ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20c13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK121393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 577 e-161
2gb|AY110881.1| Zea mays CL4521_1 mRNA sequence 230 4e-57
3gb|AY109145.1| Zea mays PCO088682 mRNA sequence 224 2e-55
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
5dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
6dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
7dbj|AK065976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
8gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome... 117 4e-23
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 117 4e-23
11ref|NM_124859.3| Arabidopsis thaliana unknown protein AT5G54780 ... 70 8e-09
12gb|AY110194.1| Zea mays CL62128_1 mRNA sequence 56 1e-04
13ref|XM_468334.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
14gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete se... 50 0.008
15dbj|AK071602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
16ref|NM_118844.2| Arabidopsis thaliana unknown protein AT4G27100 ... 48 0.030
17ref|NM_001036653.1| Arabidopsis thaliana unknown protein AT4G271... 48 0.030
18ref|XM_660310.1| Cryptosporidium hominis TU502 hypothetical prot... 48 0.030
19gb|AY142502.1| Arabidopsis thaliana unknown protein (At4g27100) ... 48 0.030
20dbj|AK221621.1| Arabidopsis thaliana mRNA for hypothetical prote... 48 0.030
21ref|XM_549801.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
23dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
24dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
25gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, comp... 44 0.47
26ref|NM_123559.3| Arabidopsis thaliana unknown protein AT5G41940 ... 44 0.47
27gb|AC102862.7| Mus musculus chromosome 8, clone RP24-535D22, com... 44 0.47
28emb|BX842280.1|CNS0A086 Arabidopsis thaliana Full-length cDNA Co... 44 0.47
29dbj|AK176436.1| Arabidopsis thaliana mRNA for GTPase activator p... 44 0.47
30dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.47
31ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 ... 42 1.9
32emb|BX119904.4| Human DNA sequence from clone RP11-232D9 on chro... 42 1.9
33emb|AL591602.7| Human DNA sequence from clone RP5-1092E23 on chr... 42 1.9
34gb|AC016885.16| Homo sapiens chromosome 8, clone RP11-388K12, co... 42 1.9
35gb|AC121251.2| Homo sapiens chromosome 3 clone RP11-143O1, compl... 42 1.9
36gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 42 1.9
37ref|XM_688957.1| PREDICTED: Danio rerio similar to GH regulated ... 42 1.9
38ref|XM_688708.1| PREDICTED: Danio rerio similar to GH regulated ... 42 1.9
39dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator p... 42 1.9
40gb|AC158361.3| Mus musculus BAC clone RP23-227A12 from chromosom... 42 1.9
41gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 42 1.9
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
43emb|BX831263.1|CNS0A1Q7 Arabidopsis thaliana Full-length cDNA Co... 42 1.9
44dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
45emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on ch... 42 1.9
46dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.9
47gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complet... 42 1.9
48gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosom... 42 1.9
49emb|AL928846.4| Human DNA sequence from clone RP11-9I7 on chromo... 42 1.9
50emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chr... 42 1.9
51ref|NM_129910.1| Arabidopsis thaliana unknown protein AT2G43490 ... 40 7.4
52ref|NM_201567.1| Homo sapiens cell division cycle 25A (CDC25A), ... 40 7.4
53gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome 40 7.4
54ref|XM_598423.2| PREDICTED: Bos taurus similar to cell division ... 40 7.4
55gb|AY429356.1| Arabidopsis thaliana At2g43490 mRNA, partial sequ... 40 7.4
56gb|AY429355.1| Arabidopsis thaliana At2g43490 mRNA, partial sequ... 40 7.4
57emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in... 40 7.4
58gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosom... 40 7.4
59gb|AC122012.3| Mus musculus BAC clone RP24-353N4 from 5, complet... 40 7.4
60gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, comple... 40 7.4
61ref|XM_662772.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.4
62gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 40 7.4
63emb|AL139384.17| Human DNA sequence from clone RP11-88E10 on chr... 40 7.4
64gb|AY137580.1| Homo sapiens cell division cycle protein 25A spli... 40 7.4
65emb|BX571863.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 7.4
66emb|AJ235272.1|RPXX03 Rickettsia prowazekii strain Madrid E, com... 40 7.4
67gb|DQ445142.1| Beta vulgaris chromosome 9 clone BAC123 genomic s... 40 7.4
68gb|AC160143.4| Pan troglodytes BAC clone CH251-565M18 from chrom... 40 7.4
69gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, compl... 40 7.4
70dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 7.4
71ref|XM_625792.1| Cryptosporidium parvum Iowa II TBC domain conta... 40 7.4
72gb|AF212831.2|AF212831 Homo sapiens chromosome 21 clone BAC R-45... 40 7.4
73dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
74gb|AF277722.1|AF277722 Homo sapiens cell division cycle 25A spli... 40 7.4
75dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
76dbj|BS000031.1| Pan troglodytes chromosome 22 clone:PTB-082B23, ... 40 7.4
77dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.4
78dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
79emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013 40 7.4
80gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, comple... 40 7.4

>dbj|AK121393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129N03, full
            insert sequence
          Length = 2102

 Score =  577 bits (291), Expect = e-161
 Identities = 474/535 (88%)
 Strand = Plus / Plus

                                                                        
Query: 5    ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
            |||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 657  ggaaggaagactgccgagagatggattctcatgttggtagcgggaaagtgatcacagcac 716

                                                                        
Query: 65   cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
            || | |||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 717  cattaatcactgaggatggtagacccatcaaagaccctttggttttactcgaggctactt 776

                                                                        
Query: 125  caaaccaaaacacctcagacggtgcttcaactagcagcaacaatggaattgaagtagacg 184
            ||  | ||||||| ||||||||| ||||||| |||||||  ||||||| |||| |||| |
Sbjct: 777  catccgaaaacacatcagacggtacttcaacaagcagcacaaatggaaatgaaatagatg 836

                                                                        
Query: 185  attctgcagagcgtattactgacaagcaaattattgagtggaagcttacattacatcaaa 244
            | ||||||   |||||||| || ||||  |||||||| ||||||||||| || |||||||
Sbjct: 837  aatctgcaagccgtattacagataagctcattattgactggaagcttactttgcatcaaa 896

