08 Identities = 137/171 (80%) Strand = Plus / Plus Query: 104 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 163 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 150 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 209 Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 210 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 269 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 270 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 320 Score = 54.0 bits (27), Expect = 6e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 507 tacacacaacatgcttacatgagaccccttggagtagttgccatggttctaggtattgat 566 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 || |||| | ||| || | |||||||||||| || || || || | || |||||| Sbjct: 567 gaagagagaggacctctactttacaagtgtgacccagctggacatttttacggtcacaag 626 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 ||||||||||| || | || || || |||||| | ||||| |||||||||||||||| Sbjct: 627 gcaactagtgctggtatgaaagaacaagaagcagtcaatttcttggagaagaaaatgaa 685
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 741 Score = 69.9 bits (35), Expect = 1e-08 Identities = 137/171 (80%) Strand = Plus / Plus Query: 104 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 163 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 16 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 75 Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 76 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 135 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 136 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 186 Score = 54.0 bits (27), Expect = 6e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 373 tacacacaacatgcttacatgagaccccttggagtagttgccatggttctaggtattgat 432 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 || |||| | ||| || | |||||||||||| || || || || | || |||||| Sbjct: 433 gaagagagaggacctctactttacaagtgtgacccagctggacatttttacggtcacaag 492 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 ||||||||||| || | || || || |||||| | ||||| |||||||||||||||| Sbjct: 493 gcaactagtgctggtatgaaagaacaagaagcagtcaatttcttggagaagaaaatgaa 551
>ref|XM_963562.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 6 (LOC657082), mRNA Length = 815 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 115 cgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgtt 174 |||||||||||| ||||| |||||||| ||||| || ||||||||||||||||| || || Sbjct: 27 cgaccgccacattaccattttctcccccgaggggcggctctaccaagtcgagtatgcctt 86 Query: 175 caa 177 ||| Sbjct: 87 caa 89
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 1014 Score = 69.9 bits (35), Expect = 1e-08 Identities = 137/171 (80%) Strand = Plus / Plus Query: 104 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 163 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 75 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 134 Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 135 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 194 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 195 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 432 tacacacaacatgcttacatgagaccccttggagtagttgccatggttctaggtattgat 491 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 || |||| | ||| || | |||||||||||| || || || || | || |||||| Sbjct: 492 gaagagagaggacctctactttacaagtgtgacccagctggacatttttacggtcacaag 551 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 ||||||||||| || | || || || |||||| | ||||| |||||||||||||||| Sbjct: 552 gcaactagtgctggtatgaaagaacaagaagcagtcaatttcttggagaagaaaatgaa 610
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA, complete cds Length = 1113 Score = 69.9 bits (35), Expect = 1e-08 Identities = 137/171 (80%) Strand = Plus / Plus Query: 104 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 163 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 164 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 223 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 224 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 6e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgat 521 ||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggttctaggtattgat 548 Query: 522 gaggagaaaaatgctcagctcttcaagtgtgaccccgcaggtcacttctttggacacaag 581 || |||| | ||| || | |||||||||||| || || || || | || |||||| Sbjct: 549 gaagagagaggacctctactttacaagtgtgacccagctggacatttttacggtcacaag 608 Query: 582 gcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatgaa 640 ||||||||||| || | || || || |||||| | ||||| |||||||||||||||| Sbjct: 609 gcaactagtgctggtatgaaagaacaagaagcagtcaatttcttggagaagaaaatgaa 667
>emb|CR733852.2|CNS0GT0R Tetraodon nigroviridis full-length cDNA Length = 1005 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 233
>emb|CR723142.2|CNS0GKX8 Tetraodon nigroviridis full-length cDNA Length = 990 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 171 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 220
>emb|CR707063.2|CNS0G8IR Tetraodon nigroviridis full-length cDNA Length = 996 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 181 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 230
>emb|CR695416.2|CNS0FZJ8 Tetraodon nigroviridis full-length cDNA Length = 1003 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 174 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 223
