| Clone Name | bags20d06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E09, full insert sequence Length = 1517 Score = 450 bits (227), Expect = e-123 Identities = 362/407 (88%) Strand = Plus / Plus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggtatg 76 ||||| ||||||||||||||| ||||||||||||| | || ||||||||| | |||||| Sbjct: 270 gagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtatg 329 Query: 77 attgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtcc 136 |||||||| || |||||||||||||||||||| || || |||| || || ||||| || Sbjct: 330 attgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatct 389 Query: 137 ccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcctg 196 || ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct: 390 ccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgacatcctg 449 Query: 197 tttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttgat 256 ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 450 tttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgat 509 Query: 257 ggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtgct 316 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 510 ggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggagagtgca 569 Query: 317 gaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacgcg 376 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 570 gaagttgacatcctcacaaaaggtgataacaattttggggatgaccgacttctgtatgca 629 Query: 377 cacggacagctgtggcttcagcagcatcacatcatggggcgggctgt 423 || || ||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 630 catgggcagctttggcttcagcaacatcatattatggggcgagctgt 676
>dbj|AK106215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H01, full insert sequence Length = 1063 Score = 450 bits (227), Expect = e-123 Identities = 362/407 (88%) Strand = Plus / Plus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggtatg 76 ||||| ||||||||||||||| ||||||||||||| | || ||||||||| | |||||| Sbjct: 259 gagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtatg 318 Query: 77 attgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtcc 136 |||||||| || |||||||||||||||||||| || || |||| || || ||||| || Sbjct: 319 attgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatct 378 Query: 137 ccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcctg 196 || ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct: 379 ccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgacatcctg 438 Query: 197 tttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttgat 256 ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 439 tttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgat 498 Query: 257 ggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtgct 316 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 499 ggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggagagtgca 558 Query: 317 gaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacgcg 376 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 559 gaagttgacatcctcacaaaaggtgataacaattttggggatgaccgacttctgtatgca 618 Query: 377 cacggacagctgtggcttcagcagcatcacatcatggggcgggctgt 423 || || ||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 619 catgggcagctttggcttcagcaacatcatattatggggcgagctgt 665
>dbj|AK102635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099N11, full insert sequence Length = 1065 Score = 450 bits (227), Expect = e-123 Identities = 362/407 (88%) Strand = Plus / Plus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggtatg 76 ||||| ||||||||||||||| ||||||||||||| | || ||||||||| | |||||| Sbjct: 261 gagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtatg 320 Query: 77 attgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtcc 136 |||||||| || |||||||||||||||||||| || || |||| || || ||||| || Sbjct: 321 attgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatct 380 Query: 137 ccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcctg 196 || ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct: 381 ccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgacatcctg 440 Query: 197 tttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttgat 256 ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 441 tttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgat 500 Query: 257 ggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtgct 316 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 501 ggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggagagtgca 560 Query: 317 gaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacgcg 376 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 561 gaagttgacatcctcacaaaaggtgataacaattttggggatgaccgacttctgtatgca 620 Query: 377 cacggacagctgtggcttcagcagcatcacatcatggggcgggctgt 423 || || ||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 621 catgggcagctttggcttcagcaacatcatattatggggcgagctgt 667
