ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20c19 |
|---|---|
| Clone Library Name | barley_pub |
>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 228 Score = 143 bits (361), Expect = 2e-34 Identities = 80/150 (53%), Positives = 87/150 (58%), Gaps = 2/150 (1%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 NV++EAGLKKLD YLL+RSYISGYQAS DDLAVYS FS AP S+ TNVARW+ HIDALL+ Sbjct: 6 NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 65 Query: 246 LSGVTAPGQGVKVLSSIVPETST--TXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXX 419 LSGVTA GQGVKV S+ VP ST LF Sbjct: 66 LSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERA 125 Query: 420 XXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 126 AAVKASGKKKESGKSSVLLDVKPWDDETDM 155
>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 225 Score = 122 bits (307), Expect = 4e-28 Identities = 68/148 (45%), Positives = 79/148 (53%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 NVN+EAGL+KLD YLL+RSYISGYQASKDD+ V++ AP ++ NV RWY+HI ALL+ Sbjct: 6 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLR 65 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 425 SGVTA G+GVKV S S T LF Sbjct: 66 SSGVTAEGEGVKV-ESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAA 124 Query: 426 XXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 125 VKASGKKKESGKSSVLLDVKPWDDETDM 152
>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 225 Score = 119 bits (298), Expect = 5e-27 Identities = 66/149 (44%), Positives = 81/149 (54%) Frame = +3 Query: 63 FNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALL 242 +++++EAGL+KLD YLLSRSYISGYQASKDDLAV++ + P S NV+RWYNH++ALL Sbjct: 5 YDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALL 64 Query: 243 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 422 ++SGV+A G GV V S V T LF Sbjct: 65 RISGVSAEGCGVTVEGSSV-ATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAA 123 Query: 423 XXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 124 AVKASGKKKESGKSSVLLDVKPWDDETDM 152
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 115 bits (288), Expect = 7e-26 Identities = 66/158 (41%), Positives = 82/158 (51%), Gaps = 5/158 (3%) Frame = +3 Query: 51 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 MAA N+N++AGLKKLD +LL+RSYI+GYQASKDD+ V++ + P S N +RWYNHI Sbjct: 1 MAAFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHI 60 Query: 231 DALLKLSGVTAPGQGVKVLSS--IVPE---TSTTXXXXXXXXXXXXXXXXXLFXXXXXXX 395 DALL++SGV+A G GV V S I E T LF Sbjct: 61 DALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEE 120 Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VL+D+KPWDDETDM Sbjct: 121 KKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDM 158
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 114 bits (284), Expect = 2e-25 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 5/158 (3%) Frame = +3 Query: 51 MAATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 MAA N+N+ +GLKKLD +LL+RSYI+GYQASKDD+ V++ S P S NV+RW+NHI Sbjct: 1 MAAFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHI 60 Query: 231 DALLKLSGVTAPGQGVKVL-SSIVPE----TSTTXXXXXXXXXXXXXXXXXLFXXXXXXX 395 DALL++SGV+A G GV V SS + E T LF Sbjct: 61 DALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEE 120 Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VL+D+KPWDDETDM Sbjct: 121 KKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDM 158