>emb|CR664013.2|CNS0FBBN Tetraodon nigroviridis full-length cDNA Length = 974 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 145 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 194
>emb|CR663453.2|CNS0FAW3 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 170 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 219
>emb|CR653857.2|CNS0F3HJ Tetraodon nigroviridis full-length cDNA Length = 998 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 169 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 218
>gb|AY231750.1| Drosophila yakuba clone yak-em_Prosalpha6 mRNA sequence Length = 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 180 ||||| || |||||||| |||||||| |||||||||||||| |||||||| || ||||| Sbjct: 34 cacattacaatcttctctccggagggacgcctctaccaagtggagtacgcctttaaggc 92
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence Length = 120437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 366 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 425 |||||||||||||||||||| ||||| || | |||| |||||||||||||| |||||| Sbjct: 46358 caagcaagaaatgaagcagctgagtttcgccataaatttggatatgagatgccggtggat 46299 Query: 426 gtattagcaaaatgg 440 || || || |||||| Sbjct: 46298 gtgttggctaaatgg 46284
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 160 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 25240037 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 25239983 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 167 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 226 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 25239841 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 25239782 Query: 227 tccgtctgcgtcgtcaccca 246 ||||||| |||| ||||||| Sbjct: 25239781 tccgtctacgtcctcaccca 25239762
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 106 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 160 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 56708 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 56654 Score = 40.1 bits (20), Expect = 8.7 Identities = 65/80 (81%) Strand = Plus / Minus Query: 167 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 226 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 56512 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 56453 Query: 227 tccgtctgcgtcgtcaccca 246 ||||||| |||| ||||||| Sbjct: 56452 tccgtctacgtcctcaccca 56433
>gb|BC072719.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b, mRNA (cDNA clone MGC:91778 IMAGE:7039953), complete cds Length = 1350 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 176 aaggc 180 ||||| Sbjct: 156 aaggc 160
>gb|AF354751.1| Danio rerio proteasome subunit alpha Type 6-B (psma6b) mRNA, complete cds Length = 1191 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 331 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 390 Query: 176 aaggc 180 ||||| Sbjct: 391 aaggc 395
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 126 tcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcggtca 185 ||||||||||||||||||| || || || ||||| |||||||| || ||||||||| ||| Sbjct: 29 tcaccatcttctccccggacggacggctgtaccaggtcgagtatgccttcaaggcgatca 88 Query: 186 a 186 | Sbjct: 89 a 89
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 20870353 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 20870412 Query: 171 c 171 | Sbjct: 20870413 c 20870413
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagt 162 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43240 cacatcacgatcttctctccggagggacgcctctaccaagt 43280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagt 162 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40130 cacatcacgatcttctctccggagggacgcctctaccaagt 40170
>ref|NM_131795.2| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b (psma6b), mRNA Length = 1350 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 176 aaggc 180 ||||| Sbjct: 156 aaggc 160
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 62579 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 62638 Query: 171 c 171 | Sbjct: 62639 c 62639
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 145382 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 145441 Query: 171 c 171 | Sbjct: 145442 c 145442
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagt 162 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43113 cacatcacgatcttctctccggagggacgcctctaccaagt 43073 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagt 162 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40003 cacatcacgatcttctctccggagggacgcctctaccaagt 39963
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 50 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 109 Query: 171 c 171 | Sbjct: 110 c 110
>emb|BX072129.1|CNS09RTH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||||||||||||||| | Sbjct: 840 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgcctctaccaagttg 781 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 780 agtatgccttcaaggc 765
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 128 accatcttctccccggagggccgcctctaccaagtcgagtacgc 171 ||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 1579176 accatcttctccccggacggacgcctctatcaggtcgagtacgc 1579133 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 112 ctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgc 171 |||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1050899 ctacgaccgcgggatcactatcttctcgccggacggacgcctctaccaggtcgagtacgc 1050840
