ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20d11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E20, full insert sequence Length = 1413 Score = 757 bits (382), Expect = 0.0 Identities = 561/620 (90%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 221 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 280 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 281 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 340 Query: 124 acagctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccatt 183 || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 341 accgctcttcttggggatgtccctagtgtcgatgtcaagaagaatgttattgtagccatt 400 Query: 184 acatctgataagggtctctgtggtggtatcaattctacatctgttaaagtcagcaaagca 243 || ||||| |||||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 401 acctctgacaagggtctttgtggtggtatcaactcaacgtcagttaaagtcagcaaagca 460 Query: 244 ctccagaagatgacttctggtccagagaaagaaagcaagtatgtcatattaggagaaaag 303 ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 461 ctccacaagttgacttctggaccagagaaagaaagcaagtatgtcatattaggagaaaag 520 Query: 304 gggaaagttcaactcatccgtgactccaggaagcatattgaaatgacagtatctgagttg 363 || |||||||||||||| |||||||||| | | | || || |||||||||||||||||| Sbjct: 521 ggtaaagttcaactcattcgtgactccaaggataacatcgagatgacagtatctgagttg 580 Query: 364 cagaagaaccctattaactacacacaggttgctgtgctcgcagatgatatcttgaaaaat 423 |||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 581 cagaagaaccctatcaactacacacagattgctgtgctggcagatgatatcttgaaaaat 640 Query: 424 gttgaatatgatgctataagagttgtttttaacaagtttcagtctgtcatttcatttagg 483 ||||| ||||||||| |||| ||||||||||||||||| || || ||||| ||||| | | Sbjct: 641 gttgagtatgatgctctaagggttgtttttaacaagttccactcggtcatatcattcaag 700 Query: 484 cctacattggccacaatactgtccccagaggttatggagaaagaatcggaatctggtggg 543 || ||| || | || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 701 cccacaatgacaaccatactttccccagaggttatggagaaagaatcggaatctggt--- 757 Query: 544 aaggttggtgagctggattcgtatgaaattgaaggaggtgaaacaaaatcagaaatcctg 603 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 758 aaggttggtgacctggattcatatgaaattgaaggaggtgaaactaaatcagaaattctt 817 Query: 604 cagaatcttaccgagttcca 623 |||||||||||||||||||| Sbjct: 818 cagaatcttaccgagttcca 837
>ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative ATP synthase gamma chain, mitochondrial precursor (OSJNBa0053D03.10), mRNA Length = 1107 Score = 500 bits (252), Expect = e-138 Identities = 354/388 (91%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 193 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 252 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 253 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 312 Query: 124 acagctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccatt 183 || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 313 accgctcttcttggggatgtccctagtgtcgatgtcaagaagaatgttattgtagccatt 372 Query: 184 acatctgataagggtctctgtggtggtatcaattctacatctgttaaagtcagcaaagca 243 || ||||| |||||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 373 acctctgacaagggtctttgtggtggtatcaactcaacgtcagttaaagtcagcaaagca 432 Query: 244 ctccagaagatgacttctggtccagagaaagaaagcaagtatgtcatattaggagaaaag 303 ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ctccacaagttgacttctggaccagagaaagaaagcaagtatgtcatattaggagaaaag 492 Query: 304 gggaaagttcaactcatccgtgactccaggaagcatattgaaatgacagtatctgagttg 363 || |||||||||||||| |||||||||| | | | || || |||||||||||||||||| Sbjct: 493 ggtaaagttcaactcattcgtgactccaaggataacatcgagatgacagtatctgagttg 552 Query: 364 cagaagaaccctattaactacacacagg 391 |||||||||||||| ||||||||||||| Sbjct: 553 cagaagaaccctatcaactacacacagg 580 Score = 266 bits (134), Expect = 8e-68 Identities = 208/232 (89%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 392 ttgctgtgctcgcagatgatatcttgaaaaatgttgaatatgatgctataagagttgttt 451 |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 677 ttgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgttt 736 Query: 452 ttaacaagtttcagtctgtcatttcatttaggcctacattggccacaatactgtccccag 511 |||||||||| || || ||||| ||||| | ||| ||| || | || ||||| ||||||| Sbjct: 737 ttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccag 796 Query: 512 aggttatggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaa 571 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 797 aggttatggagaaagaatcggaatctggt---aaggttggtgacctggattcatatgaaa 853 Query: 572 ttgaaggaggtgaaacaaaatcagaaatcctgcagaatcttaccgagttcca 623 |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 854 ttgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttcca 905
>gb|AY108441.1| Zea mays PCO083558 mRNA sequence Length = 1514 Score = 398 bits (201), Expect = e-108 Identities = 504/605 (83%) Strand = Plus / Plus Query: 7 atgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatca 66 ||||| ||||||| ||| ||||| ||||| || || || ||||||||||||||||||||| Sbjct: 251 atgaagagtgtcaggaatatccagaagatcacaaaggctatgaagatggttgcagcatca 310 Query: 67 aagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattcaca 126 ||||| || || ||||| ||||| ||||| ||||||||||| | ||||| || ||||| Sbjct: 311 aagctccgggcagttcagacaaggactgaaaattcacgtggcttgtggcaaccgttcacc 370 Query: 127 gctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccattaca 186 || ||||||||||||||||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 371 gcccttcttggggatgctcctagtgttgacgtcaagaagaatgtgattgtggccattacc 430 Query: 187 tctgataagggtctctgtggtggtatcaattctacatctgttaaagtcagcaaagcactc 246 ||||||||||| |||||||||||||| ||||| ||||| || ||||| |||| || || Sbjct: 431 tctgataagggactctgtggtggtattaattcaacatcagtgaaagttagcagggccctt 490 Query: 247 cagaagatgacttctggtccagagaaagaaagcaagtatgtcatattaggagaaaagggg 306 || || |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||| Sbjct: 491 cacaaattgacatctggtccagaaaaagaaaccaagtatgttatattaggagaaaagggc 550 Query: 307 aaagttcaactcatccgtgactccaggaagcatattgaaatgacagtatctgagttgcag 