ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kina... 30 2.3
2E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET... 29 6.7
3E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ET... 29 6.7
4MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 6.7
5MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 6.7
6FES_MOUSE (P16879) Proto-oncogene tyrosine-protein kinase Fes/Fp... 28 8.7
7GRP78_PICAN (Q9HG01) 78 kDa glucose-regulated protein homolog pr... 28 8.7

>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 homolog
          Length = 692

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 210 RLPFDVLRSPPTSVGSSPFDLPRHRI 133
           ++P    RSPPTS  +SP+  P+H++
Sbjct: 262 QIPQSAFRSPPTSQCTSPYSSPQHQV 287



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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 282 HPQLHPRAAPHRRGTVAGAAARPIVS 359
           HP  HP A  H   T+A AAA    S
Sbjct: 679 HPHSHPHAGQHTHSTIAAAAAAAAAS 704



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>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 282 HPQLHPRAAPHRRGTVAGAAARPIVS 359
           HP  HP A  H   T+A AAA    S
Sbjct: 625 HPHSHPHAGQHTHSTIAAAAAAAAAS 650



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>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 150 LPRHRICGGLPLPPRARQRVRLV 82
           LP +    GLPLPPR R+R+ +V
Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162



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>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 150 LPRHRICGGLPLPPRARQRVRLV 82
           LP +    GLPLPPR R+R+ +V
Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162



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>FES_MOUSE (P16879) Proto-oncogene tyrosine-protein kinase Fes/Fps (EC|
           2.7.10.2) (C-Fes)
          Length = 820

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 369 HNQTRRWAERRHRLPCP 319
           + QTR + E+ HRLPCP
Sbjct: 764 NQQTREFVEKGHRLPCP 780



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>GRP78_PICAN (Q9HG01) 78 kDa glucose-regulated protein homolog precursor (GRP|
           78) (Immunoglobulin heavy chain-binding protein homolog)
           (BiP)
          Length = 665

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +1

Query: 190 EDVEGKAEVDARAEQFIRQFRE-ELKLERINSILNYTHALRRTA 318
           E++E K E    AE+F +Q +E   K+E  N++ NY H+L+  A
Sbjct: 546 EEIEKKIE---EAEKFAQQDKELREKVESRNALENYAHSLKNQA 586


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,320,807
Number of Sequences: 219361
Number of extensions: 829219
Number of successful extensions: 3385
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3385
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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