>dbj|AK058911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G10, full insert sequence Length = 1083 Score = 450 bits (227), Expect = e-123 Identities = 362/407 (88%) Strand = Plus / Plus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggtatg 76 ||||| ||||||||||||||| ||||||||||||| | || ||||||||| | |||||| Sbjct: 292 gagtcaatccgctcgatgcaggtccgccaggtgctggcgcaaatcatcagcttaggtatg 351 Query: 77 attgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtcc 136 |||||||| || |||||||||||||||||||| || || |||| || || ||||| || Sbjct: 352 attgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagtgaatct 411 Query: 137 ccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcctg 196 || ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||| Sbjct: 412 ccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgacatcctg 471 Query: 197 tttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttgat 256 ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 472 tttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaatgttgat 531 Query: 257 ggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtgct 316 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 532 ggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggagagtgca 591 Query: 317 gaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacgcg 376 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 592 gaagttgacatcctcacaaaaggtgataacaattttggggatgaccgacttctgtatgca 651 Query: 377 cacggacagctgtggcttcagcagcatcacatcatggggcgggctgt 423 || || ||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 652 catgggcagctttggcttcagcaacatcatattatggggcgagctgt 698
>dbj|AK071238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085B09, full insert sequence Length = 1035 Score = 416 bits (210), Expect = e-113 Identities = 363/414 (87%) Strand = Plus / Plus Query: 13 ggtggagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcgg 72 ||||||||||||||||||||| ||| ||||||| || ||| | || |||||||||||||| Sbjct: 112 ggtggagtcgatccgctcgatacagatccgccaagtcctcgcgcaaatcatcagcctcgg 171 Query: 73 tatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtga 132 |||||||||||| |||||| |||||||||||||||| ||||||||||| || ||||| || Sbjct: 172 tatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagcga 231 Query: 133 gtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatat 192 |||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 232 gtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggggcgatat 291 Query: 193 cctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgt 252 ||| ||| | | |||||||||||| || ||||| || ||||| ||||||||||| || | Sbjct: 292 cctttttctacacatgagcaaagatcctatccgcacaggagagatagttgttttcaacat 351 Query: 253 tgatggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaag 312 |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 352 tgatggccgtgaaattccaattgttcaccgtgtgattaaggtccatgaacgcgaggaaag 411 Query: 313 tgctgaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgta 372 |||||||||||| |||||||| |||||||| || ||||| ||||| ||||| || || || Sbjct: 412 tgctgaagttgatatcctcacgaaaggtgataataattttggggacgaccgtcttcttta 471 Query: 373 cgcgcacggacagctgtggcttcagcagcatcacatcatggggcgggctgtagg 426 || || || ||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 472 tgcacatgggcagctttggcttcaccaacatcacattatgggacgggctgtagg 525
>gb|AY103758.1| Zea mays PCO086041 mRNA sequence Length = 1028 Score = 357 bits (180), Expect = 2e-95 Identities = 345/400 (86%) Strand = Plus / Plus Query: 15 tggagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggta 74 |||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||| Sbjct: 171 tggagtcgatccgctccatgcagatccgccaagtgctcatgcagatcatcagcctcggta 230 Query: 75 tgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagt 134 |||||||||| || ||||| |||||||||||||| ||||| ||| || ||||| |||| Sbjct: 231 tgattgttacctctgcattaatcatatggaagggtttgatagttttcacggggagcgagt 290 Query: 135 ccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcc 194 | || || || ||||| || || |||||||||||||||||||| |||||||||||||||| Sbjct: 291 caccagttgtagtggtgctctcgggtagcatggagcctggatttaaaaggggtgatatcc 350 Query: 195 tgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttg 254 ||||||||| ||||||||||| || || || || ||||||||||||||||| ||||| | Sbjct: 351 tgtttttgcatatgagcaaagatcctattcgcacaggagaaatagttgttttcaatgtcg 410 Query: 255 atggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtg 314 |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| | || Sbjct: 411 atggtcgtgagattccaattgttcaccgagtgattaaggtccatgaacgtcaggacactg 470 Query: 315 ctgaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacg 374 | ||||| ||||||||||| ||||||||||| ||||| |||||||||||||| | || | Sbjct: 471 cagaagtggacatcctcaccaaaggtgacaataattttggggatgaccgactattatatg 530 Query: 375 cgcacggacagctgtggcttcagcagcatcacatcatggg 414 | || || ||||| ||||| ||||| |||||||| ||||| Sbjct: 531 cacatgggcagctttggctccagcaacatcacattatggg 570
>gb|BT018041.1| Zea mays clone EL01N0531A03.c mRNA sequence Length = 869 Score = 341 bits (172), Expect = 1e-90 Identities = 307/352 (87%) Strand = Plus / Plus Query: 15 tggagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcggta 74 |||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||| Sbjct: 138 tggagtcgatccgctccatgcagatccgccaagtgctcatgcagatcatcagcctcggta 197 Query: 75 tgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgagt 134 |||||||||| || ||||| |||||||||||||| ||||| ||| | ||||| |||| Sbjct: 198 tgattgttacctctgcattaatcatatggaagggtttgatagttttcgcggggagcgagt 257 Query: 135 ccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgatatcc 194 | || || || ||||| || || |||||||||||||||||||| |||||||||||||||| Sbjct: 258 caccagttgtagtggtgctctcgggtagcatggagcctggatttaaaaggggtgatatcc 317 Query: 195 tgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaatgttg 254 ||||||||| ||||||||||| || || || || ||||||||||||||||| ||||| | Sbjct: 318 tgtttttgcatatgagcaaagatcctattcgcacaggagaaatagttgttttcaatgtcg 377 Query: 255 atggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtg 314 |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| | || Sbjct: 378 atggtcgtgagattccaattgttcaccgagtgattaaggtccatgaacgtcaggacactg 437 Query: 315 ctgaagttgacatcctcacaaaaggtgacaacaatttcggggatgaccgact 366 | ||||| ||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 438 cagaagtggacatcctcaccaaaggtgacaataattttggggatgaccgact 489