366 |||||||| || | |||||||| | | | ||||||||||| | | |||| ||||| Sbjct: 551 aaagttcagctgttgcgtgactcaaaggacagcattgaaatgactgcaactgaactgcag 610 Query: 367 aagaaccctattaactacacacaggttgctgtgctcgcagatgatatcttgaaaaatgtt 426 ||||||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 611 aagaaccctatcaactacacacaggttgccgtgctcgcggatgacatattgaaaaatgtg 670 Query: 427 gaatatgatgctataagagttgtttttaacaagtttcagtctgtcatttcatttaggcct 486 |||||||||||| | || ||| |||| |||||||| || |||||||| || |||| ||| Sbjct: 671 gaatatgatgctctgagggttattttcaacaagttccaatctgtcatatcgtttaagccc 730 Query: 487 acattggccacaatactgtccccagaggttatggagaaagaatcggaatctggtgggaag 546 ||| ||| |||||||| ||||| |||||| || |||||||| ||| ||||||||||| Sbjct: 731 acaatggtaacaatactttcccccgaggttgcagaaaaagaatcagaagctggtgggaag 790 Query: 547 gttggtgagctggattcgtatgaaattgaaggaggtgaaacaaaatcagaaatcctgcag 606 | ||||| || ||||| ||||| |||||||| || || ||||||||||| || ||||| Sbjct: 791 atgggtgacctagattcttatgagattgaaggcggcgagacaaaatcagagattttgcag 850 Query: 607 aatct 611 ||||| Sbjct: 851 aatct 855
>gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence Length = 1345 Score = 353 bits (178), Expect = 4e-94 Identities = 487/590 (82%) Strand = Plus / Plus Query: 7 atgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatca 66 ||||| ||| |||| |||||||| ||||| || || || ||||||||||||||||||||| Sbjct: 223 atgaagagtatcaaaaacatccagaagatcacaaaggctatgaagatggttgcagcatca 282 Query: 67 aagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattcaca 126 |||||||| |||||||| || || ||||| |||||||| || | |||||||| ||||| Sbjct: 283 aagcttcgggctgttcagacgaggactgaaaattcacgcggcttgtggcagccgttcacc 342 Query: 127 gctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccattaca 186 || ||||||||||| |||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 343 gcccttcttggggacactcctagtgttgacgtcaagaagaatgtgattgtggccattacc 402 Query: 187 tctgataagggtctctgtggtggtatcaattctacatctgttaaagtcagcaaagcactc 246 ||||||||||| |||||||||||||||||||| || || || ||||| |||| || || Sbjct: 403 tctgataagggactctgtggtggtatcaattcaacctcggtgaaagttagcagggccctt 462 Query: 247 cagaagatgacttctggtccagagaaagaaagcaagtatgtcatattaggagaaaagggg 306 || || |||| ||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 463 cacaaactgacatctggtccagaaaaagaaagcaagtatgttatattaggagaaaaaggc 522 Query: 307 aaagttcaactcatccgtgactccaggaagcatattgaaatgacagtatctgagttgcag 366 |||||||| || | |||||||| | ||| ||||||||||| | | ||| | ||| Sbjct: 523 aaagttcagctgttgcgtgactcgaagaacagcattgaaatgaccgcaagtgaactacag 582 Query: 367 aagaaccctattaactacacacaggttgctgtgctcgcagatgatatcttgaaaaatgtt 426 ||||||||||| ||||| |||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 583 aagaaccctatcaactatacacagattgctgtgctcgcggatgacatattgaaaaatgtg 642 Query: 427 gaatatgatgctataagagttgtttttaacaagtttcagtctgtcatttcatttaggcct 486 |||||||||||| |||| ||| |||| |||||||| || |||||||| || |||| ||| Sbjct: 643 gaatatgatgctctaagggttattttcaacaagttccattctgtcatatcgtttaagccc 702 Query: 487 acattggccacaatactgtccccagaggttatggagaaagaatcggaatctggtgggaag 546 ||| ||| || ||||||||||| |||||| || |||||| | ||| ||||||||||| Sbjct: 703 acaatggtaacgatactgtcccctgaggttgcagaaaaagaagcagaagctggtgggaag 762 Query: 547 gttggtgagctggattcgtatgaaattgaaggaggtgaaacaaaatcaga 596 ||||| || |||| ||||| |||||||| ||||| |||||| |||| Sbjct: 763 acgggtgacctaaattcttatgagattgaaggcggtgagacaaaagcaga 812
>emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transporting ATP synthase (xd1 gene) Length = 599 Score = 333 bits (168), Expect = 4e-88 Identities = 251/278 (90%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 346 atgacagtatctgagttgcagaagaaccctattaactacacacaggttgctgtgctcgca 405 ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||| Sbjct: 13 atgacagtatctgagttgcagaagagccctatcaactacacacagattgctgtgctggca 72 Query: 406 gatgatatcttgaaaaatgttgaatatgatgctataagagttgtttttaacaagtttcag 465 ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| || Sbjct: 73 gatgatatcttgaaaaatgttgagtatgatgctctaagggttgtttttaacaagttccac 132 Query: 466 tctgtcatttcatttaggcctacattggccacaatactgtccccagaggttatggagaaa 525 || ||||| ||||| | ||| ||| || | || ||||| ||||||||||||||||||||| Sbjct: 133 tcggtcatatcattcaagcccacaatgacaaccatactttccccagaggttatggagaaa 192 Query: 526 gaatcggaatctggtgggaaggttggtgagctggattcgtatgaaattgaaggaggtgaa 585 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 193 gaatcggaatctggt---aaggttggtgacctggattcatatgaaattgaaggaggtgaa 249 Query: 586 acaaaatcagaaatcctgcagaatcttaccgagttcca 623 || ||||||||||| || |||||||||||||||||||| Sbjct: 250 actaaatcagaaattcttcagaatcttaccgagttcca 287
>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0053D03, complete sequence Length = 150496 Score = 196 bits (99), Expect = 6e-47 Identities = 129/139 (92%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 20242 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 20301 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 20302 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 20361 Query: 124 acagctcttcttggggatg 142 || |||||||||||||||| Sbjct: 20362 accgctcttcttggggatg 20380 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Plus Query: 265 ccagagaaagaaagcaagtatgtcatattaggagaaaaggggaaagttcaactcatccgt 324 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 21173 ccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgt 21232 Query: 325 gactccaggaagcatattgaaatgacagtatctgagttgcagaagaaccctattaactac 384 ||||||| | | | || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 21233 gactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactac 21292 Query: 385 acacaggt 392 |||||||| Sbjct: 21293 acacaggt 21300 Score = 155 bits (78), Expect = 2e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 512 aggttatggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaa 571 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 23214 