Clone Information

BLAST Search Result

Clone Name	bags20c13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TBC15_HUMAN (Q8TC07) TBC1 domain family member 15	89	1e-17
2	TBC15_MOUSE (Q9CXF4) TBC1 domain family member 15	89	1e-17
3	TBC17_MOUSE (Q8BYH7) TBC1 domain family member 17	85	1e-16
4	TBC17_HUMAN (Q9HA65) TBC1 domain family member 17	83	4e-16
5	GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)	71	2e-12
6	GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)	68	2e-11
7	TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16	65	2e-10
8	GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)	64	4e-10
9	US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to th...	56	7e-08
10	US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein	56	7e-08
11	GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)	56	7e-08
12	GYP2_YEAST (P53258) GTPase-activating protein GYP2 (MAC1-depende...	53	6e-07
13	GYP1_YEAST (Q08484) GTPase-activating protein GYP1 (GAP for YPT1)	49	9e-06
14	TBCD2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antig...	46	8e-05
15	UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC ...	45	1e-04
16	TBC12_HUMAN (O60347) TBC1 domain family member 12	44	4e-04
17	YAD4_SCHPO (Q09830) Hypothetical protein C4G8.04 in chromosome I	43	5e-04
18	TBC13_MOUSE (Q8R3D1) TBC1 domain family member 13	43	7e-04
19	TBC14_HUMAN (Q9P2M4) TBC1 domain family member 14	42	9e-04
20	TBC14_MOUSE (Q8CGA2) TBC1 domain family member 14	42	9e-04
21	TB22B_MACFA (Q95LL3) TBC1 domain family member 22B	42	0.001
22	TB22B_HUMAN (Q9NU19) TBC1 domain family member 22B	42	0.001
23	TBCD1_BOVIN (O97790) TBC1 domain family member 1 (Lyncein) (Frag...	40	0.003
24	TBCD1_HUMAN (Q86TI0) TBC1 domain family member 1	40	0.006
25	TBCD1_MOUSE (Q60949) TBC1 domain family member 1	40	0.006
26	TBCD8_HUMAN (O95759) TBC1 domain family member 8 (Vascular Rab-G...	39	0.007
27	TB22A_HUMAN (Q8WUA7) TBC1 domain family member 22A	39	0.009
28	TBCD4_MOUSE (Q8BYJ6) TBC1 domain family member 4 (Akt substrate ...	39	0.012
29	TB22A_MOUSE (Q8R5A6) TBC1 domain family member 22A	39	0.012
30	TBCD8_MOUSE (Q9Z1A9) TBC1 domain family member 8 (Vascular Rab-G...	39	0.012
31	TB22A_MACFA (Q95KI1) TBC1 domain family member 22A (Fragment)	39	0.012
32	TBCD3_HUMAN (Q8IZP1) TBC1 domain family member 3 (Rab GTPase-act...	39	0.012
33	TBCD4_HUMAN (O60343) TBC1 domain family member 4 (Akt substrate ...	38	0.021
34	TBCD5_HUMAN (Q92609) TBC1 domain family member 5	37	0.047
35	TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5	36	0.061
36	CJ006_HUMAN (Q8IX21) Protein C10orf6	36	0.061
37	CJ006_PONPY (Q5REF4) Protein C10orf6 homolog	34	0.30
38	YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II	33	0.52
39	MSB4_YEAST (Q12317) GTPase-activating protein MSB4 (Multicopy su...	33	0.67
40	GYP3_YEAST (P48566) GTPase-activating protein GYP3 (Protein MSB3...	32	0.88
41	HEM1_VIBCH (Q9KQ24) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	32	1.5
42	YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I	31	2.0
43	YBY0_YEAST (P38272) Protein YBR130C	31	2.6
44	RF1_MYCPA (Q73X48) Peptide chain release factor 1 (RF-1)	30	3.3
45	TETX_CLOTE (P04958) Tetanus toxin precursor (EC 3.4.24.68) (Tent...	30	5.7
46	YCF2_PHYPA (P61243) Protein ycf2	30	5.7
47	KCY_THEVO (Q97BV0) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidin...	29	7.5
48	LDLR_RABIT (P20063) Low-density lipoprotein receptor (LDL recept...	29	7.5
49	RF1_RHIME (Q92MK5) Peptide chain release factor 1 (RF-1)	29	9.7
50	ADH8_RANPE (O57380) NADP-dependent alcohol dehydrogenase (EC 1.1...	29	9.7