>ref|NM_185778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 337 bits (170), Expect = 2e-89 Identities = 245/270 (90%) Strand = Plus / Plus Query: 71 ggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagt 130 |||||||||||||| || |||||||||||||||||||| || || |||| || || ||| Sbjct: 133 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 192 Query: 131 gagtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggggtgat 190 || || || ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 193 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaagaggtgac 252 Query: 191 atcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttttaat 250 ||||||||||||| |||||||||||| || ||||| |||||||||||||||||||||||| Sbjct: 253 atcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgtttttaat 312 Query: 251 gttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttcatgaacgccaggaa 310 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 313 gttgatggccgtgaaattccaattgttcaccgtgtgatcaaggttcatgaacgccaggag 372 Query: 311 agtgctgaagttgacatcctcacaaaaggt 340 ||||| |||||||||||||||||||||||| Sbjct: 373 agtgcagaagttgacatcctcacaaaaggt 402 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 338 ggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacagctgtggcttcag 397 ||||| |||||||| |||||||||||||| ||||| || || || ||||| ||||||||| Sbjct: 454 ggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttcag 513 Query: 398 cagcatcacatcatggggcgggctgt 423 || ||||| || |||||||| ||||| Sbjct: 514 caacatcatattatggggcgagctgt 539 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgct 51 ||||| ||||||||||||||| ||||||||||||| Sbjct: 25 gagtcaatccgctcgatgcaggtccgccaggtgct 59
>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0082F22, complete sequence Length = 176038 Score = 149 bits (75), Expect = 9e-33 Identities = 105/115 (91%) Strand = Plus / Plus Query: 71 ggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagt 130 |||||||||||||| |||||| |||||||||||||||| ||||||||||| || ||||| Sbjct: 112480 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 112539 Query: 131 gagtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggg 185 |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 112540 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 112594 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 260 cgtgaaattccaattgttcaccgtgtgattaaggt 294 ||||||||||||||||||||||||||||||||||| Sbjct: 114177 cgtgaaattccaattgttcaccgtgtgattaaggt 114211 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 291 aggttcatgaacgccaggaaagtgctgaagttgacatcctcacaaaaggt 340 |||| ||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 114327 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 114376 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 13 ggtggagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcgg 72 ||||||||||||||||||||| ||| ||||||| || ||| | || |||||||||||||| Sbjct: 111829 ggtggagtcgatccgctcgatacagatccgccaagtcctcgcgcaaatcatcagcctcgg 111888 Query: 73 t 73 | Sbjct: 111889 t 111889 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 337 aggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacagctgtggcttca 396 |||||| || ||||| ||||| ||||| || || || || || || ||||| |||||||| Sbjct: 114516 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 114575 Query: 397 gcagcatcacatcatggggcgggctgtagg 426 || |||||||| ||||| ||||||||||| Sbjct: 114576 ccaacatcacattatgggacgggctgtagg 114605 Score = 46.1 bits (23), Expect = 0.093 Identities = 50/59 (84%) Strand = Plus / Plus Query: 188 gatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttt 246 |||||||| ||| | | |||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 113967 gatatcctttttctacacatgagcaaagatcctatccgcacaggagagatagttgtttt 114025
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 9e-33 Identities = 105/115 (91%) Strand = Plus / Plus Query: 71 ggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagt 130 |||||||||||||| |||||| |||||||||||||||| ||||||||||| || ||||| Sbjct: 13149703 ggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagc 13149762 Query: 131 gagtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaaggg 185 |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 13149763 gagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggg 13149817 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 260 cgtgaaattccaattgttcaccgtgtgattaaggt 294 ||||||||||||||||||||||||||||||||||| Sbjct: 13151400 cgtgaaattccaattgttcaccgtgtgattaaggt 13151434 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 291 aggttcatgaacgccaggaaagtgctgaagttgacatcctcacaaaaggt 340 |||| ||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 13151550 aggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggt 13151599 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 13 ggtggagtcgatccgctcgatgcagctccgccaggtgctctcccagatcatcagcctcgg 72 ||||||||||||||||||||| ||| ||||||| || ||| | || |||||||||||||| Sbjct: 