ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184331.2| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
3dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
4dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8gb|AY107101.1| Zea mays PCO079267 mRNA sequence 88 4e-14
9gb|AE009181.1| Agrobacterium tumefaciens str. C58 circular chrom... 50 0.009
10gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 50 0.009
11gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, com... 42 2.2
12ref|XM_636276.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
13emb|BX511120.8| Zebrafish DNA sequence from clone CH211-214C7 in... 42 2.2
14ref|NM_001013524.1| Danio rerio zgc:101874 (zgc:101874), mRNA 42 2.2
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
17gb|BC090830.1| Danio rerio zgc:101874, mRNA (cDNA clone MGC:1018... 42 2.2
18dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in ... 42 2.2
20gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.9
21ref|XM_476339.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
22gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, com... 40 8.9
23gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL0... 40 8.9
24gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 8.9
25gb|AY166140.1| Echium plantagineum clone 22.30A TCP gene, partia... 40 8.9
26gb|AY166139.1| Echium plantagineum clone 22.37A TCP gene, partia... 40 8.9
27gb|AY166138.1| Echium plantagineum clone 22.67A TCP gene, partia... 40 8.9
28gb|AY166134.1| Echium plantagineum clone 22.75A TCP gene, partia... 40 8.9
29gb|AY166133.1| Echium plantagineum clone 22.4A TCP gene, partial... 40 8.9
30gb|AY166132.1| Echium plantagineum clone 22.73A TCP gene, partia... 40 8.9
31gb|AY166131.1| Echium plantagineum clone 22.40A TCP gene, partia... 40 8.9
32gb|AY168175.1| Echium plantagineum EpTCP1 TCP protein (TCP) gene... 40 8.9
33emb|AL033536.1|CEY53C10A Caenorhabditis elegans YAC Y53C10A, com... 40 8.9
34gb|U41556.2| Caenorhabditis elegans cosmid C25B8, complete sequence 40 8.9
35emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chr... 40 8.9
36gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 8.9
37emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chr... 40 8.9
38emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chro... 40 8.9
39emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J... 40 8.9
40emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and l... 40 8.9
41tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (... 40 8.9
42gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, co... 40 8.9
43gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, co... 40 8.9
44gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, com... 40 8.9
45gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosom... 40 8.9
46ref|NM_171710.2| Caenorhabditis elegans potassium channel, KvQLT... 40 8.9
47ref|NM_171709.2| Caenorhabditis elegans potassium channel, KvQLT... 40 8.9
48ref|NM_060634.2| Caenorhabditis elegans Rho GTPase Activating pr... 40 8.9
49gb|AY572974.1| Caenorhabditis elegans KQT-1 potassium channel (k... 40 8.9
50gb|AC084651.1|CBRG45O05 Caenorhabditis briggsae cosmid G45O05, c... 40 8.9
51gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, c... 40 8.9
52dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
53dbj|AK066040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
54dbj|AK061192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
55emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on ch... 40 8.9
56gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 8.9
57emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chr... 40 8.9
58dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
59dbj|AP006123.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.9 
>ref|NM_184331.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                       
Query: 190 gagaaattcccctttgagggccctgaattcaccgagcttcctcccaacgtgcagaagggc 249
           ||||||||||| |  ||||||||||||||||||||||| ||    || ||||||||||||
Sbjct: 660 gagaaattcccttacgagggccctgaattcaccgagctaccggtgaatgtgcagaagggc 719

                                                                       
Query: 250 ctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaacttcatgcacgat 309
           || ||||||| |||||||  | ||||  | || ||| | |||||||||| ||||||||||
Sbjct: 720 ctattcaagtacctggagcaaagagggatcactctgccgaccaccaactacatgcacgat 779

                                                                  
Query: 310 tacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaagctcaagg 364
           |||||| | |||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 780 tacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaagctgaagg 834



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                       
Query: 76  aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
           ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 543 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 602