>TBC15_HUMAN (Q8TC07) TBC1 domain family member 15|
          Length = 691

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKEN--LSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADA 426
           DV RTDRT  FYE ++N  L  L DIL  Y   D D+GY QGMSDL SP++ ++ +E DA
Sbjct: 414 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDA 473

Query: 427 FWCFEKLMRRLRGNFRCTDQSVGVANQLQHLASIIQVLD 543
           FWCF   M ++  NF   +Q  G+  QL  L++++++LD
Sbjct: 474 FWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLD 510

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>TBC15_MOUSE (Q9CXF4) TBC1 domain family member 15|
          Length = 671

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKEN--LSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADA 426
           DV RTDRT  FYE ++N  L  L DIL  Y   D D+GY QGMSDL SP++ ++ +E DA
Sbjct: 397 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDA 456

Query: 427 FWCFEKLMRRLRGNFRCTDQSVGVANQLQHLASIIQVLD 543
           FWCF   M ++  NF   +Q  G+  QL  L++++++LD
Sbjct: 457 FWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLD 493

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>TBC17_MOUSE (Q8BYH7) TBC1 domain family member 17|
          Length = 645

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKEN--LSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADA 426
           DV RTDRT  FYE  EN  LS L DIL  Y     D+GY QGMSDL SP++ ++ +E DA
Sbjct: 378 DVSRTDRTNKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDA 437

Query: 427 FWCFEKLMRRLRGNFRCTDQSVGVANQLQHLASIIQVLD 543
           FWCF   M  + GNF  + ++  +  QL  L  +++VLD
Sbjct: 438 FWCFCGFMELVHGNFEESQET--MKRQLGQLLLLLRVLD 474

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>TBC17_HUMAN (Q9HA65) TBC1 domain family member 17|
          Length = 648

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKEN--LSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADA 426
           DV RTDRT  FYE  EN  L  L DIL  Y     D+GY QGMSDL SP++ ++ +E DA
Sbjct: 378 DVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDA 437

Query: 427 FWCFEKLMRRLRGNFRCTDQSVGVANQLQHLASIIQVLD 543
           FWCF   M  ++GNF  + ++  +  QL  L  +++VLD
Sbjct: 438 FWCFCGFMELVQGNFEESQET--MKRQLGRLLLLLRVLD 474

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>GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 745

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
 Frame = +1

Query: 223 WKLTLHQIGLDVLRTDRTMVFYE-----------------------NKENLSKLWDILAV 333
           WK  L +I  DV R DR +  Y+                          NL KL DIL  
Sbjct: 450 WKDQLFRIEKDVKRNDRNIDIYKYNTSDNLPFPEDTAPTTDDDDSIKNPNLKKLADILTT 509

Query: 334 YAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQ 513
           Y   + ++GY QGM+DL SP+  ++ DE   FWCF   M R+  NF   DQS G+ +Q+ 
Sbjct: 510 YNIFNPNLGYVQGMTDLLSPLYYIIRDEETTFWCFTNFMERMERNF-LRDQS-GIRDQML 567

Query: 514 HLASIIQVL 540
            L  + Q++
Sbjct: 568 ALTDLCQLM 576

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>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 730

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 25/131 (19%)
 Frame = +1

Query: 223 WKLTLHQIGLDVLRTDRTMVF--------------YENKE-----------NLSKLWDIL 327
           W+  L +I  DV RTDR + F              Y+  E           +L +L D+L
Sbjct: 444 WRDQLSRIEKDVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDML 503

Query: 328 AVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQ 507
             Y   +K++GY QGMSDL SP+ V+L D+  AFW F   M R+  N+   DQS G+ NQ
Sbjct: 504 ITYNQHNKNLGYVQGMSDLLSPLYVVLQDDTLAFWAFSAFMERMERNY-LRDQS-GMRNQ 561

Query: 508 LQHLASIIQVL 540
           L  L  ++Q +
Sbjct: 562 LLCLDHLVQFM 572

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>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
 Frame = +1

Query: 223 WKLTLHQIGLDVLRTDRTMVFY--ENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPM 396
           W+     +  DV+RTDR   F+  E+  N+  +  IL  YA  +  VGY QGMSDL +P+
Sbjct: 481 WRNVQFTVDKDVVRTDRNNQFFRGEDNPNVESMRRILLNYAVYNPAVGYSQGMSDLVAPI 540

Query: 397 IVLLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQHLASIIQV 537
           +  + DE+D FWCF  LM+     F  + +   +  QL +L  ++++
Sbjct: 541 LAEVLDESDTFWCFVGLMQNT--IFVSSPRDEDMEKQLLYLRELLRL 585