>ref|NM_011968.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 6 (Psma6), mRNA Length = 945 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>ref|XM_501500.1| Yarrowia lipolytica CLIB122, YALI0C06039g predicted mRNA Length = 735 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 119 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 177 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 25 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 83
>gb|U60288.1|MMU60288 Mus musculus proteasome subunit iota mRNA, complete cds Length = 945 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 119 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 177 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 777476 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 777418
>ref|XM_514761.1| PREDICTED: Pan troglodytes similar to Proteasome subunit alpha type 7 (Proteasome subunit RC6-1) (LOC458383), mRNA Length = 920 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 130 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 189 Query: 171 cg 172 || Sbjct: 190 cg 191
>gb|BC004427.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, transcript variant 1, mRNA (cDNA clone MGC:3755 IMAGE:2819923), complete cds Length = 967 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 78 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 137 Query: 171 cg 172 || Sbjct: 138 cg 139
>gb|BC008222.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone MGC:6440 IMAGE:2581897), complete cds Length = 892 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 171 cg 172 || Sbjct: 89 cg 90
>ref|XM_956973.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 124 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 169 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|XM_324651.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 124 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 169 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|NM_001008217.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 171 cg 172 || Sbjct: 128 cg 129
>ref|NM_011969.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 171 cg 172 || Sbjct: 94 cg 95
>gb|BC014999.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, mRNA (cDNA clone IMAGE:4851079), containing frame-shift errors Length = 798 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 88 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 147 Query: 171 cg 172 || Sbjct: 148 cg 149
>emb|CR731238.2|CNS0GR63 Tetraodon nigroviridis full-length cDNA Length = 975 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 158 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 206
>emb|CR640479.2|CNS0ET5X Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 232
>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the PSMA7 gene for proteasome (prosome, macropain) subunit alpha type 7, the HRH3 gene for histamine receptor H3, the SS18L1 gene for synovial sarcoma translocation gene on chromosome 18-like 1, the GTPBP5 gene for GTP binding protein 5 (putative), the 3' end of the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and seven CpG islands, complete sequence Length = 100976 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 92377 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 92436 Query: 171 cg 172 || Sbjct: 92437 cg 92438
>gb|BT007466.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 171 cg 172 || Sbjct: 65 cg 66
>gb|BT007165.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 171 cg 172 || Sbjct: 65 cg 66
>emb|CR857931.1| Pongo pygmaeus mRNA; cDNA DKFZp469N104 (from clone DKFZp469N104) Length = 1056 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 58 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 117 Query: 171 cg 172 || Sbjct: 118 cg 119
>emb|CR615593.1| full-length cDNA clone CS0DI074YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 36 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 95 Query: 171 cg 172 || Sbjct: 96 cg 97
>emb|CR624293.1| full-length cDNA clone CS0DF011YJ24 of Fetal brain of Homo sapiens (human) Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 54 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 113 Query: 171 cg 172 || Sbjct: 114 cg 115
>emb|CR622362.1| full-length cDNA clone CS0DM009YO06 of Fetal liver of Homo sapiens (human) Length = 889 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 171 cg 172 || Sbjct: 175 cg 176
>emb|CR618955.1| full-length cDNA clone CS0DB003YC01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 926 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 171 cg 172 || Sbjct: 175 cg 176
>emb|CR616396.1| full-length cDNA clone CS0DC027YF09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 171 cg 172 || Sbjct: 147 cg 148
>emb|CR611945.1| full-length cDNA clone CS0DK003YA15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 140 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 199 Query: 171 cg 172 || Sbjct: 200 cg 201
>emb|CR603718.1| full-length cDNA clone CS0DI042YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 171 cg 172 || Sbjct: 147 cg 148