                                   
Query: 136 gaggagatcaccattgacgacatg 159
           |||||||||||||| |||||||||
Sbjct: 603 gaggagatcaccatcgacgacatg 626
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>dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C02, full
           insert sequence
          Length = 1102

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                       
Query: 190 gagaaattcccctttgagggccctgaattcaccgagcttcctcccaacgtgcagaagggc 249
           ||||||||||| |  ||||||||||||||||||||||| ||    || ||||||||||||
Sbjct: 688 gagaaattcccttacgagggccctgaattcaccgagctaccggtgaatgtgcagaagggc 747

                                                                       
Query: 250 ctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaacttcatgcacgat 309
           || ||||||| |||||||  | ||||  | || ||| | |||||||||| ||||||||||
Sbjct: 748 ctattcaagtacctggagcaaagagggatcactctgccgaccaccaactacatgcacgat 807

                                                                  
Query: 310 tacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaagctcaagg 364
           |||||| | |||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 808 tacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaagctgaagg 862



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                       
Query: 76  aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
           ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 571 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 630

                                   
Query: 136 gaggagatcaccattgacgacatg 159
           |||||||||||||| |||||||||
Sbjct: 631 gaggagatcaccatcgacgacatg 654
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>dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A12, full
           insert sequence
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                       
Query: 190 gagaaattcccctttgagggccctgaattcaccgagcttcctcccaacgtgcagaagggc 249
           ||||||||||| |  ||||||||||||||||||||||| ||    || ||||||||||||
Sbjct: 660 gagaaattcccttacgagggccctgaattcaccgagctaccggtgaatgtgcagaagggc 719

                                                                       
Query: 250 ctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaacttcatgcacgat 309
           || ||||||| |||||||  | ||||  | || ||| | |||||||||| ||||||||||
Sbjct: 720 ctattcaagtacctggagcaaagagggatcactctgccgaccaccaactacatgcacgat 779

                                                                  
Query: 310 tacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaagctcaagg 364
           |||||| | |||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 780 tacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaagctgaagg 834



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                       
Query: 76  aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
           ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 543 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 602

                                   
Query: 136 gaggagatcaccattgacgacatg 159
           |||||||||||||| |||||||||
Sbjct: 603 gaggagatcaccatcgacgacatg 626
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>dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K21, full
           insert sequence
          Length = 1172

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 205 gagggccctgaattcaccgagcttcctcccaacgtgcagaagggcctgttcaagttcctg 264
           ||||||||||||||||||||||| ||    || |||||||||||||| ||||||| ||||
Sbjct: 704 gagggccctgaattcaccgagctaccggtgaatgtgcagaagggcctattcaagtacctg 763

                                                                       
Query: 265 gaggtacgaggtgtgacgctgacaaccaccaacttcatgcacgattacatgatcaccaag 324
           |||  | ||||  | || ||| | |||||||||| |||||||||||||||| | ||||||
Sbjct: 764 gagcaaagagggatcactctgccgaccaccaactacatgcacgattacatggtgaccaag 823

                                                   
Query: 325 cagaccaaggagtacgtccggtggatgaccaagctcaagg 364
           || ||||||||||||||| |||||||||||||||| ||||
Sbjct: 824 caaaccaaggagtacgtcgggtggatgaccaagctgaagg 863



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                       
Query: 76  aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
           ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 572 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 631

                                   
Query: 136 gaggagatcaccattgacgacatg 159
           |||||||||||||| |||||||||
Sbjct: 632 gaggagatcaccatcgacgacatg 655
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                           
Query: 76      aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
               ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 2374164 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 2374105

                                       
Query: 136     gaggagatcaccattgacgacatg 159
               |||||||||||||| |||||||||
Sbjct: 2374104 gaggagatcaccatcgacgacatg 2374081



