Clone Information

BLAST Search Result

Clone Name	bags20d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_549989.1\| Oryza sativa (japonica cultivar-group), mRNA	652	0.0
2	dbj\|AK103631.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	652	0.0
3	gb\|AY104137.1\| Zea mays PCO146094 mRNA sequence	611	e-171
4	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	367	3e-98
5	dbj\|AP003233.3\| Oryza sativa (japonica cultivar-group) genomic D...	367	3e-98
6	dbj\|AP002909.2\| Oryza sativa (japonica cultivar-group) genomic D...	367	3e-98
7	ref\|XM_612946.2\| PREDICTED: Bos taurus similar to Baculoviral IA...	60	1e-05
8	gb\|AC146750.32\| Medicago truncatula clone mth2-16o6, complete se...	58	4e-05
9	ref\|XM_515396.1\| PREDICTED: Pan troglodytes LOC459141 (LOC459141...	54	6e-04
10	ref\|NM_016252.2\| Homo sapiens baculoviral IAP repeat-containing ...	54	6e-04
11	dbj\|AK023848.1\| Homo sapiens cDNA FLJ13786 fis, clone PLACE40006...	54	6e-04
12	dbj\|AK023788.1\| Homo sapiens cDNA FLJ13726 fis, clone PLACE30000...	54	6e-04
13	gb\|AF265555.1\|AF265555 Homo sapiens ubiquitin-conjugating BIR-do...	54	6e-04
14	dbj\|AB033115.2\| Homo sapiens mRNA for KIAA1289 protein, partial cds	54	6e-04
15	ref\|NM_127245.2\| Arabidopsis thaliana ubiquitin conjugating enzy...	52	0.002
16	gb\|AC005167.3\| Arabidopsis thaliana chromosome 2 clone F12A24 ma...	52	0.002
17	ref\|NM_179887.1\| Arabidopsis thaliana ubiquitin conjugating enzy...	46	0.15
18	gb\|AY091326.1\| Arabidopsis thaliana putative ubiquitin-conjugati...	46	0.15
19	gb\|AY074292.1\| Arabidopsis thaliana putative E2, ubiquitin-conju...	46	0.15
20	gb\|AC144658.33\| Medicago truncatula clone mth2-31g20, complete s...	46	0.15
21	gb\|U78721.3\| Arabidopsis thaliana chromosome 2 clone T1B8 map TE...	46	0.15
22	gb\|DQ027037.1\| Arabidopsis thaliana ubiquitinating enzyme (At2g3...	46	0.15
23	ref\|XM_848959.1\| PREDICTED: Canis familiaris similar to Baculovi...	44	0.58
24	ref\|XM_845913.1\| PREDICTED: Canis familiaris similar to Baculovi...	44	0.58
25	ref\|XM_475903.1\| Oryza sativa (japonica cultivar-group), predic...	42	2.3
26	gb\|AC104709.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
27	emb\|CR352236.17\| Zebrafish DNA sequence from clone DKEYP-123E12 ...	42	2.3
28	gb\|AC144478.20\| Medicago truncatula clone mth2-20b20, complete s...	42	2.3
29	emb\|AL591985.1\|RME591985 Sinorhizobium meliloti 1021 complete pSymB	42	2.3
30	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
31	emb\|CR925778.5\| Zebrafish DNA sequence from clone DKEY-63L2 in l...	42	2.3
32	emb\|AL929192.16\| Zebrafish DNA sequence from clone CH211-250E5 i...	42	2.3
33	ref\|XM_476232.1\| Oryza sativa (japonica cultivar-group), predic...	40	9.0
34	gb\|AC135420.4\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.0
35	ref\|XM_455217.1\| Kluyveromyces lactis NRRL Y-1140, KLLA0F03036g ...	40	9.0
36	gb\|AC145396.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.0
37	emb\|BX957253.12\| Zebrafish DNA sequence from clone DKEY-234L14 i...	40	9.0
38	gb\|AC152405.15\| Medicago truncatula clone mth2-49f2, complete se...	40	9.0
39	emb\|AL627308.20\| Human DNA sequence from clone RP11-211A18 on ch...	40	9.0
40	emb\|AL513550.9\| Human DNA sequence from clone RP11-98I9 on chrom...	40	9.0
41	emb\|AL023581.1\|HS45I4 Human DNA sequence from clone RP1-45I4 on ...	40	9.0
42	emb\|CR382126.1\| Kluyveromyces lactis strain NRRL Y-1140 chromoso...	40	9.0
43	gb\|AC144724.9\| Medicago truncatula clone mth2-7g10, complete seq...	40	9.0
44	dbj\|AK027751.1\| Homo sapiens cDNA FLJ14845 fis, clone PLACE1000308	40	9.0
45	dbj\|AP007167.1\| Aspergillus oryzae RIB40 genomic DNA, SC020	40	9.0
46	gb\|AC079402.5\| Homo sapiens BAC clone RP11-597E15 from 2, comple...	40	9.0
47	gb\|AC093381.5\| Homo sapiens BAC clone RP11-436J10 from 2, comple...	40	9.0
48	gb\|AC117396.2\| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cance...	40	9.0
49	emb\|AL954215.1\| Pan troglodytes chromosome 22 clone RP43-034B14 ...	40	9.0
50	dbj\|AK069430.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.0
51	dbj\|AK115981.1\| Ciona intestinalis cDNA, clone:citb002p15, full ...	40	9.0
52	emb\|AL390860.10\| Human DNA sequence from clone RP11-656O22 on ch...	40	9.0
53	gb\|AC087242.10\| Homo sapiens 12 BAC RP11-361I14 (Roswell Park Ca...	40	9.0

