ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags20d06 |
|---|---|
| Clone Library Name | barley_pub |
>SPC18_MOUSE (Q9R0P6) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) (Sid 2895) Length = 179 Score = 172 bits (436), Expect = 3e-43 Identities = 85/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q+ + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC18_PONPY (Q5R9C7) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 172 bits (435), Expect = 4e-43 Identities = 85/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q + + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC18_HUMAN (P67812) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 172 bits (435), Expect = 4e-43 Identities = 85/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q + + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC18_CANFA (P67811) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 172 bits (435), Expect = 4e-43 Identities = 85/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q + + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC18_BOVIN (P67810) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 172 bits (435), Expect = 4e-43 Identities = 85/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q + + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC18_RAT (P42667) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)| (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18) (SEC11-like 1) Length = 179 Score = 171 bits (433), Expect = 7e-43 Identities = 84/139 (60%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Frame = +2 Query: 8 DQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 187 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLM+ TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMLITGSESPIVVVLSGSMEPAFHRG 64 Query: 188 DILFL-RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDR 364 D+LFL ++PIR GEIVVF ++GREIPIVHRV+K+HE+Q+ + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123 Query: 365 LLYAHGQLWLQQHHIMGRA 421 LY GQ WL++ ++GRA Sbjct: 124 GLYKQGQHWLEKKDVVGRA 142
>SPC21_RAT (Q9WTR7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 166 bits (420), Expect = 2e-41 Identities = 83/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 23 IRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL 202 +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL Sbjct: 21 LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFL 80 Query: 203 -RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAH 379 ++PIR GEIVVF V+GR+IPIVHRVIKVHE+ ++ ++ LTKGDNN DDR LY Sbjct: 81 TNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKE 139 Query: 380 GQLWLQQHHIMGRA 421 GQ WL++ ++GRA Sbjct: 140 GQNWLEKKDVVGRA 153
>SPC21_MOUSE (Q9D8V7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 166 bits (420), Expect = 2e-41 Identities = 83/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 23 IRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL 202 +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL Sbjct: 21 LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFL 80 Query: 203 -RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAH 379 ++PIR GEIVVF V+GR+IPIVHRVIKVHE+ ++ ++ LTKGDNN DDR LY Sbjct: 81 TNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKE 139 Query: 380 GQLWLQQHHIMGRA 421 GQ WL++ ++GRA Sbjct: 140 GQNWLEKKDVVGRA 153
>SPC21_CANFA (P13679) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 166 bits (420), Expect = 2e-41 Identities = 83/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 23 IRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL 202 +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL Sbjct: 21 LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFL 80 Query: 203 -RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAH 379 ++PIR GEIVVF V+GR+IPIVHRVIKVHE+ ++ ++ LTKGDNN DDR LY Sbjct: 81 TNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKE 139 Query: 380 GQLWLQQHHIMGRA 421 GQ WL++ ++GRA Sbjct: 140 GQNWLEKKDVVGRA 153
>SPC21_PONPY (Q5RC30) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 165 bits (417), Expect = 5e-41 Identities = 82/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 23 IRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL 202 ++ M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL Sbjct: 21 LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFL 80 Query: 203 -RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAH 379 ++PIR GEIVVF V+GR+IPIVHRVIKVHE+ ++ ++ LTKGDNN DDR LY Sbjct: 81 TNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKE 139 Query: 380 GQLWLQQHHIMGRA 421 GQ WL++ ++GRA Sbjct: 140 GQNWLEKKDVVGRA 153