                                                                        
Query: 245  ttggacttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatc 304
            |||||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||
Sbjct: 897  ttggacttgatgtgctacgtacggaccgcactatggtattttatgagaacaaagaaaatc 956

                                                                        
Query: 305  tttcaaagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttact 364
            |||| ||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 957  tttccaagttgtgggatattctagctgtgtatgcttggattgataaagatgttggttact 1016

                                                                        
Query: 365  gtcaaggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatg 424
            ||||||||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||
Sbjct: 1017 gtcaaggaatgagcgatttatgctcgccaatgatcgtgctactcaaggatgaagcagatg 1076

                                                                        
Query: 425  cgttttggtgctttgagaaattgatgcgtagattgcgaggaaatttcagatgcacagatc 484
            | ||||||||||||||||||||||||||||||||| ||||||||| || |||||| ||||
Sbjct: 1077 ccttttggtgctttgagaaattgatgcgtagattgagaggaaattccaaatgcacggatc 1136

                                                                   
Query: 485  aatcagtcggggttgctaaccaacttcagcaccttgcatccattattcaggtgct 539
            |||| || || || ||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 1137 aatctgtgggtgtggctaatcaacttcagtaccttgcatctattattcaggtgct 1191



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>gb|AY110881.1| Zea mays CL4521_1 mRNA sequence
          Length = 1181

 Score =  230 bits (116), Expect = 4e-57
 Identities = 177/196 (90%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 341 ggattgacaaagatgttggttactgtcaaggaatgagtgatttatgctcaccgatgattg 400
           ||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |
Sbjct: 16  ggattgacaaagatgttggtt-ctgccaaggaatgagtgatttatgctcaccaatgatag 74

                                                                       
Query: 401 tgctactcaatgatgaggcagatgcgttttggtgctttgagaaattgatgcgtagattgc 460
           | ||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 75  ttctactaaaggatgaagcagatgccttttggtgctttgagaaattgatgcgtagattgc 134

                                                                       
Query: 461 gaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcaccttg 520
           |||||||||||| ||||||||||||||| || || ||  | ||||||||||| || ||||
Sbjct: 135 gaggaaatttcaaatgcacagatcaatctgtgggagtatccaaccaacttcaacatcttg 194

                           
Query: 521 catccattattcaggt 536
           |||| |||||||||||
Sbjct: 195 catctattattcaggt 210



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>gb|AY109145.1| Zea mays PCO088682 mRNA sequence
          Length = 545

 Score =  224 bits (113), Expect = 2e-55
 Identities = 218/253 (86%)
 Strand = Plus / Plus

                                                                       
Query: 287 acgagaacaaggaaaatctttcaaagttatgggatattctagccgtgtatgcatggattg 346
           |||||||||| || ||  |||||||||| ||||||||||| || || ||||||||||| |
Sbjct: 3   acgagaacaaagataacatttcaaagttgtgggatattcttgctgtctatgcatggatcg 62

                                                                       
Query: 347 acaaagatgttggttactgtcaaggaatgagtgatttatgctcaccgatgattgtgctac 406
           ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 63  acaaagaagttggttattgtcaaggaatgagtgatttatgttcacccatgatagtgctac 122

                                                                       
Query: 407 tcaatgatgaggcagatgcgttttggtgctttgagaaattgatgcgtagattgcgaggaa 466
           || |  |||| |||||||| |||||||||||||||| ||||||||||||| ||||||| |
Sbjct: 123 tccacaatgaagcagatgcattttggtgctttgagagattgatgcgtagactgcgaggta 182

                                                                       
Query: 467 atttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcaccttgcatcca 526
           |||||||||||||| | || || || ||||| |  ||||| |||||||| ||||| || |
Sbjct: 183 atttcagatgcacacaacagtctgttggggtggaaaaccagcttcagcatcttgcttcta 242

                        
Query: 527 ttattcaggtgct 539
           | |||||||||||
Sbjct: 243 tcattcaggtgct 255



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Plus

                                                                            
Query: 5        ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
                |||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 20362246 ggaaggaagactgccgagagatggattctcatgttggtagcgggaaagtgatcacagcac 20362305

                                                                            
Query: 65       cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
                || | |||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 20362306 cattaatcactgaggatggtagacccatcaaagaccctttggttttactcgaggctactt 20362365

                                                                            
Query: 125      caaaccaaaacacctcagacggtgcttcaactagcagcaacaatggaattgaagtagacg 184
                ||  | ||||||| ||||||||| ||||||| |||||||  ||||||| |||| |||| |
Sbjct: 20362366 catccgaaaacacatcagacggtacttcaacaagcagcacaaatggaaatgaaatagatg 20362425

                                                                            
Query: 185      attctgcagagcgtattactgacaagcaaattattgagtggaagcttacattacatcaaa 244
                | ||||||   |||||||| || ||||  |||||||| ||||||||||| || |||||||
Sbjct: 20362426 aatctgcaagccgtattacagataagctcattattgactggaagcttactttgcatcaaa 20362485

                    
Query: 245      ttgg 248
                ||||
Sbjct: 20362486 ttgg 20362489



 Score =  168 bits (85), Expect = 1e-38
 Identities = 115/125 (92%)
 Strand = Plus / Plus

                                                                            
Query: 247      ggacttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctt 306
                |||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 20362575 ggacttgatgtgctacgtacggaccgcactatggtattttatgagaacaaagaaaatctt 20362634

                                                                            
Query: 307      tcaaagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgt 366
                || ||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 20362635 tccaagttgtgggatattctagctgtgtatgcttggattgataaagatgttggttactgt 20362694

                     
Query: 367      caagg 371
                |||||
Sbjct: 20362695 caagg 20362699



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                            
Query: 369      aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
                ||||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 20362777 aggaatgagcgatttatgctcgccaatgatcgtgctactcaaggatgaagcagatgcctt 20362836

                                               
Query: 429      ttggtgctttgagaaattgatgcgtagattg 459
                |||||||||||||||||||||||||||||||
Sbjct: 20362837 ttggtgctttgagaaattgatgcgtagattg 20362867