>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 230 Score = 102 bits (253), Expect = 8e-22 Identities = 63/157 (40%), Positives = 76/157 (48%), Gaps = 5/157 (3%) Frame = +3 Query: 54 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 A TF+ +++ AGL LD YLLSRSYI+GYQASKDDL V+S A ++ NV+RWY HI Sbjct: 1 AVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHI 60 Query: 231 DALLKLSGVTAPGQGVKVLSSIVPE---TSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXX 401 DALL++SGV+ G GV V + T LF Sbjct: 61 DALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKK 120 Query: 402 XXXXXXXXXXXX-XXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 121 AAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDM 157
>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)| Length = 221 Score = 69.3 bits (168), Expect = 6e-12 Identities = 44/148 (29%), Positives = 55/148 (37%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 +V GLK+L+ +L SYISGY SK DL+V+ AP + NVARWY HI + Sbjct: 4 DVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVNVARWYRHIASFEA 63 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXX 425 G + L+ P + Sbjct: 64 AERAAWSGTPLPQLAGGKPTVAAAAKPAADDDDDVDLFGSDDEEDEEAERIKQERVAAYA 123 Query: 426 XXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 124 AKKSKKPALIAKSSVLLDVKPWDDETDM 151
>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation| factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta' 2) (EF-1-beta' 2) Length = 224 Score = 66.6 bits (161), Expect = 4e-11 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 1/154 (0%) Frame = +3 Query: 51 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 227 MA TF+ ++ E G+K ++ +L ++YISG Q S DD+ VY+ V P N ++WY Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60 Query: 228 IDALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX 407 + + L S PG+ V V + LF Sbjct: 61 VASQLAKS---FPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAA 117 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VL+DVKPWDDETDM Sbjct: 118 EEREAAKKDTKKPKESGKSSVLMDVKPWDDETDM 151
>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)| Length = 226 Score = 65.1 bits (157), Expect = 1e-10 Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 7/155 (4%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGLK L +L +SYI GY S+ D+AV+ S APP+ + RWYNHI + K Sbjct: 4 DLKSPAGLKVLKEFLADKSYIEGYVPSQADVAVFDALSAAPPADLFHALRWYNHIKSYEK 63 Query: 246 LSGVTAPGQGVKVLSSIVP-ETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX----- 407 + PG K L + P T LF Sbjct: 64 QKS-SLPGV-KKALGNYGPVNIEDTTGSAAKETKEEDDDDIDLFGSDDEEESEDAKRVRD 121 Query: 408 -XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 122 ERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETDM 156
>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)| Length = 227 Score = 64.7 bits (156), Expect = 1e-10 Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 6/154 (3%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGLK L+ +L +SYI GY S+ D+AV+ S APP+ + RWYNHI + K Sbjct: 4 DLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPADLFHALRWYNHIKSYEK 63 Query: 246 ----LSGVTAP--GQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX 407 L GV P G + T+ Sbjct: 64 QKSSLPGVKKPLGNYGPVNIEDTTGSTAKDTKEEDDDDDIDLFGSDDEEENEESKRVREE 123 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 124 RLAQYEAKKSKKPALIAKSSILLDVKPWDDETDM 157
>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation| factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) Length = 228 Score = 64.7 bits (156), Expect = 1e-10 Identities = 46/156 (29%), Positives = 63/156 (40%), Gaps = 3/156 (1%) Frame = +3 Query: 51 MAATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNH 227 MA TF+ ++ E GLK L+ +L ++YISG Q S DD+ VY+ P N ++WY+ Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60 Query: 228 IDALLKLSGVTAPGQGVKVLSSIVP--ETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXX 401 + + L S GV+V + P E LF Sbjct: 61 VASHLAKS-FPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKK 119 Query: 402 XXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLL+VKPWDDETDM Sbjct: 120 AAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDM 155