>SPC21_HUMAN (Q9BY50) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)| (SPase 21 kDa subunit) (SPC21) (SEC11-like 3) Length = 191 Score = 165 bits (417), Expect = 5e-41 Identities = 82/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = +2 Query: 23 IRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFL 202 ++ M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VVVLSGSMEP F RGD+LFL Sbjct: 21 LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFL 80 Query: 203 -RMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAH 379 ++PIR GEIVVF V+GR+IPIVHRVIKVHE+ ++ ++ LTKGDNN DDR LY Sbjct: 81 TNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIKFLTKGDNNEVDDRGLYKE 139 Query: 380 GQLWLQQHHIMGRA 421 GQ WL++ ++GRA Sbjct: 140 GQNWLEKKDVVGRA 153
>SEC11_YEAST (P15367) Signal sequence-processing protein SEC11 (EC 3.4.-.-)| Length = 167 Score = 117 bits (293), Expect = 1e-26 Identities = 58/123 (47%), Positives = 86/123 (69%) Frame = +2 Query: 32 MQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLRMS 211 M LR L +++++ + SA + W+GL +AT S SP+VVVLSGSMEP F+RGDILFL Sbjct: 1 MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR 60 Query: 212 KEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRLLYAHGQLW 391 + G++VV+ V+G++IPIVHRV++ H + +LTKGDNN G+D LYA+ +++ Sbjct: 61 NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIY 119 Query: 392 LQQ 400 L + Sbjct: 120 LNK 122
>LEPW_BACSU (P54506) Signal peptidase I W (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 190 Score = 40.4 bits (93), Expect = 0.002 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 10/108 (9%) Frame = +2 Query: 68 LGMIVTSALIIWKGLMVATGSES--PVVV------VLSGSMEPGFKRGDILFLR--MSKE 217 L +I+ + +I+ ++++T S P V VLSGSMEP F G ++ ++ + Sbjct: 8 LYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSGSMEPEFNTGSLILVKEITDVK 67 Query: 218 PIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDD 361 ++ G+++ F D + HR++ + ++ + TKGDNN D Sbjct: 68 ELQKGDVITFMQDA-NTAVTHRIVDI--TKQGDHLLFKTKGDNNAAAD 112
>KS6A6_HUMAN (Q9UK32) Ribosomal protein S6 kinase alpha-6 (EC 2.7.11.1)| (S6K-alpha 6) (90 kDa ribosomal protein S6 kinase 6) (p90-RSK 6) (Ribosomal S6 kinase 4) (RSK-4) (pp90RSK4) Length = 745 Score = 35.4 bits (80), Expect = 0.056 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = +2 Query: 173 GFKRGDILFLRMSKEPIRTGEIVVFNVDG--REIPIVHRVIKVHERQESAEVDIL-TKGD 343 G G++ L+M EP+ GE + +G +EIPI H V + +E+ + A+ ++L G Sbjct: 22 GASSGEVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADPAQFELLKVLGQ 81 Query: 344 NNFG 355 +FG Sbjct: 82 GSFG 85
>FBX42_PONPY (Q5RDA9) F-box only protein 42| Length = 717 Score = 35.0 bits (79), Expect = 0.074 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 270 GISRPSTLKTTISPVRMGSLLMRKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 106 G RP + T S R GSL + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>FBX42_HUMAN (Q6P3S6) F-box only protein 42| Length = 717 Score = 35.0 bits (79), Expect = 0.074 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 270 GISRPSTLKTTISPVRMGSLLMRKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 106 G RP + T S R GSL + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>LCMT2_MOUSE (Q8BYR1) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| (p21WAF1/CIP1 promoter-interacting protein) Length = 686 Score = 33.9 bits (76), Expect = 0.16 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = -2 Query: 320 LQHFPGVHEP*SHGEQLEFHDHQH*KQLFLQYGWVLCS 207 LQHF +H P HG +L F D + +Q FLQ GW CS Sbjct: 232 LQHFQRLHSP-LHGLEL-FPDVKAQRQRFLQAGWTACS 267
>FBX42_MOUSE (Q6PDJ6) F-box only protein 42| Length = 717 Score = 32.7 bits (73), Expect = 0.37 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 270 GISRPSTLKTTISPVRMGSLLMRKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 106 G RP + T S R GSL + SP+LN G++ P G SL PV ++P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGASLDSPVQVVSP 465
>GPDA_PARUW (Q6MF42) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 333 Score = 31.6 bits (70), Expect = 0.81 Identities = 19/46 (41%), Positives = 25/46 (54%) Frame = +2 Query: 14 VESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMVATGSESPVVVV 151 VES+ S LR V Q+ SLG+ +I KG+ TG P VV+ Sbjct: 75 VESVTSAGLRSVFEQVRSLGLPNCPIVITSKGIEQDTGMILPEVVI 120
>LCMT2_RAT (Q5XIA3) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)| Length = 686 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = -2 Query: 320 LQHFPGVHEP*SHGEQLEFHDHQH*KQLFLQYGWVLCS 207 LQHF ++ P HG +L F D + +Q FLQ GW CS Sbjct: 232 LQHFRRLNSP-LHGLEL-FPDVEAQRQRFLQAGWTTCS 267