>ref|XM_549989.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3562

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 88   cagcaagaatggggcatacttgagaagaacctaccagattatatttatgtgagggtattt 147
            ||||| ||||||  |||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 2695 cagcaggaatggaacatacttgagaaaaatctaccagattatatttatgttagggtattt 2754

                                                                        
Query: 148  gaagatcgtatggatctcattagagctgtgattattggagcaagtggcacaccataccaa 207
            || ||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 2755 gaggatcgaatggacctcataagagccgtgattattggagcaagtggaacaccataccaa 2814

                                                                        
Query: 208  gatggcctattcttctttgacttctaccttccacctgagtttccacaagctcctccgtcg 267
            ||||| || |||||||| |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 2815 gatggtcttttcttcttcgacttccaccttccacctgagtttccacaagttcctccgtcg 2874

                                                                        
Query: 268  gcatactatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaaggtt 327
            || |||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 2875 gcgtactatcattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaaggtc 2934

                                                                        
Query: 328  tgtttaagcctcttaaatacttggactggcagagggaatgaagtatgggatccatcctca 387
            || ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 2935 tgcttaagtctcttgaatacctggacgggcagagggaatgaagtatgggatccatcatca 2994

                                                                        
Query: 388  tctagtattctccaagtactagtctcacttcagggactagttctcaatgaaaagccctat 447
            || |||||||||||||| || || |||||||||||  | ||||| ||||||||||| |||
Sbjct: 2995 tccagtattctccaagtcctggtttcacttcagggcttggttctaaatgaaaagccttat 3054

                                                                        
Query: 448  ttcaatgaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgcactg 507
            || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 3055 tttaatgaagctggctatgagaagcaagttggtactgttgaaggggagaagaatgcattg 3114

                                                                        
Query: 508  ccatacaatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgaggcgg 567
            ||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| 
Sbjct: 3115 ccatataatgagaacacatatctgctgagcttgaaatccatgttgtatatcctgaggcga 3174

                                                                        
Query: 568  cctcctatgaatttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacatt 627
            ||||| ||| |||||||||| ||||  || || ||||||| |||||||||  | ||||||
Sbjct: 3175 cctccaatgcatttcgaggactttgcaaagagccacttctccaagcgtggcaaatacatt 3234

                                         
Query: 628  ctcaaagcttgtgaggcctacttgcaagg 656
            |||||||||||||||||||| ||||||||
Sbjct: 3235 ctcaaagcttgtgaggcctatttgcaagg 3263

to top

>dbj|AK103631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133P14, full
            insert sequence
          Length = 3560

 Score =  652 bits (329), Expect = 0.0
 Identities = 509/569 (89%)
 Strand = Plus / Plus

                                                                        
Query: 88   cagcaagaatggggcatacttgagaagaacctaccagattatatttatgtgagggtattt 147
            ||||| ||||||  |||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 2693 cagcaggaatggaacatacttgagaaaaatctaccagattatatttatgttagggtattt 2752

                                                                        
Query: 148  gaagatcgtatggatctcattagagctgtgattattggagcaagtggcacaccataccaa 207
            || ||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 2753 gaggatcgaatggacctcataagagccgtgattattggagcaagtggaacaccataccaa 2812

                                                                        
Query: 208  gatggcctattcttctttgacttctaccttccacctgagtttccacaagctcctccgtcg 267
            ||||| || |||||||| |||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 2813 gatggtcttttcttcttcgacttccaccttccacctgagtttccacaagttcctccgtcg 2872

                                                                        
Query: 268  gcatactatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaaggtt 327
            || |||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 2873 gcgtactatcattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaaggtc 2932

                                                                        
Query: 328  tgtttaagcctcttaaatacttggactggcagagggaatgaagtatgggatccatcctca 387
            || ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 2933 tgcttaagtctcttgaatacctggacgggcagagggaatgaagtatgggatccatcatca 2992