>emb|CR600945.1| full-length cDNA clone CS0DC026YF03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 142 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 201 Query: 171 cg 172 || Sbjct: 202 cg 203
>emb|CR600734.1| full-length cDNA clone CS0DC018YO10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 119 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 178 Query: 171 cg 172 || Sbjct: 179 cg 180
>emb|CR596694.1| full-length cDNA clone CS0DI011YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 815 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 104 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163 Query: 171 cg 172 || Sbjct: 164 cg 165
>dbj|AK146765.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920051K20 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 53 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 112 Query: 171 cg 172 || Sbjct: 113 cg 114
>dbj|AK165563.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430008L02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 896 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 49 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 108 Query: 171 cg 172 || Sbjct: 109 cg 110
>dbj|AK168234.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730069P12 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 914 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 66 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 125 Query: 171 cg 172 || Sbjct: 126 cg 127
>dbj|AK088615.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021K02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 888 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 41 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 100 Query: 171 cg 172 || Sbjct: 101 cg 102
>gb|BC001895.1|BC001895 Homo sapiens, Similar to proteasome (prosome, macropain) subunit, alpha type, 7, clone IMAGE:3535769, mRNA Length = 805 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 93 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 152 Query: 171 cg 172 || Sbjct: 153 cg 154
>ref|NM_002792.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 120 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 179 Query: 171 cg 172 || Sbjct: 180 cg 181
>gb|AF054185.1|AF054185 Homo sapiens proteasome subunit HSPC mRNA, complete cds Length = 969 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 90 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 149 Query: 171 cg 172 || Sbjct: 150 cg 151
>gb|BC014752.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone IMAGE:4218885), with apparent retained intron Length = 1572 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 27 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 86 Query: 171 cg 172 || Sbjct: 87 cg 88
>ref|XM_579184.1| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 171 cg 172 || Sbjct: 128 cg 129
>gb|AY892046.1| Synthetic construct Homo sapiens clone FLH024047.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 171 cg 172 || Sbjct: 65 cg 66
>gb|AY892045.1| Synthetic construct Homo sapiens clone FLH024046.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 171 cg 172 || Sbjct: 65 cg 66
>gb|AY889591.1| Synthetic construct Homo sapiens clone FLH024051.01X proteasome subunit alpha type 7 (PSMA7) mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 171 cg 172 || Sbjct: 65 cg 66
>gb|AF019662.1|AF019662 Mus musculus C6-I proteasome chain mRNA, complete cds Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 171 cg 172 || Sbjct: 94 cg 95
>gb|AF022815.1|AF022815 Homo sapiens proteasome subunit XAPC7 mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 171 cg 172 || Sbjct: 89 cg 90
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 163243 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163184 Query: 171 cg 172 || Sbjct: 163183 cg 163182
>dbj|D30804.1|RATPSRC6I Rat mRNA for proteasome subunit RC6-1, complete cds Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 42 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 101 Query: 171 cg 172 || Sbjct: 102 cg 103
>ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ peptidase/ threonine endopeptidase AT5G35590 (PAA1) mRNA, complete cds Length = 1037 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 576 cacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaa 635 ||||||||||||||||| || | ||||| || |||||| | ||||| ||||||||||| Sbjct: 536 cacaaggcaactagtgctggtatgaaggaacaagaagcagtcaatttcttggagaagaaa 595 Query: 636 atgaa 640 ||||| Sbjct: 596 atgaa 600 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 525 gagaa 529 ||||| Sbjct: 485 gagaa 489 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 233 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 194 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 235
>gb|AY440091.1| Armigeres subalbatus ASAP ID: 39029 proteasome complex subunit mRNA sequence Length = 721 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||||||||| || || ||||| |||||||| || ||||| ||||| ||||| || ||| Sbjct: 138 gaccgccacattacgattttctctccggagggtcgtctctatcaagttgagtatgccttc 197 Query: 176 aaggc 180 ||||| Sbjct: 198 aaggc 202
>gb|BC055520.1| Danio rerio cDNA clone MGC:66161 IMAGE:5600170, complete cds Length = 998 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 94 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 153 Query: 176 aaggc 180 ||||| Sbjct: 154 aaggc 158
>emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome subunit prc1 Length = 976 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 576 cacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaa 635 ||||||||||||||||| || | ||||| || |||||| | ||||| ||||||||||| Sbjct: 484 cacaaggcaactagtgctggtatgaaggaacaagaagcagtcaatttcttggagaagaaa 543 Query: 636 atgaa 640 ||||| Sbjct: 544 atgaa 548 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 313 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 372 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 373 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 432 Query: 525 gagaa 529 ||||| Sbjct: 433 gagaa 437 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 233 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 142 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 183
>gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 777 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 576 cacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaa 635 ||||||||||||||||| || | ||||| || |||||| | ||||| ||||||||||| Sbjct: 487 cacaaggcaactagtgctggtatgaaggaacaagaagcagtcaatttcttggagaagaaa 546 Query: 636 atgaa 640 ||||| Sbjct: 547 atgaa 551 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 316 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 375 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 376 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 435 Query: 525 gagaa 529 ||||| Sbjct: 436 gagaa 440
>gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 1008 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 576 cacaaggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaa 635 ||||||||||||||||| || | ||||| || |||||| | ||||| ||||||||||| Sbjct: 536 cacaaggcaactagtgctggtatgaaggaacaagaagcagtcaatttcttggagaagaaa 595 Query: 636 atgaa 640 ||||| Sbjct: 596 atgaa 600 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 525 gagaa 529 ||||| Sbjct: 485 gagaa 489
>gb|AF354750.1|AF354750 Danio rerio proteasome subunit alpha Type 6-A (psma6a) mRNA, complete cds Length = 896 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 176 aaggc 180 ||||| Sbjct: 88 aaggc 92
>ref|NM_153655.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6a (psma6a), mRNA Length = 896 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 175 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 176 aaggc 180 ||||| Sbjct: 88 aaggc 92
>gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subunit PAA1 (PAA1) mRNA, complete cds Length = 1029 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 405 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 464 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 370 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtttac 429 Query: 465 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 524 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 430 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 489 Query: 525 gagaa 529 ||||| Sbjct: 490 gagaa 494 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 233 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 274 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 199 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 240
>emb|BX067162.1|CNS09NZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50CH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 865 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 806 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 805 agtatgccttcaaggc 790
>emb|BX052051.1|CNS09CBR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 739 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 680 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 679 agtatgccttcaaggc 664
>emb|BX046179.1|CNS097SN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC2CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 929 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 864 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 805 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 804 agtatgccttcaaggc 789
>emb|BX043736.1|CNS095WS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 809 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 750 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 749 agtatgccttcaaggc 734
>emb|BX032519.1|CNS08X97 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48BG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 868 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 153 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 212 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 213 agtatgccttcaaggc 228
>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence Length = 40961 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccgga 144 ||||||| | ||| || ||||||||||||||||||||||| Sbjct: 35517 gcgccggattcgatcgtcacatcaccatcttctccccgga 35556
>ref|XM_318387.2| Anopheles gambiae str. PEST ENSANGP00000015960 (ENSANGG00000013471), mRNA Length = 1017 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 105 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 159 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 218 Query: 165 agtacgcgttcaaggc 180 |||| || |||||||| Sbjct: 219 agtatgccttcaaggc 234