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 461      gaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcaccttg 520
                |||||||||||| |||||| |||||||| || || || ||||| ||||||||| ||||||
Sbjct: 20363017 gaggaaatttcaaatgcacggatcaatctgtgggtgtggctaatcaacttcagtaccttg 20363076

                                   
Query: 521      catccattattcaggtgct 539
                |||| ||||||||||||||
Sbjct: 20363077 catctattattcaggtgct 20363095



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>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0052O11
          Length = 106467

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Plus

                                                                          
Query: 5      ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
              |||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 104857 ggaaggaagactgccgagagatggattctcatgttggtagcgggaaagtgatcacagcac 104916

                                                                          
Query: 65     cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
              || | |||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 104917 cattaatcactgaggatggtagacccatcaaagaccctttggttttactcgaggctactt 104976

                                                                          
Query: 125    caaaccaaaacacctcagacggtgcttcaactagcagcaacaatggaattgaagtagacg 184
              ||  | ||||||| ||||||||| ||||||| |||||||  ||||||| |||| |||| |
Sbjct: 104977 catccgaaaacacatcagacggtacttcaacaagcagcacaaatggaaatgaaatagatg 105036

                                                                          
Query: 185    attctgcagagcgtattactgacaagcaaattattgagtggaagcttacattacatcaaa 244
              | ||||||   |||||||| || ||||  |||||||| ||||||||||| || |||||||
Sbjct: 105037 aatctgcaagccgtattacagataagctcattattgactggaagcttactttgcatcaaa 105096

                  
Query: 245    ttgg 248
              ||||
Sbjct: 105097 ttgg 105100



 Score =  168 bits (85), Expect = 1e-38
 Identities = 115/125 (92%)
 Strand = Plus / Plus

                                                                          
Query: 247    ggacttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctt 306
              |||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 105186 ggacttgatgtgctacgtacggaccgcactatggtattttatgagaacaaagaaaatctt 105245

                                                                          
Query: 307    tcaaagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgt 366
              || ||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 105246 tccaagttgtgggatattctagctgtgtatgcttggattgataaagatgttggttactgt 105305

                   
Query: 367    caagg 371
              |||||
Sbjct: 105306 caagg 105310



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                          
Query: 369    aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
              ||||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 105388 aggaatgagcgatttatgctcgccaatgatcgtgctactcaaggatgaagcagatgcctt 105447

                                             
Query: 429    ttggtgctttgagaaattgatgcgtagattg 459
              |||||||||||||||||||||||||||||||
Sbjct: 105448 ttggtgctttgagaaattgatgcgtagattg 105478



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                          
Query: 461    gaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcaccttg 520
              |||||||||||| |||||| |||||||| || || || ||||| ||||||||| ||||||
Sbjct: 105628 gaggaaatttcaaatgcacggatcaatctgtgggtgtggctaatcaacttcagtaccttg 105687

                                 
Query: 521    catccattattcaggtgct 539
              |||| ||||||||||||||
Sbjct: 105688 catctattattcaggtgct 105706



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>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0678G09
          Length = 139220

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Plus

                                                                         
Query: 5     ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
             |||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 71146 ggaaggaagactgccgagagatggattctcatgttggtagcgggaaagtgatcacagcac 71205

                                                                         
Query: 65    cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
             || | |||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 71206 cattaatcactgaggatggtagacccatcaaagaccctttggttttactcgaggctactt 71265

                                                                         
Query: 125   caaaccaaaacacctcagacggtgcttcaactagcagcaacaatggaattgaagtagacg 184
             ||  | ||||||| ||||||||| ||||||| |||||||  ||||||| |||| |||| |
Sbjct: 71266 catccgaaaacacatcagacggtacttcaacaagcagcacaaatggaaatgaaatagatg 71325

                                                                         
Query: 185   attctgcagagcgtattactgacaagcaaattattgagtggaagcttacattacatcaaa 244
             | ||||||   |||||||| || ||||  |||||||| ||||||||||| || |||||||
Sbjct: 71326 aatctgcaagccgtattacagataagctcattattgactggaagcttactttgcatcaaa 71385

                 
Query: 245   ttgg 248
             ||||
Sbjct: 71386 ttgg 71389



 Score =  168 bits (85), Expect = 1e-38
 Identities = 115/125 (92%)
 Strand = Plus / Plus

                                                                         
Query: 247   ggacttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctt 306
             |||||||| ||||||||||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 71475 ggacttgatgtgctacgtacggaccgcactatggtattttatgagaacaaagaaaatctt 71534

                                                                         
Query: 307   tcaaagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgt 366
             || ||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 71535 tccaagttgtgggatattctagctgtgtatgcttggattgataaagatgttggttactgt 71594

                  
Query: 367   caagg 371
             |||||
Sbjct: 71595 caagg 71599



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                         
Query: 369   aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
             ||||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 71677 aggaatgagcgatttatgctcgccaatgatcgtgctactcaaggatgaagcagatgcctt 71736

                                            
Query: 429   ttggtgctttgagaaattgatgcgtagattg 459
             |||||||||||||||||||||||||||||||
Sbjct: 71737 ttggtgctttgagaaattgatgcgtagattg 71767



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                         
Query: 461   gaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcaccttg 520
             |||||||||||| |||||| |||||||| || || || ||||| ||||||||| ||||||
Sbjct: 71917 gaggaaatttcaaatgcacggatcaatctgtgggtgtggctaatcaacttcagtaccttg 71976

                                
Query: 521   catccattattcaggtgct 539
             |||| ||||||||||||||
Sbjct: 71977 catctattattcaggtgct 71995



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>dbj|AK065976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047L05, full
           insert sequence
          Length = 1717

 Score =  218 bits (110), Expect = 1e-53
 Identities = 212/246 (86%)
 Strand = Plus / Plus

                                                                       
Query: 211 caaattattgagtggaagcttacattacatcaaattggacttgacgtgctacgtactgac 270
           |||||||| || |||||||||    ||||||||||||| ||||| ||||| || ||||| 
Sbjct: 702 caaattatcgaatggaagcttttgctacatcaaattggccttgatgtgctgcgcactgat 761