                                                                        
Query: 388  tctagtattctccaagtactagtctcacttcagggactagttctcaatgaaaagccctat 447
            || |||||||||||||| || || |||||||||||  | ||||| ||||||||||| |||
Sbjct: 2993 tccagtattctccaagtcctggtttcacttcagggcttggttctaaatgaaaagccttat 3052

                                                                        
Query: 448  ttcaatgaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgcactg 507
            || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 3053 tttaatgaagctggctatgagaagcaagttggtactgttgaaggggagaagaatgcattg 3112

                                                                        
Query: 508  ccatacaatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgaggcgg 567
            ||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||||| 
Sbjct: 3113 ccatataatgagaacacatatctgctgagcttgaaatccatgttgtatatcctgaggcga 3172

                                                                        
Query: 568  cctcctatgaatttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacatt 627
            ||||| ||| |||||||||| ||||  || || ||||||| |||||||||  | ||||||
Sbjct: 3173 cctccaatgcatttcgaggactttgcaaagagccacttctccaagcgtggcaaatacatt 3232

                                         
Query: 628  ctcaaagcttgtgaggcctacttgcaagg 656
            |||||||||||||||||||| ||||||||
Sbjct: 3233 ctcaaagcttgtgaggcctatttgcaagg 3261

to top

>gb|AY104137.1| Zea mays PCO146094 mRNA sequence
          Length = 990

 Score =  611 bits (308), Expect = e-171
 Identities = 500/564 (88%)
 Strand = Plus / Plus

                                                                       
Query: 94  gaatggggcatacttgagaagaacctaccagattatatttatgtgagggtatttgaagat 153
           |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 54  gaatggagcatacttgagaagaacctaccagactatatttatgtcagggtatttgaggat 113

                                                                       
Query: 154 cgtatggatctcattagagctgtgattattggagcaagtggcacaccataccaagatggc 213
           || ||||||||| | ||||| |||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 114 cgcatggatctcttgagagccgtgattgttggagcaagtggaacaccctaccaagatggc 173

                                                                       
Query: 214 ctattcttctttgacttctaccttccacctgagtttccacaagctcctccgtcggcatac 273
           || ||||||||||| ||| ||||||||| ||||| ||| | ||  |||||||| ||||||
Sbjct: 174 cttttcttctttgatttccaccttccacttgagtatccgctagtccctccgtcagcatac 233

                                                                       
Query: 274 tatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaaggtttgttta 333
           ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||| || 
Sbjct: 234 tatcattctggtggtttgcgtgtaaatccaaacctgtatgtggacgggaaggtttgcttg 293

                                                                       
Query: 334 agcctcttaaatacttggactggcagagggaatgaagtatgggatccatcctcatctagt 393
           || ||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 294 agtctcttaaatacctggactggcagagggaacgaagtttgggatccatcatcatcaagt 353

                                                                       
Query: 394 attctccaagtactagtctcacttcagggactagttctcaatgaaaagccctatttcaat 453
           ||||||||||||||||| |||||||||||| | |||||||||||||| |||||||| |||
Sbjct: 354 attctccaagtactagtttcacttcagggattggttctcaatgaaaaaccctattttaat 413

                                                                       
Query: 454 gaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgcactgccatac 513
           || ||||| |||||||||||||| ||||||||||||||||||||||||||| |||| || 
Sbjct: 414 gaggctgggtatgagaagcaagttggtactgttgaaggggagaagaatgcagtgccgtat 473

                                                                       
Query: 514 aatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgaggcggcctcct 573
           ||||| || || || ||||| ||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 474 aatgagaatacgtacctgctgagcgtgaaatccatgctgtatatattgagacggcctcct 533

                                                                       
Query: 574 atgaatttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacattctcaaa 633
            || |||| |||||||||||||| || |||||| |||||||||| |||||||| || |||
Sbjct: 534 ttgcattttgaggattttgtgaagagccacttccgcaagcgtggtcactacatccttaaa 593

                                   
Query: 634 gcttgtgaggcctacttgcaagga 657
           || |||||||| || |||||||||
Sbjct: 594 gcctgtgaggcatatttgcaagga 617

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  367 bits (185), Expect = 3e-98
 Identities = 278/309 (89%)
 Strand = Plus / Plus

                                                                           
Query: 264     gtcggcatactatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaa 323
               |||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 1425619 gtcggcgtactatcattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaa 1425678

                                                                           
Query: 324     ggtttgtttaagcctcttaaatacttggactggcagagggaatgaagtatgggatccatc 383
               ||| || ||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1425679 ggtctgcttaagtctcttgaatacctggacgggcagagggaatgaagtatgggatccatc 1425738

                                                                           
Query: 384     ctcatctagtattctccaagtactagtctcacttcagggactagttctcaatgaaaagcc 443
                ||||| |||||||||||||| || || |||||||||||  | ||||| |||||||||||
Sbjct: 1425739 atcatccagtattctccaagtcctggtttcacttcagggcttggttctaaatgaaaagcc 1425798