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>GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 757

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 40/152 (26%)
 Frame = +1

Query: 205 DKQIIE-WKLTLHQIGLDVLRTDRTMVFYENKENLS------------------------ 309
           DK+ ++ WK   H+I  D+ RTDR +  ++NK+ +S                        
Sbjct: 444 DKRSVDFWKDQKHRIEKDINRTDRNLSIFQNKKKISISGVGSDRLPTTRESSPETPDEAD 503

Query: 310 ---------------KLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEK 444
                          K+ +IL  Y   + ++GY QGM+DL SP+ V   DE+  FW F  
Sbjct: 504 DDEFDVSNITNPHLFKMREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDESLTFWAFVN 563

Query: 445 LMRRLRGNFRCTDQSVGVANQLQHLASIIQVL 540
            M R+  NF   DQS G+ NQ+  L  ++Q +
Sbjct: 564 FMDRMERNF-LRDQS-GMKNQMLTLNELVQFM 593

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>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of|
           tre) (RN-tre)
          Length = 828

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = +1

Query: 235 LHQIGLDVLRTDRTMVFYENKENLSK--LWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           + QI LDV RT R  + + ++  + +  L+ +LA Y+  + +VGYCQGMS + + +++ +
Sbjct: 141 IRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYM 200

Query: 409 NDEADAFWCFEKL 447
           N+E DAFW   KL
Sbjct: 201 NEE-DAFWALVKL 212

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>US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein|
          Length = 819

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = +1

Query: 235 LHQIGLDVLRTDRTMVFYENKENLSK--LWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           + QI LDV RT R  + + ++  + +  L+ +LA Y+  + +VGYCQGMS + + +++ +
Sbjct: 141 IRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYM 200

Query: 409 NDEADAFWCFEKL 447
           N+E DAFW   KL
Sbjct: 201 NEE-DAFWALVKL 212

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>GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 746

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +1

Query: 301 NLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRRLRGNFRCT 480
           +L  L +IL  Y   + ++GY QGM+DL SP+ V++ +E   FWCF   M  +  NF   
Sbjct: 509 HLIHLQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNF-LR 567

Query: 481 DQSVGVANQLQHLASIIQVL 540
           DQS G+  Q+  L  ++Q++
Sbjct: 568 DQS-GIHEQMLTLVELVQLM 586

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>GYP2_YEAST (P53258) GTPase-activating protein GYP2 (MAC1-dependent regulator)|
           (MIC1 protein)
          Length = 950

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 24/81 (29%), Positives = 47/81 (58%)
 Frame = +1

Query: 193 ERITDKQIIEWKLTLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQG 372
           ERI ++   +    + +I  D+ R+      Y+ +E + +L ++L  Y+W + DVGYCQ 
Sbjct: 272 ERILNENAGKTSQAIDEIEKDLKRSLPEYSAYQTEEGIQRLRNVLTAYSWKNPDVGYCQA 331

Query: 373 MSDLCSPMIVLLNDEADAFWC 435
           M+ + +  ++ +++E  AFWC
Sbjct: 332 MNIVVAGFLIFMSEE-QAFWC 351

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>GYP1_YEAST (Q08484) GTPase-activating protein GYP1 (GAP for YPT1)|
          Length = 637

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 28/132 (21%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMI---- 399
           T HQI +D+ RT+  +  Y+ K   + L  IL ++A      GY QG++DL +P      
Sbjct: 333 TWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFL 392

Query: 400 -----------VLLND-------------EADAFWCFEKLMRRLRGNFRCTDQSVGVANQ 507
                      V + D             EAD FWC  KL+ ++  N+       G+  Q
Sbjct: 393 TEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNY--IHGQPGILRQ 450

Query: 508 LQHLASIIQVLD 543
           +++L+ +++ +D
Sbjct: 451 VKNLSQLVKRID 462

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>TBCD2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antigen recognized|
           and indentified by SEREX) (PARIS-1)
          Length = 917

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
 Frame = +1

Query: 241 QIGLDVLRTDRTMVFYENKENL-------SKLWDILAVYAWIDKDVGYCQGMSDLCSPMI 399
           QI LD+ RT     F  NK           KL  +L  ++W +  +GYCQG++ L +  +
Sbjct: 669 QIELDLNRT-----FPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIAL 723

Query: 400 VLLNDEADAFWCFEKLMRRLR-GNFRCTDQSVGVANQ--LQHLAS 525
           ++L +E  AFWC   ++  +   ++ C   +    +Q  LQ L S
Sbjct: 724 LVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLS 768