 Score =  117 bits (59), Expect = 5e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                           
Query: 238     gtgcagaagggcctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaac 297
               |||||||||||||| ||||||| |||||||  | ||||  | || ||| | |||||||||
Sbjct: 2373907 gtgcagaagggcctattcaagtacctggagcaaagagggatcactctgccgaccaccaac 2373848

                                                                           
Query: 298     ttcatgcacgattacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaag 357
               | |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 2373847 tacatgcacgattacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaag 2373788

                      
Query: 358     ctcaagg 364
               || ||||
Sbjct: 2373787 ctgaagg 2373781



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 190     gagaaattcccctttgagggccctgaattcac 221
               ||||||||||| |  |||||||||||||||||
Sbjct: 2374047 gagaaattcccttacgagggccctgaattcac 2374016
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                          
Query: 76     aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
              ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 103214 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 103155

                                      
Query: 136    gaggagatcaccattgacgacatg 159
              |||||||||||||| |||||||||
Sbjct: 103154 gaggagatcaccatcgacgacatg 103131



 Score =  117 bits (59), Expect = 5e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                          
Query: 238    gtgcagaagggcctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaac 297
              |||||||||||||| ||||||| |||||||  | ||||  | || ||| | |||||||||
Sbjct: 102957 gtgcagaagggcctattcaagtacctggagcaaagagggatcactctgccgaccaccaac 102898

                                                                          
Query: 298    ttcatgcacgattacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaag 357
              | |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 102897 tacatgcacgattacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaag 102838

                     
Query: 358    ctcaagg 364
              || ||||
Sbjct: 102837 ctgaagg 102831



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 190    gagaaattcccctttgagggccctgaattcac 221
              ||||||||||| |  |||||||||||||||||
Sbjct: 103097 gagaaattcccttacgagggccctgaattcac 103066
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0019D06
          Length = 167405

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                          
Query: 76     aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
              ||||||| |||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 157748 aaggtgacagtctccaagggctctgggcccaaacttgagttcacctgcacagcctttcgt 157689

                                      
Query: 136    gaggagatcaccattgacgacatg 159
              |||||||||||||| |||||||||
Sbjct: 157688 gaggagatcaccatcgacgacatg 157665



 Score =  117 bits (59), Expect = 5e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                          
Query: 238    gtgcagaagggcctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaac 297
              |||||||||||||| ||||||| |||||||  | ||||  | || ||| | |||||||||
Sbjct: 157491 gtgcagaagggcctattcaagtacctggagcaaagagggatcactctgccgaccaccaac 157432

                                                                          
Query: 298    ttcatgcacgattacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaag 357
              | |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 157431 tacatgcacgattacatggtgaccaagcaaaccaaggagtacgtcgggtggatgaccaag 157372

                     
Query: 358    ctcaagg 364
              || ||||
Sbjct: 157371 ctgaagg 157365



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 190    gagaaattcccctttgagggccctgaattcac 221
              ||||||||||| |  |||||||||||||||||
Sbjct: 157631 gagaaattcccttacgagggccctgaattcac 157600
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>gb|AY107101.1| Zea mays PCO079267 mRNA sequence
          Length = 1088

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 143/176 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 agagaaattcccctttgagggccctgaattcaccgagcttcctcccaacgtgcagaaggg 248
           |||||| |||||||  |||||||| || ||||||||||| |||   || || ||||| ||
Sbjct: 700 agagaagttcccctacgagggccccgagttcaccgagctccctgtgaatgttcagaaagg 759

                                                                       
Query: 249 cctgttcaagttcctggaggtacgaggtgtgacgctgacaaccaccaacttcatgcacga 308
           ||||||||||| |||||||  | |||| || |||||| |  | |||||||  ||||||||
Sbjct: 760 cctgttcaagtacctggagcaaagaggggtaacgctgtcggctaccaactatatgcacga 819

                                                                   
Query: 309 ttacatgatcaccaagcagaccaaggagtacgtccggtggatgaccaagctcaagg 364
           ||||||| | || |||||| |  |||||||| ||||||||||||| ||||| ||||
Sbjct: 820 ttacatggtgactaagcaggctcaggagtacatccggtggatgactaagctgaagg 875