13149052 ggtggagtcgatccgctcgatacagatccgccaagtcctcgcgcaaatcatcagcctcgg 13149111 Query: 73 t 73 | Sbjct: 13149112 t 13149112 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 337 aggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacagctgtggcttca 396 |||||| || ||||| ||||| ||||| || || || || || || ||||| |||||||| Sbjct: 13151739 aggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttca 13151798 Query: 397 gcagcatcacatcatggggcgggctgtagg 426 || |||||||| ||||| ||||||||||| Sbjct: 13151799 ccaacatcacattatgggacgggctgtagg 13151828 Score = 46.1 bits (23), Expect = 0.093 Identities = 50/59 (84%) Strand = Plus / Plus Query: 188 gatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgtttt 246 |||||||| ||| | | |||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 13151190 gatatcctttttctacacatgagcaaagatcctatccgcacaggagagatagttgtttt 13151248
>dbj|AK099911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D13, full insert sequence Length = 1489 Score = 137 bits (69), Expect = 3e-29 Identities = 269/335 (80%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 86 tcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtccccggtggtc 145 ||||||||||| ||||||||||| ||||| | ||| ||||||||||| || | || Sbjct: 164 tcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagtt 223 Query: 146 gtggttctttctggtagcatggagcctggattcaaaaggggtgatatcctgtttttgcgc 205 |||||||| |||| ||||||| || |||||| ||||||| |||||||||||||||| Sbjct: 224 gtggttctatctgaaagcatggggcttggatttgaaaggggggatatcctgtttttgcaa 283 Query: 206 atgagcaaagaacccatccgtactggagaaatagttgtttttaatgttgatggtcgtgaa 265 ||||||||| | || || || || ||||| ||||||||||| || |||||| |||||| Sbjct: 284 atgagcaaacaccctatacgaacaggagatatagttgttttcaa---tgatggccgtgaa 340 Query: 266 attccaattgttcaccgtgtgattaaggttcatgaacgccaggaaagtgctgaagttgac 325 |||||||| || || || || ||| ||||||| ||||| | ||| | ||| ||||||| Sbjct: 341 attccaatcgtccatcgcgttattgaggttcacgaacgacgggataatgcacaagttgat 400 Query: 326 atcctcacaaaaggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacag 385 ||||||||||||||||||||||| ||| |||||| | || ||| | || || ||| Sbjct: 401 ttcctcacaaaaggtgacaacaatcctatggacgaccgaattctttacacacatgggcag 460 Query: 386 ctgtggcttcagcagcatcacatcatggggcgggc 420 || ||||||||||| |||||||||||||| ||||| Sbjct: 461 ctttggcttcagcaacatcacatcatgggacgggc 495
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 184 gggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgt 243 |||||| ||||||||||||| |||||||||||| || ||||| ||||||||||||||||| Sbjct: 9269510 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 9269451 Query: 244 ttttaatgttgatg 257 |||||||||||||| Sbjct: 9269450 ttttaatgttgatg 9269437 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 71 ggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagt 130 |||||||||||||| || |||||||||||||||||||| || || |||| || || ||| Sbjct: 9270059 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 9270000 Query: 131 gagtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaag 183 || || || ||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 9269999 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 9269947 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 291 aggttcatgaacgccaggaaagtgctgaagttgacatcctcacaaaaggt 340 ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 9269209 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 9269160 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 337 aggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacagctgtggcttca 396 |||||| |||||||| |||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 9269009 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 9268950 Query: 397 gcagcatcacatcatggggcgggctgt 423 ||| ||||| || |||||||| ||||| Sbjct: 9268949 gcaacatcatattatggggcgagctgt 9268923 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 260 cgtgaaattccaattgttcaccgtgtgattaaggt 294 ||||||||||||||||||||||||||||| ||||| Sbjct: 9269336 cgtgaaattccaattgttcaccgtgtgatcaaggt 9269302 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgct 51 ||||| ||||||||||||||| ||||||||||||| Sbjct: 9271839 gagtcaatccgctcgatgcaggtccgccaggtgct 9271805
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 184 gggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgt 243 |||||| ||||||||||||| |||||||||||| || ||||| ||||||||||||||||| Sbjct: 36851 gggtgacatcctgtttttgcacatgagcaaagaccctatccgcactggagaaatagttgt 36792 Query: 244 ttttaatgttgatg 257 |||||||||||||| Sbjct: 36791 ttttaatgttgatg 36778 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 71 ggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagt 130 |||||||||||||| || |||||||||||||||||||| || || |||| || || ||| Sbjct: 37400 ggtatgattgttacctctgcattgatcatatggaagggtttaatagttgtaacaggtagt 37341 Query: 131 gagtccccggtggtcgtggttctttctggtagcatggagcctggattcaaaag 183 || || || ||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 37340 gaatctccagtggtggtggttctttctggtagcatggaacctggatttaaaag 37288 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 291 aggttcatgaacgccaggaaagtgctgaagttgacatcctcacaaaaggt 340 ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 36550 aggttcatgaacgccaggagagtgcagaagttgacatcctcacaaaaggt 36501 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 337 aggtgacaacaatttcggggatgaccgactgctgtacgcgcacggacagctgtggcttca 396 |||||| |||||||| |||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 36350 aggtgataacaattttggggatgaccgacttctgtatgcacatgggcagctttggcttca 36291 Query: 397 gcagcatcacatcatggggcgggctgt 423 ||| ||||| || |||||||| ||||| Sbjct: 36290 gcaacatcatattatggggcgagctgt 36264 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 260 cgtgaaattccaattgttcaccgtgtgattaaggt 294 ||||||||||||||||||||||||||||| ||||| Sbjct: 36677 cgtgaaattccaattgttcaccgtgtgatcaaggt 36643 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgct 51 ||||| ||||||||||||||| ||||||||||||| Sbjct: 39180 gagtcaatccgctcgatgcaggtccgccaggtgct 39146