>5HT7R_XENLA (Q91559) 5-hydroxytryptamine 7 receptor (5-HT-7) (Serotonin| receptor 7) Length = 425 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = -3 Query: 202 QKQDITPFESRLHATRKNHDHRGLTPSRNHQPLPYDQCRRN----NHTEADDLGEHL 44 Q +T LH+ + + DH+ L PS P + ++ NHTE D G+ L Sbjct: 6 QPSHLTDTNLSLHSAKPSSDHQNLLPSEFMTERPLNTTEQDLTALNHTEKPDCGKEL 62
>GLMS_PSESM (Q87TT8) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 610 Score = 30.0 bits (66), Expect = 2.4 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 11/80 (13%) Frame = +2 Query: 113 MVATGSESPVVVVLSGSMEPGFKRGDILFLRMSKE-----------PIRTGEIVVFNVDG 259 ++A S SP+V+ + M F D L LR + IR + ++ VDG Sbjct: 170 LLAARSGSPLVIGVG--MGENFLASDQLALRQVTDRFMYLEEGDIAEIRRDSVQIWTVDG 227 Query: 260 REIPIVHRVIKVHERQESAE 319 +P+V V++ HE E+A+ Sbjct: 228 --LPVVREVVQYHEGAEAAD 245
>GATB_RICCN (Q92J76) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 483 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 158 GSMEPGFKRGDI-LFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILT 334 G ME G R D + +R S EP+ T + + I + +IK E + +VD+L Sbjct: 193 GDMEKGSMRCDANISVRRSGEPLGT------RCEIKNINSIRNIIKAIEFEAKRQVDLLE 246 Query: 335 KGDNNFGDDRLLYA 376 G+ + RL A Sbjct: 247 SGEKIIQETRLFNA 260
>US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein| Length = 819 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -3 Query: 157 RKNHDHRGLTPSRNHQPLPYDQCRRNNHTEADDLGEHLAELHR 29 RKNH+H + SRN P Q RR + E +H AE R Sbjct: 407 RKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQR 449
>PEPX_LACRH (Q9RDW6) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro| dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 797 Score = 29.3 bits (64), Expect = 4.0 Identities = 21/82 (25%), Positives = 40/82 (48%) Frame = -3 Query: 367 QSVIPEIVVTFCEDVNFSTFLAFMNLNHTVNNWNFTTINIKNNYFSSTDGFFAHAQKQDI 188 + V+P ++V ++V T+ A+ + + TT N+K ++ S+TD F HA Sbjct: 552 EQVLPNVLVQ--DNVTPQTWSAYSDFANPAAEHVTTTANLKTDFESATDQFSDHA----- 604 Query: 187 TPFESRLHATRKNHDHRGLTPS 122 T + H T + + +TP+ Sbjct: 605 TATFTAQHDTSASFEKAIITPN 626
>ENGA_RALSO (Q8Y026) GTP-binding protein engA| Length = 447 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +2 Query: 131 ESPVVVVLSGSMEPGFKRGDILFL-RMSKEPIRTGEIVVFNVDGR 262 E P + + +G EP K G + + + +++ + ++V+F VDGR Sbjct: 49 ERPFIAIDTGGFEPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGR 93
>RCL1_YEAST (Q08096) RNA 3'-terminal phosphate cyclase-like protein| Length = 367 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 110 LMVATGSESPVVV--VLSGSMEPGFKRGDILFLRMSKEPIRTGEIVVFNVDGREI 268 +++AT S P+ + + SG + PG K ++ FLR+ E + G ++ + G + Sbjct: 21 IVLATLSGKPIKIEKIRSGDLNPGLKDYEVSFLRLI-ESVTNGSVIEISYTGTTV 74
>QUEA_DESVH (Q725S3) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 371 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = +2 Query: 155 SGSMEPGFKRGDILFLRMSKEPIRTGEIVVFNVDGREIPIVHR 283 SG++EPG+ ++ L + +P+R G+ + F D R + +VH+ Sbjct: 107 SGTVEPGWCVAEVEGLLRASKPLRPGDTLSFGDDLR-VEVVHK 148
>EFG_AZOSE (Q5P335) Elongation factor G (EF-G)| Length = 698 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +2 Query: 185 GDILFLRMSKEPIRTGEIVVFNVDGREIPIVHRVIKVH--ERQESAEV 322 G + F+R+ +++GE V+ +V G++ + R++++H ERQE EV Sbjct: 329 GQLTFVRVYSGVLKSGETVLNSVKGKK-ERIGRILQMHANERQEIKEV 375
>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin| D(3) 25-hydroxylase) Length = 499 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 5 GDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMV 118 G+ S LR V++ + S GMI TS + W L++ Sbjct: 286 GNPESSFNDENLRLVVAHLFSAGMITTSTTLAWALLLM 323
>UVRB_THEMA (Q9X282) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 664 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +2 Query: 233 EIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNFGDDRL-------LYAHGQL 388 E+ V G+ +V+ ++KV ER E A V +LTK + L LY H +L Sbjct: 417 EVEVRPTAGQVDDLVNEIVKVKERGERALVTVLTKKTAELLSEHLTELGIRSLYLHSEL 475
>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)| Length = 497 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 5 GDQVESIRSMQLRQVLSQIISLGMIVTSALIIWKGLMV 118 G+ S LR V++ + S GM+ TS + W GL++ Sbjct: 284 GNPESSFNEENLRMVVADLFSAGMVTTSTTLAW-GLLL 320 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,209,538 Number of Sequences: 219361 Number of extensions: 1243148 Number of successful extensions: 4503 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4477 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