                                                                           
Query: 444     ctatttcaatgaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgc 503
                ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1425799 ttattttaatgaagctggctatgagaagcaagttggtactgttgaaggggagaagaatgc 1425858

                                                                           
Query: 504     actgccatacaatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgag 563
               | ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 1425859 attgccatataatgagaacacatatctgctgagcttgaaatccatgttgtatatcctgag 1425918

                        
Query: 564     gcggcctcc 572
               ||| |||||
Sbjct: 1425919 gcgacctcc 1425927



 Score =  186 bits (94), Expect = 6e-44
 Identities = 130/142 (91%)
 Strand = Plus / Plus

                                                                           
Query: 123     agattatatttatgtgagggtatttgaagatcgtatggatctcattagagctgtgattat 182
               ||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 1425354 agattatatttatgttagggtatttgaggatcgaatggacctcataagagccgtgattat 1425413

                                                                           
Query: 183     tggagcaagtggcacaccataccaagatggcctattcttctttgacttctaccttccacc 242
               |||||||||||| ||||||||||||||||| || |||||||| |||||| ||||||||||
Sbjct: 1425414 tggagcaagtggaacaccataccaagatggtcttttcttcttcgacttccaccttccacc 1425473

                                     
Query: 243     tgagtttccacaagctcctccg 264
               |||||||||||||| |||||||
Sbjct: 1425474 tgagtttccacaagttcctccg 1425495



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 578     atttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacattctcaaagctt 637
               |||||||||| ||||  || || ||||||| |||||||||  | ||||||||||||||||
Sbjct: 1426273 atttcgaggactttgcaaagagccacttctccaagcgtggcaaatacattctcaaagctt 1426332

                                  
Query: 638     gtgaggcctacttgcaagg 656
               |||||||||| ||||||||
Sbjct: 1426333 gtgaggcctatttgcaagg 1426351

to top

>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0037C04
          Length = 137879

 Score =  367 bits (185), Expect = 3e-98
 Identities = 278/309 (89%)
 Strand = Plus / Plus

                                                                          
Query: 264    gtcggcatactatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaa 323
              |||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 123670 gtcggcgtactatcattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaa 123729

                                                                          
Query: 324    ggtttgtttaagcctcttaaatacttggactggcagagggaatgaagtatgggatccatc 383
              ||| || ||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 123730 ggtctgcttaagtctcttgaatacctggacgggcagagggaatgaagtatgggatccatc 123789

                                                                          
Query: 384    ctcatctagtattctccaagtactagtctcacttcagggactagttctcaatgaaaagcc 443
               ||||| |||||||||||||| || || |||||||||||  | ||||| |||||||||||
Sbjct: 123790 atcatccagtattctccaagtcctggtttcacttcagggcttggttctaaatgaaaagcc 123849

                                                                          
Query: 444    ctatttcaatgaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgc 503
               ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 123850 ttattttaatgaagctggctatgagaagcaagttggtactgttgaaggggagaagaatgc 123909

                                                                          
Query: 504    actgccatacaatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgag 563
              | ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 123910 attgccatataatgagaacacatatctgctgagcttgaaatccatgttgtatatcctgag 123969

                       
Query: 564    gcggcctcc 572
              ||| |||||
Sbjct: 123970 gcgacctcc 123978



 Score =  186 bits (94), Expect = 6e-44
 Identities = 130/142 (91%)
 Strand = Plus / Plus

                                                                          
Query: 123    agattatatttatgtgagggtatttgaagatcgtatggatctcattagagctgtgattat 182
              ||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 123405 agattatatttatgttagggtatttgaggatcgaatggacctcataagagccgtgattat 123464

                                                                          
Query: 183    tggagcaagtggcacaccataccaagatggcctattcttctttgacttctaccttccacc 242
              |||||||||||| ||||||||||||||||| || |||||||| |||||| ||||||||||
Sbjct: 123465 tggagcaagtggaacaccataccaagatggtcttttcttcttcgacttccaccttccacc 123524

                                    
Query: 243    tgagtttccacaagctcctccg 264
              |||||||||||||| |||||||
Sbjct: 123525 tgagtttccacaagttcctccg 123546



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                          
Query: 578    atttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacattctcaaagctt 637
              |||||||||| ||||  || || ||||||| |||||||||  | ||||||||||||||||
Sbjct: 124324 atttcgaggactttgcaaagagccacttctccaagcgtggcaaatacattctcaaagctt 124383

                                 
Query: 638    gtgaggcctacttgcaagg 656
              |||||||||| ||||||||
Sbjct: 124384 gtgaggcctatttgcaagg 124402

to top

>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score =  367 bits (185), Expect = 3e-98
 Identities = 278/309 (89%)
 Strand = Plus / Plus