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Plus Query: 125 atcaccatcttctccccggagggccgcctctaccaagtcgagtacgcg 172 |||||||||||||| ||||| || ||||| || || |||||||||||| Sbjct: 1804305 atcaccatcttctctccggacggtcgcctgtatcaggtcgagtacgcg 1804352
>ref|XM_368091.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01153.4) partial mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 113 tacgaccgccacatcaccatcttctcc 139 |||||||| |||||||||||||||||| Sbjct: 19 tacgaccggcacatcaccatcttctcc 45
>emb|CR730790.2|CNS0GQTN Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/50 (88%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 165 ||||| || |||||||| || ||||||||| |||||||||||||||||| Sbjct: 28 gaccgacatatcaccatattttccccggag--ccgcctctaccaagtcga 75
>gb|AY232148.1| Drosophila yakuba clone yak-ad_ProsMA5 mRNA sequence Length = 555 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagtcgagtacgc 171 |||||| |||||||||||||||| |||||| || ||||| Sbjct: 42 cttctcgccggagggccgcctcttccaagtggaatacgc 80
>emb|BX036097.1|CNS0900L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 960 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 110 ggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtac 169 |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 863 ggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttgagtat 804 Query: 170 gcgttcaaggc 180 || |||||||| Sbjct: 803 gccttcaaggc 793
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 198 tcacctcgatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcc 257 |||| |||||||| |||||||| || || || || |||||||| || ||||||||||| | Sbjct: 18330 tcacatcgatcggtgtccgagggaaagattcagtatgcgtcgttacgcagaagaaagttc 18389 Query: 258 cgg 260 ||| Sbjct: 18390 cgg 18392 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 462 tacacgcagcatgcatacatgagaccccttggtgtag 498 ||||| || ||||| ||||||||||||||||| |||| Sbjct: 18813 tacacacaacatgcttacatgagaccccttggagtag 18849
>dbj|AK152915.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830091A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 946 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 78 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 124
>dbj|AK161662.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730455O07 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 928 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 58 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 104
>dbj|AK088143.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 925 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 57 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 103
>gb|AF060087.1|AF060087 Mus musculus proteasome subunit iota (Psma6) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 28 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 74
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 162 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 53573 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 53527
>ref|NM_114913.3| Arabidopsis thaliana CRK; ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protei> AT3G50530 (CRK) mRNA, complete cds Length = 2384 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 507 ctccggcgagatctccggcgac 528
>gb|DQ215433.1| Taeniopygia guttata clone 0058P0005A09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 933 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 93 Query: 171 cg 172 || Sbjct: 94 cg 95
>gb|DQ215432.1| Taeniopygia guttata clone 0058P0015B06 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 768 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 55 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 114 Query: 171 cg 172 || Sbjct: 115 cg 116
>gb|DQ215431.1| Taeniopygia guttata clone 0058P0056A11 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 48 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 107 Query: 171 cg 172 || Sbjct: 108 cg 109
>gb|DQ215430.1| Taeniopygia guttata clone 0058P0018G09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 61 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 120 Query: 171 cg 172 || Sbjct: 121 cg 122
>gb|DQ215302.1| Taeniopygia guttata clone 0058P0014F03 beta-globin mRNA-like mRNA, complete sequence Length = 616 Score = 44.1 bits (22), Expect = 0.56 Identities = 52/62 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 13 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 72 Query: 171 cg 172 || Sbjct: 73 cg 74
>gb|AY562224.1| Nicotiana tabacum calcium/calmodulin protein kinase gene, complete cds Length = 24561 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 9902 ctccggcgagatctccggcgac 9923
>gb|AF550608.1| Nicotiana tabacum calcium/calmodulin protein kinase 1 mRNA, complete cds Length = 4846 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 1643 ctccggcgagatctccggcgac 1664
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cttgcttgccaccggcctcaca 340 |||||||||||||||||||||| Sbjct: 223306 cttgcttgccaccggcctcaca 223327
>emb|Y09418.1|ATCRK A.thaliana mRNA for CDPK-related protein kinase Length = 2267 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 375 ctccggcgagatctccggcgac 396