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                       
Query: 76  aaggtgatagtctccaagggatctggcccaaaccttgagttcacctgcacagcctttcgt 135
           |||||| |||| ||||| |  ||||||||||| || |||||||| ||||||||||| || 
Sbjct: 581 aaggtggtagtttccaaagactctggcccaaagctcgagttcacatgcacagccttccgc 640

                                                       
Query: 136 gaggagatcaccattgacgacatgatgatagcagagaaaacaga 179
           |||||||||||||| || || ||| ||||||  |||||||||||
Sbjct: 641 gaggagatcaccatcgatgatatgctgatagttgagaaaacaga 684
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>gb|AE009181.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 207
            of 256 of the complete sequence
          Length = 13679

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 29   atgatgacgatgaagatgagggcgg 53
            |||||||||||||||||||||||||
Sbjct: 2743 atgatgacgatgaagatgagggcgg 2719
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 29      atgatgacgatgaagatgagggcgg 53
               |||||||||||||||||||||||||
Sbjct: 2292477 atgatgacgatgaagatgagggcgg 2292453
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>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence
          Length = 183724

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 522   gcagagtgagtttcatttgtgttct 546
             ||||||||||||||| |||||||||
Sbjct: 49433 gcagagtgagtttcagttgtgttct 49409
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>ref|XM_636276.1| Dictyostelium discoideum hypothetical protein (DDB0206508), partial
            mRNA
          Length = 3255

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   atgatgacgatgaagatgagg 49
            |||||||||||||||||||||
Sbjct: 2267 atgatgacgatgaagatgagg 2287
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>emb|BX511120.8| Zebrafish DNA sequence from clone CH211-214C7 in linkage group 1,
              complete sequence
          Length = 204893

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     atgatgacgatgaagatgagg 49
              |||||||||||||||||||||
Sbjct: 107596 atgatgacgatgaagatgagg 107616
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>ref|NM_001013524.1| Danio rerio zgc:101874 (zgc:101874), mRNA
          Length = 1483

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 31  gatgacgatgaagatgagggcggcg 55
           |||||||| ||||||||||||||||
Sbjct: 369 gatgacgaagaagatgagggcggcg 345
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 160      atgatagcagagaaaacagaa 180
                |||||||||||||||||||||
Sbjct: 29341011 atgatagcagagaaaacagaa 29340991



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   tgaaaaaatatcctgtagaa 581
             ||||||||||||||||||||
Sbjct: 20359 tgaaaaaatatcctgtagaa 20340
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0597G07
          Length = 152928

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 160    atgatagcagagaaaacagaa 180
              |||||||||||||||||||||
Sbjct: 129700 atgatagcagagaaaacagaa 129680
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>gb|BC090830.1| Danio rerio zgc:101874, mRNA (cDNA clone MGC:101874 IMAGE:7253873),
           complete cds
          Length = 1483

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 31  gatgacgatgaagatgagggcggcg 55
           |||||||| ||||||||||||||||
Sbjct: 369 gatgacgaagaagatgagggcggcg 345
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0034A04
          Length = 151263

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 160  atgatagcagagaaaacagaa 180
            |||||||||||||||||||||
Sbjct: 3933 atgatagcagagaaaacagaa 3913
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>emb|BX248510.3| Zebrafish DNA sequence from clone DKEY-88P24 in linkage group 10,
             complete sequence
          Length = 170386

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    gatgacgatgaagatgagggcggcg 55
             |||||||| ||||||||||||||||
Sbjct: 96703 gatgacgaagaagatgagggcggcg 96679
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 29     atgatgacgatgaagatgagggcggcga 56
              |||||||||||||  |||||||||||||
Sbjct: 590414 atgatgacgatgatcatgagggcggcga 590387
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>ref|XM_476339.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2132