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>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 6)
           (Ubiquitin-specific-processing protease 6)
           (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2)
          Length = 1406

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +1

Query: 235 LHQIGLDVLRTDRTMVFYENKENLSK--LWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           +H I LDV  T R  VF+ ++    +  L+ IL  Y+  + +VGYC+ +S + +  ++ L
Sbjct: 141 IHHIDLDVRTTLRNHVFFRDRYGAKQRELFYILLAYSEYNPEVGYCRDLSHITALFLLYL 200

Query: 409 NDEADAFWCFEKLM 450
            +E DAFW   +L+
Sbjct: 201 PEE-DAFWALVQLL 213

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>TBC12_HUMAN (O60347) TBC1 domain family member 12|
          Length = 769

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = +1

Query: 148 ASTSSNNGIEVDDSAERITDKQIIEWKLTLHQIGLDVLRTDRTM-VFYENKENLSKLWDI 324
           + TSS N  E    A+R         + +L  I LD+ RT  ++ +F +       L  I
Sbjct: 518 SETSSENDTEGVSVADR---------EASLELIKLDISRTFPSLYIFQKGGPYHDVLHSI 568

Query: 325 LAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRR 456
           L  Y     DVGY QGMS + + +I+ L +EADAF  F  L+ +
Sbjct: 569 LGAYTCYRPDVGYVQGMSFIAAVLILNL-EEADAFIAFANLLNK 611

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>YAD4_SCHPO (Q09830) Hypothetical protein C4G8.04 in chromosome I|
          Length = 772

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +1

Query: 241 QIGLDVLRTDRTMVFYENK-ENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDE 417
           QI +D+ RT    VF+  K   + KL  IL  Y+  +  +GYCQGM+ + + +++L   E
Sbjct: 546 QIDMDINRTMAKNVFFGGKGPGIPKLRRILVAYSRHNPHIGYCQGMNVIGAFLLLLYASE 605

Query: 418 ADAFWCFEKLMRRL 459
            DAF+    ++  +
Sbjct: 606 EDAFYMLMSIIENV 619

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>TBC13_MOUSE (Q8R3D1) TBC1 domain family member 13|
          Length = 400

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
 Frame = +1

Query: 322 ILAVYAWIDKDVGYCQGMSDLCSPMIVLL----------NDEADAFWCFEKLMRRLRGNF 471
           IL +YA ++  + Y QGM+++  P+              + EAD F+CF  LM  +R NF
Sbjct: 214 ILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNF 273

Query: 472 --RCTDQSVGVANQLQHLASIIQVLD 543
                D   G+  +++ + S ++  D
Sbjct: 274 IKSLDDSQCGITYKMEKVYSTLKDKD 299

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>TBC14_HUMAN (Q9P2M4) TBC1 domain family member 14|
          Length = 678

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +1

Query: 154 TSSNNGIEVDDSAERITDKQIIEWKLTLHQIGLDVLRTDRTM-VFYENKENLSKLWDILA 330
           ++  + +E +D+     D++      +L  I LD+ RT   + +F +       L  IL 
Sbjct: 426 STGGSEVENEDAGFSAADREA-----SLELIKLDISRTFPNLCIFQQGGPYHDMLHSILG 480

Query: 331 VYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRR 456
            Y     DVGY QGMS + + +I+ L D ADAF  F  L+ +
Sbjct: 481 AYTCYRPDVGYVQGMSFIAAVLILNL-DTADAFIAFSNLLNK 521

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>TBC14_MOUSE (Q8CGA2) TBC1 domain family member 14|
          Length = 679

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +1

Query: 154 TSSNNGIEVDDSAERITDKQIIEWKLTLHQIGLDVLRTDRTM-VFYENKENLSKLWDILA 330
           ++  + +E +D+     D++      +L  I LD+ RT   + +F +       L  IL 
Sbjct: 427 STGGSEVENEDAGFSAADREA-----SLELIKLDISRTFPNLCIFQQGGPYHDMLHSILG 481

Query: 331 VYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRR 456
            Y     DVGY QGMS + + +I+ L D ADAF  F  L+ +
Sbjct: 482 AYTCYRPDVGYVQGMSFIAAVLILNL-DTADAFIAFSNLLNK 522

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>TB22B_MACFA (Q95LL3) TBC1 domain family member 22B|
          Length = 505