>emb|X89429.1|PADNAGRIS Podospora anserina grisea gene, wild-type and copy of a long-lived mutant Length = 3417 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 caccagcatcacgcacctcttc 298 |||||||||||||||||||||| Sbjct: 1706 caccagcatcacgcacctcttc 1727
>emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, BAC clone T20E23 Length = 83513 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 44004 ctccggcgagatctccggcgac 44025
>gb|DQ397847.1| Cenarchaeum symbiosum clone C07F03, complete sequence Length = 42905 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 ccccggagggccgcctctacca 159 |||||||||||||||||||||| Sbjct: 20858 ccccggagggccgcctctacca 20879
>ref|NM_166221.2| Drosophila melanogaster Proteasome subunit CG10938-RA, transcript variant A (ProsMA5), mRNA Length = 884 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 118 cttctcgccggagggccgcctcttccaagt 147
>ref|NM_057854.3| Drosophila melanogaster Proteasome subunit CG10938-RB, transcript variant B (ProsMA5), mRNA Length = 885 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 114 cttctcgccggagggccgcctcttccaagt 143
>gb|AF435446.1|AF435446 Arabidopsis thaliana calcium/calmodulin-dependent protein kinase CaMK1 mRNA, complete cds Length = 2271 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctccggcgagatctccggcgac 80 |||||||||||||||||||||| Sbjct: 440 ctccggcgagatctccggcgac 461
>gb|AY061404.1| Drosophila melanogaster LD33318 full length cDNA Length = 888 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 109 cttctcgccggagggccgcctcttccaagt 138
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 127442 cttctcgccggagggccgcctcttccaagt 127471
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 4443 cttctcgccggagggccgcctcttccaagt 4472
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 147460 cttctcgccggagggccgcctcttccaagt 147489
>gb|U64721.1|DMU64721 Drosophila melanogaster 20S proteasome alpha subunit PSMA5 gene, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 cttctccccggagggccgcctctaccaagt 162 |||||| |||||||||||||||| |||||| Sbjct: 187 cttctcgccggagggccgcctcttccaagt 216
>gb|BC061438.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6, mRNA (cDNA clone MGC:76321 IMAGE:5380309), complete cds Length = 929 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 181 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 182 gtcaa 186 |||| Sbjct: 114 atcaa 118
>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence Length = 250903 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 aaggagcaggaagcaataaat 620 ||||||||||||||||||||| Sbjct: 125613 aaggagcaggaagcaataaat 125633
>emb|Z73908.1|CEF53B2 Caenorhabditis elegans Cosmid F53B2, complete sequence Length = 33478 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 attgcagacaaagcacaaata 461 ||||||||||||||||||||| Sbjct: 18174 attgcagacaaagcacaaata 18194
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence Length = 176815 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 aattttctggagaagaaaatg 638 ||||||||||||||||||||| Sbjct: 108294 aattttctggagaagaaaatg 108314
>emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in linkage group 17, complete sequence Length = 150656 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 116 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 164 ||||| |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 42431 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcg 42479
>ref|NM_069999.2| Caenorhabditis elegans F53B2.5 (F53B2.5) mRNA, complete cds Length = 1347 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 attgcagacaaagcacaaata 461 ||||||||||||||||||||| Sbjct: 536 attgcagacaaagcacaaata 516
>ref|NM_203782.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6 (MGC76321), mRNA Length = 929 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 181 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 182 gtcaa 186 |||| Sbjct: 114 atcaa 118
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18 Length = 41465 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 580 aggcaactagtgccggacttaaggagcaggaagcaataaattttctggagaagaaaatga 639 ||||||||||||| || | ||||| || |||||| | ||||| ||||||||||||||| Sbjct: 17290 aggcaactagtgctggtatgaaggaacaagaagcagtcaatttcttggagaagaaaatga 17231 Query: 640 a 640 | Sbjct: 17230 a 17230 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 462 tacacgcagcatgcatacatgagaccccttgg 493 ||||| || ||||| ||||||||||||||||| Sbjct: 18295 tacactcaacatgcttacatgagaccccttgg 18264
>gb|AY103887.1| Zea mays PCO095017 mRNA sequence Length = 1119 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 111 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 170 ||||||||||| ||||||| | |||||||| || |||| ||||| ||| || ||||||| Sbjct: 119 gctacgaccgcgccatcaccgttttctcccccgacggccacctcttccaggtggagtacg 178 Query: 171 c 171 | Sbjct: 179 c 179
>emb|CR761245.2| Xenopus tropicalis finished cDNA, clone TEgg062p03 Length = 897 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 122 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 181 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 47 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 106 Query: 182 gtcaa 186 |||| Sbjct: 107 atcaa 111
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tgtagttgctatggtcctgg 513 |||||||||||||||||||| Sbjct: 70434 tgtagttgctatggtcctgg 70415