aggttatggagaaagaatcggaatctggt---aaggttggtgacctggattcatatgaaa 23270 Query: 572 ttgaaggaggtgaaacaaaatcagaaatcctgcagaatcttaccgagttcca 623 |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 23271 ttgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttcca 23322 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 155 atgtcaagaagaatgttattgtagccattacatctgataagggtctctgtggtggtatca 214 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 20984 atgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatca 21043 Query: 215 attctacatctgttaaagtcagcaaagcactccagaagatgacttctggt 264 | || || || ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 21044 actcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggt 21093 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 392 ttgctgtgctcgcagatgatatcttgaaaaatgttgaatatgatgctataagagttgttt 451 |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 23002 ttgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgttt 23061 Query: 452 ttaacaagtttcagtctgtcatttcatttaggcctacattggccacaatactgtccccag 511 |||||||||| || || ||||| ||||| | ||| ||| || | || ||||| ||||||| Sbjct: 23062 ttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccag 23121 Query: 512 aggt 515 |||| Sbjct: 23122 aggt 23125
>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0053D03, from chromosome 10, complete sequence Length = 199113 Score = 196 bits (99), Expect = 6e-47 Identities = 129/139 (92%) Strand = Plus / Minus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 39759 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 39700 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 39699 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 39640 Query: 124 acagctcttcttggggatg 142 || |||||||||||||||| Sbjct: 39639 accgctcttcttggggatg 39621 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Minus Query: 265 ccagagaaagaaagcaagtatgtcatattaggagaaaaggggaaagttcaactcatccgt 324 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 38828 ccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgt 38769 Query: 325 gactccaggaagcatattgaaatgacagtatctgagttgcagaagaaccctattaactac 384 ||||||| | | | || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 38768 gactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactac 38709 Query: 385 acacaggt 392 |||||||| Sbjct: 38708 acacaggt 38701 Score = 155 bits (78), Expect = 2e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Minus Query: 512 aggttatggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaa 571 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 36787 aggttatggagaaagaatcggaatctggt---aaggttggtgacctggattcatatgaaa 36731 Query: 572 ttgaaggaggtgaaacaaaatcagaaatcctgcagaatcttaccgagttcca 623 |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 36730 ttgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttcca 36679 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Minus Query: 155 atgtcaagaagaatgttattgtagccattacatctgataagggtctctgtggtggtatca 214 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 39017 atgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatca 38958 Query: 215 attctacatctgttaaagtcagcaaagcactccagaagatgacttctggt 264 | || || || ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 38957 actcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggt 38908 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Minus Query: 392 ttgctgtgctcgcagatgatatcttgaaaaatgttgaatatgatgctataagagttgttt 451 |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 36999 ttgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgttt 36940 Query: 452 ttaacaagtttcagtctgtcatttcatttaggcctacattggccacaatactgtccccag 511 |||||||||| || || ||||| ||||| | ||| ||| || | || ||||| ||||||| Sbjct: 36939 ttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccag 36880 Query: 512 aggt 515 |||| Sbjct: 36879 aggt 36876
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 196 bits (99), Expect = 6e-47 Identities = 129/139 (92%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 8216720 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 8216779 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 8216780 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 8216839 Query: 124 acagctcttcttggggatg 142 || |||||||||||||||| Sbjct: 8216840 accgctcttcttggggatg 8216858 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Plus Query: 265 ccagagaaagaaagcaagtatgtcatattaggagaaaaggggaaagttcaactcatccgt 324 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 8217651 ccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgt 8217710 Query: 325 gactccaggaagcatattgaaatgacagtatctgagttgcagaagaaccctattaactac 384 ||||||| | | | || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 8217711 gactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactac 8217770 Query: 385 acacaggt 392 |||||||| Sbjct: 8217771 acacaggt 8217778 Score = 155 bits (78), Expect = 2e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 512 aggttatggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaa 571 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 8219692 aggttatggagaaagaatcggaatctggt---aaggttggtgacctggattcatatgaaa 8219748 Query: 572 ttgaaggaggtgaaacaaaatcagaaatcctgcagaatcttaccgagttcca 623 |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 8219749 ttgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttcca 8219800 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 155 atgtcaagaagaatgttattgtagccattacatctgataagggtctctgtggtggtatca 214 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 8217462 atgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatca 8217521 Query: 215 attctacatctgttaaagtcagcaaagcactccagaagatgacttctggt 264 | || || || ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 8217522 actcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggt 8217571 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 392 ttgctgtgctcgcagatgatatcttgaaaaatgttgaatatgatgctataagagttgttt 451 |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 8219480 ttgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgttt 8219539 Query: 452 ttaacaagtttcagtctgtcatttcatttaggcctacattggccacaatactgtccccag 511 |||||||||| || || ||||| ||||| | ||| ||| || | || ||||| ||||||| Sbjct: 8219540 ttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccag 8219599 Query: 512 aggt 515 |||| Sbjct: 8219600 aggt 8219603