                                                                         
Query: 264   gtcggcatactatcattctggcggcttgcgtgtaaatccaaacctttatgtggatgggaa 323
             |||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct: 75240 gtcggcgtactatcattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaa 75299

                                                                         
Query: 324   ggtttgtttaagcctcttaaatacttggactggcagagggaatgaagtatgggatccatc 383
             ||| || ||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 75300 ggtctgcttaagtctcttgaatacctggacgggcagagggaatgaagtatgggatccatc 75359

                                                                         
Query: 384   ctcatctagtattctccaagtactagtctcacttcagggactagttctcaatgaaaagcc 443
              ||||| |||||||||||||| || || |||||||||||  | ||||| |||||||||||
Sbjct: 75360 atcatccagtattctccaagtcctggtttcacttcagggcttggttctaaatgaaaagcc 75419

                                                                         
Query: 444   ctatttcaatgaagctggatatgagaagcaagtcggtactgttgaaggggagaagaatgc 503
              ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75420 ttattttaatgaagctggctatgagaagcaagttggtactgttgaaggggagaagaatgc 75479

                                                                         
Query: 504   actgccatacaatgaaaacacatatctgctaagcgtgaaatccatgttgtatatcttgag 563
             | ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 75480 attgccatataatgagaacacatatctgctgagcttgaaatccatgttgtatatcctgag 75539

                      
Query: 564   gcggcctcc 572
             ||| |||||
Sbjct: 75540 gcgacctcc 75548



 Score =  186 bits (94), Expect = 6e-44
 Identities = 130/142 (91%)
 Strand = Plus / Plus

                                                                         
Query: 123   agattatatttatgtgagggtatttgaagatcgtatggatctcattagagctgtgattat 182
             ||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 74975 agattatatttatgttagggtatttgaggatcgaatggacctcataagagccgtgattat 75034

                                                                         
Query: 183   tggagcaagtggcacaccataccaagatggcctattcttctttgacttctaccttccacc 242
             |||||||||||| ||||||||||||||||| || |||||||| |||||| ||||||||||
Sbjct: 75035 tggagcaagtggaacaccataccaagatggtcttttcttcttcgacttccaccttccacc 75094

                                   
Query: 243   tgagtttccacaagctcctccg 264
             |||||||||||||| |||||||
Sbjct: 75095 tgagtttccacaagttcctccg 75116



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                         
Query: 578   atttcgaggattttgtgaaaagtcacttctgcaagcgtgggcactacattctcaaagctt 637
             |||||||||| ||||  || || ||||||| |||||||||  | ||||||||||||||||
Sbjct: 75894 atttcgaggactttgcaaagagccacttctccaagcgtggcaaatacattctcaaagctt 75953

                                
Query: 638   gtgaggcctacttgcaagg 656
             |||||||||| ||||||||
Sbjct: 75954 gtgaggcctatttgcaagg 75972

to top

>ref|XM_612946.2| PREDICTED: Bos taurus similar to Baculoviral IAP repeat-containing
           protein 6 (Ubiquitin-conjugating BIR-domain enzyme
           apollon) (LOC533514), mRNA
          Length = 2857

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 298 aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaatac 347
           |||||||||||||||   ||||| ||||||||||||||| ||||||||||
Sbjct: 640 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaatac 689

to top

>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence
          Length = 114206

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 157   atggatctcattagagctgtgattattggagca 189
             ||||||||||| |||||||||||||||||||||
Sbjct: 96259 atggatctcatgagagctgtgattattggagca 96227

to top

>ref|XM_515396.1| PREDICTED: Pan troglodytes LOC459141 (LOC459141), mRNA
          Length = 2577

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 298  aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
            |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 995  aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 1041

to top

>ref|NM_016252.2| Homo sapiens baculoviral IAP repeat-containing 6 (apollon) (BIRC6),
             mRNA
          Length = 16079

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 298   aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
             |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 14466 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 14512

to top

>dbj|AK023848.1| Homo sapiens cDNA FLJ13786 fis, clone PLACE4000654, highly similar to
            Mus musculus mRNA for ubiquitin conjugating enzyme
          Length = 6634

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 298  aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
            |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 5052 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 5098

to top

>dbj|AK023788.1| Homo sapiens cDNA FLJ13726 fis, clone PLACE3000059, highly similar to
            Mus musculus mRNA for ubiquitin conjugating enzyme
          Length = 4227

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 298  aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
            |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 2646 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 2692

to top

>gb|AF265555.1|AF265555 Homo sapiens ubiquitin-conjugating BIR-domain enzyme APOLLON mRNA,
             complete cds
          Length = 14490

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 298   aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
             |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 13882 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 13928

to top

>dbj|AB033115.2| Homo sapiens mRNA for KIAA1289 protein, partial cds
          Length = 9078