                                                                       
Query: 271 cgcaccatggtattttacgagaacaaggaaaatctttcaaagttatgggatattctagcc 330
           ||  ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| || 
Sbjct: 762 cgatccatggtgttttatgagaacaaagaaaatctttcgaagttatgggatattcttgct 821

                                                                       
Query: 331 gtgtatgcatggattgacaaagatgttggttactgtcaaggaatgagtgatttatgctca 390
           || ||||| ||||| ||||||||  |||| || |||||||||||||||||||||||||||
Sbjct: 822 gtatatgcttggatcgacaaagaaattggctattgtcaaggaatgagtgatttatgctca 881

                                                                       
Query: 391 ccgatgattgtgctactcaatgatgaggcagatgcgttttggtgctttgagaaattgatg 450
           |||||||| ||||| ||||| || || |||||||| |||||||||||||||| ||| |||
Sbjct: 882 ccgatgatagtgctgctcaacgacgaagcagatgcattttggtgctttgagagattaatg 941

                 
Query: 451 cgtaga 456
           ||||||
Sbjct: 942 cgtaga 947



 Score =  109 bits (55), Expect = 1e-20
 Identities = 109/127 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
           ||||| ||||||||  ||| ||||| || ||||||||||| ||| || |||||||||| |
Sbjct: 496 ggaagcaagaatgcaaagatatggactcccatgttggtagcggtgaaattatcacagccc 555

                                                                       
Query: 65  cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
           || |||| ||||||||||||| ||||||||| |||||||||||||| || || |||||||
Sbjct: 556 caattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctactt 615

                  
Query: 125 caaacca 131
           || ||||
Sbjct: 616 cagacca 622



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>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029K08, complete sequence
          Length = 136687

 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                         
Query: 5     ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
             ||||| ||||||||  ||| ||||| || ||||||||||| |||||| |||||||||| |
Sbjct: 73269 ggaagcaagaatgcaaagatatggactcccatgttggtagcggtaaaattatcacagccc 73210

                                                                         
Query: 65    cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
             || |||| ||||||||||||| ||||||||| |||||||||||||| || || |||||||
Sbjct: 73209 caattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctactt 73150

                    
Query: 125   caaacca 131
             || ||||
Sbjct: 73149 cagacca 73143



 Score =  111 bits (56), Expect = 2e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 369   aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
             |||||||||||||||||||||||||||||| ||||| ||||| || || |||||||| ||
Sbjct: 72712 aggaatgagtgatttatgctcaccgatgatagtgctgctcaacgacgaagcagatgcatt 72653

                                         
Query: 429   ttggtgctttgagaaattgatgcgtaga 456
             |||||||||||||| ||| |||||||||
Sbjct: 72652 ttggtgctttgagagattaatgcgtaga 72625



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                         
Query: 250   cttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctttca 309
             ||||| ||||| || ||||| ||  ||||||| ||||| |||||||| ||||||||||| 
Sbjct: 72918 cttgatgtgctgcgcactgatcgatccatggtgttttatgagaacaaagaaaatctttcg 72859

                                                                         
Query: 310   aagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaa 369
             ||||||||||||||||| || || ||||| ||||| ||||||||  |||| || ||||||
Sbjct: 72858 aagttatgggatattcttgctgtatatgcttggatcgacaaagaaattggctattgtcaa 72799

               
Query: 370   gg 371
             ||
Sbjct: 72798 gg 72797



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                         
Query: 459   gcgaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcacct 518
             |||||||||||||||||||||| | ||||| || ||||| |  ||||| |||||||||||
Sbjct: 72547 gcgaggaaatttcagatgcacacagcaatctgttggggtggagaaccagcttcagcacct 72488

                                  
Query: 519   tgcatccattattcaggtgct 539
             ||| || || ||||| |||||
Sbjct: 72487 tgcgtctatcattcaagtgct 72467



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                            
Query: 5        ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
                ||||| ||||||||  ||| ||||| || ||||||||||| |||||| |||||||||| |
Sbjct: 21415519 ggaagcaagaatgcaaagatatggactcccatgttggtagcggtaaaattatcacagccc 21415460

                                                                            
Query: 65       cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
                || |||| ||||||||||||| ||||||||| |||||||||||||| || || |||||||
Sbjct: 21415459 caattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctactt 21415400

                       
Query: 125      caaacca 131
                || ||||
Sbjct: 21415399 cagacca 21415393



 Score =  111 bits (56), Expect = 2e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                            
Query: 369      aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
                |||||||||||||||||||||||||||||| ||||| ||||| || || |||||||| ||
Sbjct: 21414962 aggaatgagtgatttatgctcaccgatgatagtgctgctcaacgacgaagcagatgcatt 21414903

                                            
Query: 429      ttggtgctttgagaaattgatgcgtaga 456
                |||||||||||||| ||| |||||||||
Sbjct: 21414902 ttggtgctttgagagattaatgcgtaga 21414875



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                            
Query: 250      cttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctttca 309
                ||||| ||||| || ||||| ||  ||||||| ||||| |||||||| ||||||||||| 
Sbjct: 21415168 cttgatgtgctgcgcactgatcgatccatggtgttttatgagaacaaagaaaatctttcg 21415109

                                                                            
Query: 310      aagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaa 369
                ||||||||||||||||| || || ||||| ||||| ||||||||  |||| || ||||||
Sbjct: 21415108 aagttatgggatattcttgctgtatatgcttggatcgacaaagaaattggctattgtcaa 21415049

                  
Query: 370      gg 371
                ||
Sbjct: 21415048 gg 21415047



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                            
Query: 459      gcgaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcacct 518
                |||||||||||||||||||||| | ||||| || ||||| |  ||||| |||||||||||
Sbjct: 21414797 gcgaggaaatttcagatgcacacagcaatctgttggggtggagaaccagcttcagcacct 21414738

                                     
Query: 519      tgcatccattattcaggtgct 539
                ||| || || ||||| |||||
Sbjct: 21414737 tgcgtctatcattcaagtgct 21414717



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                            
Query: 5        ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
                ||||| ||||||||  ||| ||||| || ||||||||||| |||||| |||||||||| |
Sbjct: 21725718 ggaagcaagaatgcaaagatatggactcccatgttggtagcggtaaaattatcacagccc 21725659