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 196 bits (99), Expect = 6e-47 Identities = 129/139 (92%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 8221819 cgcatgaagagtgttaggaacatccagaagattacaaaagcaatgaagatggttgcagca 8221878 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattc 123 ||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 8221879 tcaaagcttcgagctgttcaaataagaacagaaaattcacgtggtctatggcagccattc 8221938 Query: 124 acagctcttcttggggatg 142 || |||||||||||||||| Sbjct: 8221939 accgctcttcttggggatg 8221957 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Plus Query: 265 ccagagaaagaaagcaagtatgtcatattaggagaaaaggggaaagttcaactcatccgt 324 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 8222750 ccagagaaagaaagcaagtatgtcatattaggagaaaagggtaaagttcaactcattcgt 8222809 Query: 325 gactccaggaagcatattgaaatgacagtatctgagttgcagaagaaccctattaactac 384 ||||||| | | | || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 8222810 gactccaaggataacatcgagatgacagtatctgagttgcagaagaaccctatcaactac 8222869 Query: 385 acacaggt 392 |||||||| Sbjct: 8222870 acacaggt 8222877 Score = 155 bits (78), Expect = 2e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 512 aggttatggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaa 571 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 8224791 aggttatggagaaagaatcggaatctggt---aaggttggtgacctggattcatatgaaa 8224847 Query: 572 ttgaaggaggtgaaacaaaatcagaaatcctgcagaatcttaccgagttcca 623 |||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 8224848 ttgaaggaggtgaaactaaatcagaaattcttcagaatcttaccgagttcca 8224899 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 155 atgtcaagaagaatgttattgtagccattacatctgataagggtctctgtggtggtatca 214 ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 8222561 atgtcaagaagaatgttattgtagccattacctctgacaagggtctttgtggtggtatca 8222620 Query: 215 attctacatctgttaaagtcagcaaagcactccagaagatgacttctggt 264 | || || || ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 8222621 actcaacgtcagttaaagtcagcaaagcactccacaagttgacttctggt 8222670 Score = 119 bits (60), Expect = 1e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 392 ttgctgtgctcgcagatgatatcttgaaaaatgttgaatatgatgctataagagttgttt 451 |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 8224579 ttgctgtgctggcagatgatatcttgaaaaatgttgagtatgatgctctaagggttgttt 8224638 Query: 452 ttaacaagtttcagtctgtcatttcatttaggcctacattggccacaatactgtccccag 511 |||||||||| || || ||||| ||||| | ||| ||| || | || ||||| ||||||| Sbjct: 8224639 ttaacaagttccactcggtcatatcattcaagcccacaatgacaaccatactttccccag 8224698 Query: 512 aggt 515 |||| Sbjct: 8224699 aggt 8224702
>dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gamma subunit, complete cds Length = 1412 Score = 121 bits (61), Expect = 3e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 7 atgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatca 66 ||||| ||||| || ||||| ||||| || || || |||||||||||||||||||| || Sbjct: 240 atgaagagtgttaaaaacattcaaaaaatcacaaaggcaatgaagatggttgcagcttct 299 Query: 67 aagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattcaca 126 |||||||| ||| |||| || |||||||| ||||||||||| || |||||||||||||| Sbjct: 300 aagcttcgagctattcagactagaactgaaaattcacgtggcctctggcagccattcact 359 Query: 127 gctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccattaca 186 ||||| ||||| || |||| ||||| |||| ||||||||||| || | | ||| | Sbjct: 360 gctctccttggtgacactccaagtgttgatgtaaagaagaatgtcatcattactatttct 419 Query: 187 tctgataagggtctctgtggtggtatcaattctacatctgt 227 || || || ||||| |||||||| || |||||||||||||| Sbjct: 420 tcagacaaaggtctttgtggtggaattaattctacatctgt 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 356 ctgagttgcagaagaaccctattaactacacacaggttgctgtgctcgcagatgatatct 415 |||||||||||||||| ||| | ||||| || ||||| | ||| | || ||||| ||| Sbjct: 589 ctgagttgcagaagaatcctctcaactatactcaggtctcagtggttgctgatgacatcc 648 Query: 416 tgaaaaatgttgaatatgatgctataagagttgtttttaacaagtttcagtc 467 | |||||||| || | ||||||| ||||| ||||||| |||||||| ||||| Sbjct: 649 ttaaaaatgtagagtttgatgctctaagaattgttttcaacaagttccagtc 700 Score = 44.1 bits (22), Expect = 0.54 Identities = 76/94 (80%) Strand = Plus / Plus Query: 518 tggagaaagaatcggaatctggtgggaaggttggtgagctggattcgtatgaaattgaag 577 |||||| |||||| |||||||| || ||| | || || ||||||| ||||||||||||| Sbjct: 751 tggagagagaatctgaatctgggggaaagctcggcgatttggattcttatgaaattgaag 810 Query: 578 gaggtgaaacaaaatcagaaatcctgcagaatct 611 | | ||| |||| |||||| | || |||||||| Sbjct: 811 gtgctgagtcaaagtcagaagtacttcagaatct 844
>dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma subunit, complete cds Length = 1389 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 7 atgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatca 66 ||||| ||||| || ||||| ||||| || || || |||||||||||||||||||| || Sbjct: 241 atgaagagtgttaaaaacattcaaaaaatcacaaaggcaatgaagatggttgcagcttct 300 Query: 67 aagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccattcaca 126 |||||||| ||| |||| || ||| |||| ||||||||||| || |||||||||||||| Sbjct: 301 aagcttcgagctattcagactagagctgaaaattcacgtggcctctggcagccattcact 360 Query: 127 gctcttcttggggatgctcctagtgtaaatgtcaagaagaatgttattgtagccattaca 186 ||||| ||||| || |||| ||||| |||| ||||||||||| || | | ||| | Sbjct: 361 gctctccttggtgacactccaagtgttgatgtaaagaagaatgtcatcattactatttct 420 Query: 187 tctgataagggtctctgtggtggtatcaattctacatctgt 227 || || || ||||| |||||||| || |||||||||||||| Sbjct: 421 tcagacaaaggtctttgtggtggaattaattctacatctgt 461 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 356 ctgagttgcagaagaaccctattaactacacacaggttgctgtgctcgcagatgatatct 415 |||||||||||||||| ||| | ||||| || ||||| | ||| | || ||||| ||| Sbjct: 590 ctgagttgcagaagaatcctctcaactatactcaggtctcagtggttgctgatgacatcc 649 Query: 416 tgaaaaatgttgaatatgatgctataagagttgtttttaacaagtttcagtctgtcattt 475 | |||||||| || | ||||||| ||||| ||||||| |||||||| ||||| || | | Sbjct: 650 ttaaaaatgtagagtttgatgctctaagaattgttttcaacaagttccagtcagttgtct 709 Query: 476 catttaggcctacattggccacaatactgtccccagaggttatggagaaagaatcggaat 535 ||||| ||| || || | || || | || || |||||| |||||| |||||| |||| Sbjct: 710 catttgtgccaaccatgtctactgtattatcacctgaggttgtggagagagaatctgaat 769 Query: 536 ctggtgggaaggttggtgagctggattcgtatgaaattgaaggaggtgaaacaaaatcag 595 |||| || ||| |||| || ||||||| |||||||||||||| | ||| |||| |||| Sbjct: 770 ctgggggaaagcttggcgatttggattcttatgaaattgaaggtgctgagtcaaagtcag 829 Query: 596 aaatcctgcagaatct 611 || |||| |||||||| Sbjct: 830 aagtccttcagaatct 845
>ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT2G33040 mRNA, complete cds Length = 1309 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 284 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 343 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 344 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 402 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 467 tctgacaagggtctctgtggtggaatcaa 495
>gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, partial cds Length = 1083 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 46 atgaagatggttgcagcatcaaagcttcgtgctgttcaaacaagaactgagaattcacgt 105 |||||||||||||| || |||||| | | || |||||||| | | |||||||||| || Sbjct: 30 atgaagatggttgctgcctcaaagttgagagcagttcaaactaaagctgagaattcccga 89 Query: 106 ggtctatggcagccattcacagctcttcttggggatgctcctagtgtaaatgtcaagaag 165 || || ||||||||||| || | |||||||| ||| ||| ||||| ||||||||||| Sbjct: 90 ggcctctggcagccatttacttcacttcttggtgatcttcccagtgttgatgtcaagaag 149 Query: 166 aatgttattgtagccattacatctgataagggtctctgtggtggtatcaattctacatc 224 || ||| ||||| |||| | ||||| || |||||||||||||| || || |||||||| Sbjct: 150 aacgttgttgtaaccatctcttctgacaaaggtctctgtggtggaattaactctacatc 208
>gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) (At2g33040) mRNA, complete cds Length = 1092 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 151 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 210 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 211 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 269 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 334 tctgacaagggtctctgtggtggaatcaa 362
>gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) (At2g33040) mRNA, complete cds Length = 1265 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 239 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 298 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 299 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 357 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 422 tctgacaagggtctctgtggtggaatcaa 450
>gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds Length = 978 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 151 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 210 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 211 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 269 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 334 tctgacaagggtctctgtggtggaatcaa 362
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete sequence Length = 96801 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 3101 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 3160 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 3161 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 3219 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 3482 tctgacaagggtctctgtggtggaatcaa 3510
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 80075 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 80134 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 80135 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 80193 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 80457 tctgacaagggtctctgtggtggaatcaa 80485
>gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) (At2g33040; F25I18.22) mRNA, complete cds Length = 1360 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 250 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 309 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 310 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 368 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 433 tctgacaagggtctctgtggtggaatcaa 461
>gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds Length = 1238 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 237 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 296 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 297 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 355 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 420 tctgacaagggtctctgtggtggaatcaa 448
>emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1205 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 254 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 313 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 314 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 372 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 437 tctgacaagggtctctgtggtggaatcaa 465
>gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete sequence Length = 1310 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 284 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 343 Query: 64 tcaaagcttcgtgctgttcaaacaagaactgagaattcacgtggtctatggcagccatt 122 || |||||| | || |||||| || ||||||| || ||||| || ||||||||||| Sbjct: 344 tccaagcttagagcagttcaaggccgagctgagaactcccgtggactttggcagccatt 402 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 467 tctgacaagggtctctgtggtggaatcaa 495
>gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chain mRNA, nuclear gene encoding mitochondrial protein, partial cds Length = 718 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 356 ctgagttgcagaagaaccctattaactacacacaggttgctgtgctcgcagatgatatct 415 ||||||||||||| || ||| ||||||| ||||||||| ||||| | |||||| | |||| Sbjct: 31 ctgagttgcagaaaaatcctcttaactatacacaggtttctgtgatggcagattacatct 90 Query: 416 tgaaaaatgttgaatatgatgc 437 |||| |||||||||| |||||| Sbjct: 91 tgaagaatgttgaatttgatgc 112
>dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mitochondrial F1-ATPase, complete cds Length = 1267 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgcagca 63 |||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 225 cgcatgaagagtgttaagaacatccaaaagatcacaaaggcaatgaagatggttgctgct 284 Query: 64 tcaaagctt 72 || |||||| Sbjct: 285 tccaagctt 293 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtatcaa 215 ||||| ||||||||||||||||| ||||| Sbjct: 408 tctgacaagggtctctgtggtggaatcaa 436
>ref|XM_760635.1| Theileria parva strain Muguga chromosome 1 ATP synthase F1 subunit gamma (TP01_0201) partial mRNA Length = 1165 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 31 aagattacgaaagcaatgaagatggttgcagcatcaaagctt 72 |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 365 aagattactaaggcaatgaagatggttgcagcctcaaagctt 406
>ref|XM_949424.1| Theileria annulata strain Ankara ATP synthase subunit gamma, mitochondrial precursor (TA19395) partial mRNA Length = 945 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 28 caaaagattacgaaagcaatgaagatggttgcagcatcaaa 68 ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 166 caaaagattactaaggcaatgaagatggttgcagcctcaaa 206
>gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete sequence Length = 188616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 16 gtcaagaacatccaaaagattacgaaagcaatgaagatggttgc 59 |||||||||||||||||||| || ||| | |||||||||||||| Sbjct: 11992 gtcaagaacatccaaaagatcaccaaatccatgaagatggttgc 12035
>ref|NM_182293.3| Caenorhabditis elegans Y69A2AR.18c (Y69A2AR.18) mRNA, complete cds Length = 981 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 16 gtcaagaacatccaaaagattacgaaagcaatgaagatggttgc 59 |||||||||||||||||||| || ||| | |||||||||||||| Sbjct: 116 gtcaagaacatccaaaagatcaccaaatccatgaagatggttgc 159
>ref|NM_067812.2| Caenorhabditis elegans Y69A2AR.18b (Y69A2AR.18) mRNA, complete cds Length = 949 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 16 gtcaagaacatccaaaagattacgaaagcaatgaagatggttgc 59 |||||||||||||||||||| || ||| | |||||||||||||| Sbjct: 119 gtcaagaacatccaaaagatcaccaaatccatgaagatggttgc 162
>ref|NM_067813.3| Caenorhabditis elegans Y69A2AR.18a (Y69A2AR.18) mRNA, complete cds Length = 1173 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 16 gtcaagaacatccaaaagattacgaaagcaatgaagatggttgc 59 |||||||||||||||||||| || ||| | |||||||||||||| Sbjct: 126 gtcaagaacatccaaaagatcaccaaatccatgaagatggttgc 169
>gb|BC068867.1| Xenopus laevis hypothetical protein MGC82276, mRNA (cDNA clone MGC:82276 IMAGE:4032562), complete cds Length = 1037 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagc 62 |||||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 120 tcaagaacatccaaaagattaccaagtctatgaagatggtggcagc 165
>dbj|AB042438.1| Cyprinus carpio mRNA for mitochondrial ATP synthase gamma-subunit, complete cds Length = 1119 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatcaaag 69 ||||||||||||| ||||| || ||| | |||||||||||| ||||| ||||| Sbjct: 126 tcaagaacatccagaagatcaccaaatccatgaagatggtttcagcagcaaag 178
>emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 4 cgcatgaaaagtgtcaagaacatccaaaagattacgaaagcaatgaagatggttgc 59 |||||||| ||||| ||| |||||||| |||| || || || |||||||||||||| Sbjct: 265 cgcatgaagagtgtgaaggacatccaagagatcacaaaggcgatgaagatggttgc 320
>emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12, complete sequence Length = 192457 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 405 agatgatatcttgaaaaatgttgaata 431 ||||||||| ||||||||||||||||| Sbjct: 31751 agatgatattttgaaaaatgttgaata 31725
>ref|XM_365071.1| Magnaporthe grisea 70-15 hypothetical protein (MG09916.4) partial mRNA Length = 909 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtat 212 ||||| |||||||||||||||||||| Sbjct: 310 tctgacaagggtctctgtggtggtat 335
>gb|BC072367.1| Xenopus laevis ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:84489 IMAGE:4740587), complete cds Length = 1053 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagc 62 |||| ||||||||||||||||| || | ||||||||||| ||||| Sbjct: 117 tcaaaaacatccaaaagattaccaagtctatgaagatggtggcagc 162
>gb|BC044680.1| Xenopus laevis ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:53337 IMAGE:5570913), complete cds Length = 1219 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagc 62 |||| ||||||||||||||||| || | ||||||||||| ||||| Sbjct: 306 tcaaaaacatccaaaagattactaagtctatgaagatggtggcagc 351
>ref|NM_001016407.2| Xenopus tropicalis ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (atp5c1), mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagc 62 |||| ||||||||||||||||| || | ||||||||||| ||||| Sbjct: 176 tcaaaaacatccaaaagattaccaagtctatgaagatggtggcagc 221
>gb|AY849677.1| Magnaporthe grisea ATP synthase gamma chain-like protein mRNA, complete cds Length = 1239 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 tctgataagggtctctgtggtggtat 212 ||||| |||||||||||||||||||| Sbjct: 436 tctgacaagggtctctgtggtggtat 461
>emb|CR761126.2| Xenopus tropicalis finished cDNA, clone TEgg061e20 Length = 1137 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagc 62 |||| ||||||||||||||||| || | ||||||||||| ||||| Sbjct: 176 tcaaaaacatccaaaagattaccaagtctatgaagatggtggcagc 221
>emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 in linkage group 19, complete sequence Length = 171079 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 405 agatgatatcttgaaaaatgttgaa 429 ||||||||| ||||||||||||||| Sbjct: 145221 agatgatattttgaaaaatgttgaa 145245
>emb|AL133417.11| Human DNA sequence from clone RP11-436D10 on chromosome 10 Contains part of a novel gene, a novel gene (FLJ14547), the EGR2 gene for early growth response 2 (Krox-20 homolog, Drosophila) and CpG islands, complete sequence Length = 77272 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 tattaggagaaaaggggaaag 310 ||||||||||||||||||||| Sbjct: 2459 tattaggagaaaaggggaaag 2479
>ref|XM_967628.1| PREDICTED: Tribolium castaneum similar to ATP synthase gamma chain, mitochondrial precursor (LOC661473), mRNA Length = 1094 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 16 gtcaagaacatccaaaagattacgaaagcaatgaagatggt 56 ||||| |||||||||||||| || || ||||||||||||| Sbjct: 127 gtcaaaaacatccaaaagatcacccaatcaatgaagatggt 167
>emb|BX088705.18| Zebrafish DNA sequence from clone DKEY-21G19, complete sequence Length = 204103 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 405 agatgatatcttgaaaaatgttgaa 429 ||||||||| ||||||||||||||| Sbjct: 46708 agatgatattttgaaaaatgttgaa 46684
>dbj|AK110586.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F02, full insert sequence Length = 1210 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 25 atccaaaagattacgaaagcaatgaagatggttgcagcatc 65 ||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 263 atccagaagatcaccaaggcaatgaagatggttgccgcatc 303 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ggtctctgtggtggtatcaattct 219 ||||||||||||||| |||||||| Sbjct: 458 ggtctctgtggtggtgtcaattct 481
>dbj|AK108313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G06, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 aagggtctctgtggtggtatc 213 ||||||||||||||||||||| Sbjct: 370 aagggtctctgtggtggtatc 390
>gb|BC097063.1| Danio rerio Sec23 homolog A (S. cerevisiae), mRNA (cDNA clone MGC:113987 IMAGE:2601268), complete cds Length = 3189 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gatatcttgaaaaatgttgaa 429 ||||||||||||||||||||| Sbjct: 3157 gatatcttgaaaaatgttgaa 3137
>emb|AL672271.9| Mouse DNA sequence from clone RP23-450H23 on chromosome X, complete sequence Length = 196613 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gtgtaaatgtcaagaagaatg 169 ||||||||||||||||||||| Sbjct: 91753 gtgtaaatgtcaagaagaatg 91733
>gb|AC167185.4| Mus musculus chromosome 3, clone RP23-355G8, complete sequence Length = 213731 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ataagagttgtttttaacaa 458 |||||||||||||||||||| Sbjct: 146796 ataagagttgtttttaacaa 146777
>gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, complete sequence Length = 195627 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 aacaaaatcagaaatcctgc 604 |||||||||||||||||||| Sbjct: 140293 aacaaaatcagaaatcctgc 140274
>gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosome 18, complete sequence Length = 201850 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 aacaaaatcagaaatcctgc 604 |||||||||||||||||||| Sbjct: 13742 aacaaaatcagaaatcctgc 13723
>gb|BC060917.1| Danio rerio ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, mRNA (cDNA clone MGC:73209 IMAGE:4790341), complete cds Length = 1112 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatcaaa 68 ||||||||||||| ||||| || || | ||||||||||| |||||| |||| Sbjct: 126 tcaagaacatccagaagatcaccaagtccatgaagatggtggcagcagcaaa 177
>gb|AC148650.1| Pan troglodytes chromosome X clone PTB-044F10 map human ortholog q28, complete sequence Length = 153826 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cattcacagctcttcttggg 138 |||||||||||||||||||| Sbjct: 59404 cattcacagctcttcttggg 59385
>ref|XM_748962.1| Aspergillus fumigatus Af293 1,3-beta-glucan biosynthesis protein (Afu5g05770) partial mRNA Length = 1548 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 ttgctgtgctcgcagatgatatct 415 ||||||||||||| |||||||||| Sbjct: 938 ttgctgtgctcgcggatgatatct 961
>gb|AC125524.4| Mus musculus BAC clone RP24-378N16 from chromosome 6, complete sequence Length = 175917 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 agagaaagaaagcaagtatg 286 |||||||||||||||||||| Sbjct: 56128 agagaaagaaagcaagtatg 56147
>gb|AE014313.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 10 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 taaatgtcaagaagaatgtt 171 |||||||||||||||||||| Sbjct: 86018 taaatgtcaagaagaatgtt 85999
>ref|XM_736259.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001038.02.0) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 aaattgaaggaggtgaaacaaaat 592 |||||||||||||||||| ||||| Sbjct: 379 aaattgaaggaggtgaaagaaaat 402
>gb|AC102375.8| Mus musculus chromosome 3, clone RP23-281M6, complete sequence Length = 149467 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ataagagttgtttttaacaa 458 |||||||||||||||||||| Sbjct: 142007 ataagagttgtttttaacaa 142026
>emb|X64256.1|MGATPOP M.gallisepticum DNA for atp operon Length = 7920 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aagattacgaaagcaatgaagatg 54 |||||||| ||||||||||||||| Sbjct: 5034 aagattaccaaagcaatgaagatg 5057
>emb|BX323048.4| Human DNA sequence from clone RP11-539G11 on chromosome 1 Contains the 3' end of a novel gene (FLJ36760), complete sequence Length = 114676 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgttattgtagccattacat 187 |||||||||||||||||||| Sbjct: 47085 tgttattgtagccattacat 47066
>emb|AL670405.3| Human DNA sequence from clone RP13-148E24 on chromosome X, complete sequence Length = 144353 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcttgaaaaatgttgaatat 432 |||||||||||||||||||| Sbjct: 121509 tcttgaaaaatgttgaatat 121528