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIV--- 402
           T  QI +D+ RT+  +  ++          IL ++A      GY QG++DL +P  V   
Sbjct: 264 TYRQIHIDIPRTNPLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFL 323

Query: 403 --------------------LLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQHLA 522
                               L + EAD+FWC  KL+  ++ N+  T    G+  +++ L 
Sbjct: 324 SEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNY--TFAQPGIQKKVKALE 381

Query: 523 SIIQVLD 543
            ++  +D
Sbjct: 382 ELVSRID 388

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>TB22B_HUMAN (Q9NU19) TBC1 domain family member 22B|
          Length = 505

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIV--- 402
           T  QI +D+ RT+  +  ++          IL ++A      GY QG++DL +P  V   
Sbjct: 264 TYRQIHIDIPRTNPLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFL 323

Query: 403 --------------------LLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQHLA 522
                               L + EAD+FWC  KL+  ++ N+  T    G+  +++ L 
Sbjct: 324 SEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNY--TFAQPGIQKKVKALE 381

Query: 523 SIIQVLD 543
            ++  +D
Sbjct: 382 ELVSRID 388

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>TBCD1_BOVIN (O97790) TBC1 domain family member 1 (Lyncein) (Fragment)|
          Length = 556

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +1

Query: 238 HQIGLDVLRTDRTMVFYENKENLSKL--WDILAVYAWIDKDVGYCQGMSDLCSPMIVLLN 411
           H I +D+ RT  T  +Y  +    +L  ++IL  Y+ +D++VGYCQG+S +   +++ + 
Sbjct: 234 HAILIDLGRTFPTHPYYSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMG 293

Query: 412 DEADAFWCFEKLM 450
           +E +AF   + LM
Sbjct: 294 EE-EAFNMLKFLM 305

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>TBCD1_HUMAN (Q86TI0) TBC1 domain family member 1|
          Length = 1168

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +1

Query: 238  HQIGLDVLRTDRTMVFYENKENLSKL--WDILAVYAWIDKDVGYCQGMSDLCSPMIVLLN 411
            H I +D+ RT  T  ++  +    +L  ++IL  Y+ +D++VGYCQG+S +   +++ ++
Sbjct: 846  HAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMS 905

Query: 412  DEADAFWCFEKLM 450
            +E +AF   + LM
Sbjct: 906  EE-EAFKMLKFLM 917

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>TBCD1_MOUSE (Q60949) TBC1 domain family member 1|
          Length = 1255

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +1

Query: 238  HQIGLDVLRTDRTMVFYENKENLSKL--WDILAVYAWIDKDVGYCQGMSDLCSPMIVLLN 411
            H I +D+ RT  T  ++  +    +L  ++IL  Y+ +D++VGYCQG+S +   +++ ++
Sbjct: 933  HAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMS 992

Query: 412  DEADAFWCFEKLM 450
            +E +AF   + LM
Sbjct: 993  EE-EAFKMLKFLM 1004

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>TBCD8_HUMAN (O95759) TBC1 domain family member 8 (Vascular|
           Rab-GAP/TBC-containing protein) (AD 3)
          Length = 897

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = +1

Query: 229 LTLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           L   +I  D+ R+      ++N+  ++ L  +L  YA  +  +GYCQ M+ L S +++L 
Sbjct: 302 LVTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTS-VLLLY 360

Query: 409 NDEADAFWCFEKLMRRL 459
             E +AFW    +  R+
Sbjct: 361 TKEEEAFWLLVAVCERM 377

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>TB22A_HUMAN (Q8WUA7) TBC1 domain family member 22A|
          Length = 517

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWD-ILAVYAWIDKDVGYCQGMSDLCSPMIV-- 402
           T  QI +D+ R     +  + K  ++++++ IL ++A      GY QG++DL +P  V  
Sbjct: 276 TYRQIHIDIPRMSPEALILQPK--VTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 333

Query: 403 ----------------------LLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQH 516
                                 L N EAD +WC  KL+  ++ N+  T    G+  +++ 
Sbjct: 334 ICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDNY--TFAQPGIQMKVKM 391

Query: 517 LASIIQVLD 543
           L  ++  +D
Sbjct: 392 LEELVSRID 400

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>TBCD4_MOUSE (Q8BYJ6) TBC1 domain family member 4 (Akt substrate of 160 kDa)|
            (AS160)
          Length = 1307

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +1

Query: 238  HQIGLDVLRTDRTMVFYENKENLSKL--WDILAVYAWIDKDVGYCQGMSDLCSPMIVLLN 411
            H I +D+ RT  T  ++  +    +L  +++L  Y+ +DK+VGYCQG+S +   +++ ++
Sbjct: 973  HAILVDLGRTFPTHPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMS 1032