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 298  aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaa 344
            |||||||||||||||   ||||| ||||||||||||||| |||||||
Sbjct: 7780 aatccaaacctttataatgatggcaaggtttgtttaagcatcttaaa 7826

to top

>ref|NM_127245.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
            activating enzyme AT2G16920 mRNA, complete cds
          Length = 3665

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 113/142 (79%)
 Strand = Plus / Plus

                                                                        
Query: 343  aatacttggactggcagagggaatgaagtatgggatccatcctcatctagtattctccaa 402
            ||||| ||||| ||||| || |||||||| ||||||||    |||||||| || || |||
Sbjct: 2844 aatacctggacaggcaggggaaatgaagtctgggatcccaaatcatctagcatccttcaa 2903

                                                                        
Query: 403  gtactagtctcacttcagggactagttctcaatgaaaagccctatttcaatgaagctgga 462
            || || || ||||| |||||| | ||  | |||  |||||| |||||||||||||| || 
Sbjct: 2904 gttcttgtttcactccagggattggtgttgaattcaaagccttatttcaatgaagccggg 2963

                                  
Query: 463  tatgagaagcaagtcggtactg 484
            ||||| ||||| ||||| ||||
Sbjct: 2964 tatgataagcaggtcggaactg 2985



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 196  acaccataccaagatggcctattcttctttgacttctaccttccacctga 245
            ||||||||||||||||| || ||||| ||||| ||  |||||||| ||||
Sbjct: 2697 acaccataccaagatggtctcttcttttttgattttcaccttccatctga 2746

to top

>gb|AC005167.3| Arabidopsis thaliana chromosome 2 clone F12A24 map mi398, complete
             sequence
          Length = 93861

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 113/142 (79%)
 Strand = Plus / Minus

                                                                         
Query: 343   aatacttggactggcagagggaatgaagtatgggatccatcctcatctagtattctccaa 402
             ||||| ||||| ||||| || |||||||| ||||||||    |||||||| || || |||
Sbjct: 42331 aatacctggacaggcaggggaaatgaagtctgggatcccaaatcatctagcatccttcaa 42272

                                                                         
Query: 403   gtactagtctcacttcagggactagttctcaatgaaaagccctatttcaatgaagctgga 462
             || || || ||||| |||||| | ||  | |||  |||||| |||||||||||||| || 
Sbjct: 42271 gttcttgtttcactccagggattggtgttgaattcaaagccttatttcaatgaagccggg 42212

                                   
Query: 463   tatgagaagcaagtcggtactg 484
             ||||| ||||| ||||| ||||
Sbjct: 42211 tatgataagcaggtcggaactg 42190



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 196   acaccataccaagatggcctattcttctttgacttctaccttccacctga 245
             ||||||||||||||||| || ||||| ||||| ||  |||||||| ||||
Sbjct: 42569 acaccataccaagatggtctcttcttttttgattttcaccttccatctga 42520

to top

>ref|NM_179887.1| Arabidopsis thaliana ubiquitin conjugating enzyme AT2G33770 mRNA,
            complete cds
          Length = 4102

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 427  gttctcaatgaaaagccctatttcaatgaagctggatatgagaagca 473
            ||||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 3493 gttctgaatgagaagccttacttcaatgaagctggctatgataagca 3539

to top

>gb|AY091326.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2
            (At2g33770) mRNA, complete cds
          Length = 2755

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 427  gttctcaatgaaaagccctatttcaatgaagctggatatgagaagca 473
            ||||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 2341 gttctgaatgagaagccttacttcaatgaagctggctatgataagca 2387

to top

>gb|AY074292.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme
            (At2g33770) mRNA, complete cds
          Length = 4118

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 427  gttctcaatgaaaagccctatttcaatgaagctggatatgagaagca 473
            ||||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 3493 gttctgaatgagaagccttacttcaatgaagctggctatgataagca 3539

to top

>gb|AC144658.33| Medicago truncatula clone mth2-31g20, complete sequence
          Length = 119041

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 437   aaaagccctatttcaatgaagctggat 463
             ||||||| |||||||||||||||||||
Sbjct: 71656 aaaagccttatttcaatgaagctggat 71682

to top

>gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 map TEn5, complete
             sequence
          Length = 114144

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 427   gttctcaatgaaaagccctatttcaatgaagctggatatgagaagca 473
             ||||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 31305 gttctgaatgagaagccttacttcaatgaagctggctatgataagca 31259

to top

>gb|DQ027037.1| Arabidopsis thaliana ubiquitinating enzyme (At2g33770) mRNA, complete
            cds
          Length = 2724