>ref|NM_104138.2| Arabidopsis thaliana peptidase AT1G52600 mRNA, complete cds Length = 818 Score = 97.6 bits (49), Expect = 3e-17 Identities = 190/237 (80%) Strand = Plus / Plus Query: 61 catcagcctcggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgc 120 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 156 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 215 Query: 121 gactgggagtgagtccccggtggtcgtggttctttctggtagcatggagcctggattcaa 180 ||||| || || || |||||||| || ||||| ||||| |||||||| || || || || Sbjct: 216 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 275 Query: 181 aaggggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagt 240 ||||| ||||| |||| |||| |||||| ||||| || || || | || ||||| || Sbjct: 276 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 335 Query: 241 tgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttca 297 |||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 336 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttca 392
>gb|AY096703.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 574 Score = 97.6 bits (49), Expect = 3e-17 Identities = 190/237 (80%) Strand = Plus / Plus Query: 61 catcagcctcggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgc 120 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 69 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 128 Query: 121 gactgggagtgagtccccggtggtcgtggttctttctggtagcatggagcctggattcaa 180 ||||| || || || |||||||| || ||||| ||||| |||||||| || || || || Sbjct: 129 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 188 Query: 181 aaggggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagt 240 ||||| ||||| |||| |||| |||||| ||||| || || || | || ||||| || Sbjct: 189 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 248 Query: 241 tgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttca 297 |||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 249 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttca 305
>gb|AY064032.1| Arabidopsis thaliana putative signal peptidase subunit (At1g52600) mRNA, complete cds Length = 825 Score = 97.6 bits (49), Expect = 3e-17 Identities = 190/237 (80%) Strand = Plus / Plus Query: 61 catcagcctcggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgc 120 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 121 gactgggagtgagtccccggtggtcgtggttctttctggtagcatggagcctggattcaa 180 ||||| || || || |||||||| || ||||| ||||| |||||||| || || || || Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 181 aaggggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagt 240 ||||| ||||| |||| |||| |||||| ||||| || || || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334 Query: 241 tgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttca 297 |||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttca 391
>gb|AY084305.1| Arabidopsis thaliana clone 103157 mRNA, complete sequence Length = 691 Score = 97.6 bits (49), Expect = 3e-17 Identities = 190/237 (80%) Strand = Plus / Plus Query: 61 catcagcctcggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgc 120 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 121 gactgggagtgagtccccggtggtcgtggttctttctggtagcatggagcctggattcaa 180 ||||| || || || |||||||| || ||||| ||||| |||||||| || || || || Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 181 aaggggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagt 240 ||||| ||||| |||| |||| |||||| ||||| || || || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccgattcgagcaggtgaaattgt 334 Query: 241 tgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttca 297 |||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttca 391
>dbj|AK220581.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-87-D04 Length = 783 Score = 89.7 bits (45), Expect = 7e-15 Identities = 189/237 (79%) Strand = Plus / Plus Query: 61 catcagcctcggtatgattgttacgtcggcattgatcatatggaaggggttgatggttgc 120 |||||| || || |||||||| || || || |||||||||||||| | |||||| || Sbjct: 155 catcagtctagggatgattgtcacatctgctttgatcatatggaaagctttgatgtgtgt 214 Query: 121 gactgggagtgagtccccggtggtcgtggttctttctggtagcatggagcctggattcaa 180 ||||| || || || |||||||| || ||||| ||||| |||||||| || || || || Sbjct: 215 cactggaagcgaatctccggtggtggttgttctctctggaagcatggaacccggttttaa 274 Query: 181 aaggggtgatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagt 240 ||||| ||||| |||| |||| |||||| ||||| || | || | || ||||| || Sbjct: 275 gaggggggatatattgttcttgcacatgagtaaagacccggttcgagcaggtgaaattgt 334 Query: 241 tgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtgattaaggttca 297 |||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 335 tgttttcaatgttgatggtcgtgatattcccattgtccatcgtgtcattaaggttca 391
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 17 gagtcgatccgctcgatgcagctccgccaggtgct 51 ||||| ||||||||||||||| ||||||||||||| Sbjct: 249 gagtcaatccgctcgatgcaggtccgccaggtgct 215