Query: 412  DEADAFWCFEKLM 450
            +E  AF   + LM
Sbjct: 1033 EE-QAFEMLKFLM 1044

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>TB22A_MOUSE (Q8R5A6) TBC1 domain family member 22A|
          Length = 516

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWD-ILAVYAWIDKDVGYCQGMSDLCSPMIV-- 402
           T  QI +D+ R     +  + K  ++++++ IL ++A      GY QG++DL +P  V  
Sbjct: 275 TYRQIHIDIPRMSPEALILQPK--VTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 332

Query: 403 ----------------------LLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQH 516
                                 L N EAD +WC  KL+  ++ N+  T    G+  +++ 
Sbjct: 333 ICEYTDREDVDKVDVSSVPAEVLRNIEADTYWCMSKLLDGIQDNY--TFAQPGIQMKVKM 390

Query: 517 LASIIQVLD 543
           L  ++  +D
Sbjct: 391 LEELVSRID 399

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>TBCD8_MOUSE (Q9Z1A9) TBC1 domain family member 8 (Vascular|
           Rab-GAP/TBC-containing protein) (BUB2-like protein 1)
          Length = 891

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = +1

Query: 229 LTLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           L   +I  D+ R+      ++N+  ++ L  +L  YA  +  +GYCQ M+ L S +++L 
Sbjct: 301 LVTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTS-VLLLY 359

Query: 409 NDEADAFWCFEKLMRRL 459
             E +AFW    +  R+
Sbjct: 360 AKEEEAFWLLVAVCERM 376

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>TB22A_MACFA (Q95KI1) TBC1 domain family member 22A (Fragment)|
          Length = 497

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
 Frame = +1

Query: 232 TLHQIGLDVLRTDRTMVFYENKENLSKLWD-ILAVYAWIDKDVGYCQGMSDLCSPMIV-- 402
           T  QI +D+ R     +  + K  ++++++ IL ++A      GY QG++DL +P  V  
Sbjct: 256 TYRQIHIDIPRMSPEALILQPK--VTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 313

Query: 403 ----------------------LLNDEADAFWCFEKLMRRLRGNFRCTDQSVGVANQLQH 516
                                 L N EAD +WC  KL+  ++ N+  T    G+  +++ 
Sbjct: 314 ICEYIEAEEVDTVDVSGVPAEVLRNIEADTYWCMSKLLDGIQDNY--TFAQPGIQMKVKM 371

Query: 517 LASIIQVLD 543
           L  ++  +D
Sbjct: 372 LEELVSRID 380

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>TBCD3_HUMAN (Q8IZP1) TBC1 domain family member 3 (Rab GTPase-activating protein|
           PRC17) (Prostate cancer gene 17 protein) (TRE17 alpha
           protein)
          Length = 549

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
 Frame = +1

Query: 235 LHQIGLDVLRTDRTMVFYENKENLSK--LWDILAVYAWIDKDVGYCQGMSDLCSPMIVLL 408
           + +I  DV  T R  +F+ ++    +  L  IL  Y   + +VGYC+ +S + +  ++ L
Sbjct: 142 IQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYL 201

Query: 409 NDEADAFWCFEKLM----RRLRGNFRCTDQSV-GVANQLQHLASIIQ 534
            +E DAFW   +L+      L+G       +V G+ +Q +H+ +  Q
Sbjct: 202 PEE-DAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQ 247

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>TBCD4_HUMAN (O60343) TBC1 domain family member 4 (Akt substrate of 160 kDa)|
            (AS160)
          Length = 1298

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +1

Query: 238  HQIGLDVLRTDRTMVFYENKENLSKL--WDILAVYAWIDKDVGYCQGMSDLCSPMIVLLN 411
            H I +D+ RT  T  ++  +    +L  +++L  Y+ +DK+VGYCQG+S +   +++ ++
Sbjct: 964  HAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMS 1023

Query: 412  DEADAFWCFEKLM 450
            +E  AF   + LM
Sbjct: 1024 EE-QAFEMLKFLM 1035

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>TBCD5_HUMAN (Q92609) TBC1 domain family member 5|
          Length = 795

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAF 429
           DV RT   M F++ +     L D+L  YA  ++ + Y QGM +L +P++ +L+ +  AF
Sbjct: 166 DVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAF 224

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>TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5|
          Length = 815

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 21/59 (35%), Positives = 33/59 (55%)
 Frame = +1