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  tgaaaaaatatcctgtagaa 581
            ||||||||||||||||||||
Sbjct: 2089 tgaaaaaatatcctgtagaa 2070
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>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence
          Length = 167235

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   catgatgatagcagagaaaacaga 179
             |||||||| |||||||||||||||
Sbjct: 46713 catgatgacagcagagaaaacaga 46690
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>gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL042C gene, complete
           cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 500 gtagtcctgtatcagcagct 519
           ||||||||||||||||||||
Sbjct: 144 gtagtcctgtatcagcagct 125
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>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tgcacgattacatgatcacc 321
              ||||||||||||||||||||
Sbjct: 111667 tgcacgattacatgatcacc 111686
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>gb|AY166140.1| Echium plantagineum clone 22.30A TCP gene, partial sequence
          Length = 349

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 214 tgatgacgatgaagatgagg 233
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>gb|AY166139.1| Echium plantagineum clone 22.37A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY166138.1| Echium plantagineum clone 22.67A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY166134.1| Echium plantagineum clone 22.75A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY166133.1| Echium plantagineum clone 22.4A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY166132.1| Echium plantagineum clone 22.73A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY166131.1| Echium plantagineum clone 22.40A TCP gene, partial sequence
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>gb|AY168175.1| Echium plantagineum EpTCP1 TCP protein (TCP) gene, partial cds
          Length = 355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  tgatgacgatgaagatgagg 49
           ||||||||||||||||||||
Sbjct: 220 tgatgacgatgaagatgagg 239
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>emb|AL033536.1|CEY53C10A Caenorhabditis elegans YAC Y53C10A, complete sequence
          Length = 78153

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgatgacgatgaagatgag 48
             ||||||||||||||||||||
Sbjct: 31118 atgatgacgatgaagatgag 31137
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>gb|U41556.2| Caenorhabditis elegans cosmid C25B8, complete sequence
          Length = 35814

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgatgacgatgaagatgag 48
             ||||||||||||||||||||
Sbjct: 22663 atgatgacgatgaagatgag 22682
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>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ccaagctcaagggtttggtc 372
              ||||||||||||||||||||
Sbjct: 147398 ccaagctcaagggtttggtc 147417
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     acgtgcagaagggcctgttc 255
               ||||||||||||||||||||
Sbjct: 1465167 acgtgcagaagggcctgttc 1465186
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>emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chromosome 13q13.1-14.3
             Contains a novel gene, complete sequence
          Length = 110911

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tcccctttgagggccctgaa 216
             ||||||||||||||||||||
Sbjct: 20809 tcccctttgagggccctgaa 20828
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>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a novel
              gene, complete sequence
          Length = 148503

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    tttcatttgtgttcttctgg 551
              ||||||||||||||||||||
Sbjct: 121366 tttcatttgtgttcttctgg 121385
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>emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J4 on chromosome 1q24.1-24.3
             Contains two genes for novel proteins (FLJ10514) and two
             CpG islands, complete sequence
          Length = 133936

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aaacagaacctgatgcagag 192
             ||||||||||||||||||||
Sbjct: 80223 aaacagaacctgatgcagag 80204
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>emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and lambda 6569
          Length = 33954

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   gtagtcctgtatcagcagct 519
             ||||||||||||||||||||
Sbjct: 11240 gtagtcctgtatcagcagct 11259
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>tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (HDC19000) gene,
           complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 tgcacgattacatgatcacc 321
           ||||||||||||||||||||
Sbjct: 346 tgcacgattacatgatcacc 327
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>gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, complete sequence
          Length = 132735

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   atgcagagaaattccccttt 204
             ||||||||||||||||||||
Sbjct: 31510 atgcagagaaattccccttt 31491
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>gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, complete sequence
          Length = 189678