>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 63.9 bits (154), Expect = 2e-10 Identities = 44/155 (28%), Positives = 58/155 (37%), Gaps = 6/155 (3%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX------ 407 A G+K LF Sbjct: 64 ---EKASLPGIKKALGTYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMV 512 +LLDVKPWDDETDMV Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDMV 155
>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 63.2 bits (152), Expect = 4e-10 Identities = 45/152 (29%), Positives = 59/152 (38%), Gaps = 4/152 (2%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 246 ----LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXX 413 L GV G SS+ T + Sbjct: 64 EKASLPGV-KKSLGKYGPSSVEDTTGSGAADAKDDDDIDLFGSDDEEESEEAKKLREERL 122 Query: 414 XXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 123 AQYESKKAKKPAVVAKSSILLDVKPWDDETDM 154
>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 223 Score = 63.2 bits (152), Expect = 4e-10 Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 7/159 (4%) Frame = +3 Query: 54 AATF-NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 A TF +++ GLK L+ +L ++Y+SG SKDD+ V++ P + N ARWY+ + Sbjct: 1 AVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTV 60 Query: 231 DALL------KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXX 392 A L K GV PG G +S LF Sbjct: 61 AAALASRFPGKAVGVNLPGGGA--------ASSAAAAAPAAKDADEDDDDLDLF-GDETE 111 Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VLLDVKPWDDETDM Sbjct: 112 EDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDM 150
>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 62.4 bits (150), Expect = 7e-10 Identities = 44/154 (28%), Positives = 57/154 (37%), Gaps = 6/154 (3%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEK 63 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX------ 407 A GVK LF Sbjct: 64 ---EKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDM 154
>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 62.4 bits (150), Expect = 7e-10 Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 6/154 (3%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ + RWYNHI + K Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPADLCHALRWYNHIKSYEK 63 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX------ 407 A GVK + LF Sbjct: 64 ---EKASLPGVKKALGKYGPANVEDTTESGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDM 154
>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 60.5 bits (145), Expect = 3e-09 Identities = 42/154 (27%), Positives = 56/154 (36%), Gaps = 6/154 (3%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK 245 ++ + AGL+ L+ +L +SYI GY S+ D+AV+ PP+ + RWYNHI + K Sbjct: 4 DLKSAAGLRVLNDFLADKSYIEGYVPSQADIAVFEAVGAPPPADLFHALRWYNHIKSYEK 63 Query: 246 LSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXX------ 407 A GVK LF Sbjct: 64 ---EKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREE 120 Query: 408 XXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 121 RLAQYESKKAKKPALVAKSSILLDVKPWDDETDM 154