>ref|NM_112441.3| Arabidopsis thaliana peptidase AT3G15710 mRNA, complete cds Length = 872 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 250 tgttgatggtcgtgaaattccaattgttca 279 ||||||||||||||||||||| |||||||| Sbjct: 381 tgttgatggtcgtgaaattcccattgttca 410 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 ctcggtatgattgttacgtcggcattgatcatatggaagg 107 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaagg 238
>ref|XM_512154.1| PREDICTED: Pan troglodytes similar to microsomal signal peptidase subunit (LOC455447), mRNA Length = 451 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 364 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 423 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 424 tcaaagttcatgaa 437
>gb|BT015660.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 543 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 250 tgttgatggtcgtgaaattccaattgttca 279 ||||||||||||||||||||| |||||||| Sbjct: 258 tgttgatggtcgtgaaattcccattgttca 287 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 ctcggtatgattgttacgtcggcattgatcatatggaagg 107 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 76 ctcggtatgatcgttacatctgcattgataatttggaagg 115
>gb|BT015149.1| Arabidopsis thaliana At3g15710 gene, complete cds Length = 805 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 250 tgttgatggtcgtgaaattccaattgttca 279 ||||||||||||||||||||| |||||||| Sbjct: 341 tgttgatggtcgtgaaattcccattgttca 370 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 ctcggtatgattgttacgtcggcattgatcatatggaagg 107 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 159 ctcggtatgatcgttacatctgcattgataatttggaagg 198
>ref|NM_033280.1| Homo sapiens SEC11-like 3 (S. cerevisiae) (SEC11L3), mRNA Length = 794 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 389 tcaaagttcatgaa 402
>emb|CR858452.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0613 (from clone DKFZp469M0613) Length = 864 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 319 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 378 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 379 tcaaagttcatgaa 392
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence Length = 160748 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 103571 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 103630 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 103631 tcaaagttcatgaa 103644
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 18407 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 18466 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 18467 tcaaagttcatgaa 18480
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 383 cagctgtggcttcagcagcatcacatcatggggcgggc 420 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 35595368 cagctttggcttcagcaacatcacatcatgggacgggc 35595331 Score = 48.1 bits (24), Expect = 0.023 Identities = 75/92 (81%) Strand = Plus / Minus Query: 86 tcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtccccggtggtc 145 ||||||||||| ||||||||||| ||||| | ||| ||||||||||| || | || Sbjct: 35596251 tcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagtt 35596192 Query: 146 gtggttctttctggtagcatggagcctggatt 177 |||||||| |||| |||||||||| |||||| Sbjct: 35596191 gtggttctatctgaaagcatggagcttggatt 35596160 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 188 gatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgttttt 247 |||||||||||||||| ||||||||| | || || || || ||||| ||||||||||| Sbjct: 35596010 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttc 35595951 Query: 248 aatg 251 |||| Sbjct: 35595950 aatg 35595947
>gb|AF212233.1|AF212233 Homo sapiens microsomal signal peptidase subunit mRNA, complete cds Length = 794 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 329 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 388 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 389 tcaaagttcatgaa 402
>emb|BX826032.1|CNS0A69G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 855 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 250 tgttgatggtcgtgaaattccaattgttca 279 ||||||||||||||||||||| |||||||| Sbjct: 364 tgttgatggtcgtgaaattcccattgttca 393 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 ctcggtatgattgttacgtcggcattgatcatatggaagg 107 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 182 ctcggtatgatcgttacatctgcattgataatttggaagg 221
>gb|AY086118.1| Arabidopsis thaliana clone 21563 mRNA, complete sequence Length = 820 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 250 tgttgatggtcgtgaaattccaattgttca 279 ||||||||||||||||||||| |||||||| Sbjct: 381 tgttgatggtcgtgaaattcccattgttca 410 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 68 ctcggtatgattgttacgtcggcattgatcatatggaagg 107 ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 199 ctcggtatgatcgttacatctgcattgataatttggaagg 238