>emb|AL356857.10| Human DNA sequence from clone RP11-211O14 on chromosome 13, complete sequence Length = 88528 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 taaatgtcaagaagaatgtt 171 |||||||||||||||||||| Sbjct: 36154 taaatgtcaagaagaatgtt 36135
>emb|AL359394.9| Human DNA sequence from clone RP11-264M20 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 137246 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgaaaaatgttgaatatga 434 |||||||||||||||||||| Sbjct: 87381 ttgaaaaatgttgaatatga 87362
>emb|BX547932.17| Zebrafish DNA sequence from clone DKEY-269E10 in linkage group 7, complete sequence Length = 82464 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tgatatcttgaaaaatgttg 427 |||||||||||||||||||| Sbjct: 3895 tgatatcttgaaaaatgttg 3914
>gb|U52112.2| Homo sapiens chromosome X clone QLL-D9139, Qc-7G12, Qc-7C1, Qc-12B2, Qc-12D5, QLL-A074, Qc-9D3 map q28, complete sequence Length = 181343 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cattcacagctcttcttggg 138 |||||||||||||||||||| Sbjct: 31256 cattcacagctcttcttggg 31237
>emb|AL662900.12| Mouse DNA sequence from clone RP23-413L24 on chromosome 11 Contains a CpG island, complete sequence Length = 190156 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 agtgtcaagaacatccaaaa 32 |||||||||||||||||||| Sbjct: 52984 agtgtcaagaacatccaaaa 53003
>emb|AL390157.1|HSM802760 Homo sapiens genomic DNA; cDNA DKFZp434D179 (from clone DKFZp434D179) Length = 3160 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttgaaaaatgttgaatatga 434 |||||||||||||||||||| Sbjct: 2581 ttgaaaaatgttgaatatga 2562
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cattcacagctcttcttggg 138 |||||||||||||||||||| Sbjct: 28875 cattcacagctcttcttggg 28856
>gb|AC158637.3| Mus musculus 10 BAC RP24-79K22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221409 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gagttgtttttaacaagttt 462 |||||||||||||||||||| Sbjct: 109368 gagttgtttttaacaagttt 109349
>gb|AC093778.3| Homo sapiens BAC clone RP11-167F5 from 4, complete sequence Length = 142526 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tccaggaagcatattgaaat 347 |||||||||||||||||||| Sbjct: 21702 tccaggaagcatattgaaat 21721
>ref|NM_200041.1| Danio rerio ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (atp5c1), mRNA Length = 1112 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 17 tcaagaacatccaaaagattacgaaagcaatgaagatggttgcagcatcaaa 68 ||||||||||||| ||||| || || | ||||||||||| |||||| |||| Sbjct: 126 tcaagaacatccagaagatcaccaagtccatgaagatggtggcagcagcaaa 177
>gb|AC084448.1|AC084448 Caenorhabditis briggsae cosmid CB019H04, complete sequence Length = 63653 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tccaaaagattacgaaagca 45 |||||||||||||||||||| Sbjct: 30391 tccaaaagattacgaaagca 30372
>gb|AC023389.13| Homo sapiens chromosome 17, clone RP11-82O19, complete sequence Length = 127918 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aaaagtgtcaagaacatcca 29 |||||||||||||||||||| Sbjct: 84293 aaaagtgtcaagaacatcca 84274
>gb|AC153536.3| Mus musculus 10 BAC RP23-402F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208392 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gagttgtttttaacaagttt 462 |||||||||||||||||||| Sbjct: 169131 gagttgtttttaacaagttt 169112
>gb|AC149875.2| Xenopus tropicalis clone CH216-151P11, complete sequence Length = 155394 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aagattacgaaagcaatgaa 50 |||||||||||||||||||| Sbjct: 36420 aagattacgaaagcaatgaa 36439
>emb|BX927123.8| Zebrafish DNA sequence from clone CH211-278N15 in linkage group 20, complete sequence Length = 121145 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 agatgatatcttgaaaaatgttga 428 ||||||||| |||||||||||||| Sbjct: 107143 agatgatattttgaaaaatgttga 107120
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 agagaaagaaagcaagtatg 286 |||||||||||||||||||| Sbjct: 184496 agagaaagaaagcaagtatg 184515
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome Length = 996422 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aagattacgaaagcaatgaagatg 54 |||||||| ||||||||||||||| Sbjct: 412942 aagattaccaaagcaatgaagatg 412965
>dbj|AP003028.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-446B2, complete sequence Length = 176320 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcttgaaaaatgttgaatat 432 |||||||||||||||||||| Sbjct: 42015 tcttgaaaaatgttgaatat 41996
>gb|M20255.1|BACATPA B.megaterium ATP synthase i,a,c,b,delta,alpha,gamma,beta and epsilon subunit genes, complete cds, and ORF Length = 7307 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 32 agattacgaaagcaatgaagatggttgcagcatcaaagct 71 ||||||||||||||||| | |||||| |||| ||||||| Sbjct: 4522 agattacgaaagcaatggaaatggtttcagctgcaaagct 4561
>emb|AL663037.13| Mouse DNA sequence from clone RP23-103K12 on chromosome 4, complete sequence Length = 246021 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ccacaatactgtccccagag 513 |||||||||||||||||||| Sbjct: 209401 ccacaatactgtccccagag 209420
>dbj|AP002014.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2262K17, complete sequence Length = 132614 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccaggaagcatattgaaat 347 |||||||||||||||||||| Sbjct: 74935 tccaggaagcatattgaaat 74916
>emb|AL773583.9| Mouse DNA sequence from clone RP23-384O2 on chromosome X, complete sequence Length = 131402 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tatcaattctacatctgtta 229 |||||||||||||||||||| Sbjct: 56529 tatcaattctacatctgtta 56510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,138,320 Number of Sequences: 3902068 Number of extensions: 7138320 Number of successful extensions: 175898 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 175582 Number of HSP's gapped (non-prelim): 291 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