                                                                            
Query: 65       cacttatcactgaggatggaagacctattaaagatcctttggttttacttgaggctactt 124
                || |||| ||||||||||||| ||||||||| |||||||||||||| || || |||||||
Sbjct: 21725658 caattataactgaggatggaaaacctattaaggatcctttggttttgctcgaagctactt 21725599

                       
Query: 125      caaacca 131
                || ||||
Sbjct: 21725598 cagacca 21725592



 Score =  111 bits (56), Expect = 2e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                            
Query: 369      aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
                |||||||||||||||||||||||||||||| ||||| ||||| || || |||||||| ||
Sbjct: 21725161 aggaatgagtgatttatgctcaccgatgatagtgctgctcaacgacgaagcagatgcatt 21725102

                                            
Query: 429      ttggtgctttgagaaattgatgcgtaga 456
                |||||||||||||| ||| |||||||||
Sbjct: 21725101 ttggtgctttgagagattaatgcgtaga 21725074



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                            
Query: 250      cttgacgtgctacgtactgaccgcaccatggtattttacgagaacaaggaaaatctttca 309
                ||||| ||||| || ||||| ||  ||||||| ||||| |||||||| ||||||||||| 
Sbjct: 21725367 cttgatgtgctgcgcactgatcgatccatggtgttttatgagaacaaagaaaatctttcg 21725308

                                                                            
Query: 310      aagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaa 369
                ||||||||||||||||| || || ||||| ||||| ||||||||  |||| || ||||||
Sbjct: 21725307 aagttatgggatattcttgctgtatatgcttggatcgacaaagaaattggctattgtcaa 21725248

                  
Query: 370      gg 371
                ||
Sbjct: 21725247 gg 21725246



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                            
Query: 459      gcgaggaaatttcagatgcacagatcaatcagtcggggttgctaaccaacttcagcacct 518
                |||||||||||||||||||||| | ||||| || ||||| |  ||||| |||||||||||
Sbjct: 21724996 gcgaggaaatttcagatgcacacagcaatctgttggggtggagaaccagcttcagcacct 21724937

                                     
Query: 519      tgcatccattattcaggtgct 539
                ||| || || ||||| |||||
Sbjct: 21724936 tgcgtctatcattcaagtgct 21724916



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>ref|NM_124859.3| Arabidopsis thaliana unknown protein AT5G54780 mRNA, complete cds
          Length = 1719

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 125/155 (80%)
 Strand = Plus / Plus

                                                                       
Query: 316 tgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaaggaatg 375
           ||||| ||||||||  | || |||||||| ||||| ||||||||||| || |||||||||
Sbjct: 763 tgggacattctagctctttacgcatggatagacaatgatgttggttattgccaaggaatg 822

                                                                       
Query: 376 agtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgttttggtgc 435
           |||||| | || || || |||||| |||| ||  | || || || ||||| |||||||| 
Sbjct: 823 agtgatctttgttcccctatgattatgcttcttgaggacgaagctgatgctttttggtgt 882

                                              
Query: 436 tttgagaaattgatgcgtagattgcgaggaaattt 470
           || || | |||||||||  |||||||||| |||||
Sbjct: 883 ttcgaaagattgatgcgccgattgcgagggaattt 917



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>gb|AY110194.1| Zea mays CL62128_1 mRNA sequence
          Length = 606

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 60/67 (89%), Gaps = 3/67 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaaggaagaatgccgagagatggattctcatgttggtagtggtaaagttatcacagcac 64
           |||| ||||| |||||| |||||||||||||||||||||| || ||||| || |||||||
Sbjct: 527 ggaaagaagattgccgacagatggattctcatgttggtagngg-aaagt-at-acagcac 583

                  
Query: 65  cacttat 71
           |||||||
Sbjct: 584 cacttat 590



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>ref|XM_468334.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1747

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 316 tgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaaggaatg 375
           ||||| ||||| || || ||| ||||| ||||||| ||  | ||||| ||||||||||||
Sbjct: 813 tgggacattcttgcagtttattcatgggttgacaaggacatcggttattgtcaaggaatg 872

                            
Query: 376 agtgatttatgctcacc 392
           |||||| | ||||||||
Sbjct: 873 agtgatctttgctcacc 889



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 421 gatgcgttttggtgctttgagaaattgatgcgtagattgcgaggaaatttc 471
           |||||||||||||||||||||  | | ||||| ||  ||||||||||||||
Sbjct: 918 gatgcgttttggtgctttgagcgacttatgcgcagggtgcgaggaaatttc 968



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>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence
          Length = 127640

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 307   tcaaagttatgggatattctagccgtgtatgcatggattgacaaagatgttggttactgt 366
             ||||| |||||||||||||| || || ||||| ||||| || ||||| ||||| ||| ||
Sbjct: 78585 tcaaaattatgggatattcttgcggtttatgcttggatagataaagaagttggatacggt 78526

                  
Query: 367   caagg 371
             |||||
Sbjct: 78525 caagg 78521



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                         
Query: 369   aggaatgagtgatttatgctcaccgatgattgtgctactcaatgatgaggcagatgcgtt 428
             ||||||||||||  ||||||| || |||||  | || ||  ||||||| ||||| || ||
Sbjct: 78196 aggaatgagtgacctatgctccccaatgataattcttcttgatgatgaagcagacgcatt 78137

                          
Query: 429   ttggtgctttgag 441
             |||||||||||||
Sbjct: 78136 ttggtgctttgag 78124



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>dbj|AK071602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102D17, full
           insert sequence
          Length = 1747

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 316 tgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaaggaatg 375
           ||||| ||||| || || ||| ||||| ||||||| ||  | ||||| ||||||||||||
Sbjct: 813 tgggacattcttgcagtttattcatgggttgacaaggacatcggttattgtcaaggaatg 872

                            
Query: 376 agtgatttatgctcacc 392
           |||||| | ||||||||
Sbjct: 873 agtgatctttgctcacc 889