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 383 cagctgtggcttcagcagcatcacatcatggggcgggc 420 ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 111760 cagctttggcttcagcaacatcacatcatgggacgggc 111723 Score = 48.1 bits (24), Expect = 0.023 Identities = 75/92 (81%) Strand = Plus / Minus Query: 86 tcggcattgatcatatggaaggggttgatggttgcgactgggagtgagtccccggtggtc 145 ||||||||||| ||||||||||| ||||| | ||| ||||||||||| || | || Sbjct: 112643 tcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagtt 112584 Query: 146 gtggttctttctggtagcatggagcctggatt 177 |||||||| |||| |||||||||| |||||| Sbjct: 112583 gtggttctatctgaaagcatggagcttggatt 112552 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 188 gatatcctgtttttgcgcatgagcaaagaacccatccgtactggagaaatagttgttttt 247 |||||||||||||||| ||||||||| | || || || || ||||| ||||||||||| Sbjct: 112402 gatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttc 112343 Query: 248 aatg 251 |||| Sbjct: 112342 aatg 112339
>gb|BC009703.1| Homo sapiens SEC11-like 3 (S. cerevisiae), mRNA (cDNA clone MGC:9299 IMAGE:3895819), complete cds Length = 782 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 316 ctggtgaaatagttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 375 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 376 tcaaagttcatgaa 389
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence Length = 93126 Score = 48.1 bits (24), Expect = 0.023 Identities = 87/108 (80%) Strand = Plus / Minus Query: 74 atgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgag 133 |||||||||||||| ||| |||| |||||||||| |||||| ||||| ||||| Sbjct: 793 atgattgttacgtctgcactgataatatggaaggcattgatgtgcatcactggcagtgaa 734 Query: 134 tccccggtggtcgtggttctttctggtagcatggagcctggattcaaa 181 || || || ||||| ||||||||||| || ||||| ||||| |||||| Sbjct: 733 tctcctgttgtcgttgttctttctggaagtatggaacctggcttcaaa 686
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete sequence Length = 113539 Score = 48.1 bits (24), Expect = 0.023 Identities = 87/108 (80%) Strand = Plus / Minus Query: 74 atgattgttacgtcggcattgatcatatggaaggggttgatggttgcgactgggagtgag 133 |||||||||||||| ||| |||| |||||||||| |||||| ||||| ||||| Sbjct: 34082 atgattgttacgtctgcactgataatatggaaggcattgatgtgcatcactggcagtgaa 34023 Query: 134 tccccggtggtcgtggttctttctggtagcatggagcctggattcaaa 181 || || || ||||| ||||||||||| || ||||| ||||| |||||| Sbjct: 34022 tctcctgttgtcgttgttctttctggaagtatggaacctggcttcaaa 33975
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 tcgatccgctcgatgcagctccgcca 45 |||||||||||||||||||| ||||| Sbjct: 1991512 tcgatccgctcgatgcagctgcgcca 1991487
>ref|NM_025468.1| Mus musculus Sec11-like 3 (S. cerevisiae) (Sec11l3), mRNA Length = 771 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 320 ctggtgaaatagttgtttttaaggttgaaggaagagacattccgatagttcacagagtaa 379 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 380 tcaaggttcatgaa 393
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 170196 ctggtgaaatagttgtttttaaggttgaaggaagagacattccgatagttcacagagtaa 170255 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 170256 tcaaggttcatgaa 170269
>ref|NM_153628.1| Rattus norvegicus Sec11-like 3 (S. cerevisiae) (Sec11l3), mRNA Length = 679 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 328 ctggtgaaatagttgtttttaaagttgaaggaagagacattccgatagttcacagagtaa 387 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 388 tcaaggttcatgaa 401
>dbj|AK034936.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430064A07 product:SIGNAL PEPTIDASE 18 SUBUNIT (FRAGMENT) homolog [Bos taurus], full insert sequence Length = 2769 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 295 ctggtgaaatagttgtttttaaggttgaaggaagagacattccgatagttcacagagtaa 354 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 355 tcaaggttcatgaa 368
>dbj|AK007641.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810029G24 product:MICROSOMAL SIGNAL PEPTIDASE 21 KDA SUBUNIT (EC 3.4.-.-) (SPASE 21 KDA SUBUNIT) (SPC21) homolog [Rattus norvegicus], full insert sequence Length = 771 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 320 ctggtgaaatagttgtttttaaggttgaaggaagagacattccgatagttcacagagtaa 379 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 380 tcaaggttcatgaa 393
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ccccggtggtcgtggttctttc 156 |||||||||||||||||||||| Sbjct: 27536437 ccccggtggtcgtggttctttc 27536458
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 ccccggtggtcgtggttctttc 156 |||||||||||||||||||||| Sbjct: 100408 ccccggtggtcgtggttctttc 100429
>gb|AY610341.1| Sus scrofa clone rebs19c_j12.y1.abd, mRNA sequence Length = 663 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||| ||||||||||| ||||| || || || |||||||| |||||| | || | Sbjct: 312 ctggtgaaattgttgtttttaaagttgaaggacgagacattccaatagttcacagagtaa 371 Query: 288 ttaaggttcatgaa 301 | || ||||||||| Sbjct: 372 tcaaagttcatgaa 385
>gb|BC037187.1| Mus musculus Sec11-like 3 (S. cerevisiae), mRNA (cDNA clone MGC:47104 IMAGE:3666130), complete cds Length = 829 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 362 ctggtgaaatagttgtttttaaggttgaaggaagagacattccgatagttcacagagtaa 421 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 422 tcaaggttcatgaa 435
>dbj|AB022714.2| Rattus norvegicus mRNA for signal peptidase 21kDa subunit, complete cds Length = 679 Score = 44.1 bits (22), Expect = 0.37 Identities = 61/74 (82%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttgatggtcgtgaaattccaattgttcaccgtgtga 287 |||| ||||||||||||||||| ||||| || | || ||||| || |||||| | || | Sbjct: 328 ctggtgaaatagttgtttttaaagttgaaggaagagacattccgatagttcacagagtaa 387 Query: 288 ttaaggttcatgaa 301 | |||||||||||| Sbjct: 388 tcaaggttcatgaa 401