>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 215 Score = 59.3 bits (142), Expect = 6e-09 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 1/153 (0%) Frame = +3 Query: 54 AATFN-VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 A TF+ ++ GLK L+ +L ++YISG +KDD+ V++ + P + N ARWY+ + Sbjct: 1 AVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTV 60 Query: 231 DALLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXX 410 A + PGQ V +S P + + Sbjct: 61 AAAV---SSRFPGQASGVSASSAPAAAAP------AASKDEDDDDDMDLFGDETEEDKKA 111 Query: 411 XXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 VL+D+KPWDDETDM Sbjct: 112 AAEREAAKPAKKKESGKSSVLMDIKPWDDETDM 144
>EF1B2_BOMMO (P29522) Elongation factor 1-beta'| Length = 221 Score = 57.8 bits (138), Expect = 2e-08 Identities = 38/151 (25%), Positives = 52/151 (34%) Frame = +3 Query: 57 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDA 236 A +V GL L+ YL +SY+SGY S+ D+ V+ + AP + +V RWYN I + Sbjct: 1 AVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIAS 60 Query: 237 LLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXX 416 T + + P Sbjct: 61 YTSAERKTWSQGTSPLTAGAKPTAPAPAAKDDDDDDVDLFGSGDEEEDAEAERIREERLK 120 Query: 417 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 121 AYADKKSKKPALIAKSSILLDVKPWDDETDM 151
>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)| Length = 206 Score = 55.8 bits (133), Expect = 7e-08 Identities = 35/151 (23%), Positives = 59/151 (39%) Frame = +3 Query: 57 ATFNVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDA 236 A ++ AE G ++L+ L ++SY+ GY+ S++D+A +++ + AP + RWY HI + Sbjct: 1 ANIDLKAEKGQEQLNELLANKSYLQGYEPSQEDVAAFNQLNKAPSDKFPYLLRWYKHISS 60 Query: 237 LLKLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXX 416 PG +P +++ Sbjct: 61 FSDAEKKGFPG---------IPTSASKEEDDDVDLFGSDE------EDEEAEKIKAERMK 105 Query: 417 XXXXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 V+LD+KPWDDETDM Sbjct: 106 AYSDKKSKKPAIVAKSSVILDIKPWDDETDM 136
>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)| Length = 214 Score = 53.5 bits (127), Expect = 3e-07 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 1/149 (0%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPST-CTNVARWYNHIDALL 242 ++ ++AGLK+L+ +LL +S+I GY+ S+ D V+ VAP + N ARWY I A Sbjct: 5 DLTSDAGLKQLNDFLLDKSFIEGYEPSQADAVVFKAVGVAPDTAKYPNGARWYKQI-ATY 63 Query: 243 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 422 L+ T PG K +S+ PE + Sbjct: 64 DLA--TLPGT-AKEVSAYGPEGAAAAEEDEIDLFGSDEE-----EDPEAERIKAERVAEY 115 Query: 423 XXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 V LDVKPWDDET M Sbjct: 116 NKKKAAKPKAVHKSLVTLDVKPWDDETPM 144
>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 52.4 bits (124), Expect = 7e-07 Identities = 23/55 (41%), Positives = 33/55 (60%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHI 230 ++ + AGL+ L+ YL +SYI GY S+ D+AV+ S PP+ WYNHI Sbjct: 4 DLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSXPPPAXLXXXXXWYNHI 58
>SYC_MOUSE (Q9ER72) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 831 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Frame = +3 Query: 81 AGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHIDALL 242 A ++ LD +L +RSYI GY S+ D+ V+ + S P S +VARW+ HI+ALL Sbjct: 23 ARVQALDQHLSTRSYIQGYSLSQADVDVFRQLSAPPADSRLFHVARWFRHIEALL 77
>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1| (EF-1-beta/delta 1) Length = 213 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 1/149 (0%) Frame = +3 Query: 66 NVNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAP-PSTCTNVARWYNHIDALL 242 +V + AGL + L +++ +G+ S +D +++ AP ST NVARWY ++ + Sbjct: 4 DVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYT 63 Query: 243 KLSGVTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXX 422 T G ++ + + Sbjct: 64 DAERKTWASAGGSAPAAAAADGDDFDLFGSDDEEEDAEKAKIV----------EERLAAY 113 Query: 423 XXXXXXXXXXXXXXXVLLDVKPWDDETDM 509 V+LDVKPWDDETD+ Sbjct: 114 AEKKAKKAGPIAKSSVILDVKPWDDETDL 142