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 421 gatgcgttttggtgctttgagaaattgatgcgtagattgcgaggaaatttc 471
           |||||||||||||||||||||  | | ||||| ||  ||||||||||||||
Sbjct: 918 gatgcgttttggtgctttgagcgacttatgcgcagggtgcgaggaaatttc 968



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>ref|NM_118844.2| Arabidopsis thaliana unknown protein AT4G27100 transcript variant
           AT4G27100.1 mRNA, complete cds
          Length = 1626

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 278 tggtattttacgagaacaaggaaaatctttcaaagttatgggatattctagccgtgtatg 337
           |||||||||| ||||| ||||| ||  | || ||| | |||||||||||  | || || |
Sbjct: 844 tggtattttatgagaaaaaggagaacttatcgaagctctgggatattctgtctgtttacg 903

                                                       
Query: 338 catggattgacaaagatgttggttactgtcaaggaatgagtgat 381
           | ||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 904 cctggatagacaacgatgtcgggtattgtcaaggaatgagtgat 947



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>ref|NM_001036653.1| Arabidopsis thaliana unknown protein AT4G27100 transcript variant
           AT4G27100.2 mRNA, complete cds
          Length = 1881

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 278 tggtattttacgagaacaaggaaaatctttcaaagttatgggatattctagccgtgtatg 337
           |||||||||| ||||| ||||| ||  | || ||| | |||||||||||  | || || |
Sbjct: 844 tggtattttatgagaaaaaggagaacttatcgaagctctgggatattctgtctgtttacg 903

                                                       
Query: 338 catggattgacaaagatgttggttactgtcaaggaatgagtgat 381
           | ||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 904 cctggatagacaacgatgtcgggtattgtcaaggaatgagtgat 947



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>ref|XM_660310.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40446)
           partial mRNA
          Length = 972

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 353 atgttggttactgtcaaggaatga 376
           ||||||||||||||||||||||||
Sbjct: 131 atgttggttactgtcaaggaatga 154



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>gb|AY142502.1| Arabidopsis thaliana unknown protein (At4g27100) mRNA, complete cds
          Length = 1342

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 278 tggtattttacgagaacaaggaaaatctttcaaagttatgggatattctagccgtgtatg 337
           |||||||||| ||||| ||||| ||  | || ||| | |||||||||||  | || || |
Sbjct: 560 tggtattttatgagaaaaaggagaacttatcgaagctctgggatattctgtctgtttacg 619

                                                       
Query: 338 catggattgacaaagatgttggttactgtcaaggaatgagtgat 381
           | ||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 620 cctggatagacaacgatgtcgggtattgtcaaggaatgagtgat 663



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>dbj|AK221621.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-93-E05
          Length = 1854

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 278 tggtattttacgagaacaaggaaaatctttcaaagttatgggatattctagccgtgtatg 337
           |||||||||| ||||| ||||| ||  | || ||| | |||||||||||  | || || |
Sbjct: 815 tggtattttatgagaaaaaggagaacttatcgaagctctgggatattctgtctgtttacg 874

                                                       
Query: 338 catggattgacaaagatgttggttactgtcaaggaatgagtgat 381
           | ||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 875 cctggatagacaacgatgtcgggtattgtcaaggaatgagtgat 918



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>ref|XM_549801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2055

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 412  gatgaggcagatgcgttttggtgctttgaga 442
            ||||| |||||||| ||||||||||||||||
Sbjct: 1345 gatgatgcagatgccttttggtgctttgaga 1375



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            complete sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 412  gatgaggcagatgcgttttggtgctttgaga 442
            ||||| |||||||| ||||||||||||||||
Sbjct: 7273 gatgatgcagatgccttttggtgctttgaga 7303



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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0672D08
          Length = 173729

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 412  gatgaggcagatgcgttttggtgctttgaga 442
            ||||| |||||||| ||||||||||||||||
Sbjct: 5075 gatgatgcagatgccttttggtgctttgaga 5105



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>dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            fosmid clone:OSJNOa264G09
          Length = 31687

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 412  gatgaggcagatgcgttttggtgctttgaga 442
            ||||| |||||||| ||||||||||||||||
Sbjct: 7273 gatgatgcagatgccttttggtgctttgaga 7303



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>gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, complete sequence
          Length = 188439

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 354   tgttggttactgtcaaggaatg 375
             ||||||||||||||||||||||
Sbjct: 73310 tgttggttactgtcaaggaatg 73331



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>ref|NM_123559.3| Arabidopsis thaliana unknown protein AT5G41940 mRNA, complete cds
          Length = 1818

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 356  ttggttactgtcaaggaatgag 377
            ||||||||||||||||||||||
Sbjct: 1125 ttggttactgtcaaggaatgag 1146



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>gb|AC102862.7| Mus musculus chromosome 8, clone RP24-535D22, complete sequence
          Length = 140264

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 354   tgttggttactgtcaaggaatg 375
             ||||||||||||||||||||||
Sbjct: 15100 tgttggttactgtcaaggaatg 15079



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>emb|BX842280.1|CNS0A086 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB41ZF03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1704

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 356  ttggttactgtcaaggaatgag 377
            ||||||||||||||||||||||
Sbjct: 1127 ttggttactgtcaaggaatgag 1148



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>dbj|AK176436.1| Arabidopsis thaliana mRNA for GTPase activator protein of Rab-like
            small GTPases-like protein, complete cds, clone:
            RAFL24-19-I05
          Length = 1744

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 356  ttggttactgtcaaggaatgag 377
            ||||||||||||||||||||||
Sbjct: 1146 ttggttactgtcaaggaatgag 1167



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>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20
          Length = 83689

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 356  ttggttactgtcaaggaatgag 377
            ||||||||||||||||||||||
Sbjct: 7116 ttggttactgtcaaggaatgag 7137



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>ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 mRNA, complete cds
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  tactgtcaaggaatgagtgat 381
            |||||||||||||||||||||
Sbjct: 1446 tactgtcaaggaatgagtgat 1466



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>emb|BX119904.4| Human DNA sequence from clone RP11-232D9 on chromosome X Contains two
              pseudogenes similar to part of solute carrier family 6
              (neurotransmitter transporter) member 14 (SLC6A14) and a
              novel gene, complete sequence
          Length = 178704