>gb|AC146398.4| Pan troglodytes BAC clone RP43-54K1 from 7, complete sequence Length = 185645 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 agcatggagcctggattcaaa 181 ||||||||||||||||||||| Sbjct: 164666 agcatggagcctggattcaaa 164686
>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete sequence Length = 149561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 agctgtggcttcagcagcatc 404 ||||||||||||||||||||| Sbjct: 65008 agctgtggcttcagcagcatc 64988
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaatagttgtttttaatgtt 253 |||||||||||||||||||| Sbjct: 570318 aaatagttgtttttaatgtt 570299
>gb|DQ214694.1| Taeniopygia guttata clone 0058P0007H08 21 kDa signal peptidase subunit variant 1-like mRNA, complete sequence Length = 715 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 268 ctggtgaaatagttgtttttaaagttga 295
>gb|AC150635.4| Bos taurus BAC CH240-448P19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 151766 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ggaaagtgctgaagttgacatcct 330 ||||| |||||||||||||||||| Sbjct: 101298 ggaaaatgctgaagttgacatcct 101321
>ref|XM_424458.1| PREDICTED: Gallus gallus similar to Microsomal signal peptidase 21 kDa subunit (SPase 21 kDa subunit) (SPC21) (LOC426850), mRNA Length = 772 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 304 ctggtgaaatagttgtttttaaggttga 331
>gb|DQ366724.1| Uncultured Prochlorococcus marinus clone HF10-11H7 genomic sequence Length = 34000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaatagttgtttttaatgtt 253 |||||||||||||||||||| Sbjct: 25694 aaatagttgtttttaatgtt 25713
>emb|AL365364.19| Human DNA sequence from clone RP11-624L12 on chromosome 10 Contains a ribosomal protein L17 (RPL17) pseudogene and the 3'end of the FER1L3 gene for fer-1-like 3, myoferlin (C. elegans), complete sequence Length = 173864 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 atagttgtttttaatgttgatggt 259 |||||||||| ||||||||||||| Sbjct: 105708 atagttgtttctaatgttgatggt 105731
>emb|AL354831.18| Human DNA sequence from clone RP11-188A23 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 144586 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggagaaatagttgtttttaa 249 |||||||||||||||||||| Sbjct: 95691 ggagaaatagttgtttttaa 95672
>emb|X77688.1|SCPRP21 S.cerevisiae PRP21, SPP91, CDC6, NUC1, CRY2 and S24 genes Length = 36017 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaaggggtgatatcctgttt 199 |||||||||||||||||||| Sbjct: 33892 aaaggggtgatatcctgttt 33911
>emb|CR353329.2| Gallus gallus finished cDNA, clone ChEST280c17 Length = 771 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 304 ctggtgaaatagttgtttttaaggttga 331
>emb|BX935949.2| Gallus gallus finished cDNA, clone ChEST437a5 Length = 939 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 471 ctggtgaaatagttgtttttaaggttga 498
>emb|BX950629.1| Gallus gallus finished cDNA, clone ChEST370o18 Length = 780 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 311 ctggtgaaatagttgtttttaaggttga 338
>emb|BX935228.1| Gallus gallus finished cDNA, clone ChEST956e2 Length = 743 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 277 ctggtgaaatagttgtttttaaggttga 304
>emb|BX932058.1| Gallus gallus finished cDNA, clone ChEST409m2 Length = 765 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctggagaaatagttgtttttaatgttga 255 |||| ||||||||||||||||| ||||| Sbjct: 298 ctggtgaaatagttgtttttaaggttga 325
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gccaggtgctctcccagatc 61 |||||||||||||||||||| Sbjct: 2770457 gccaggtgctctcccagatc 2770438
>gb|AE004915.1| Pseudomonas aeruginosa PAO1, section 476 of 529 of the complete genome Length = 9980 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatcggcgaccaggtggagt 20 |||||||||||||||||||| Sbjct: 1733 gatcggcgaccaggtggagt 1752
>gb|AE005149.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 10 of 32 of the complete genome Length = 10686 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tggagtcgatccgctcgatg 34 |||||||||||||||||||| Sbjct: 7133 tggagtcgatccgctcgatg 7114
>emb|Z49466.1|SCYJL191W S.cerevisiae chromosome X reading frame ORF YJL191w Length = 1495 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaaggggtgatatcctgttt 199 |||||||||||||||||||| Sbjct: 390 aaaggggtgatatcctgttt 409
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cagctgtggcttcagcagca 402 |||||||||||||||||||| Sbjct: 94821 cagctgtggcttcagcagca 94840
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cagctgtggcttcagcagca 402 |||||||||||||||||||| Sbjct: 217035 cagctgtggcttcagcagca 217054
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tggagtcgatccgctcgatg 34 |||||||||||||||||||| Sbjct: 109219 tggagtcgatccgctcgatg 109200
>gb|L12564.1|YSCRPCRYII Saccharomyces cerevisiae ribosomal protein 59 (CRY2) gene, complete cds Length = 1586 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aaaggggtgatatcctgttt 199 |||||||||||||||||||| Sbjct: 602 aaaggggtgatatcctgttt 621 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,317,182 Number of Sequences: 3902068 Number of extensions: 3317182 Number of successful extensions: 59470 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59225 Number of HSP's gapped (non-prelim): 236 length of query: 426 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 404 effective length of database: 17,147,199,772 effective search space: 6927468707888 effective search space used: 6927468707888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)