>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)| Length = 213 Score = 39.3 bits (90), Expect = 0.006 Identities = 34/145 (23%), Positives = 47/145 (32%), Gaps = 4/145 (2%) Frame = +3 Query: 87 LKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLK----LSG 254 +K L+ +L +SYI G A++ D+ VY F P RW+NHI + + L Sbjct: 12 IKSLNEFLADKSYIDGTTATQADVTVYKAFQKEFPQ----FTRWFNHIASFTEEFEDLPA 67 Query: 255 VTAPGQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXXXXX 434 AP ++ E Sbjct: 68 GKAPAASGSAAAAAEEEDDEDVDLFGSDDEVDEEAEKL---------KQQRLAEYAAKKA 118 Query: 435 XXXXXXXXXXXVLLDVKPWDDETDM 509 V LDVKPWDDETD+ Sbjct: 119 AKGPKPAAKSIVTLDVKPWDDETDL 143
>EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) (Translation| elongation factor 1B alpha) (Eukaryotic elongation factor 1Balpha) (eEF1Balpha) Length = 205 Score = 36.6 bits (83), Expect = 0.041 Identities = 33/148 (22%), Positives = 46/148 (31%), Gaps = 7/148 (4%) Frame = +3 Query: 87 LKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDALLKLSGVTAP 266 LK+L+ L +SYI G S+ D+ V+ F A P +RW+NH Sbjct: 11 LKQLNASLADKSYIEGTAVSQADVTVFKAFQSAYPE----FSRWFNH------------- 53 Query: 267 GQGVKVLSSIVPETSTTXXXXXXXXXXXXXXXXXLFXXXXXXXXXXXXXXXXXXXXXXXX 446 ++S E + LF Sbjct: 54 ------IASKADEFDSFPAASAAAAEEEEDDDVDLFGSDDEEADAEAEKLKAERIAAYNA 107 Query: 447 XXXXX-------XXVLLDVKPWDDETDM 509 V LDVKPWDDET++ Sbjct: 108 KKAAKPAKPAAKSIVTLDVKPWDDETNL 135
>EF1D_XENLA (P29693) Elongation factor 1-delta (EF-1-delta) (P36)| Length = 265 Score = 34.3 bits (77), Expect = 0.20 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 182 ILLDVKPWDDETDM 195
>EF1D_RABIT (P53787) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 34.3 bits (77), Expect = 0.20 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 197 ILLDVKPWDDETDM 210
>EF1D_MOUSE (P57776) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 34.3 bits (77), Expect = 0.20 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 197 ILLDVKPWDDETDM 210
>EF1D_HUMAN (P29692) Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4)| Length = 280 Score = 34.3 bits (77), Expect = 0.20 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 +LLDVKPWDDETDM Sbjct: 197 ILLDVKPWDDETDM 210
>EF1D_ARTSA (P32192) Elongation factor 1-delta (EF-1-delta)| Length = 237 Score = 33.9 bits (76), Expect = 0.27 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 +LLD+KPWDDETDM Sbjct: 154 ILLDIKPWDDETDM 167
>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2| (EF-1-beta/delta 2) Length = 262 Score = 32.7 bits (73), Expect = 0.60 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 V+LDVKPWDDETD+ Sbjct: 178 VILDVKPWDDETDL 191
>EF1D_DROME (Q9VL18) Probable elongation factor 1-delta (EF-1-delta)| Length = 256 Score = 32.3 bits (72), Expect = 0.78 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +3 Query: 468 VLLDVKPWDDETDM 509 ++LDVKPWDDETD+ Sbjct: 173 IILDVKPWDDETDL 186
>ZN33A_HUMAN (Q06730) Zinc finger protein 33A (Zinc finger protein KOX31) (Zinc| finger and ZAK-associated protein with KRAB domain) (ZZaPK) Length = 810 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -1 Query: 300 GQLMTEPSHLDQGQ*LHSASGAHQCDCTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRCS 121 G+ E SHL + Q +H+ QC+ W KS + Q SH + + Sbjct: 334 GKAFWEKSHLTRHQRVHTGQKPFQCNECEKAFWDKS-----NLTKHQRSHTGEKPFECNE 388 Query: 120 CGTEGSHQAF*GLPQR*H 67 CG SH++ L QR H Sbjct: 389 CGKAFSHKSALTLHQRTH 406