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 51     agttatcacagcaccacttat 71
              |||||||||||||||||||||
Sbjct: 137722 agttatcacagcaccacttat 137742



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>emb|AL591602.7| Human DNA sequence from clone RP5-1092E23 on chromosome 1 Contains part
              of the gene for a novel protein and a zinc finger protein
              pseudogene, complete sequence
          Length = 149988

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 51     agttatcacagcaccacttat 71
              |||||||||||||||||||||
Sbjct: 110326 agttatcacagcaccacttat 110306



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>gb|AC016885.16| Homo sapiens chromosome 8, clone RP11-388K12, complete sequence
          Length = 210008

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    ctagcagcaacaatggaattg 175
              |||||||||||||||||||||
Sbjct: 153469 ctagcagcaacaatggaattg 153449



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>gb|AC121251.2| Homo sapiens chromosome 3 clone RP11-143O1, complete sequence
          Length = 34533

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    agttatcacagcaccacttat 71
             |||||||||||||||||||||
Sbjct: 24008 agttatcacagcaccacttat 24028



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>gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 1653

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  tactgtcaaggaatgagtgat 381
            |||||||||||||||||||||
Sbjct: 1066 tactgtcaaggaatgagtgat 1086



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>ref|XM_688957.1| PREDICTED: Danio rerio similar to GH regulated TBC protein 1
           (LOC565690), mRNA
          Length = 1182

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 352 gatgttggttactgtcaaggaatga 376
           ||||||||||||||||| |||||||
Sbjct: 952 gatgttggttactgtcagggaatga 976



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>ref|XM_688708.1| PREDICTED: Danio rerio similar to GH regulated TBC protein 1
           (LOC573452), mRNA
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 352 gatgttggttactgtcaaggaatga 376
           ||||||||||||||||| |||||||
Sbjct: 484 gatgttggttactgtcagggaatga 508



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>dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator protein of Rab-like
           small GTPases-like protein, partial cds, clone:
           RAFL22-33-M06
          Length = 1275

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 tactgtcaaggaatgagtgat 381
           |||||||||||||||||||||
Sbjct: 359 tactgtcaaggaatgagtgat 379



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>gb|AC158361.3| Mus musculus BAC clone RP23-227A12 from chromosome 3, complete sequence
          Length = 211804

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 220   gagtggaagcttacattacat 240
             |||||||||||||||||||||
Sbjct: 76875 gagtggaagcttacattacat 76855



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>gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 2273

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  tactgtcaaggaatgagtgat 381
            |||||||||||||||||||||
Sbjct: 1445 tactgtcaaggaatgagtgat 1465



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 421      gatgcgttttggtgctttgag 441
                |||||||||||||||||||||
Sbjct: 34674960 gatgcgttttggtgctttgag 34674980



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>emb|BX831263.1|CNS0A1Q7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZG10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2258

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  tactgtcaaggaatgagtgat 381
            |||||||||||||||||||||
Sbjct: 1388 tactgtcaaggaatgagtgat 1408



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>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_E04
          Length = 94096

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   gatgcgttttggtgctttgag 441
             |||||||||||||||||||||
Sbjct: 31911 gatgcgttttggtgctttgag 31931



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>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete
             sequence
          Length = 115038

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   aaagatgttggttactgtcaa 369
             |||||||||||||||||||||
Sbjct: 98220 aaagatgttggttactgtcaa 98240



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>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 361   tactgtcaaggaatgagtgat 381
             |||||||||||||||||||||
Sbjct: 47744 tactgtcaaggaatgagtgat 47724



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>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence
          Length = 162197

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 419   cagatgcgttttggtgctttgagaa 443
             |||||| ||||||||||||||||||
Sbjct: 24986 cagatgagttttggtgctttgagaa 25010



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>gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosome 3, complete sequence
          Length = 196177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 419   cagatgcgttttggtgctttgagaa 443
             |||||| ||||||||||||||||||
Sbjct: 69666 cagatgagttttggtgctttgagaa 69642



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>emb|AL928846.4| Human DNA sequence from clone RP11-9I7 on chromosome 9, complete
             sequence
          Length = 146621

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   ctagcagcaacaatggaattg 175
             |||||||||||||||||||||
Sbjct: 85441 ctagcagcaacaatggaattg 85461



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>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete
             sequence
          Length = 81776

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   aaagatgttggttactgtcaa 369
             |||||||||||||||||||||
Sbjct: 64958 aaagatgttggttactgtcaa 64978



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>ref|NM_129910.1| Arabidopsis thaliana unknown protein AT2G43490 mRNA, complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 357  tggttactgtcaaggaatgagtgattta 384
            |||||| || ||||||||||||||||||
Sbjct: 1197 tggttattgccaaggaatgagtgattta 1224



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>ref|NM_201567.1| Homo sapiens cell division cycle 25A (CDC25A), transcript variant
           2, mRNA
          Length = 3597

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gagaacaaggaaaatctttc 308
           ||||||||||||||||||||
Sbjct: 779 gagaacaaggaaaatctttc 798



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>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     gatggaagacctattaaagatcct 102
              |||| |||||||||||||||||||
Sbjct: 648111 gatgtaagacctattaaagatcct 648088



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>ref|XM_598423.2| PREDICTED: Bos taurus similar to cell division cycle 25A isoform a,
           transcript variant 1 (LOC520188), mRNA
          Length = 1496

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gagaacaaggaaaatctttc 308
           ||||||||||||||||||||
Sbjct: 412 gagaacaaggaaaatctttc 431



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>gb|AY429356.1| Arabidopsis thaliana At2g43490 mRNA, partial sequence,
           alternatively spliced
          Length = 1810

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 357 tggttactgtcaaggaatgagtgattta 384
           |||||| || ||||||||||||||||||
Sbjct: 267 tggttattgccaaggaatgagtgattta 294



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>gb|AY429355.1| Arabidopsis thaliana At2g43490 mRNA, partial sequence
          Length = 1816

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 357 tggttactgtcaaggaatgagtgattta 384
           |||||| || ||||||||||||||||||
Sbjct: 267 tggttattgccaaggaatgagtgattta 294



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>emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in linkage group 14,
            complete sequence
          Length = 262688