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 427  gttctcaatgaaaagccctatttcaatgaagctggatatgagaagca 473
            ||||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 2341 gttctgaatgagaagccttacttcaatgaagctggctatgataagca 2387

to top

>ref|XM_848959.1| PREDICTED: Canis familiaris similar to Baculoviral IAP
             repeat-containing protein 6 (Ubiquitin-conjugating
             BIR-domain enzyme apollon) (LOC475718), mRNA
          Length = 15329

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 298   aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaatac 347
             |||||||||||||||   ||||| ||||| ||||||||  ||||||||||
Sbjct: 13742 aatccaaacctttataatgatggcaaggtgtgtttaagtatcttaaatac 13791

to top

>ref|XM_845913.1| PREDICTED: Canis familiaris similar to Baculoviral IAP
            repeat-containing protein 6 (Ubiquitin-conjugating
            BIR-domain enzyme apollon), transcript variant 2
            (LOC608617), mRNA
          Length = 3504

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 298  aatccaaacctttatgtggatgggaaggtttgtttaagcctcttaaatac 347
            |||||||||||||||   ||||| ||||| ||||||||  ||||||||||
Sbjct: 1917 aatccaaacctttataatgatggcaaggtgtgtttaagtatcttaaatac 1966

to top

>ref|XM_475903.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2982

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 427  gttctcaatgaaaagccctatttcaatgaagctggatatga 467
            |||||||||||||| || || |||||||| ||||| |||||
Sbjct: 2605 gttctcaatgaaaaaccttacttcaatgaggctggctatga 2645

to top

>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
              complete sequence
          Length = 144601

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 427    gttctcaatgaaaagccctatttcaatgaagctggatatga 467
              |||||||||||||| || || |||||||| ||||| |||||
Sbjct: 117064 gttctcaatgaaaaaccttacttcaatgaggctggctatga 117024

to top

>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23,
              complete sequence
          Length = 178472

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    taccagattatatttatgtga 139
              |||||||||||||||||||||
Sbjct: 148441 taccagattatatttatgtga 148421

to top

>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence
          Length = 144248

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 157    atggatctcattagagctgtgattattggagca 189
              ||||||||||| || ||||| ||||||||||||
Sbjct: 128217 atggatctcatgagggctgtaattattggagca 128249

to top

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 367     gaagtatgggatccatcctca 387
               |||||||||||||||||||||
Sbjct: 1506211 gaagtatgggatccatcctca 1506231

to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 427      gttctcaatgaaaagccctatttcaatgaagctggatatga 467
                |||||||||||||| || || |||||||| ||||| |||||
Sbjct: 27520934 gttctcaatgaaaaaccttacttcaatgaggctggctatga 27520894



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 196     acaccataccaagatggcctattcttctttga 227
               ||||| ||||| |||||||| |||||||||||
Sbjct: 7937603 acaccttaccatgatggccttttcttctttga 7937634

to top

>emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in linkage group 10, complete
              sequence
          Length = 211740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    taccagattatatttatgtga 139
              |||||||||||||||||||||
Sbjct: 153906 taccagattatatttatgtga 153926

to top

>emb|AL929192.16| Zebrafish DNA sequence from clone CH211-250E5 in linkage group 22,
             complete sequence
          Length = 112623

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   taccagattatatttatgtga 139
             |||||||||||||||||||||
Sbjct: 94759 taccagattatatttatgtga 94779

to top

>ref|XM_476232.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 196 acaccataccaagatggcctattcttctttga 227
           ||||| ||||| |||||||| |||||||||||
Sbjct: 793 acaccttaccatgatggccttttcttctttga 824

to top

>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0060G17, complete sequence
          Length = 174949

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 196   acaccataccaagatggcctattcttctttga 227
             ||||| ||||| |||||||| |||||||||||
Sbjct: 27193 acaccttaccatgatggccttttcttctttga 27224

to top

>ref|XM_455217.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F03036g predicted mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 469 aagcaagtcggtactgttga 488
           ||||||||||||||||||||
Sbjct: 472 aagcaagtcggtactgttga 491

to top

>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15,
              complete sequence
          Length = 162959

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 196    acaccataccaagatggcctattcttctttga 227
              ||||| ||||| |||||||| |||||||||||
Sbjct: 122378 acaccttaccatgatggccttttcttctttga 122409

to top

>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7,
              complete sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    atgcactgccatacaatgaa 519
              ||||||||||||||||||||
Sbjct: 103561 atgcactgccatacaatgaa 103542

to top

>gb|AC152405.15| Medicago truncatula clone mth2-49f2, complete sequence
          Length = 126818

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 172   gctgtgattattggagcaagtggcacaccataccaagatggcctattcttctttga 227
             ||||||||||||||||||   || || || || || |||||||||||||| |||||
Sbjct: 18776 gctgtgattattggagcagagggaaccccttatcatgatggcctattcttttttga 18721

to top

>emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on chromosome 1 Contains
            the 5' end of the CDC42BPA gene for CDC42 binding protein
            kinase alpha (DMPK-like), a cathepsin B (CTSB)
            pseudogene, a novel pseudogene and a CpG island, complete
            sequence
          Length = 124156