>ZN11B_HUMAN (Q06732) Zinc finger protein 11B| Length = 778 Score = 31.2 bits (69), Expect = 1.7 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -1 Query: 300 GQLMTEPSHLDQGQ*LHSASGAHQCDCTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRCS 121 G+ E SHL + Q +H+ QC+ W KS + Q SH + + Sbjct: 335 GKAFWEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKS-----NLTKHQRSHTGEKPFECNE 389 Query: 120 CGTEGSHQAF*GLPQR*H 67 CG SH++ L QR H Sbjct: 390 CGKAFSHKSALTLHQRTH 407
>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 9) (ADAM-TS 9) (ADAM-TS9) Length = 1935 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 176 LSCSTIDLHQCCKVVQSH*CAPEAEWSYCPWSRCEGS 286 LSC +D + +H C +A WS PWS C S Sbjct: 1420 LSCEILDKPPDREQCNTHACPHDAAWSTGPWSSCSVS 1456
>GSTT3_DROME (Q9VG97) Glutathione S-transferase D3 (EC 2.5.1.18) (DmGST22)| Length = 199 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%) Frame = +3 Query: 96 LDGYLLSRSYISGYQASKDDLAVY---SEFSVA--PPSTCTNVARWYNHI 230 L+ +L + Y++G Q + D+A+ S F V S NVARWY+H+ Sbjct: 121 LNTFLEGQDYVAGDQYTVADIAILANVSNFDVVGFDISKYPNVARWYDHV 170
>ZN324_HUMAN (O75467) Zinc finger protein 324 (Zinc finger protein ZF5128)| Length = 553 Score = 29.6 bits (65), Expect = 5.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = -1 Query: 300 GQLMTEPSHLDQGQ*LHSASGAHQCD-CTTLQHWCKSMVEQLRIQNTQPSHPWKLGIQRC 124 G+ ++ SHL Q Q +HS + C C S+V RI + S RC Sbjct: 291 GKAFSQTSHLTQHQRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSF-------RC 343 Query: 123 S-CGTEGSH 100 S CG SH Sbjct: 344 SECGKAFSH 352
>HGF_RAT (P17945) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 239 PEAEWSYCPWSRCEGSVINCP*NLNY 316 P W YCP SRCEG NL++ Sbjct: 458 PLVPWDYCPISRCEGDTTPTIVNLDH 483
>HGF_MOUSE (Q08048) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 239 PEAEWSYCPWSRCEGSVINCP*NLNY 316 P W YCP SRCEG NL++ Sbjct: 458 PLIPWDYCPISRCEGDTTPTIVNLDH 483
>HGF_HUMAN (P14210) Hepatocyte growth factor precursor (Scatter factor) (SF)| (Hepatopoeitin A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain] Length = 728 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 239 PEAEWSYCPWSRCEGSVINCP*NLNY 316 P W YCP SRCEG NL++ Sbjct: 457 PLIPWDYCPISRCEGDTTPTIVNLDH 482
>MYPC3_CHICK (Q90688) Myosin-binding protein C, cardiac-type (Cardiac MyBP-C)| (C-protein, cardiac muscle isoform) Length = 1271 Score = 28.9 bits (63), Expect = 8.6 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +3 Query: 69 VNAEAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHID 233 +N A LKK D +L + + G S+ D+ V+ APPS +A Y D Sbjct: 288 LNFSALLKKRDSFLRTANRGDGKSDSQPDVDVWEILRKAPPSEYEKIAFQYGITD 342
>LIPB2_MOUSE (O35711) Liprin-beta-2 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein binding protein 2) (PTPRF-interacting protein binding protein 2) (Coiled-coil-like protein 1) Length = 882 Score = 28.9 bits (63), Expect = 8.6 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +3 Query: 78 EAGLKKLDGYLLSRSYISGYQASKDDLAVYSEFSVAPPSTCTNVARWYNHIDAL-LKLSG 254 EA L+++DG I+G + + D E ++PPSTC N + I+ L L L Sbjct: 10 EAALEQMDGI------IAGTKTAADFSDGTCEPGLSPPSTCLNSMPVLHLIEDLRLALEM 63 Query: 255 VTAPGQGVKVLSSIVPETST 314 + P + +LS + T+T Sbjct: 64 LALPQEREALLSQVPGPTAT 83
>ATS18_MOUSE (Q4VC17) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 18) (ADAM-TS 18) (ADAM-TS18) Length = 1219 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 8/35 (22%) Frame = +2 Query: 197 LHQCC--------KVVQSH*CAPEAEWSYCPWSRC 277 LH C +V SH C PE WS PWS+C Sbjct: 971 LHSLCPVSTPTQVQVCNSHACPPE--WSPSPWSQC 1003 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,930,486 Number of Sequences: 219361 Number of extensions: 1078487 Number of successful extensions: 3251 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3238 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