Query: 253 DVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAF 429
           DV RT   M F++ +     L D+L  YA  ++ + Y QGM +L +P+I  L+ +  AF
Sbjct: 166 DVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCDHQAF 224

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>CJ006_HUMAN (Q8IX21) Protein C10orf6|
          Length = 1173

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
 Frame = +1

Query: 7   KEECREMDSHVGSGKVITAPLITEDGRPIKDPLVLLE---------ATSNQNTSDGASTS 159
           K +  + DS+V SGK+   PL +E G P K P   LE         A S++  S+G S+ 
Sbjct: 525 KAKTNKADSNVSSGKISGGPLRSEYGTPTKSPPAALEVVPCIPSPAAPSDKAPSEGESSG 584

Query: 160 SNN 168
           ++N
Sbjct: 585 NSN 587

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>CJ006_PONPY (Q5REF4) Protein C10orf6 homolog|
          Length = 1174

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
 Frame = +1

Query: 7   KEECREMDSHVGSGKVITAPLITEDGRPIKDPLVLLE---------ATSNQNTSDGASTS 159
           K +  + DS+V SGK+   PL +E G P K P   LE         A S++  S+  S+ 
Sbjct: 526 KAKTNKADSNVSSGKISGGPLCSEYGAPTKSPPAALEVVPCVPSPAAPSDKAPSERESSG 585

Query: 160 SNN 168
           ++N
Sbjct: 586 NSN 588

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>YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II|
          Length = 330

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +1

Query: 235 LHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLND 414
           + QI LD+ RT     F + +     L   L   A     VGYCQG++ +   +++++ND
Sbjct: 110 IKQIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVND 169

Query: 415 EADA 426
           E+ A
Sbjct: 170 ESRA 173

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>MSB4_YEAST (Q12317) GTPase-activating protein MSB4 (Multicopy suppressor of|
           bud emergence 4)
          Length = 492

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 322 ILAVYAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFW 432
           +L  ++  DK +GYCQ M+ L   +++L  +E  AFW
Sbjct: 227 VLMAFSVYDKTIGYCQSMNFLVG-LLLLFMEEEKAFW 262

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>GYP3_YEAST (P48566) GTPase-activating protein GYP3 (Protein MSB3) (Multicopy|
           suppressor of bud emergence 3)
          Length = 633

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
 Frame = +1

Query: 250 LDVLRTDRTMVFYEN---------KEN---LSKLWDILAVYAWIDKDVGYCQGMSDLCSP 393
           LD++  D    F +N         KE    +  L  +L  ++  +  +GYCQ M+ L   
Sbjct: 273 LDIIERDLNRTFPDNIHFQSSLHNKEGPPIIKSLRRVLVAFSLYNPKIGYCQSMNFLAG- 331

Query: 394 MIVLLNDEADAFW 432
           +++L  DE  AFW
Sbjct: 332 LLLLFLDEERAFW 344

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>HEM1_VIBCH (Q9KQ24) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 419

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 88  PIKDPLVLLEATSNQNTSDGASTSSNNGIEVDDSAERITDKQIIEWKLTLHQIGLDVLR 264
           P K  L L + +++ +   G   S+ N  E+       +  ++IEW    HQ+ LD L+
Sbjct: 25  PEKLSLALNQLSTSSHVKGGVILSTCNRTEIYCDVRSASKNKVIEWLSQFHQVSLDELK 83

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>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I|
          Length = 1261

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 23/79 (29%), Positives = 37/79 (46%)
 Frame = +1

Query: 16  CREMDSHVGSGKVITAPLITEDGRPIKDPLVLLEATSNQNTSDGASTSSNNGIEVDDSAE 195
           C ++D       + T+PL TE    + DPL L   T N   S  AS S N+    ++  +
Sbjct: 127 CGDVDDEQQFNSLATSPLSTETQSEVSDPL-LDTLTPNSLESSFASISLNSFTSANEFIQ 185

Query: 196 RITDKQIIEWKLTLHQIGL 252
            +  K++   KL++H   L
Sbjct: 186 FL--KRLASSKLSIHTFDL 202

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>YBY0_YEAST (P38272) Protein YBR130C|
          Length = 425

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
 Frame = +1

Query: 91  IKDPLVLLEAT-SNQNTSDGASTSSNNGIEV-----DDSAERI----TDKQIIEWKLTLH 240
           + + + LLE   SNQN + G+ TSSN+ IE+     +DS + +    T+K     K+  H
Sbjct: 179 LNEKIGLLELELSNQNLNYGSDTSSNSDIELNLNKFNDSVKDLKSLETEKDSKLSKIITH 238