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 agacaaagcacaaatataca 465 |||||||||||||||||||| Sbjct: 77154 agacaaagcacaaatataca 77135
>gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chromosome 7, complete sequence Length = 151213 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 83619 tttctggagaagaaaatgaa 83638
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 atgaggagaaaaatgctcag 539 |||||||||||||||||||| Sbjct: 63234 atgaggagaaaaatgctcag 63215
>gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromosome 7, complete sequence Length = 231124 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 56306 tttctggagaagaaaatgaa 56287
>gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, complete sequence Length = 139947 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 59645 tttctggagaagaaaatgaa 59626
>gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete sequence Length = 93904 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 7839 tttctggagaagaaaatgaa 7858
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 agacaaagcacaaatataca 465 |||||||||||||||||||| Sbjct: 4663 agacaaagcacaaatataca 4644
>emb|BX072128.1|CNS09RTG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 955 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 149 cgcctctaccaagtcgagtacgcgttcaaggc 180 |||||||||||||| ||||| || |||||||| Sbjct: 188 cgcctctaccaagttgagtatgccttcaaggc 219
>emb|Z72548.1|SCYGL026C S.cerevisiae chromosome VII reading frame ORF YGL026c Length = 2620 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 tggtctcccaagcaagaaatgaag 381 ||||||||||||| |||||||||| Sbjct: 2139 tggtctcccaagctagaaatgaag 2116
>emb|V01343.1|SCTRP5B Part of the yeast gene for tryptophan synthetase. A copy of the insertion element IS2 is inserted after cloning in E.coli by duplicating a 5 base pair sequence. This is the wildtype TRP5 gene before insertion of IS2 Length = 798 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tggtctcccaagcaagaaatgaag 381 ||||||||||||| |||||||||| Sbjct: 534 tggtctcccaagctagaaatgaag 557
>emb|V01342.1|SCTRP5A Yeast gene (trp5) for tryptophan synthetase Length = 2992 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tggtctcccaagcaagaaatgaag 381 ||||||||||||| |||||||||| Sbjct: 752 tggtctcccaagctagaaatgaag 775
>gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chromosome unknown, complete sequence Length = 146184 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 143872 tttctggagaagaaaatgaa 143853
>gb|AC091151.11| Homo sapiens chromosome 18, clone RP11-749H17, complete sequence Length = 170085 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 aggtcccttggtctcccaag 369 |||||||||||||||||||| Sbjct: 109027 aggtcccttggtctcccaag 109008
>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds Length = 220803 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tttctggagaagaaaatgaa 640 |||||||||||||||||||| Sbjct: 137962 tttctggagaagaaaatgaa 137943
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 cggctacgaccgccacatcaccatcttc 136 |||||||| |||| |||||||||||||| Sbjct: 142355 cggctacgcccgctacatcaccatcttc 142328
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccacatcaccatcttctcc 139 |||||||||||||||||||| Sbjct: 5473678 gccacatcaccatcttctcc 5473659
>gb|AC017088.8| Homo sapiens BAC clone RP11-496P1 from 2, complete sequence Length = 200440 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 caccacccaggcccagctcc 62 |||||||||||||||||||| Sbjct: 87687 caccacccaggcccagctcc 87668
>gb|AC092598.2| Homo sapiens BAC clone RP11-114B11 from 2, complete sequence Length = 164798 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 cttaaggagcaggaagcaat 616 |||||||||||||||||||| Sbjct: 40358 cttaaggagcaggaagcaat 40377
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 atgaggagaaaaatgctcag 539 |||||||||||||||||||| Sbjct: 62509 atgaggagaaaaatgctcag 62490
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 tgtagttgctatggtcctgg 513 |||||||||||||||||||| Sbjct: 24165 tgtagttgctatggtcctgg 24184
>gb|DQ331977.1| Synthetic construct Saccharomyces cerevisiae clone FLH202464.01X TRP5 gene, complete sequence Length = 2124 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tggtctcccaagcaagaaatgaag 381 ||||||||||||| |||||||||| Sbjct: 254 tggtctcccaagctagaaatgaag 277
>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence Length = 185272 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 cttctttggacacaaggcaa 585 |||||||||||||||||||| Sbjct: 100137 cttctttggacacaaggcaa 100118
>gb|U27311.1|SAU27311 Stigmatella aurantiaca RNA polymerase sigma C subunit (sigC) gene, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gcaccacccaggcccagctccggc 65 |||||||||||||||||| ||||| Sbjct: 455 gcaccacccaggcccagcgccggc 478
>gb|J02562.1|SYNTRIS22 yeast (s.cerevisiae) trp5 gene and chimeric is2 element: 3'end Length = 709 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 tggtctcccaagcaagaaatgaag 381 ||||||||||||| |||||||||| Sbjct: 445 tggtctcccaagctagaaatgaag 468 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,254,491 Number of Sequences: 3902068 Number of extensions: 5254491 Number of successful extensions: 110460 Number of sequences better than 10.0: 186 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109877 Number of HSP's gapped (non-prelim): 567 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