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  tttcaatgaagctggatatg 466
            ||||||||||||||||||||
Sbjct: 3963 tttcaatgaagctggatatg 3944

to top

>emb|AL513550.9| Human DNA sequence from clone RP11-98I9 on chromosome 6 Contains the
             gene for hexaprenyldihydroxybenzoate methyltransferase,
             mitochondrial precursor (COQ3), the gene for SR rich
             protein (FLJ14992), the USP45 gene for ubiquitin specific
             protease 45, the 3' end of the gene for a novel protein
             similar to ubiquitin carboxyl-terminal hydrolase 16 (EC
             3.1.2.15) and 2 CpG islands, complete sequence
          Length = 127905

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ctggcagagggaatgaagta 372
             ||||||||||||||||||||
Sbjct: 55486 ctggcagagggaatgaagta 55505

to top

>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3 Contains
              part of a novel gene (FLJ32928), two novel genes, and the
              5' end of the gene for androgen induced protein (AIG-1,
              CGI-103) (includes FLJ10485). Contains a CpG island,
              complete sequence
          Length = 137947

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    atgtgagggtatttgaagat 153
              ||||||||||||||||||||
Sbjct: 106279 atgtgagggtatttgaagat 106260

to top

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    aagcaagtcggtactgttga 488
              ||||||||||||||||||||
Sbjct: 283968 aagcaagtcggtactgttga 283949

to top

>gb|AC144724.9| Medicago truncatula clone mth2-7g10, complete sequence
          Length = 106731

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 172   gctgtgattattggagcaagtggcacaccataccaagatggcctattcttctttga 227
             ||||||||||||||||||   || || || || || |||||||||||||| |||||
Sbjct: 21507 gctgtgattattggagcagagggaaccccttatcatgatggcctattcttttttga 21562

to top

>dbj|AK027751.1| Homo sapiens cDNA FLJ14845 fis, clone PLACE1000308
          Length = 1939

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 ctggcagagggaatgaagta 372
           ||||||||||||||||||||
Sbjct: 829 ctggcagagggaatgaagta 810

to top

>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 543     atccatgttgtatatcttga 562
               ||||||||||||||||||||
Sbjct: 1658780 atccatgttgtatatcttga 1658799

to top

>gb|AC079402.5| Homo sapiens BAC clone RP11-597E15 from 2, complete sequence
          Length = 86973

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   acctaccagattatatttat 135
             ||||||||||||||||||||
Sbjct: 50612 acctaccagattatatttat 50593

to top

>gb|AC093381.5| Homo sapiens BAC clone RP11-436J10 from 2, complete sequence
          Length = 121777

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    tcctcatctagtattctcca 401
              ||||||||||||||||||||
Sbjct: 110101 tcctcatctagtattctcca 110082

to top

>gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147103

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   atacaatgaaaacacatatc 529
             ||||||||||||||||||||
Sbjct: 33656 atacaatgaaaacacatatc 33675

to top

>emb|AL954215.1| Pan troglodytes chromosome 22 clone RP43-034B14 map 22q22.11, complete
              sequence
          Length = 153187

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 340    ttaaatacttggactggcagagggaatg 367
              |||||||||||| ||||| |||||||||
Sbjct: 142679 ttaaatacttgggctggctgagggaatg 142652

to top

>dbj|AK069430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A14, full
           insert sequence
          Length = 1769

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 196 acaccataccaagatggcctattcttctttga 227
           ||||| ||||| |||||||| |||||||||||
Sbjct: 747 acaccttaccatgatggccttttcttctttga 778

to top

>dbj|AK115981.1| Ciona intestinalis cDNA, clone:citb002p15, full insert sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 593 tgaaaagtcacttctgcaag 612
           ||||||||||||||||||||
Sbjct: 45  tgaaaagtcacttctgcaag 64

to top

>emb|AL390860.10| Human DNA sequence from clone RP11-656O22 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene, an olfactory
             receptor pseudogene, the OR13G1 gene for olfactory
             receptor, family 13, subfamily G, member 1 and two CpG
             islands, complete sequence
          Length = 72354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   tatatttatgtgagggtatt 146
             ||||||||||||||||||||
Sbjct: 46379 tatatttatgtgagggtatt 46398

to top

>gb|AC087242.10| Homo sapiens 12 BAC RP11-361I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114097

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   gtgaaatccatgttgtatat 557
             ||||||||||||||||||||
Sbjct: 32800 gtgaaatccatgttgtatat 32781


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,779,718
Number of Sequences: 3902068
Number of extensions: 5779718
Number of successful extensions: 94412
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 94224
Number of HSP's gapped (non-prelim): 188
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result