Query: 241 QIGLDVLRTDRTMVFYENKENL 306
              LD L     +  Y+  ENL
Sbjct: 239 --SLDELNLQSWLNLYQTNENL 258

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>RF1_MYCPA (Q73X48) Peptide chain release factor 1 (RF-1)|
          Length = 357

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
 Frame = +1

Query: 31  SHVGSGKVITAP----LITEDGRPIKDPLVLLEATSNQNTSDGASTSSNNGIEVDDSAER 198
           +H+ +G V+T       +    R ++     L+A + +  S  AS    + I   D +ER
Sbjct: 248 THLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSER 307

Query: 199 ITDKQIIEWKLTLHQIGLDVLRTDRTMVFYENKENLSKLWDILA 330
           I      E ++T H+IG      D+ +       +L  L+D LA
Sbjct: 308 IRTYNFPENRITDHRIGFKAHNLDQVL-----DGDLDALFDALA 346

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>TETX_CLOTE (P04958) Tetanus toxin precursor (EC 3.4.24.68) (Tentoxylysin)|
           [Contains: Tetanus toxin light chain (Tetanus toxin
           chain L); Tetanus toxin heavy chain (Tetanus toxin chain
           H)]
          Length = 1314

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 461 RNLRINFSKHQNASASSLSSTIIGEHKSLIP*Q*PTSLSIHAYTARIS 318
           +N+R+N +  +N   S L S +IG  K +IP   PT++  + Y    S
Sbjct: 413 QNMRVNTNAFRNVDGSGLVSKLIGLCKKIIP---PTNIRENLYNRTAS 457

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>YCF2_PHYPA (P61243) Protein ycf2|
          Length = 2259

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 127  NQNTSDGASTSSNNGIEVDDSAERITDKQ-IIEWKLTLHQIGLDVLRTDRTMVFYENKEN 303
            N+NT         N I + +  + I +K  II+W   L++    +      ++FYEN  N
Sbjct: 834  NKNTFKFFIKKQRNLIVLSNKTKFIDNKNSIIKWSKKLNKKNTYIFYKTFLVIFYENFNN 893

Query: 304  LSKL 315
            +SKL
Sbjct: 894  ISKL 897

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>KCY_THEVO (Q97BV0) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine|
           monophosphate kinase) (CMP kinase)
          Length = 190

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 157 SSNNGIEVDDSAERITDKQIIEWKLTLHQIGLDV 258
           S+  GIE+D++A+ + +++I E K  L   G+D+
Sbjct: 112 SNREGIEIDEAAKLLDEREISEKKRYLDLYGIDI 145

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>LDLR_RABIT (P20063) Low-density lipoprotein receptor (LDL receptor) (Fragment)|
          Length = 837

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 334 YAWIDKDVGYCQGMSDLCSPMIVLLNDEADAFWCFEKLMRRLRGNFRCTDQ 486
           Y W+      CQ  SD      + L  ++D F C  +L R + G+++C  Q
Sbjct: 29  YKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIPGHWKCDGQ 79

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>RF1_RHIME (Q92MK5) Peptide chain release factor 1 (RF-1)|
          Length = 360

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +1

Query: 31  SHVGSGKVITAPLITEDGRPIKDPLVL---LEATSNQNTSDGASTSSNNGIEVDDSAERI 201
           +H+ +G V+T+   ++     K   VL   L     Q      S    + +   D +ERI
Sbjct: 247 THIPTGIVVTSSEKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRSQVGSGDRSERI 306

Query: 202 TDKQIIEWKLTLHQIGLDVLRTDRTM 279
                 + +LT H+I L + + DR M
Sbjct: 307 RTYNFPQGRLTDHRINLTLYKLDRMM 332

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>ADH8_RANPE (O57380) NADP-dependent alcohol dehydrogenase (EC 1.1.1.2)|
          Length = 372

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 31  SHVGSGKVITAPLITEDGRPIKDPLVLLEATSNQNTSDGASTSSNNGIEVDD-SAERITD 207
           ++ GSG  +   L + + R   DPL+LL   S + +  G          VDD   ++I  
Sbjct: 281 TYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINV 340

Query: 208 KQIIEWKLTLHQI 246
             ++  KLTL QI
Sbjct: 341 NFLVSTKLTLDQI 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,696,037
Number of Sequences: 219361
Number of extensions: 1393290
Number of successful extensions: 4253
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4241
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result