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   atttgtgttcttctggagct 555
             ||||||||||||||||||||
Sbjct: 67535 atttgtgttcttctggagct 67516
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>gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, complete sequence
          Length = 136843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    atgcagagaaattccccttt 204
              ||||||||||||||||||||
Sbjct: 109423 atgcagagaaattccccttt 109404
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>gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosome 12, complete
             sequence
          Length = 155139

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   ttcatttgtgttcttctgga 552
             ||||||||||||||||||||
Sbjct: 50972 ttcatttgtgttcttctgga 50953
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>ref|NM_171710.2| Caenorhabditis elegans potassium channel, KvQLT family member (kqt-1)
            (kqt-1) mRNA, complete cds
          Length = 2532

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgatgacgatgaagatgag 48
            ||||||||||||||||||||
Sbjct: 2172 atgatgacgatgaagatgag 2191
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>ref|NM_171709.2| Caenorhabditis elegans potassium channel, KvQLT family member (kqt-1)
            (kqt-1) mRNA, complete cds
          Length = 2494

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgatgacgatgaagatgag 48
            ||||||||||||||||||||
Sbjct: 2147 atgatgacgatgaagatgag 2166
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>ref|NM_060634.2| Caenorhabditis elegans Rho GTPase Activating protein family member
            (rga-2) (rga-2) mRNA, complete cds
          Length = 2910

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgatgacgatgaagatgag 48
            ||||||||||||||||||||
Sbjct: 1668 atgatgacgatgaagatgag 1687
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>gb|AY572974.1| Caenorhabditis elegans KQT-1 potassium channel (kqt-1) mRNA, complete
            cds
          Length = 2363

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgatgacgatgaagatgag 48
            ||||||||||||||||||||
Sbjct: 2003 atgatgacgatgaagatgag 2022
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>gb|AC084651.1|CBRG45O05 Caenorhabditis briggsae cosmid G45O05, complete sequence
          Length = 35608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgatgacgatgaagatgag 48
             ||||||||||||||||||||
Sbjct: 22902 atgatgacgatgaagatgag 22921
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>gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, complete sequence
          Length = 43735

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  agagaaaacagaacctgatg 187
            ||||||||||||||||||||
Sbjct: 8738 agagaaaacagaacctgatg 8719
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   tgaaaaaatatcctgtagaa 581
             ||||||||||||||||||||
Sbjct: 19658 tgaaaaaatatcctgtagaa 19639
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>dbj|AK066040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048L15, full
            insert sequence
          Length = 2131

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  tgaaaaaatatcctgtagaa 581
            ||||||||||||||||||||
Sbjct: 2088 tgaaaaaatatcctgtagaa 2069
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>dbj|AK061192.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F08, full
            insert sequence
          Length = 1294

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  tgaaaaaatatcctgtagaa 581
            ||||||||||||||||||||
Sbjct: 1278 tgaaaaaatatcctgtagaa 1259
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>emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on chromosome 12, complete
            sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 533  ttcatttgtgttcttctgga 552
            ||||||||||||||||||||
Sbjct: 6217 ttcatttgtgttcttctgga 6198
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tgcacgattacatgatcacc 321
              ||||||||||||||||||||
Sbjct: 204074 tgcacgattacatgatcacc 204055
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>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete
             sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aaacagaacctgatgcagag 192
             ||||||||||||||||||||
Sbjct: 63051 aaacagaacctgatgcagag 63032
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>dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             fosmid clone:OSJNOa219C16
          Length = 39990

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   tgaaaaaatatcctgtagaa 581
             ||||||||||||||||||||
Sbjct: 20359 tgaaaaaatatcctgtagaa 20340
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>dbj|AP006123.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT41E18, TM0207,
             complete sequence
          Length = 115290

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tgatgacgatgaagatgagg 49
             ||||||||||||||||||||
Sbjct: 10391 tgatgacgatgaagatgagg 10410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,980,025
Number of Sequences: 3902068
Number of extensions: 4980025
Number of successful extensions: 106247
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105968
Number of HSP's gapped (non-prelim): 267
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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