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  ggaatgagtgatttatgctc 389
            ||||||||||||||||||||
Sbjct: 2075 ggaatgagtgatttatgctc 2056



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>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence
          Length = 190309

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    aggctacttcaaaccaaaacacct 139
              |||||||||||||||||| |||||
Sbjct: 159474 aggctacttcaaaccaaatcacct 159451



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>gb|AC122012.3| Mus musculus BAC clone RP24-353N4 from 5, complete sequence
          Length = 188867

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    tcaaggaatgagtgatttat 385
              ||||||||||||||||||||
Sbjct: 147144 tcaaggaatgagtgatttat 147125



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>gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, complete sequence
          Length = 91573

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   ttcagcaccttgcatccatt 528
             ||||||||||||||||||||
Sbjct: 27779 ttcagcaccttgcatccatt 27798



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>ref|XM_662772.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40223)
           partial mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 352 gatgttggttactgtcaaggaatg 375
           |||||||||||||| |||||||||
Sbjct: 583 gatgttggttactgccaaggaatg 606



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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   ttcagcaccttgcatccatt 528
             ||||||||||||||||||||
Sbjct: 95792 ttcagcaccttgcatccatt 95773



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>emb|AL139384.17| Human DNA sequence from clone RP11-88E10 on chromosome 13q33.1-34
              Contains the 5' end of the ATP11A gene for Class VI ATPase
              type IIA, a novel gene, the 5' end of the TUBGCP3 gene for
              tubulin gamma complex associated protein 3 and two CpG
              islands, complete sequence
          Length = 187157

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    ggtgcttcaactagcagcaa 164
              ||||||||||||||||||||
Sbjct: 160493 ggtgcttcaactagcagcaa 160512



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>gb|AY137580.1| Homo sapiens cell division cycle protein 25A splice variant 2
           (CDC25A) mRNA, complete cds; alternatively spliced
          Length = 1455

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gagaacaaggaaaatctttc 308
           ||||||||||||||||||||
Sbjct: 415 gagaacaaggaaaatctttc 434



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>emb|BX571863.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              5/17
          Length = 349318

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    cagcaacaatggaattgaag 178
              ||||||||||||||||||||
Sbjct: 136712 cagcaacaatggaattgaag 136693



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>emb|AJ235272.1|RPXX03 Rickettsia prowazekii strain Madrid E, complete genome; segment 3/4
          Length = 279110

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    gatggaagacctattaaagatcct 102
             |||| |||||||||||||||||||
Sbjct: 49514 gatgtaagacctattaaagatcct 49491



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>gb|DQ445142.1| Beta vulgaris chromosome 9 clone BAC123 genomic sequence
          Length = 31403

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   cttcaaaccaaaacacctca 141
             ||||||||||||||||||||
Sbjct: 22556 cttcaaaccaaaacacctca 22537



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>gb|AC160143.4| Pan troglodytes BAC clone CH251-565M18 from chromosome unknown,
             complete sequence
          Length = 212611

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   ggtgcttcaactagcagcaa 164
             ||||||||||||||||||||
Sbjct: 69086 ggtgcttcaactagcagcaa 69067



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>gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, complete sequence
          Length = 181925

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    aatctttcaaagttatggga 320
              ||||||||||||||||||||
Sbjct: 167316 aatctttcaaagttatggga 167297



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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 451     cgtagattgcgaggaaatttcaga 474
               |||||||||||| |||||||||||
Sbjct: 2562020 cgtagattgcgaagaaatttcaga 2561997



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>ref|XM_625792.1| Cryptosporidium parvum Iowa II TBC domain containing protein
           (cgd4_1980), partial mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 352 gatgttggttactgtcaaggaatg 375
           |||||||||||||| |||||||||
Sbjct: 583 gatgttggttactgccaaggaatg 606



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>gb|AF212831.2|AF212831 Homo sapiens chromosome 21 clone BAC R-45M19 map 21q21, complete
             sequence
          Length = 159255

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    catgttggtagtggtaaagt 53
             ||||||||||||||||||||
Sbjct: 88889 catgttggtagtggtaaagt 88908



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 358      ggttactgtcaaggaatgagtgat 381
                |||||||||||||| |||||||||
Sbjct: 20415929 ggttactgtcaaggtatgagtgat 20415906



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>gb|AF277722.1|AF277722 Homo sapiens cell division cycle 25A splice variant 2 (CDC25A)
           mRNA, partial cds
          Length = 474

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gagaacaaggaaaatctttc 308
           ||||||||||||||||||||
Sbjct: 307 gagaacaaggaaaatctttc 326



to top

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 358   ggttactgtcaaggaatgagtgat 381
             |||||||||||||| |||||||||
Sbjct: 44068 ggttactgtcaaggtatgagtgat 44045



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>dbj|BS000031.1| Pan troglodytes chromosome 22 clone:PTB-082B23, map 22, complete
             sequences
          Length = 218696

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    catgttggtagtggtaaagt 53
             ||||||||||||||||||||
Sbjct: 90642 catgttggtagtggtaaagt 90661



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>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8
          Length = 80315

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 316  tgggatattctagccgtgtatgcatggattgacaaagatgttggttactgtcaagg 371
            ||||| ||||||||  | || |||||||| ||||| ||||||||||| || |||||
Sbjct: 8974 tgggacattctagctctttacgcatggatagacaatgatgttggttattgccaagg 8919



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>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
            insert sequence
          Length = 2098

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 358  ggttactgtcaaggaatgagtgat 381
            |||||||||||||| |||||||||
Sbjct: 1187 ggttactgtcaaggtatgagtgat 1210



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>emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     catgttggtagtggtaaagt 53
              ||||||||||||||||||||
Sbjct: 249555 catgttggtagtggtaaagt 249574



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>gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, complete sequence
          Length = 197405

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    aggctacttcaaaccaaaacacct 139
              |||||||||||||||||| |||||
Sbjct: 115027 aggctacttcaaaccaaatcacct 115050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,848,367
Number of Sequences: 3902068
Number of extensions: 4848367
Number of successful extensions: 85417
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85120
Number of HSP's gapped (non-prelim): 293
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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